ID Class Order Superfamily Length Start End Strand View
ChrB08_LTR-Ngaro_41 RetrotransposonsLTRLTR-Ngaro1174093945540939571+
ChrC01_LTR-Ngaro_42 RetrotransposonsLTRLTR-Ngaro10456787895678892-
ChrC01_LTR-Ngaro_43 RetrotransposonsLTRLTR-Ngaro941030926210309355-
ChrC01_LTR-Ngaro_44 RetrotransposonsLTRLTR-Ngaro2061557241715572622-
ChrC01_LTR-Ngaro_45 RetrotransposonsLTRLTR-Ngaro1311692495016925080+
ChrC01_LTR-Ngaro_46 RetrotransposonsLTRLTR-Ngaro2191779046117790679+
ChrC02_LTR-Ngaro_47 RetrotransposonsLTRLTR-Ngaro10757020945702200-
ChrC02_LTR-Ngaro_48 RetrotransposonsLTRLTR-Ngaro862185357721853662+
ChrC02_LTR-Ngaro_49 RetrotransposonsLTRLTR-Ngaro1153017586830175982-
ChrC02_LTR-Ngaro_50 RetrotransposonsLTRLTR-Ngaro1094014263340142741-
ChrC02_LTR-Ngaro_51 RetrotransposonsLTRLTR-Ngaro2085098484050985047+
ChrC02_LTR-Ngaro_52 RetrotransposonsLTRLTR-Ngaro945174312951743222-
ChrC03_LTR-Ngaro_53 RetrotransposonsLTRLTR-Ngaro1373008779030087926+
ChrC03_LTR-Ngaro_54 RetrotransposonsLTRLTR-Ngaro1473009248030092626+
ChrC04_LTR-Ngaro_55 RetrotransposonsLTRLTR-Ngaro11120453832045493+
ChrC04_LTR-Ngaro_56 RetrotransposonsLTRLTR-Ngaro25674969257497180-
ChrC04_LTR-Ngaro_57 RetrotransposonsLTRLTR-Ngaro1115903383459033944-
ChrC05_LTR-Ngaro_58 RetrotransposonsLTRLTR-Ngaro10588497778849881+
ChrC05_LTR-Ngaro_59 RetrotransposonsLTRLTR-Ngaro871102968811029774-
ChrC05_LTR-Ngaro_60 RetrotransposonsLTRLTR-Ngaro2961755720117557496+

< 1 2 3 4 > Total 4


Brassica carinata (v1.0)

ID:

ChrB08_LTR-Ngaro_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

117

Start:

40939455  

End:

40939571

Strand:

+

>ChrB08_LTR-Ngaro_41

CAGCAACAGCAGCAGCAACAACAACAACAGCAGCAGCTCCTGTATCAACACCAATTACAACAGAGACAGCAACAGATGCTTCTCTTACAGCAGTTGCAGAAACAGCAACAACAACAA

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Ngaro_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

5678789  

End:

5678892

Strand:

-

>ChrC01_LTR-Ngaro_42

TAGCTGTAAAAGTTTAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAATTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Ngaro_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

10309262  

End:

10309355

Strand:

-

>ChrC01_LTR-Ngaro_43

TGGTAGATCATTAGCATTAACATTAACATTAGCAGTATGCTTAGCATTAGCAGTAGCAGTATGCTATAGAAACAGTATGGTGCAGGAGCTGTAT

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Ngaro_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

206

Start:

15572417  

End:

15572622

Strand:

-

>ChrC01_LTR-Ngaro_44

GCGGCTGCTGCTGCTGAGGAGAATGTAGCAGACGGTGCTGCTGGTGATGGAACTGCTGCTGTTGAATGAACTGTTGTTGTTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTTGTGGCTGGAATTGCTGCTGCTGGGTTTGTTGTTGTGGATGATGAAACTGTTGTGGTTGTTGTTGTTGTTGCTGTTGCTGGAGGAAT

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Ngaro_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

131

Start:

16924950  

End:

16925080

Strand:

+

>ChrC01_LTR-Ngaro_45

CAATTGCAGCAGCAGCAGCAGCAGCATCAAAAGAATCAGTTGCAACAGCAGCAGAAGATTCAGCTACAACAACGTCAACTGGAACAAGAGTATCAATTACAACAGAAGCTCTTACAGGAGCAACAACAGTC

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Ngaro_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

219

Start:

17790461  

End:

17790679

Strand:

+

>ChrC01_LTR-Ngaro_46

CAAATTACAAATCAGCAACAGCAGCAGCAACAACAGCACCAGCAACAACAGATCCATCAGCAGCAGCAACAACAGCAGATCCAGCAGCAACAACAACACCAACAGCTGCCACAACTCCAGCAGCAGCAACATCAATTGTCACACCTCCAACATCATCAGCAGCAACAGCAACAGCAGCATCAGCTGTCACAGCTTCAACAACATCATCAGCAGCAGCAG

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

107

Start:

5702094  

End:

5702200

Strand:

-

>ChrC02_LTR-Ngaro_47

GGAGAGCAAGACGGAGGAGACACCGCCGGAAAGTATATAATATATATGTATATTTTAATATATATATATATATACAAAATTAATGTATATATATATATATATACAAA

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

86

Start:

21853577  

End:

21853662

Strand:

+

>ChrC02_LTR-Ngaro_48

TCTTTAAATTTATAATATATATATATATATATATATGTTAATATATATCTTTGTCCGCATGTACAGACAAAGAACATATTTTTATA

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

115

Start:

30175868  

End:

30175982

Strand:

-

>ChrC02_LTR-Ngaro_49

TGCCCCAACGGGCCAAATGTCCTTACGAACCAGATGCCCCAACGGGCCAGATGTCCTTGCGAACCAGATGCCCCAATGGGCCAGATGTCCTTGCGGACCAGATGCCCCGACGGGC

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

40142633  

End:

40142741

Strand:

-

>ChrC02_LTR-Ngaro_50

GCTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTATTGTAGCTGTAAGCTATATGCTGTAGATATT

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

208

Start:

50984840  

End:

50985047

Strand:

+

>ChrC02_LTR-Ngaro_51

ACAACAACAACAACAACAACAGTTCTATTCCAACAATCAGTCAATGCAGACAATCTTAGCGGCACAACAGCTCCAGCAGCTGCAGCTTCATTCACAGAAACAGCAGCAACACCAACACCAACAACAGCAGCAACAGCAGCAGTTTCAGTTTCAACAGCAACAGATACAACAGCTTATGCAACACCGTCTTCGACAGCAGGAACAACAA

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Ngaro_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

51743129  

End:

51743222

Strand:

-

>ChrC02_LTR-Ngaro_52

GCGGAAGTCATCTGGACTTCTTGGAAGTCTTCGACAAAGTCGTGCGGACTTCTTAGAAGTCGTCGGACTTCTTAGAAGTCGTCTGGACTTCTTG

Brassica carinata (v1.0)

ID:

ChrC03_LTR-Ngaro_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

137

Start:

30087790  

End:

30087926

Strand:

+

>ChrC03_LTR-Ngaro_53

TCTTACAGCTACAACAAATTTAACTACATCAAAGTCTCTGCACAAAAATCTGTAGTAACAACTTTACAGCTACAATCGACTTACCTACAGCTAAACTTCTACAGCTAAACTTCTACAGCTAAATTTTTACAGCTACA

Brassica carinata (v1.0)

ID:

ChrC03_LTR-Ngaro_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

147

Start:

30092480  

End:

30092626

Strand:

+

>ChrC03_LTR-Ngaro_54

CTACAGCCTATATCTTACAACTACAACAAATTTAACTACATCAAAGTCTCGACAAAAATCTGTAGTAACAACTTTACAGCTACAATCGACTTACCTACAGCTAAACTTCTACAGCTAAACTTCTACAGCTAAATTTTTACAGCTACA

Brassica carinata (v1.0)

ID:

ChrC04_LTR-Ngaro_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

2045383  

End:

2045493

Strand:

+

>ChrC04_LTR-Ngaro_55

CAGCAGCAGCAGCAACAACAACAACAGCAGCTTCTCTACCAACACCAATTACAACAGAGACAGCAGCAGATGCTTCTATTACAGCAGTTGCAGAAACAGCAACAACAACAA

Brassica carinata (v1.0)

ID:

ChrC04_LTR-Ngaro_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

256

Start:

7496925  

End:

7497180

Strand:

-

>ChrC04_LTR-Ngaro_56

TTGCTGCAGCTTATGTGGCTGTAGCTGTTGTGGATGTGACTGTGACTGTGGGTGCGTAGGAGATTGCTGTGACTGTGGGTGCGTATGAGATTGCAGTTGCTGCGTTCTTAACTGCTGCTGTTGTTGTAGCTGCTGCTGCTGAGTCTGTTGCTGTAGCGGTTGTTGATGGTGTTGCTGAAGCGGTTGTTGTTGCTGCTGCTGAAGCAGCAGTGATTGTTGTTGTTGCTGCTGATGCAGTGATTGTGGTTGTTGTTGC

Brassica carinata (v1.0)

ID:

ChrC04_LTR-Ngaro_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

59033834  

End:

59033944

Strand:

-

>ChrC04_LTR-Ngaro_57

GGGGCGGGGACGGGAAACGGCTAAATCTTAAATTTATAGATACGGGTACGGCATAGATACGTCTATATATATATATATATGTACATATATAAATGTGTATATATAAATATT

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

105

Start:

8849777  

End:

8849881

Strand:

+

>ChrC05_LTR-Ngaro_58

AGAAGCGTAACCCGTGTTTCGATCCTGTCGGAGCTCCACCGCGACCATCGAGGACCATAGTCAGAATTTCATTTGGTTGTATATATATATATATATATATGTATA

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

87

Start:

11029688  

End:

11029774

Strand:

-

>ChrC05_LTR-Ngaro_59

TTGCTGCTGATGCTGATGATGTTGCTGCTGCAGCTGTTGATGTGACATCTGTACTTGTTGCTGCAGCTGTTGTTGTTGTTGTTGTTG

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Ngaro_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

296

Start:

17557201  

End:

17557496

Strand:

+

>ChrC05_LTR-Ngaro_60

CAGCAACAGCAGCAACTCCAACAACAACAACAGATCCAGCAGCAACAGCAGATCCAGCAGCAGCAGCAGCAACAACAACAACAGATCCAGCAGCAGCAACAACACCATCACCAACAGCAACAGCTGCCACAACTCCAGCAGCAGCAGCATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAGCTGTCACAGCTTCAACATCATCACCAGCAGCAGCAGACGTCACCGCTGAATCAGATGCAGCAACAAACTTCGCCACTGAATCAGATGCAGCAGCAGCAGCAGCCTCAACA