ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Copia_61 RetrotransposonsLTRLTR-Copia11015041311504240+
ChrB01_LTR-Copia_62 RetrotransposonsLTRLTR-Copia224116296661631906+
ChrB01_LTR-Copia_63 RetrotransposonsLTRLTR-Copia164516323281633972+
ChrB01_LTR-Copia_64 RetrotransposonsLTRLTR-Copia33216460021646333+
ChrB01_LTR-Copia_65 RetrotransposonsLTRLTR-Copia9116558341655924+
ChrB01_LTR-Copia_66 RetrotransposonsLTRLTR-Copia38616559831656368+
ChrB01_LTR-Copia_67 RetrotransposonsLTRLTR-Copia45016564351656884+
ChrB01_LTR-Copia_68 RetrotransposonsLTRLTR-Copia59517023991702993-
ChrB01_LTR-Copia_69 RetrotransposonsLTRLTR-Copia53317041841704716-
ChrB01_LTR-Copia_70 RetrotransposonsLTRLTR-Copia160817410071742614-
ChrB01_LTR-Copia_71 RetrotransposonsLTRLTR-Copia222417427691744992-
ChrB01_LTR-Copia_72 RetrotransposonsLTRLTR-Copia405817600151764072+
ChrB01_LTR-Copia_73 RetrotransposonsLTRLTR-Copia26917935491793817+
ChrB01_LTR-Copia_74 RetrotransposonsLTRLTR-Copia23518324931832727+
ChrB01_LTR-Copia_75 RetrotransposonsLTRLTR-Copia152018328641834383+
ChrB01_LTR-Copia_76 RetrotransposonsLTRLTR-Copia223318351681837400+
ChrB01_LTR-Copia_77 RetrotransposonsLTRLTR-Copia22718374991837725+
ChrB01_LTR-Copia_78 RetrotransposonsLTRLTR-Copia62518420531842677+
ChrB01_LTR-Copia_79 RetrotransposonsLTRLTR-Copia14418972851897428+
ChrB01_LTR-Copia_80 RetrotransposonsLTRLTR-Copia14419004081900551+

< 4 5 6 7 8 > Total 4490


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

110

Start:

1504131  

End:

1504240

Strand:

+

>ChrB01_LTR-Copia_61

TCAAGAGATCTAAGAGAGAGATCATAAGATCTAAGAGAGAAACATTGAGAGTTTTAGTTTTGAGTAGTTTTTAAAGCTAATAAAAAAATTGTTCTTATAATTCTTTGTGT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2241

Start:

1629666  

End:

1631906

Strand:

+

>ChrB01_LTR-Copia_62

TCAGATAATCCTGGTGCGTTAATAACATCAGTGATGTTTACCGGTGAGAACTATAATGAGTGGTCTACAGAGTTGACCAATGCCCTCAAAGCCAAGCGAAAGCTGGGTTTCATAGATGGATATATACCTAAACCGTCCATTGATGATCCCAATTTTGAGTTATGGTCGTCAGTCAACTCGATGATAGTAGGTTGGATTCGTTCATCAATTGAAGCTCGAGTTCGATCAACAGTTACCTTTATCTCAGATTCTCATAAGTTATGGGATAACCTTAAGAAACGTTTTTCGGTGGGAAACAAGGTTAGAGTTCATCATCTGAAGGAACAACTTTCATCTTGCAAACAAGACGGTCAATCAGTGATGGAGTATTTTGGTCGTCTAGCAAAGATGTGGGAGGAATTAGATATGTACAAACCAGTTCCAGCTTGCAGTTGCAGTGCAGCTACGGAGTATGAGAAGGAACGTGAAGAAGAGAAAGTGCATCAGTTCGTTATGGGCCTTGATGAAGCTCGATTTGGAGTAGTCTGTCAAGGGATAATTGCAAGTGATTCCTTAATTGATCTTGTTGATGCATATGCTAAGGTGGTCAGGGAAGAACAACGACTCAATTCGTCCAAAGACAGAGAAATTCAGCAGAACGCAGTTGGCTTTGTTGCCAAGAAAGAAACATTGGAATCAACTCGTCGTTCTACTCAGTGCTCTCATTGTAATCGTAGTGGACATGAGAAGACTAATTGTTGGCAACTAGTGGGGTTTCCTGACTGGTGGGAAGAAAGATCAACAAACCGTGGTGAAAACAGAGTATTAAGAGGTCGTGGTCGTGGTGCTTCTGATCGTAGTAGAAGCTCAAATGCACGGGTCAATAACGCTCAGGCTACAACATCAAATTCATCTTCTTTTCAAGTGTTTACAGAGGAACAATTGAGAATGCTTACACAGATGATCAATGAGAAGTCAAAGTCATCAGATAAGTTGTCTGGTAAGAATAGACATGGTGATCTCATACTTGACACAGGAGCTTCTCATCACATGTCAGGAGATATCTCAATATTAACGAATGTTAAAAGCATTCCACCGTGTCTGGTTGGTTTTGCGGATGGCAACAGAACTTATGCTACTCACGTTTGCACATTTGTTCTTTCGGACAAAATAACACTCTCAAACGTGTTATATGTTCCGAATCTCAACTGTTCTCTCATCTCCATGTCCAAACTACTCCGTCAAACGAATTGTTTTGCTCTTCTAACGGACACTATTTGTGTTTTACAGGATCGTTTCACGAGGACGCTGATTAGAGCAGGTGAAGAGCGAGATGGGGTTTATTTCTTTCAGGATGTCATGGCTGCAAGAGTGTCCGCTTCTGAGAAAGTTGCTAGTTCAGTTGATCAGGATCGTTGGCATCAAAGGCTAGGGCATCCGTCGTTTTCAGTGTTATCTTCTTTAAAATTGTGTTCTATTTCAAATAAATATGTTGCTCCAAATCCTTGTGATGCTTGTTTTAGAGCAAAACAGACTCGAGAAGTTTTTTATGATAGTTCAAATAAAGCTAAAGATTGTTTTGAGCTTATACACTGTGATGTGTGGGGACCATATAGGACCAAAGCATCGTCTGGAGCATCTTACTTTCTCACGATAGTAGACGATCATTCACGGTCAGTCTGGACCTATCTACTGCTTGAGAAATCTGAAGTTCGAGTAGTTCTCCAAAACTTTATAAAGATGACAGCAAAACAGTTTAACAAGGAAGTTAAAGTCGTAAGAAGTGATAACGGTACGGAGTTCATGTGTCTCTCCTCGTACTTTCATGATAATGGTATTCTTCATCAAACATCTTGTGTAGCTACACCACAGCAAAATGGGCGTGTGGAAAGAAAGCATCGCCACATACTAAATGTAGCTCGATCACTACTATTTCAAGCAAGTCTTCCGGTTAAGTTTTGGGGTGAAGCTATTCTAACAGCATCTCACCTCATCAATCGCACGCCTTCAGCAATTCTTAAAGGACGTACTCCCTATGAGTTACTTTATGGCGTAGCTCCAAGTTATAATCATCTTAAAGTCTTCGGATGCTTATGTTATGTTCATCTGAAGCTGAGAGATAAGAACAAGTTTAGTCCAAGAAGTGCAAAATGTAACTTCATTGGTTATCCGTTCAGTCAAAAAGGATGGAAGGTCTATGACCTAGAGAAGAAGGAGTTCCTTATTTCAAGAGATGTTATATTTCATGAAACAGAGTTTCCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1645

Start:

1632328  

End:

1633972

Strand:

+

>ChrB01_LTR-Copia_63

GTAAGACACTCTACCCTTTGGATGATTATGTCACTGACCTCAACTTCTCCGTATCCCATCAGACATTCTTAGCAGCTGTTACTGCTGGTATTGAACCAAAACGATACTCTGAGGCAATAAAGGAGAAAGTATGGCGTGATGCGATGAAGCATGAAGTTGTAGCTCATGAAGATCTTGGTACATGGGATATTGCAACATTGCCGCCTGGGAAGAAAGCTATTAACTCTAAATGGGTGCACCGTATCAAATACAATGCCGACGGAACAGTTGAAAGGCACAAGTCTCGCTTAGTAGCATGCGGTAACAAGCAAGTTGAAGGTGATGATTACTCAGAAACCTTTGCCCCAGTAGTTAAAATGTGTACTGTCCGAAGTCTTCTGGCTATAGTTGCAGCCAAAGGATGGGAGATCCATCAAATGGACGTACACAATGCTTTTCTTCATGGTGATCTTGATGAAGAAGTTTACATGAAGTTACCTCCTGGATTCACTCATTCGGATCCAAATAAAGTTTGTCGCTTAAGGAAAGCTATATATGGTCTTAAGCAGGCACCTCGTTGTTGGAATGCGAAGTTGTCTAAAGCCTTGATCGAATTCGGCTTTGAGCAGTCCTATTCTGACTACTCTTTGTTCATGTACACGAAAGGACAGAAAGAAGTAAGGGTTCTAGTCTATGTTGATGATCTGGTTATTGCCAGTAATGATCTTGAGTTGCTTACCAAATTTAAAGAATACTTGAATAGATGCTTTCGTATGAAAGATCTTGGTAAACTCAAGTACTTTAGGCATTGAAGTAGCCAGAGCAGAAGAAGGAATATTTCTCTCGCAGAGAAAGTATGCGTTGGACATCATTGCTGATTGTGGTCTACTTGGAGCCAAACCAGTTTCCACGCCACTTGAACCAAATCATCACCTTGCTGCAGATAAAGGACCCCTCTATGCAGATCCGAAGCAATATCGTCGTCTAGTTGGACGTCTTGTTTATCTCTCAATTACAAGACCTGAACTTGGGTATACCATCCACATGTTATCACAATTTATGAAAGCTCCACATGAAGTACATTGGAATGCAGCATTGCGTGTGGTTCGATTTCTCAAAGGAAGTCCTGGACAAGGAATTCTACTCAGATCAGACAGCAACCTCGAGTTATCAGTTTATGTTGATGCAGATTGGAATACTTGTCCCAATACCCGACAGTCCTTAAGTGCCCACGTTGTGCTTCTTGGTGGCTGTCCTATTCAGTGGAAAACTAAGAAACAGAAGACAGTATCTCACTCATCGGCTGAGGCGGAATACAGAGCTATGGCCTCTGCTACGAAAGAATTAAAGTGGGTTGTACCTCTGGTTCAAGATCTTGGTCTAAAAGTCACTAAACCGGTTCCGTTTTACTGTGACAGTATGGCTGCTATACATATTGCAGCTAACCCAGTGTTCCATGAACGGACTAAACATATAGAAAGAGACTGTCATTGTGTCCGTGATGCTATGAAGGCCAAGCTTATAACAACACAACATGTTCGTTCAAAAGACCAAATAGCTGACATTCTCACGAAGGTTTTGGGGCGCTCTCAATTTGAATTCTTGTCTTCCAAATTGGGAGTTCAAGATCCTCACTCTCCAACTTGAGGGGGAGTATTAGGAAAGA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

332

Start:

1646002  

End:

1646333

Strand:

+

>ChrB01_LTR-Copia_64

TTTCAAAAATTTCCTTTTCTCCAACTAATGAACAGTGATTTTCATCTATAAATACAACTCATTTTCACTCCATTTCATCATCCAAAACATTTCATCTTCTCAAAAAAAAAAAATTCAAATCGCTTCTTCTCTCGATTTTTTCATTTCAAGAAAGATGATTCGCAAGACACTTTTGTTTTATGTGCCATTTTATTTGTTTTTCTATTTATGGTTTATTCGTTAGAGAATTTACTCCGAAAGTGAATTTAAGATGAAAATCGGTTTAATTTCTTTACATCGCTTCTCCTTGTAATTGCTTCGCATGATTAATATAAATGGTTCATTTTATAATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

91

Start:

1655834  

End:

1655924

Strand:

+

>ChrB01_LTR-Copia_65

CGAGATTGATAAACCTAGTATTATAATCTCGTGGGGAAGAGTTAAAGAATCTCACTTTTATGATAAGTCAAACATCCGAAGATTATGTTTA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

386

Start:

1655983  

End:

1656368

Strand:

+

>ChrB01_LTR-Copia_66

TTATGTTGAGACAATAAGCAAACGAAATGATATATACATTTCAATCGAAATAATTCTCAAAGCAAGATAAGTATTTTAGAAAATATCTACAGCCTCTTATATATTGTACTACACAAAGATTAGTATAATGAAGATAAATGTATAGTAAACTAGAAGTTTACATTTGGCATGAATCAGTTAGACCATTTTGGTTCATTAATAATGCGAATATATACTTAAAGGTCATATGCATAGTCATATAAGAACCGAAGATTCTTCCGAATGATTTGACATATGTTGCTTACCCATAAGATAAAAGGGTAATATGGTTTCACCAGCCAAAATAAGATATTGGCATAAATAACGAAGATGTTAGTGGACTGATCACCCACTATGCATTTTATAAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

450

Start:

1656435  

End:

1656884

Strand:

+

>ChrB01_LTR-Copia_67

AGCAACAATGGTTAGCATCAAGCCAATAAATATTCACTAGTTCTCCCCATCATTGGTATAAAATCGAAACCAATCATTTTCATCTAAGAATGTTGGATGTTGCTCCGCCCACGAGCTTCAAATGAAGATGTGTTTTCAAATGAGGTTGGAAATATATGTTGGATATAAATCTCTATTGACACTTAAGAATCCAGATCCATCCCGAAAAATATAAGTAAGGCTATACATGAATTCTAAAAGTGAGTTGGTTCTTCCAACATAAGGGGAGAAAATAAACATTTGGAAAAGAAAATAAGTTGAAATGAATTATCATTGATCCTGCTAAACACAATGTGAAATAGAAGTCCAAAAGATAATTCATTTCAAAACTTACTAAAGCAGTTGCCGACACCCACCCATATAAATATAGTGATCAAGTCACATATACCGCTGTAAATGCTCCAATAAGAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

595

Start:

1702399  

End:

1702993

Strand:

-

>ChrB01_LTR-Copia_68

CCTGACCTTGTGTGAACCTGTGAGGAAAAATACTGACGATAACAGGATATAGTATAAGCAATAACTAAATGAGACCAGCACTTTTACGTGGAAAACCTCCTCGATGTGAGAAGAAAACCACGGGACCGTAGTCCACTCAACAATCCACTATATAAATGTATGTGAGTACATCCACGTCCTCCCTGTTCAACAACCTGAACAGAACAGAGACTCTAGCTACAAAGAGCTATCTCCAACACAAGGACAACAACAACAAGAGAGCAACACAAAGCTTCAAAACTGGCAGCAACCAAACGACCTCAGCTCACAAGAATTCCGGCAACCAGAGACTAATCCCACCGTACAAATCAAAGATGCACAAGTCAACAACACCTCTGTCAAATTTCAGCTCAATCACAGAAGATCTCACCGTCGGATTTACCAAACACTCAAGACAGTACTGCTGAAGAACTGTGACGACCAGCTTCACTAAAACCCAGACAACAGAAGATCCAACCGTTAGAATTCAAATCCCTTCGGTGAACCTTTAAATCACTGATTGAAGAAGCTTCCCACAAAATATCAGCCCGATCAGGATCCATTTGACCCTCCAAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

533

Start:

1704184  

End:

1704716

Strand:

-

>ChrB01_LTR-Copia_69

AACTAAATGAGACCAGCACTTTTACGTGGAAAACCTCCTCGATGTGAGAAGAAAACCACGGGACCGTAGTCCACTCAACAATCCACTATATAAATGTATGTGAGTACATCCACGTCCTCCCTGTTCAACAACCTGAACAGAACAGAGACTCTAGCTACAAAGAGCTATCTCCAACACAAGGACAACAACAACAAGAGAGCAACACAAAGCTTCAAAACTGGCAGCAACCAAACGACCTCAGCTCACAAGAATTCCGGCAACCAGAGACTAATCCCACCGTACAAATCAAAGATGCACAAGTCAACAACACCTCTGTCAAATTTCAGCTCAATCACAGAAGATCTCACCGTCGGATTTACCAAACACTCAAGACAGTACTGCTGAAGAACTGTGACGACCAGCTTCACTAAAACCCAGACAACAGAAGATCCAACCGTTAGAATTCAAATCCCTTCGGTGAACCTTTAAATCACTGATTGAAGAAGCTTCCCACAAAATATCAGCCCGATCAGGATCCATTTGACCCTCCAAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1608

Start:

1741007  

End:

1742614

Strand:

-

>ChrB01_LTR-Copia_70

ACATTCTCCCTTCTAAGCTTCAAGCCATCTTTGCTTAAGTCTTGAACTTGAATCAGCTCCTCATCTCTTTGAACTTGATTCTTGCTAAAGCTTTAGTTAAGATGTCCGCTTTGTTCGGTACATATTCCACATCGATCTCGCCTTGCTCCACTCGCTCTCGAATGAAATGAAACCTCTTGTGAATATGCTTGCTCCTTCGGTGAAACACGGATTCTTGGCTAGTGAGATAGCTGACTTGTTGTCCACTCGAATCAGTGTCTTCTTCAGCTCTTTTCCGTAATCTCACTTATCAAATCTTGTATCCAGACTGCCTGTTTTGCTGCTTCCGTTGTCGCCATATACTCGCCGCAAGAGCTTAAAGATCTTGTGTCTTGCTTACGTGAGCACCAAGTTATTGGCGTTTCTCTAGACAAAACAAGTGTCATGTCGTGCTTCTTCCATCGTCCGGATCGTGTTGTGACTATCGCCACCGTATCCTACGAGTTTCATTGATCCACCTTGCTTGTAAGATAACCCGTACCGACCGTTCCTTTAAATACCTTAGCACTTGCTTGATGCGTTGCCGTGTGGCGTTCTTGGTGAGTGCATATATCTACTCAAGATTCCCACTGCGTAACACATGTCTGGTCTTGAATGCATAAGATATCCGAGACAGCCAATTCTTCTTCGATAAAGTGTAGCATCTATCTCTCGGTTCGCCGAGGCCTTTTGAGAGTTGCAGACCGAACTCCATCGGTATACATGTTGCGTTGCGGTCGATCATCGCAGCTTCCTCCAACACTCTCCTTGCGTATGCTTCTTGGTTAATCATGATACACCTAGGACTATGTTTTACTTCCAATCCGAGATAGTAAGTTAACAGACACAAATCAGACATCTCAAAGTTCTTCGACATGTTCTTCTTAAACTCTGAAATTTCCTTCGTAGAGTCTCCGGTAACAAACAAGTCGCCAACGATATAGCCACGATAAGAATCTTTCCTTTATCATCCTTTCGGTAGACAGAATTTTCTTTTGAACACCTCTTGAACCCTAGTTGCTTCAGAGTTCGATCAAGCTTTATGTTCCAAGCTCGTGGAGCTTGTTTCAACCCGTACAAGGCCTTGGAGAGTTTGAAAACCTTATGCTCTTCTCCCTTCTTTTCAAACCCTTCAGGCTGTGACACATAAACTTCTTCGCTTAACTCACCATGTAAGAACGCTGTCTTGACGCCTAGATGGTGAATCTCCCACTTGTTCGCAGCAGCTAACCCAATCGAGTCTTATGGTCTCTAATCGAGCCACAGAGCAAATACTTCGCCAAAGTCGATACCATGTTCTTATGCGTAACCTTTAGCTACGAAGTCTCGCTTTAAACTTGTTGATAGAACCATCGGCGTTTCTTTTGATCTTGAAGATCCACTGAGGCCGATGATCTTTGCTCCAGCTGGCTTGTCTATTAGCGCCCATGTCTTGTTTATGTTGATAGAATGGATCTCGCCTTCACATGCCTTCGCCCATCTTTTATCTCCCTTTGCTTCTTGGAAATTCTTTGGCTCATCGTTGATATCATGAATCAACAGCTCACATTCTATCTCAGCAAGTAAAACGTAGTCATTAAGGTAACTAGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2224

Start:

1742769  

End:

1744992

Strand:

-

>ChrB01_LTR-Copia_71

TGGCTATAAACGGACCCTTCCCTTCGCATAGCCAATCCCCACGCCATACTTAAACATGCCAGAGTCGCCTTGACCTTCCTTAGCTGCTCCTTCCAATTCCAACAAGTCTTCGTCGAAGATTACGCCCCGACTTACGACTATCCTTCCGAGAGTAGGATTATAAAGTCGATAAGCTTTCGTGCCGGGTTCGATTCCGAGATGGACAAGAGCTTGAGAACGATCATCAAGTTTCCTTAGATGAACTGAATCTACTTTGGCATGAGCAACACAGCCGAAAACTCTCATGTGACTTACGTTAGGCTTTCTTCCCTTCAAGCTTTGATGGAGTTTTATTCTTCAAAGCTCTAGTAGGAACTCGATTGATCACATATGTTGCGTGTCGTACGGCTTCTCCCCACATGTAATTCGGTACCTTCATAGCTTTCAACATGCTTCGTGTCATCTCCATTAAAGTACGATTCCTTCTCTCCACAACTCCATTCTGTTGTGGAGTATATGGTGCTGTTAAATGGCGCGATGCCATGTTTGTTGCGAAGTCTTAGAAATCCTTTGACGTGAATTCTCCTCCTCTGTCCGTACGGAGTGTTCCAATTGTCTTGCTTGCATCCTTCTCAACAAGAGTTTTAAAACTCTTGAATCTGTCAAAGGCTTCACTCTTTTCTTTCAACAAGATAGACCACATATATCTCGTACAGTCATCAACAATGACGAAGATATACTTGTTGTGAGCTTGTGTTGCCGGCGATATGGGACGGCAAAGATCCGCGTGTAACAGTTCGAGAGCAACCGAAGATCTATATGCCGTTGCTGCAGGAAAGCGTGGTTTGCTTGCCAACCAAACACGAGTCACACAGCTGCTTCTCTTCATGTATTTCAGGCAAGCCACGAACCATATCATGTTTTGCCATGTCCTTATTGTCTTGAAGCTTATATGACCAAGACGCATGCCATCTCCATGGTTCCTCCGTGATCTTTCGCGGTAGACAAGTAGGTTTACTGACCTTGAGTGATATCTTATACGATGATTAGAAGTTCTCGAACTTTCACCAAAAGTCCGCTTGGATCTCTCAAGGTGAGGTAATTCTCTTTCATCCTTATGTCACACCCTTGTTCAGTTGCTTGACCCGGACTTAGTATGTTACTTCTCAAGTTCGGTATGTAATATATGTCGGTTAGAGCTTCGTTCCCTGTCTTGGCTTCAAAGAGAATAGATCCTTTGCCGCTTATATCTACATACGAGCCGTCTCGAACTTGACTTTTCCTTTGATGTTCTCGTTGAGCTCGAGAAGTAAGACCTTTCACCAGTCATGTGATTGCTCGCTACCGTTGTTCAGATACCACATACCATCTTCTTTCTTGCTTGGTTCTAGTGAATTCGGTAAGACCTTTTCTTCGTTGAGATACACAACTTGATGCATGTATAACGCAGCTTACGCTACCTCTGTCTCTGTCTTATTTAGCTCTTGTTTCTCTTCTTTCTTCTCGGGGCACCTGATTTGAAGTGACCCTTCTTCTGCGGTTGAAACATATGATCTGAGTAATCCTTTTTCTCACCGGTGTTACTTCTACCTCGTCCTCTTCCATCGTTTCCTCCTCGACCACGCCCACGGTTCGAGCCTCTTCCACGCCCTGTTGAGCTTCCTTGTCCATTCGAACCTTCTCGAGTGGAGAATAAAAGATTTTCTTGTTGCCCTTGATCTTCCTTTCGTTTGACTCGTTCTTCATATGCTTTGAGTCTCCCAATCCGTCTTGAACGTAGTATTATTCAAGTCCAGCATTTGCTCTAAAGATGCAGTCATGTGAATAAACTGAACGGTAAACTATCAAGGAACTTCTTCACAATCTTTGATTCTTCTATGCTCGTCCCAACGTAGCTGCTCTTGACTTCAGTTCCGTTATCTTTGCAGAGAAGTCATCGATGGTTTCTGATTCATTCATGCTCGACGATCGAACTTCGTTCATCAACGTTTGTAGGCGAGCTATCCTCACACGCCAGCACCGAGATTCCTTGTCTTGATGGCTTCCCAAATATCTTTAGAGTCGTCTTCCTCGATCTGTAACACCAGGTTCTCGGTAGAGATTGGTATAGCAGAGCTGTAGCGATGTCGTTCTTCTCTTCTTCATCTGTACCGGGATCAACGGCTTGCCACGCTTTATGAAGTTTTAACAAAACCTTCATCCTCTTCGCCCAAACCATATAGTTCGTTGTGTTAAGCATCGGACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4058

Start:

1760015  

End:

1764072

Strand:

+

>ChrB01_LTR-Copia_72

CTCGTCCTCCTGAATCCGATCCAAGCTTTCGCATCTGGTCTAGATGTAACAGCCTTGTTAAGTCTTGAATCCTTAACTCGGTAACGACTCAGATCTATCGTAGTATCCTTCGTTTGAGTGATGCTACAGATGTGTGGAATGATTTGCATAGCAGATTTCATATGACGAACTTGCCGAGAACTTACAACCTCACACAGGAGATTCAGGATCTACGCCAAGGTTCTCTCACTCTCTCCGACTATTACACTAAGCTGAAGACGTTGTGGAGTAACCTGGAGAACTGTGAAGAACCTGATGAACCTTGCGTGTTTGGAAAAGCTGTTCAGCTTCAACAAAAGGCTGACCGTGCTAAGATTGTTAAGTTTTTGGCTGGATTAAATGAATCATATGCTGTGATTCATCGTCAGATTATTATGAAGAAGACTTTGCCATCTCTCACTGAAGTTTACAATATTCTGGATCAAGATGACAGTCAGAAGAGCTTTGCTACTGCAATCTCACCTGCTGCTTTACAAGTCTCTGAGATCACTGCTCTGCCTCAGCAAAGTCCGAACGTTTGTTACGTGCAGTCTGGTGCTCACAAAGGGAAGCCTATCTGTTCATTTTGTAACAAGATTGGTCATATTGCTGAACGTTGTTACAAGAAGCATGGATTTCCTCCAGGTTATACTCCACGCGGCAAAACACCTGAGAAGACTCAGAAACCTCAATCTGCATCTCCTTTAGTTGCTTTGTCTACTAAACCTGAGTCGAAGTCTCCTTCTCTTGACAACCTGATAGGCAATCTCTCTAAGGATCAAATCCAGCAGTTCATTGCTCTGTTCAGTTCACAACTTCAGAGTACTAGCACGAGCAAAGTTTCTGGTGCAGGCGACGCATCTACATCTCAGGGTACTAATGAGACTTCGGGTATCCTTTTCTCTCCATTTACCTTTTGTTTCATTGGTATTCTCACCGTTTCACAGAACTCTCTCAACAAAGATTCCTGGATACTAGATTCTGGTGCTACGCATCATGTATCTCATGATAGAGAGTTGTTTGTGTCTTTGGATACCAGCATTATCAGTTCTGTGAATCTCCCTAATGGCTCTATGATCAAGATCAGTGGTGTTGGCAGTATTCAACTGAATGAACACATTCTACTTCAGAATGTTTTGTTTATTCCAGAGTTTCGCTTGAACCTTATCAGTATAAGCTCGTTGACATCTACTCTTGACTCCAGAGTCATATTTGATCCATCTACTTGTGAAATACAGGATCGTACCAAGGTCTCGATGATTGTTCAGGGTAGAAGGCTCGGGAATCTGTATGTGCTGGACATCAATGAAGCGTCTGTGAGAGTGAACGCAGTGGTGGATATTGGTACCTGGCACAACAGAATGGGTCATGCTTCTTATTCAAGACTTGACCTGATAGCAAATAATTTGGGCACTACGAAGCAGAAGAATAAAGGAAACGCTTACTGTCATGTTTGTCACTTGGCAAAACAGAAGAAGCTTTCATTTCCTTCTCCAAACAACATATGTAATTCAAACTTTGAACTTTTGCATATCGATGTTTGGGGACCATTTTCAGTTGAGACGGTGGATGGTTACAAGTATTTTTTGACTATCGTGGATGATCATTCCCGTGCTACATGGGTTTATTTAATGCGTACAAAGGATGAAGTTCTTAAGGTGTTTCCAGCGTTTGTTGCTCAAGTCGAAAACCAATACAACGTGAGAATTAAAGCGGTTAGATCAGATAATGCACCTGAGCTAAAATTCTCTACATTCTTTCAAGAAAAGGGCATCATCTCGTTTCACTCTTGTCCTGAGACACCAGAACAGAATTCCGTGGTAGAACGTAAGCATCAACATCTGCTTAACGTTGCTCGTGCCTTCATGTTTCAGTCTCAACTTCCTCTTGTGTACTGGGGAGATAGTATATTGACTGCAGTCTTCGTTATCAACCGCACTCCTTCACCTGTGATTGGTAACAAGACACCTTTTGAGATACTAACCGGTAAAGTTCCAGTATATGATCAGTTGAGAACATTTGGATGCTTATGTTATGCTTCCACATCACCGAAGCAGAGGCACAAGTTTCAACCGAGATCTAAGGCTTGTGTTCTTTTGGGGTATCCTTCTGGTGTAAAAGGATATAAGTTGTTGGATTTGGAGACACACAAAATCACAGTTTCAAGACATGTCATTTTTCATGAGGATATGTTTCCGCTGGCCTCTACTCAACCTTCTGATGACAGCTTGAAACTCTTCACACCTACTCCTTTGTCCTCAGGTCATAACCATCCACAAGAACCATCAGAAATTTCTCCACCTTCTTGTCTTTTACCAAAAATTTCTTCTCGCCCACGTAAGCAACCTGCTCACTTGCAGGATTATCACTGTTACCACTTAAATTCTACTATCACTTACCCCATTTCCTCTTCTCTTTCATATTCCAAATTATCTACTCCTTACTTATCTTTTATCAATTCCATCACCAAAATCCCAATCCCTCAATGTTACTCTGAGGCAAAGGACTCTAAAGAATGGTGTGAAGCGGTTGATAAGGAGTTTGGAGCTATGGAATCAACAGGAACTTGGGAAGTAACTACCTTACCGGCTGGGAAGAAAGCAGTTGGGTGCAAGGTACTGTACTCTTTGAAGTTTAACGCTGATGGAACTCTTGAGAGGCGTAAAGTGCGTGTTGTTGCTAAAGGGTTTACACAGAAGGAAGGGTTGGATTACACTGAGACTTTCTCTCCAGTTGCCAAACTCACAACTGTACGTTTCTTACTGAAAGTTGCAGCGTCGAGGAATTGGTTTCTTCATCAACTCGACATTTCTAATGCATTCTTGAATGGAGACTGGATGAAGAAATATATATGAAGATACCAGATGGCTATGCAGAGAGAAAGGGCGTTACATTGTCTAAAACAAACGTTTTCCGTTTGAAGAAATCTATCTACGGGTTGAAACAAGCATCTCGACAATGGTTTCTAAAATTCTCTGCTGCATTATTGCGTTTGGGGTTCTCTACTGGTACAAGTGATCATACACTCTTCTTGAAATCGTTTGATGATGGTCACTTCATGGCAGTATTGGTGTATGTGGACGACATTATTGTAGCTGGCACAAGTGAGTTGCATTCTAAGCAGTTGATTCATGATCTTTCACAGCAATTCAAACTCAGGGATCTTGGTGCTCTTAAATATTTTTTGGGTTTGGAGATAGCTCGTACGAGTCAAGGCATCTCGTTATGTCAACGTAAATATGCTCTCGAGATCTTGACTTCTACTGGTATGTTGGGTTGCAAACCTGTCTCTACTCCTATGGTTCCTAACCTGCATCTCACTTTGAAAGATGGTGATCTGATTGTTGAGCCTGAACGATATAGAAGTCTGGTTGGAAGATTGATGTACTTGACTATTACACGTCCGGACATCACTTTTGCCGTCAACAAATTGTGTCAGTTCTCTTCTGCTCCTCGTACTCCTCATCTCACTGCTGCTTATCGAGTGTTACAATACATCAAAGGCACCGTCGGCCAAGGACTTTTCTATTCTGCTTCGACAGACTTGACCTTGAAAGGGTTTGCTGATGCTGACTGGTCTTCTTGTCGGGATAGTAGACGTTCTACTACAGGTCTGTCAATGTTTCTTGGTGATTCTTTGATCTCTTGGCGCTCGAAGAAACAGGATACAGTCTCTTGTTCTTCAGCAGAGGCAGAGTATCGAGCTTTGAGTAGTGCTTCTAAGGAGATGCTTTGGCTTATCAAACTGATGGATGATCTGAAGGTTCCTCGTACTCAGATTCCTATCATCTTCTCAGATAGCACAGCAGCGATATATATAGCTACAAACCCGATTTTTCACGAGCGAACAAAGCATATTGAAAATGATTGTCATTTTGTTCGGCAATGGCTTGATCGGAAAGTTCTTAAGAGTCTTCATGTGCGCACTGCTGATCAAGTGGCTGACATCATGACGAAACCTTTGTTCCCTCATCAATTTAACCATCTTATGTCCAAGATGAGTCTTCTTAACATTTTTGGAAGCTCATTTTGAGGGGGCC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

269

Start:

1793549  

End:

1793817

Strand:

+

>ChrB01_LTR-Copia_73

TTGTAGAGAGAGTTAGGTGTGAGCAAGAAAGAGAGAACATTTTTCAAAGTATAAGCTTGTAAGTGTTCTTGAGAGTTTGTAAGCAACATTTAAACCAAGATAGGTACTGCAAAGGCCTTGAGGTTAAAATACACTTGTAAACTCTGATCTAGTGGATTCCGGAAGACAGTTCCCGGCCCAGACTAACACCGTCGTTAACGTGTGTAACTGGGTTAACAATCGCCTGTATTGCTCTGTTTTATCTTTCCCTCTGTTTCTTGTATTGTGCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

235

Start:

1832493  

End:

1832727

Strand:

+

>ChrB01_LTR-Copia_74

TGTTGACTTAAGCTTAAATTTAACTTAGGTTATAAGTTATCCTAATGAGATTAGGATTATAAAGATTGAGGGTTATCCTTAAGATATGGTTCCTAATGAGTTTAGGAGTTTAAAAGTGTTATATAAAGAGATGCTATGATTGAGATATAATTTGTGAGTTTGAGTTTGAGAGCTTTAGTTTTTGAGATTGTTTACAGTATTAATAAAGTGAGTTCTTATTGAGATCATTGTCTTG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1520

Start:

1832864  

End:

1834383

Strand:

+

>ChrB01_LTR-Copia_75

CCATACAATTCCCATGCTCACCGCCACCAACTACGGTGTGGAGCATGAGGATGAAGGTGGCTCAAGGTACATAAAGTATGGGAGATGATAGAACCGGGATAGATGATGGAGACAAGAACGACATGGCTCGAGCATTGTTGTTTCAGTCCATACCGAAGTCCTAATTCTACAAGTTGGGGATCTTGACACCTCAAAACTTGTGTGAGGCAAATAAAAGCAAGGCATGTGGGAGCTGACAGAGTTCGTGAGGCTAGGTTACAAACACTCATGGACGAGTTTAGTCGATTGAAGATGAAAGACAGAGACCATTGATGATTTCTCGGTAAACTCTGAGAGATGTCTTCAAAATCTTCAGCTTTAGGAGAAGACATAGAGGAATCTAAACTTCGTCAAGAAATTTCTTAATAGCCAGAGGAAGAGTATATACATATCATAGCTGCTCTTGAACAGGTTCTAAACCTCAATACCACCAGCTTTGAAGATATTGTGGGGCTTAAAAGCATGAGGAGAGGATCGTAGATGATGATCAGCGATGATCAAGAAAACTCATGTATGCCAATGCTGACTCCCAATCACAAACGAAACCTACGGAAGAGGAAGGGGCGTGGTGGGCGTTATGGTAACAGAGAAGAGGGCGTGGACGATACAACAATCAGCAAGACTGGGCAAGGTAGAATGCTGGCGTGGTATGCTTGAAGCGATAAGACTGGCCACTATGCCTATCTATGTCCAGACCGGTTACTTAAGCTCCAAACACAAGAGAATGATGCTGAGACACCACGAGGCTGAGGAGTTGATGATGAATGAAGTCGTGTATTTGAATGAGGAGAGTGTGATGCCAAGCAAGTTCAAAGCGTAAGACAATGTGGTATTTAGACAATGGCATAAACAATCACATGTCGTAATCGTGCTTTTTGCAAAGATTGATGAGAGAATCACAGGAAAGTGAGATTTGGAGCGACTGGCCATAGACATAAAGGGAAAAGGTTCAATTATCTTCATAAGCAAGGATGGAAAGAAAATCTTGGCCGATGTACTTTATACCAGACGAAGAGCAATATTATCAGCCTTGACAAGCTCACGAGTCTGGCTGTGATGTTCGAATGAAAGAAGACTATCTCACACTATATGATCGTGGCGAGAACACAAAGCCATCGGTCCAAGAACGCTTGTATAAAGTGACTATGGAGGTTGACAATACTAGGTGTCTTCAAGTCTCGAGATGATGATTCAGCCATTTGGCATGCGAGACTTGGGTGTAAGTCGAGAATCTATCTGCAGTATGGTGAGTAAAGAGATAGTTACGGGCATACCTAAACGAGCATTGAGAATGAGACTGCAGCGTCATGTAGGGCGGAGCGAAGAATTCAAAAGCCATTTGCATATCGGTGCCTCACACGTCTGGAGCTTATTCATGGAGACCTTTGGACCAATATCTCCAACAACGGCTTCCAAGAAGAGGTATGTGTTCAGATTGATTGATGATCATACCGGTATATGTGGTCTATATAAAAAGAAGA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2233

Start:

1835168  

End:

1837400

Strand:

+

>ChrB01_LTR-Copia_76

TTGGTATCAGAGCATTCTATTGAATTCTTAAACAAAATCCAAGAGGAGAAGTTCTGTGAGACATGGGGGACAAAGATATAGTTGCGATGACTATCAAGCCGAAGGAGAGTACTACAACCATACAATTCCCTATGCTCACCGCCACCAACTACACGGTGTGGAGCATGAGGATGAAGGTGGCGCTCAAGGTACATAAAGTATGGGAGATGATAGAACCGGGGATAGATGATGGAGACAAGAACGACATGGCTCGAGCATTGTTGTTTCAGTCCATACCAGAAGTCCTAATTCTACAAGTTGGGGATCTTGACACCTCAAAACTTGTGTGGGAAGCAATAAAAGCAAGGCATGTGGGAGCTGACAGAGTTCGTGAGGCTAGGTTACAAACACTCATGGACGAGTTTAGTCGATTGAAGATGAAAGACACAGAGACCATTGATGATTTCTCGGTAAACTTGCAGAGATGTCTTCAAAATCTTCAGCTTTAGGAGAAGACATAGAGGAATCTAAACTCGTCAAGAAATTTCTTAATAGCCTTCCGAGGAAGAAGTATATACATATCATAGCTGCTCTTGAACAGGTTCTAAACCTCAATACCACCAGCTTTGAAGATATTGTGGGCAGGCTAAAAGCCTATGAGGAGAGGATCGTAGATGATGATCAGCGATGATCAAGGAAAACTCATGTATGCCAATGCTGACTCCCAATCACAAACGAAACCTACGGAAGAGGAAGGGGCGTGGTGGGCGTTATGGTAACAGAGGAAGAGGGCGTGGACGATACAACAATCAGCAAGACTGGAAGCAAGGTAGAGATGCTTGGCGTGGTATGCTTGAAGCGATAAGACTGGCCACTATGCCTATCTATGTCCAGACCGGTTACTTAAGCTCCAAGAAACACAAGAGAATGATGCTGAGAGCACACACGAGGCTGAGGAGTTGATGATGAATGAAGTCGTGTATTTGAATGAGGAGAGTGTGATGCCAAGCAAGTTCAAAGCGTATGACTGGTATTATTTAGACAATGGCAAGCAATCACATGTCGTGTCGTGCTTACTTTGCAAAGATTGATGAGAGAATCACAGGAAAGTGAGATTTGGAGCGACTTCGGCATAGACATAAAAGGAAAAGGTTCAATTATCTTCATAAGCAAGGATGGAAAGAAGAAAATCTTGGCCGATGTCTACTTTATACCAGACTTGAAGAGCAATATTATCAGCCTTGGACAAGCTACAGAGTCTGGCTGTGATGTTCGAATGAAAGAAGACTATCTCACACTATATGATCGTGGCGAGAACTACTGGTGAAAGCCATCAGGTCCAAGAACCGCTTGTATAAAGTGACTATGGAGGTTGACAATACTAGGTGTCTTCAAGTCTCGAGATGATGATTCAGCCATTTGGCATGCGAGACTTGGGCATGTAAGTCGAGAATCTATCGCGAGTATGGTGAGTAAAGAGATAGTTACGGGCATACCTAAACGAGCATTGAGAATGAGACTGCGTCATATGCACGCTGAGGCAGACGCGAAGAAGCTTCCCTAAAACCCGCATATCGTGCCTCACACGCCCTGGAGCTTATTCATGGAGACCTTTATGGACCAATATCTCCAACAACGGCTTCCAAGAAGAGGTATGTGTTAGTATTGATTGATGATCATACGGTATATGTGGTCTATATTGTAGGAGGAGAAAGGAAGCTTTCGAAATTCAAAATCTTCAAGAAACTTGTGGAGCAAGAAACAAGAAGTATCATTGGTACACTCAGAACTGATAGGGTGGAGAATTTACTTCTCAAATTTTTCAAACCTTCGTGACCAGCATGGAATAAAATGTCATCGGACGCATTACTCACCTCAAAAGCGAGTCGTTGAGGAGAGAAACCGTACTAATGGAGATGACTCGCAGCATGATGAAACATATGAGTGTGCCAAGTTACTTGTGGGCGAAGCCGTAAGGCACTCAATGTATCTTATTAATAGAGTTGCGACAAGAACTCGGAAGCTACGACACCATATGAGTGCTGAAGAAGAAGCCAAACGTTGGACACTTGAGGGTTTTGGCTGCGTTTGCTATGCTAAGAATGAGGCACCACATCTCAGGAAGTTAGATGACAGATCAAGAGAGTTGGTACAGGAATTGAGCCAGGATCAAAAGCATACGGTTATATGATCCTACGAAGATTGTTGTGAGCAGATGTGATTTTATCGAAAATCAAAGATGGAAGTGGAATAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

227

Start:

1837499  

End:

1837725

Strand:

+

>ChrB01_LTR-Copia_77

GGAAACAGAGGAAACAGAGGAGGATCACATTCTTGAGAAGATCTACAAGGCAAACGCCGAGACCAAGTTATTTGGAGGATTATGTGTTGATGTTTGAGATAGTTGAGATCGAACGGATTCTTCGCTTATCAATGAGGAACCATGGGACTGGAGCGAGGCAAAAGACCGTAAGGTGTGGAGGAATGCTTGCGAAGAAGAGATTACCATCAAGAAGAATAGAACGTGGA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

625

Start:

1842053  

End:

1842677

Strand:

+

>ChrB01_LTR-Copia_78

TTGGAGTATTAAGTCGTTACATGCATGATCCAAGAAGCTCTCATGGAGCTGCACTGAAGCAAGTCCTTCGGTATTTGAAGGGAACGTGTTCTCTTGGACTCTTCTATGATAACGACGGAATGAAGGAGCTAATAGGATACAGTGACAGTAGCTATAATGTGGATCCCGATCATGGTAAAAGCACAACAGGTCACATTTTCTATCTAAACAATTTCCCAGTGACTTGGTGCTCTCAGAAGCAAGAAATTGTTGCTTTATCTTCCTGTGAGGCTGAGTATATGGCCGCTATAGAGACAGCCAAACAAGCTTTGTGGCTGTAGGAGTTACTTGAAGAGATTACTGAAGATGGAGTCGGAAAAACGGTGATACGCATTGATAACAAATCAGCAATCGCACTTGCCAAGAATCCGGTGTTTCATGGACGTAGTAAGCACATACACACAAGGTTTCACTTCATAAGAGAGTGTGTTGAAAAAGGCTTGGTGGTCGTTGAGCGTGTAGCCGGGAAGGAGCAGAAGGCTGATATACTAACCAAAGCACTTGGGAGAATCAACTTTAAAGACATGAGAAGTCTTATTGGAGTTCAAGATGTGTCAAATGGTGAGATCAAGCTTAAGGGGGAGAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

144

Start:

1897285  

End:

1897428

Strand:

+

>ChrB01_LTR-Copia_79

TCCCTAGGCCTTGGAGGCTCTACTCTTTTTCCCTTACAAGGTTTTGTCCCAAAGGGTTTTCCTTGTAAGGTTTTTAATGAGGGAGTTCTTCAAGGTTCCAAGCTTAACTCAGGATCTCCTAGAGTTAAGCTTGAGGGGGAGTGT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Copia_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

144

Start:

1900408  

End:

1900551

Strand:

+

>ChrB01_LTR-Copia_80

TCTCTAGGCCTTAGAGGCTCTACTCTTTTTCCCTTACAAGGTTTTGTCCCAAAGGGTTTTCCTTGTAAGGTTTTTAATGAGGGAGTTCTTCAAGGTTCCAAGCTTAACTCAGGATCTCCTAGAATTAAGCTTGAGGGGGAGTGT