ID Class Order Superfamily Length Start End Strand View
Contig1573_LTR-Pao_21 RetrotransposonsLTRLTR-Pao883230432391+
Contig1573_LTR-Pao_22 RetrotransposonsLTRLTR-Pao883304533132+
Contig3367_LTR-Pao_23 RetrotransposonsLTRLTR-Pao8722932379-
ChrB01_LTR-Pao_24 RetrotransposonsLTRLTR-Pao10124200382420138-
ChrB01_LTR-Pao_25 RetrotransposonsLTRLTR-Pao10824202172420324-
ChrB01_LTR-Pao_26 RetrotransposonsLTRLTR-Pao2293775952337759751+
ChrB01_LTR-Pao_27 RetrotransposonsLTRLTR-Pao1973775978337759979+
ChrB01_LTR-Pao_28 RetrotransposonsLTRLTR-Pao2283775998037760207+
ChrB01_LTR-Pao_29 RetrotransposonsLTRLTR-Pao2273776020937760435+
ChrB01_LTR-Pao_30 RetrotransposonsLTRLTR-Pao2273776043737760663+
ChrB01_LTR-Pao_31 RetrotransposonsLTRLTR-Pao2303780856637808795+
ChrB01_LTR-Pao_32 RetrotransposonsLTRLTR-Pao2273780879737809023+
ChrB01_LTR-Pao_33 RetrotransposonsLTRLTR-Pao2273780902537809251+
ChrB01_LTR-Pao_34 RetrotransposonsLTRLTR-Pao2273780925537809481+
ChrB01_LTR-Pao_35 RetrotransposonsLTRLTR-Pao2233817974438179966+
ChrB01_LTR-Pao_36 RetrotransposonsLTRLTR-Pao2273817996838180194+
ChrB01_LTR-Pao_37 RetrotransposonsLTRLTR-Pao1493963264239632790-
ChrB01_LTR-Pao_38 RetrotransposonsLTRLTR-Pao2173963282339633039-
ChrB01_LTR-Pao_39 RetrotransposonsLTRLTR-Pao1823963305639633237-
ChrB01_LTR-Pao_40 RetrotransposonsLTRLTR-Pao1523963331439633465-

< 2 3 4 5 6 > Total 15


Brassica carinata (v1.0)

ID:

Contig1573_LTR-Pao_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

88

Start:

32304  

End:

32391

Strand:

+

>Contig1573_LTR-Pao_21

CCAAAACCGAAGTTTTCCGCCAAAACCGAAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAATCGCAAAA

Brassica carinata (v1.0)

ID:

Contig1573_LTR-Pao_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

88

Start:

33045  

End:

33132

Strand:

+

>Contig1573_LTR-Pao_22

CCAAAACCGAAGTTTTCCGCCAAAACCGAAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAATCGCAAAA

Brassica carinata (v1.0)

ID:

Contig3367_LTR-Pao_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

87

Start:

2293  

End:

2379

Strand:

-

>Contig3367_LTR-Pao_23

TTACTACTACGCTCTCTAGAACAAACGTAGTGATCAAGCGATGCTGCGTTGTTGTAGTTTGGTACCTTTCAAAGCTTTCTTTTGAGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

101

Start:

2420038  

End:

2420138

Strand:

-

>ChrB01_LTR-Pao_24

TAAAGATTAGACCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGTTTCCCGGCGAAGATCAGTCTCTGCTGGTCCGGAGGGATTCCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

108

Start:

2420217  

End:

2420324

Strand:

-

>ChrB01_LTR-Pao_25

TACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAGATCTGCATCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

229

Start:

37759523  

End:

37759751

Strand:

+

>ChrB01_LTR-Pao_26

AGATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCCGACACCATCGATAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCAGAACCCTCGCTGATTACAATATCCAGAAGGAGTCAACCCTTCATCTCGTCCTCAGGCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

197

Start:

37759783  

End:

37759979

Strand:

+

>ChrB01_LTR-Pao_27

AAGACGATCACCCTTGAAGTGGAGAGTTCTGACACCATTGATAACGTGAAGGCTAAGATTCAAGATAAGGAGGGAATCCCACCGGATCAGCAGAGGCTTATCTTCGCCGGAAAGCAACTTGAAGATGGCAGAACTCTCGCTGACTACAACATCCAAAAGGAGTCGACTTTGCATCTTGTCCTCAGGCTTCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

228

Start:

37759980  

End:

37760207

Strand:

+

>ChrB01_LTR-Pao_28

GATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGCTCCGACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAAGAGGGTATCCCTCCGGACCAGCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGAAGAACTCTTGCTGACTACAACATTCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTACGTGGAGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

37760209  

End:

37760435

Strand:

+

>ChrB01_LTR-Pao_29

ATGCAGATCTTTGTTAAGACACTGACCGGGAAGACCATCACTCTAGAGGTGGAGAGCTCCGACACTATTGACAACGTGAAGGCCAAAATCCAAGACAAGGAGGGGATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGTCGCACCCTTGCCGACTACAACATTCAGAAGGAGTCCACTCTTCATTTGGTGTTGCGTCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

37760437  

End:

37760663

Strand:

+

>ChrB01_LTR-Pao_30

ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACCATCACACTGGAGGTGGAGAGCTCGGACACCATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGGATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACCCTTGCCGACTACAACATCCAGAAGGAGTCAACTCTTCACTTGGTGTTGCGTCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

230

Start:

37808566  

End:

37808795

Strand:

+

>ChrB01_LTR-Pao_31

CAGATGCAGATATTCGTTAAGACTCTCACAGGAAAGACAATCACCCTCGAGGTGGAAAGCTCTGACACCATCGACAACGTTAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAGCAGAGGCTTATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCAGATTACAACATTCAGAAGGAGTCTACTCTCCACTTGGTTCTCAGGCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

37808797  

End:

37809023

Strand:

+

>ChrB01_LTR-Pao_32

ATGCAGATCTTTGTCAAAACCCTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGCTCCGATACCATCGACAATGTTAAAGCCAAGATACAAGACAAGGAAGGTATTCCTCCGGACCAGCAGCGTTTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGTACTCTAGCTGACTACAACATTCAAAAGGAGTCAAATTTGCATCTCGTTCTCAGGCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

37809025  

End:

37809251

Strand:

+

>ChrB01_LTR-Pao_33

ATGCAAATTTTCGTGAAGACCCTGACTGGAAAAACTATTACCTTGGAGGTGGAGAGCTCCGATACTATTGACAACGTCAAAGCTAAGATCCAAGACAAGGAAGGCATTCCTCCAGACCAGCAGAGACTCATCTTTGCCGGAAAGCAGCTAGAGGACGGCAGAACACTGGCTGATTACAACATTCAGAAAGAGTCTACACTTCACTTGGTCTTGCGTCTACGTGGGGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

37809255  

End:

37809481

Strand:

+

>ChrB01_LTR-Pao_34

ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTAGAAGTTGAGAGCTCCGACACCATTGATAACGTCAAAGCCAAGATCCAGGACAAAGAGGGCATTCCTCCGGACCAGCAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCTGATTACAACATCCAGAAAGAGTCGACCCTTCACTTGGTCCTGCGTCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

223

Start:

38179744  

End:

38179966

Strand:

+

>ChrB01_LTR-Pao_35

ACAGATGCAGATCTTCGTTAAAACTCTCACCGGCAAGACAATCACTCTTGAGGTGGAAAGCTCTGACACCATCGACAACGTTAAAGCCAAAATTTCAGGATAAGGAAGGCATTCAGCAAAGGCTTATCTTCGCCGGGAAGCAGCTGGAAGACGGCAGAACCTTGGCTGATTACAACATTCAGAAGGAATCTACTCTCCACTTGGTTCTCAGGCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

227

Start:

38179968  

End:

38180194

Strand:

+

>ChrB01_LTR-Pao_36

ATGCAGATCTTTGTCAAAACTCTTACGGGAAAGACTATTACTTTGGAGGTGGAGAGCTCTGATACTATTGACAACGTCAAAGCTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAGCAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGAAGAACTCTCGCTGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTGTTGCGTCTCCGTGGTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

149

Start:

39632642  

End:

39632790

Strand:

-

>ChrB01_LTR-Pao_37

TTATAATATGCAAGCCTGCGACCATCCTCGAGTTGTTTACAAGCATAAATGATTCGCTGTAGGTCTGGTGGGGTCCCTTCCTTATCTTTAATCTTTCTCTTTAAATCCTCAACCATGTCTAAGCTGTCGACGTCTAAGGTAATGGTTTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

217

Start:

39632823  

End:

39633039

Strand:

-

>ChrB01_LTR-Pao_38

CAGCACGTAAAAAAAGGATTGATTCCTTCCAGATGTTGTAATCCGCCAAGCTACGGCCATCATCGAGCTGTTGACCGCAAAAGAACAACATCTGCTGGTGCGTAGGGACCCCCTCTTTATCTTTGATCCTGGCCTTGACGTTTTTAACGGTGTCTGAGCTTTTGACCTCATCAAGGGTTATAATCTTGCCCGTAAGATTCATTATGAAGATACGCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

182

Start:

39633056  

End:

39633237

Strand:

-

>ChrB01_LTR-Pao_39

AGAACACAGTGGAGAGTTGAGTCTTGTTGGATATTGTAATCAGCCAAGGTGCAGTCATCCTCCATCTGAATTCCGACAAAGATAAGCCTCTGCTGGTCGGTACGAAATCCTTCCTTACGTTGTATCATTGTCTTGAGGTTGTCAACGGTGCTTGAGCTGTGGACCACAAGGGCTATGGTCTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

152

Start:

39633314  

End:

39633465

Strand:

-

>ChrB01_LTR-Pao_40

ATATTGTAATCAGCCAAGGTACGGTGATCCTCCATCTGATTTCCGACAAAGATAAGCCTCTGCTTGTCGCTAGGGATTCCTTCCATAAATCGTATCGTTTTCTTGACGTCGCCAATAGTGTCTGAGCTTTGGACGCAAAGAGTTGTGATCTT