ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Pao_41 RetrotransposonsLTRLTR-Pao2103963351539633724-
ChrB01_LTR-Pao_42 RetrotransposonsLTRLTR-Pao2274424552244245748-
ChrB01_LTR-Pao_43 RetrotransposonsLTRLTR-Pao2274424575044245976-
ChrB01_LTR-Pao_44 RetrotransposonsLTRLTR-Pao2274424597844246204-
ChrB01_LTR-Pao_45 RetrotransposonsLTRLTR-Pao2274424620644246432-
ChrB01_LTR-Pao_46 RetrotransposonsLTRLTR-Pao2304424643444246663-
ChrB01_LTR-Pao_47 RetrotransposonsLTRLTR-Pao2204619847446198693-
ChrB01_LTR-Pao_48 RetrotransposonsLTRLTR-Pao2295166294951663177-
ChrB01_LTR-Pao_49 RetrotransposonsLTRLTR-Pao2035657614756576349+
ChrB01_LTR-Pao_50 RetrotransposonsLTRLTR-Pao1465657664256576787+
ChrB01_LTR-Pao_51 RetrotransposonsLTRLTR-Pao2275657680756577033+
ChrB01_LTR-Pao_52 RetrotransposonsLTRLTR-Pao2035659568056595882+
ChrB01_LTR-Pao_53 RetrotransposonsLTRLTR-Pao1695659590556596073+
ChrB01_LTR-Pao_54 RetrotransposonsLTRLTR-Pao1605659638656596545+
ChrB01_LTR-Pao_55 RetrotransposonsLTRLTR-Pao895724465157244739-
ChrB01_LTR-Pao_56 RetrotransposonsLTRLTR-Pao1085724481357244920-
ChrB01_LTR-Pao_57 RetrotransposonsLTRLTR-Pao1385752360057523737-
ChrB02_LTR-Pao_58 RetrotransposonsLTRLTR-Pao12273752447375365-
ChrB02_LTR-Pao_59 RetrotransposonsLTRLTR-Pao12373771067377228-
ChrB02_LTR-Pao_60 RetrotransposonsLTRLTR-Pao12273788327378953-

< 3 4 5 6 7 > Total 15


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

210

Start:

39633515  

End:

39633724

Strand:

-

>ChrB01_LTR-Pao_41

ACCAAGTGCAGAACTGAATCTTTTTGGATATTGTAATCAGCCATGGTACGGTGATCCTCCATCTGATTTCCGTCAAAAATAAGCCTCTGCTTGTTTCTAGAGACTCCTTCCTTTATATGTACCCTTGCCTTGACGTGGCTAATGGTGCTTGAGCTTCGGACGTAAAGAGTTATGGTCTTGTTTGTAAGAGTCTTCACGAAGATTCGCATC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

44245522  

End:

44245748

Strand:

-

>ChrB01_LTR-Pao_42

CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCAACTTCAAGTGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

44245750  

End:

44245976

Strand:

-

>ChrB01_LTR-Pao_43

CCACCACGAAGCCTGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCTAGAGTGATCGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

44245978  

End:

44246204

Strand:

-

>ChrB01_LTR-Pao_44

CCACCACGTAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATGGTATCGGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

44246206  

End:

44246432

Strand:

-

>ChrB01_LTR-Pao_45

CCACCACGGAGCCTGAGAACGAGATGTAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATTTGCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

230

Start:

44246434  

End:

44246663

Strand:

-

>ChrB01_LTR-Pao_46

CCACCACGAAGCCTGAGGACCAAGTGGAGGGTCGATTCCTTCTGGATATTGTAATCAGCAAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATCTG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

220

Start:

46198474  

End:

46198693

Strand:

-

>ChrB01_LTR-Pao_47

AGACGGAGCACCAGGTGAAGCGTCGACTTCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCTGTCTTTCAGCTGCTTCTCGGTGAAGATCAGTCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGATTATCGTCTTTCCTGTTAGGGTTTTCACAGAGATCTGCATTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

229

Start:

51662949  

End:

51663177

Strand:

-

>ChrB01_LTR-Pao_48

CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTCTTCACGAAGATCTGCATCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

203

Start:

56576147  

End:

56576349

Strand:

+

>ChrB01_LTR-Pao_49

ATGGAAATCTTTATCAAAACTCTCTCAGGGAGAACCTTATTCACACTCGAAGTTGAAAGCTCCGACACTGTCGACAGTGTCAAGGAAAAGATACAGGACAAGGTAGGAATTCCTCCAGACCATCTGAGTCTAACCTTCGCCGGTGAGCTGCTCATCGCTAGCCGCACCTTGGATTATTACGACATCCATGATAAATCAACTCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

146

Start:

56576642  

End:

56576787

Strand:

+

>ChrB01_LTR-Pao_50

TCCGACAGCATTGACAATGTCAAGGCAAAGATACGTGACGAGGTAGGAGTGCCTCATGACCAGCAAACTCTAATCCATGAAGGTGAGATGCTCGAGGATGGCCGCTGCACCTTGGCTGATTACCAAATCCGGATGGAGTCGACCCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

56576807  

End:

56577033

Strand:

+

>ChrB01_LTR-Pao_51

ATGCAGATCTATATCAAAACCCTGACAGGTAAAGTCTTTCCCCTCTCTGTCGAAAGCTCGAAAACCATTTACGATGTCATGGAAAAGATAAGTGACAAGAAAAGAATTCCTTCTTCCATGCAAAGGTTAGTCTATAATGGTCAACATCTACGGTATGGCCGCACCTTAGCTTCTTACAACGTCCAGAAGGAATCAACTCTGTTCCTGGCATTACAGTCCAGAGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

203

Start:

56595680  

End:

56595882

Strand:

+

>ChrB01_LTR-Pao_52

ATGCAGATCTTTGTCAAGACTCTCTCAGGGAGAACCTTCTTCACACTCGAAGTTGAAAGCTCCGACACCGTCGACGGTGTCAAGGAAAAGATTCAGGACAAGGTAGGAATTCATCCAGACCATCTGAGTCTAACCTTTGCCGGTGAGCTGCTCATTGCTAGCCGCACGTTGGATTATTATGACATCCATGATAAGTCAACTCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

169

Start:

56595905  

End:

56596073

Strand:

+

>ChrB01_LTR-Pao_53

CAGATCTCTGTCAATATTCGGCAACCGAAAAAGTTCGACTTCAAGTTTGAAATCTCCGACACCGTTGATAGTGTCAAGGCAAAGATACAGGCCGTGGCAGACGTTCCTCCTCGCCAGCAAAAACTATTCTATGAAGATGAACTGCTTACGGGCGACCGTAGGTTGGCTG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

160

Start:

56596386  

End:

56596545

Strand:

+

>ChrB01_LTR-Pao_54

CCCTCTATGTTGAAAGTTCGAACACCATTGACGATGTCAAGGAAAAGATAAGTCTCGAGGAAGGAACTCCTCCTTTCAAGCAAAGGTTAATCTTTGAAGGTCGACAGCTAGAGGATGGCCGGACCTTAGCTGATTACAACGTCCAGAAGGAATCAATTCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

89

Start:

57244651  

End:

57244739

Strand:

-

>ChrB01_LTR-Pao_55

CTTTCTGGATGTTATAGTCAGCCAAGGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGGATTCCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

108

Start:

57244813  

End:

57244920

Strand:

-

>ChrB01_LTR-Pao_56

TACCTTCTTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGCGTTTTCACGAAAATCTGCATCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

138

Start:

57523600  

End:

57523737

Strand:

-

>ChrB01_LTR-Pao_57

CCGCCTCTGAGAATCTCAAGACGAGATGAAGAATAGTTCTTTCTGGATGTTGTAGTCCGCTAGGTGTTTGGCCGTATTCAAGCTGCTTACCGGCAAATATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTGTCCT

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Pao_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

122

Start:

7375244  

End:

7375365

Strand:

-

>ChrB02_LTR-Pao_58

CCACCACGGAGGCGGAGGAGAACATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCTTCCACCTGTTTCCCGGAAAAGATCAGTCGCTGCTGGTCCGGTGGGAT

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Pao_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

123

Start:

7377106  

End:

7377228

Strand:

-

>ChrB02_LTR-Pao_59

CCACCACGGAGGCGGAGGAGAACATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCTTCCACCTGTTTCCCGGGAAAAGATCAGTCGCTGCTGGTCCGGTGGGAT

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Pao_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

122

Start:

7378832  

End:

7378953

Strand:

-

>ChrB02_LTR-Pao_60

CCACCACGGAGGCGGAGGAGAACATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCTTCCACCTGTTTCCCGGGAAAGATCAGTCGCTGCTGGTCCGGTGGGAT