ID Class Order Superfamily Length Start End Strand View
ChrC05_LTR-Ngaro_61 RetrotransposonsLTRLTR-Ngaro1991971055019710748+
ChrC05_LTR-Ngaro_62 RetrotransposonsLTRLTR-Ngaro1991971209919712297+
ChrC05_LTR-Ngaro_63 RetrotransposonsLTRLTR-Ngaro2614881305348813313+
ChrC05_LTR-Ngaro_64 RetrotransposonsLTRLTR-Ngaro1025151005051510151-
ChrC05_LTR-Ngaro_65 RetrotransposonsLTRLTR-Ngaro1135321730353217415+
ChrC07_LTR-Ngaro_66 RetrotransposonsLTRLTR-Ngaro949036790460+
ChrC07_LTR-Ngaro_67 RetrotransposonsLTRLTR-Ngaro8556318645631948-
ChrC08_LTR-Ngaro_68 RetrotransposonsLTRLTR-Ngaro10241309884131089+
ChrC08_LTR-Ngaro_69 RetrotransposonsLTRLTR-Ngaro912043149220431582-
ChrC09_LTR-Ngaro_70 RetrotransposonsLTRLTR-Ngaro84983947984030-
ChrC09_LTR-Ngaro_71 RetrotransposonsLTRLTR-Ngaro1041902675319026856+
ChrC09_LTR-Ngaro_72 RetrotransposonsLTRLTR-Ngaro1163038554130385656-
ChrC09_LTR-Ngaro_73 RetrotransposonsLTRLTR-Ngaro2714782739947827669+

< 1 2 3 4 > Total 4


Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

199

Start:

19710550  

End:

19710748

Strand:

+

>ChrC05_LTR-Ngaro_61

CAACAGCAGCAACTCCAACAACAGCAACAAACCCAGCAGCAGCAACAACAGATCCAGCAGCAGCAACAACACCACCAACAACGGAAACAGCTGCCACAACTCCAGCAGCAGCAGCATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAGCAACAACAGCACCAGTTGTCACAGCTTCAACATCATCACCAACAGC

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

199

Start:

19712099  

End:

19712297

Strand:

+

>ChrC05_LTR-Ngaro_62

CAACAGCAGCAACTCCAACAACAGCAACAAACCCAGCAGCAGCAACAACAGATCCAGCAGCAGCAACAACACCACCAACAACGGAAACAGCTGCCACAACTCCAGCAGCAGCAGCATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAGCAACAACAGCACCAGTTGTCACAGCTTCAACATCATCACCAACAGC

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

261

Start:

48813053  

End:

48813313

Strand:

+

>ChrC05_LTR-Ngaro_63

CACCACCTTCTTCAGACTCACAACCTCCACCATCACAACAACAAGGAAACAATAACAACAACAACAATGGTGGAAACAATGATAACAACAACAAGAATGGTAATAACAACAATGGTGGAAACAAAGACAACAACAACAACAATGGTGGAAACAATGACAACAACAACAGCAATGGTAATAACAACAATGATGGCAATAATGGTAACAAAAACAATGGCAATAATAACAACAATGGTAATAACAACAAGGGGAATAACAATG

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

102

Start:

51510050  

End:

51510151

Strand:

-

>ChrC05_LTR-Ngaro_64

GTTGTAAAAGTTTAGTTGTAGCTAAGTTGGTTGTAGCTGTAAAATTGTTACCGTAGATTTTATTGTAGAAACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

113

Start:

53217303  

End:

53217415

Strand:

+

>ChrC05_LTR-Ngaro_65

TTTTAATATTTATATATACACATTTATATACATACATATATATATATATAGACGTATCCATGCCGTACCCGTATCTATAAATTTTAGATTTAGCCGTTTCCCGTCCCCGCCCC

Brassica carinata (v1.0)

ID:

ChrC07_LTR-Ngaro_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

90367  

End:

90460

Strand:

+

>ChrC07_LTR-Ngaro_66

ATATATATATATATATATATATATCCTGTGTTTGTCTGAGATTATTGTACAGTTTGATCCATCTTCAAGCCCCAAATCATTTTGCAAGAGTTGC

Brassica carinata (v1.0)

ID:

ChrC07_LTR-Ngaro_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

85

Start:

5631864  

End:

5631948

Strand:

-

>ChrC07_LTR-Ngaro_67

AAACGATTAAGCGGAGCTGGAGGAAACAATCTTATAATAAAATATAAACTACCATGTGCAAAAGCATGCAATAATGGATATTGTT

Brassica carinata (v1.0)

ID:

ChrC08_LTR-Ngaro_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

102

Start:

4130988  

End:

4131089

Strand:

+

>ChrC08_LTR-Ngaro_68

CAGTCATCCTATTATTTAGTAAAAACATACAGCTCCTGCAGCATACTCCTTTTGTAGCATAATGCTACTGCTATTGCTAATGCTACTGTTATTGCTAATGCT

Brassica carinata (v1.0)

ID:

ChrC08_LTR-Ngaro_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

91

Start:

20431492  

End:

20431582

Strand:

-

>ChrC08_LTR-Ngaro_69

CTTGCGGGAGATCAACATTGTATATATAAGTTATTTATATGTATTATATGCTTTTCAATATTATATATATATATATATATATATTGGGTAA

Brassica carinata (v1.0)

ID:

ChrC09_LTR-Ngaro_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

84

Start:

983947  

End:

984030

Strand:

-

>ChrC09_LTR-Ngaro_70

CTGTTGTTGTTGTTGTTGTTGTCTCTGCAGATGATGCATCAGAAAGAGCTGTTGTTGACGCTGCTGCAGTTGTTGTTGCTGCTG

Brassica carinata (v1.0)

ID:

ChrC09_LTR-Ngaro_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

19026753  

End:

19026856

Strand:

+

>ChrC09_LTR-Ngaro_71

TTTATATTTATGAATATATATATATATATATATATATTATAGACGTTTCTATGCCGTCCCCGTATCCATAAATTTTAAGTTTAGCCGTTTCCCGTCCCCGCTCC

Brassica carinata (v1.0)

ID:

ChrC09_LTR-Ngaro_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

116

Start:

30385541  

End:

30385656

Strand:

-

>ChrC09_LTR-Ngaro_72

TGGCTACTGTTGCATGGCCATTGCCTATTTTTATGACTGTTGTTGAAGCTACAATTGTGACTGTTGTTGAAGCTACTATTGTGACCGTTGTTCCACCATTGCCGGTCTCTGCTGTT

Brassica carinata (v1.0)

ID:

ChrC09_LTR-Ngaro_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

271

Start:

47827399  

End:

47827669

Strand:

+

>ChrC09_LTR-Ngaro_73

CCACAGGTCTCGCAGCAGCAGCAGCAGCATCAACAACAACAACAGCAAATACAAATGCAACAACTCTTGTTGCAACGTGCACAGCAACAACAGCAACAACAACAACAACAACAGCAACATCATCAACAACAGCAGCAGCAACACCAACAACAGCATCTAAACCAACCACCTTCTCAACAGCAGCAACAGCAGCAACAACAGCAGCAGCCAGCGCCTCAACACCAACAACAGCCAACACCACAGCAGCAGCAACAACAGCAGCAGCAGCCAC