TBGR-Browse-Bna-SINE.SINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffoldC03_SINE_41	Retrotransposons	SINE	SINE	161	25102938	25103098	-
scaffoldC03_SINE_42	Retrotransposons	SINE	SINE	150	29147100	29147249	+
scaffoldC03_SINE_43	Retrotransposons	SINE	SINE	101	39220031	39220131	-
scaffoldC03_SINE_44	Retrotransposons	SINE	SINE	162	40474391	40474552	-
scaffoldC03_SINE_45	Retrotransposons	SINE	SINE	159	60839848	60840006	-
scaffoldC03_SINE_46	Retrotransposons	SINE	SINE	156	67314130	67314285	-
scaffoldC03_SINE_47	Retrotransposons	SINE	SINE	119	67314285	67314403	-
scaffoldC03_SINE_48	Retrotransposons	SINE	SINE	154	68340013	68340166	-
scaffoldC03_SINE_49	Retrotransposons	SINE	SINE	157	71117601	71117757	-
scaffoldC03_SINE_50	Retrotransposons	SINE	SINE	159	72000886	72001044	-
scaffoldC03_SINE_51	Retrotransposons	SINE	SINE	159	72847844	72848002	+
scaffoldC03_SINE_52	Retrotransposons	SINE	SINE	160	77816434	77816593	-
scaffoldC04_SINE_53	Retrotransposons	SINE	SINE	160	5361529	5361688	-
scaffoldC04_SINE_54	Retrotransposons	SINE	SINE	171	6255698	6255868	-
scaffoldC04_SINE_55	Retrotransposons	SINE	SINE	99	8778265	8778363	-
scaffoldC04_SINE_56	Retrotransposons	SINE	SINE	153	10397557	10397709	+
scaffoldC04_SINE_57	Retrotransposons	SINE	SINE	159	13734317	13734475	+
scaffoldC04_SINE_58	Retrotransposons	SINE	SINE	99	14220248	14220346	-
scaffoldC04_SINE_59	Retrotransposons	SINE	SINE	170	16824232	16824401	-
scaffoldC04_SINE_60	Retrotransposons	SINE	SINE	159	18028160	18028318	-

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_41

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

161

Start:

25102938

End:

25103098

Strand:

-

>scaffoldC03_SINE_41

GTTTAACCAGGTGTTGATCAACCTTCGGCCAGCCCACCACCTAGGCCCAGCGCCAACCTTTGCCTGTACTGGTTAGGGCCCTGGGCACGCCTCCCCATCCTGCGAATCGAACAGCTGACCTCCCCAAGAGGTAGATACCACTGGACTATCGAGTCCGGGTA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_42

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

150

Start:

29147100

End:

29147249

Strand:

+

>scaffoldC03_SINE_42

ACCCAGGACCACGTAGTCCAGTGGTATCCTCCTTGGGAAGGGGAGGTGACCGGTTCGACTCGCGGAGAGAAGGAGACGTGTCCAGAACCCGTAAAAAGGTACAGACAAAGGCTGGCGCCGGGCCTAGGTGGTGGGCCGCAAAGTCAACAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_43

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

39220031

End:

39220131

Strand:

-

>scaffoldC03_SINE_43

GTTTAACCAGGTGGTGGGTTCGGGCCTTCGGCCCTACTCCCTCCCCCTAGGCCCGGAGCCAGCCTGCGTCTGTACCGGTTAAGGCCCTGGACACTCCTCCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_44

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

162

Start:

40474391

End:

40474552

Strand:

-

>scaffoldC03_SINE_44

GATTAACCAGGTGTTGACCTTGCGACCCCCCACCTAGGCCCGGCGCCACCCTTTATCTGTACCTTGTTACGGGCCCTGGACACACCTCCTCCTCCCCGCGAGTCGAACAGCCGACCTCCCCTCCCCAAGGAAGTAGTACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_45

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

60839848

End:

60840006

Strand:

-

>scaffoldC03_SINE_45

TTAACCAGGTGTTGACCTTACGGCCCACCACCTAGGCCCGGCGCCAGCCTTTGTCTGTACCTTCTTACGGGCCCTGGACACGCCTCCCCCTCCCCGCGAGTCGAACTGGCCACCTCCCCTCCCCAAGGAGGATGATACCACTGGACTACGAGGCCCTGG

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_46

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

156

Start:

67314130

End:

67314285

Strand:

-

>scaffoldC03_SINE_46

GATTAACCAGGTGTTGACTTTGTGGTCCACCACCTAGGCCCAGCGCCAGCCTTTGCCTGTACCTTTTTACGGGTCCTGGACACGCCTCCCCCTCCCCGCGAGTCGAACAGCCGACCTCCCCTCCCTAAGGAGGTAGTACCACTAGACTACGAGGTC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_47

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

119

Start:

67314285

End:

67314403

Strand:

-

>scaffoldC03_SINE_47

CGCCAGCCTTTGCCTGTACCTTTTTACGGGTCCTGGACACGCCTCCCCCTCCCCGCGAGTCGAACAGCCGACCTCCCCTCCCTAAGGAGGTAGTACCACTAGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_48

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

154

Start:

68340013

End:

68340166

Strand:

-

>scaffoldC03_SINE_48

TTAACCAGGTGTTGACCTTGCGGCCCACCACCTAGGTCCGGCGCCAGCCTTCGTCTGGGCCTTGCGGTCCTGGACACGCCTCCCCCTCCCCGCAAGTCGAACAGCCTACCTCCCAGCCCCCTAAGAGGCAGTACCACTGAACTACGAGGTCCTG

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_49

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

157

Start:

71117601

End:

71117757

Strand:

-

>scaffoldC03_SINE_49

TTAACCAGGTGTTGACCTTGCGGTCCACCACCTAGGCCCGGCGCCAGTCTTCGTTTGGGTCTTGCGGTCCTGGACACGCCTCCCCCTCCCCGCAAGTCGAACAGCCTACTTTCCAGCCCCCTAAGAGGCAGTACCGCTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_50

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

72000886

End:

72001044

Strand:

-

>scaffoldC03_SINE_50

ATTAACCAGGTGTTGACCTTGCGGCCCACCACCTAGGCTCGGCGCCAGCCTTTGTCTGTACCTTCTTACGGGCCCTGGACACGCCTCCCCCTCCCCGCGAGTCGAACCGGTCACCTCCCCTCCCCAAGGAGGATACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_51

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

72847844

End:

72848002

Strand:

+

>scaffoldC03_SINE_51

ACCCAGAACCTCGTAGTCCAGTGGTACTACCTCCGGGAGGGGAGGTCGGCTGTTCGACTCGCGGGGAGGGGGAGGCGTGCCCAGGGCCCGTAAAAAGGTACAGGCAAAGGCTGGCGCCGGGCCTAGGTGGGGGGCCGCAAGGTCAACACCTGGTTAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC03_SINE_52

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

160

Start:

77816434

End:

77816593

Strand:

-

>scaffoldC03_SINE_52

TTAACCAGGTATTGACCTTGCGGTCCACCACCTAGGTCCGGCGCCAGCCTTTATCTGTACCTTTTTACGGGTTCTGTACACGCCTCCCCCTCCACGCGAGTCGAACATCCGACCTCTCCTCCCCAAGGAGGTAGTACCACTAGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_53

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

160

Start:

5361529

End:

5361688

Strand:

-

>scaffoldC04_SINE_53

TTAACCAGGTGTTGACCTTGCGGCTCACCACCTAGGCCCGGCGCCAGTCTTTATCTGTACCTTTTTACGGGTCCTGGACACACCTCCTCCGCCACGCGAATCGAACAGCCGACCTCCCCTTCCCAAGGAGATAGTACCACTGGACTACGAGGTCCTTAGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_54

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

171

Start:

6255698

End:

6255868

Strand:

-

>scaffoldC04_SINE_54

TTTAACCAGGTGTTGACCAGCCTTCGACCAGCCCACCACCTAGGCCCGGCGCCAGCCTGTGCCTGTACCGGTTAGGGCCCTGGGCACGCCTCCCCCTCCCCGCGAGTCGAACAGCCGACCTCCCCTCCCCAAAGAGAAGGTAGTACCACTGGATTACGAGGTCCTGGGTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_55

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

99

Start:

8778265

End:

8778363

Strand:

-

>scaffoldC04_SINE_55

TTAACCAGGTGGAGGGTTCGGGCCTTCGGCCCTACTCCCTCCCCCTAGGCCCGGAGCCAGCCTGCGTCTGTACCGGTTAAGGCCCTGGACACTCCTTCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_56

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

153

Start:

10397557

End:

10397709

Strand:

+

>scaffoldC04_SINE_56

ACCCGGACTCGATAGTCCAGTGGTATCTGCCCATTGGGGAGGTCAGCTGTTCGATTCGCAGGGCGGGGAGGCGTGCCCAGGGCCCCTGTGGGTACAGGCAAAGGCTGGCGCCGGGCCTAGGTGGGGGGCCGCAAGGTCAACACCTGGTAAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_57

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

13734317

End:

13734475

Strand:

+

>scaffoldC04_SINE_57

ACCCAGGACCTCGTAGTCCAGCGGTATCCTCCTTGGAGAGGGGAGGTGACCGGTTCGACTCGCGGGGAGGGGGAGGCGTGTCCAGGGCCCGTAAGAAGGTACAGACAAAGGCTGGCGCCGGGCCTAGGTGGTGGGCCGCAAGGTCAACACCTGGTTAAT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_58

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

99

Start:

14220248

End:

14220346

Strand:

-

>scaffoldC04_SINE_58

TTTAACCAGGTGGTGGGTTCGGGCCTTCGGCCCTACTCCCTCCCCCTAGGCCCGGAGCCAGCCTGTGTCTGTACCGGTAAGGCCCTAGACACTCCTCCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_59

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

170

Start:

16824232

End:

16824401

Strand:

-

>scaffoldC04_SINE_59

GTTTACCAGGCGGGGTTCGGGCCTTCGGCCCTAATCCCCTCCTAGGCCCGGAGCCAGCCTGCGCCTGTACCATTACGGCCCTGGACACTCCTCCCCGCCCGAAACTCGAACTCGTGACCTCTCAGACCGGAGTCTGAGGTGTTACCAGTTGAGCTAGCTCGTCCGGGTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_60

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

18028160

End:

18028318

Strand:

-

>scaffoldC04_SINE_60

ATTAACCAGGTGTTGACCTTGCGGCCCACCACCTAGGCCCGGCGCCAGCCTTTGTCTGTACCTTCTTACGGGCCCTGGACACACCTCCCCCTCCCCGCAAGTCGAACCGGTCACCTCCCCTCCCCAAAGAGGATACCACTGGACTACGAGGTCCTGGGT