ID Class Order Superfamily Length Start End Strand View
Contig959_LTR-Copia_89781 RetrotransposonsLTRLTR-Copia154204678204831+
Contig959_LTR-Copia_89782 RetrotransposonsLTRLTR-Copia126206831206956-
Contig959_LTR-Copia_89783 RetrotransposonsLTRLTR-Copia125206853206977+
Contig959_LTR-Copia_89784 RetrotransposonsLTRLTR-Copia215207030207244+
Contig959_LTR-Copia_89785 RetrotransposonsLTRLTR-Copia448207318207765+
Contig961_LTR-Copia_89786 RetrotransposonsLTRLTR-Copia409134067134475-
Contig961_LTR-Copia_89787 RetrotransposonsLTRLTR-Copia773138140138912-
Contig971_LTR-Copia_89788 RetrotransposonsLTRLTR-Copia271125591125861-
Contig971_LTR-Copia_89789 RetrotransposonsLTRLTR-Copia519126911127429-
Contig971_LTR-Copia_89790 RetrotransposonsLTRLTR-Copia739127187127925+
Contig971_LTR-Copia_89791 RetrotransposonsLTRLTR-Copia445128442128886-
Contig971_LTR-Copia_89792 RetrotransposonsLTRLTR-Copia438140843141280+
Contig973_LTR-Copia_89793 RetrotransposonsLTRLTR-Copia1444064940792+
Contig973_LTR-Copia_89794 RetrotransposonsLTRLTR-Copia2164146841683+
Contig989_LTR-Copia_89795 RetrotransposonsLTRLTR-Copia3501719817547-
Contig989_LTR-Copia_89796 RetrotransposonsLTRLTR-Copia90116381116470+

< 4486 4487 4488 4489 4490 > Total 4490


Brassica carinata (v1.0)

ID:

Contig959_LTR-Copia_89781

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

154

Start:

204678  

End:

204831

Strand:

+

>Contig959_LTR-Copia_89781

TACAAAATGATTGGTGGAGTTGCTAGAGGACTTCTTTATCTCCATGAAGACTCACGTTACCGGATCATTCACCGTGATCTTAAGGCTAGCAACATTCTTTTGGATCAGGAAATGAACCCGAAAATCGCGGATTTTGGATTAGCTAAGCTCTTTG

Brassica carinata (v1.0)

ID:

Contig959_LTR-Copia_89782

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

126

Start:

206831  

End:

206956

Strand:

-

>Contig959_LTR-Copia_89782

GCGGAGGATGAGTTCTCAAACACAGATTCTCTATTAGTTGACTTCGAAACTCTAAAGGCTGCAACAAACAACTTTTCTACTGAAAACGAACTTGGACGTGGTGGGTTTGGTTCAGTTTACAAGGTA

Brassica carinata (v1.0)

ID:

Contig959_LTR-Copia_89783

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

125

Start:

206853  

End:

206977

Strand:

+

>Contig959_LTR-Copia_89783

CAGATTCTCTATTAGTTGACTTCGAAACTCTAAAGGCTGCAACAAACAACTTTTCTACTGAAAACGAACTTGGACGTGGTGGGTTTGGTTCAGTTTACAAGGTAAACTTTCTTGGACAAGACTTC

Brassica carinata (v1.0)

ID:

Contig959_LTR-Copia_89784

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

215

Start:

207030  

End:

207244

Strand:

+

>Contig959_LTR-Copia_89784

AGGGTGTGTTCTCTCATGGACAAGAAATCGCTGTGAAAAGATTGTCAGGTACTTCAGGACAAGGAGACCTCGAGTTCAAGACCGAAATCGTACTACTTGCAAAGCTTCAACATAGGAACTTGGTTAGGCTTATAGGTTTCTGCATACATGGACAGGAAAGACTCCTTGTCTATGAGTTCATCAAAAACGCTAGTCTTGACCATTTCATATTTGGT

Brassica carinata (v1.0)

ID:

Contig959_LTR-Copia_89785

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

448

Start:

207318  

End:

207765

Strand:

+

>Contig959_LTR-Copia_89785

TGCAGATCTTGAGAAGTGCCAAGCTTTGGATTGGGGAGTGCGTTACAAAATGATTGGTGGAGTTGCTAGAGGACTTCTTTATCTCCATGAAGACTCACGTTACCGGATCATTCACCGTGATCTTAAGGCTAGCAACATTCTTTTGGACCAAGAAATGAACCCGAAAATCGCGGATTTTGGATTAGCTAAGCTCTTTGACCAAGGACTAACCATGACACATCGATTCACAAACAGAATCGCAGGCACTTAGTGAGTAAATTTTATCTTTACTAGCTTATTAAAATCATAAAGAAACACATGTATAAAGTGTTTATTTGATTTCATTTCATCTTGTAGCGGTTACATGGCTCCAGAATACGCAATGCACGGACAATTCTCAGTGAAAACAGACGTTTTCAGCTTTGGTGTGTTAGTCATTGAGATCATTACAGGTAAGAGAAACAGCAAT

Brassica carinata (v1.0)

ID:

Contig961_LTR-Copia_89786

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

409

Start:

134067  

End:

134475

Strand:

-

>Contig961_LTR-Copia_89786

TGTTGGGAAAATTATCGGATAATAATTTCTTTGAGAGGTTGAGATGGAATGTGGACGGTTAGTGTTTAAGATAACCTTCCTATTTTTGGGAAAGAGATTTTCACTAAGGCTTGTGTTTGGAGATTTCTTAAAGACTCTTAGAACTCTTTATGAAATGTTTTCTCTCTATTGCTTTGCTTGATGTGGAATGATTACAAATGGTGCTAAGCACCCCTATTTATACTAGTAAGTGGAGACTACAAGTTAGTTCTACACACTTCATCTTCTACACACTTCATCTTCTACACACTTCCTTTTTCTACACACTTCTTCATCTTTCTCCATTTTTCTTTAGATATTTCTTCTTCTTGGGCTTCTTGGTTATGGATCATAATTTTGGGTTTTGGGCTAATGGAGGAAAAAACCAACA

Brassica carinata (v1.0)

ID:

Contig961_LTR-Copia_89787

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

773

Start:

138140  

End:

138912

Strand:

-

>Contig961_LTR-Copia_89787

CGTCGAACAAGAAGAGCTTTGTTTCGAGGTGTTTTCTTTTGAATCATGGATTCAAGTTTTGTCCATAATTCAAAAGCATTTGTGTAGGTAGAGACATGTTCAAAGAGAGATCGGTCGACATACTTACGTATTACGGCAACCGCCTTTCTATTAAGAATCTCCCATGCTTTATCATCCTCTCCTTCCGGCTTATCCTTCATGATGATGGGCTCATGCAAATTCTTACAATAAAGGTGATCTTCCATCATCGGTTTCCAATAAGAGAAGTTGTCCGTCGTGAGCTTGAACATGTCACCTTCAACGGTAATGGTTGCCTCCATCTTCACTTCTTCAAAGATAACGGTAACCTTGCTCTGATACCAGCTGTTGGGAAAATTATCGGATAATAATTTCTTTGAGAGGTTGAGATGGAATGTGGACGGTTAGTGTTTAAGATAACCTTCCTATTTTTGGGAAAGGGATTTTCACTAAGGCTTGTGTTTGGAGATTTTTTAAAGACTCTTAGAACTCTTTATGAAATGTTTTCTCTCTATTGCTTTGCTTGATGTGGAATGATTACAAATGGTGCTAAGCACCCCTATTTATATTAGTAAGTGGAGACTACAAGTTAGTTCTACACACTTCATCTTCTACACACTTCATTTTTCTACACACTTCCTTTTTTTACACACTTCTTCATCTTTCTCCATTCTTCTTTAGATATTTTTTCTTCTTGGGCTTCTTGGTTATGGATCATAATTTTGGGTTTTGGGCTAATGGAGGAAAAAACCAAC

Brassica carinata (v1.0)

ID:

Contig971_LTR-Copia_89788

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

271

Start:

125591  

End:

125861

Strand:

-

>Contig971_LTR-Copia_89788

CTCATCCTCTCTTCTCTTCCTTCCAATGCCGCGGCTCAAGATGGCTTCTACAGCGGTTCCATTGGACAAGAACCTAGTCGAGTCTACGCGGCAGGGATGTGCATCCCTGGAGCAGAAGCAAACGATTGTTCCGCTTGTATAAAAGGTGATCTGACTGGTTGATACAAGATTGTACCAACCAGACAGACGCGTATTACTGGGCACTTGATCCAACTCTTTGCCTTGTCCGCTACTCCAACAATTCTTTTTCAGGATCCGCAGGTTATTGGGA

Brassica carinata (v1.0)

ID:

Contig971_LTR-Copia_89789

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

519

Start:

126911  

End:

127429

Strand:

-

>Contig971_LTR-Copia_89789

AGGGTACATTAATGCCTGGTGGAAAAGAAGTTGCAGTAAAAAGGTTGTCACGAACATCTGAACAAGGTGAGAAAGAGTTCAAGAATGAGGTTATTGTTATCGCAAAACTTCGGCATGGAAATCTTGTTAGACTTCTCGGTTTTTCTGTCAAAGGAGAAGAAAGAGTACTCGTATACGAGTTTGTGCCCAACAAAAGTCTAGACTGTTACCTCTCTGGTAAGAAACAAATGATGAAACTGTGTTAATCTATCTCATATTCTAATGGGTCCATATGAGATGTGCAGACCCAATAAAGCAAGCTCAGTAAAGCTGGACAAAACGGTTCAACATAATCAAGGGAATCGCTAGAGGGATACTATATCTTCATCAAGATTCAAGGCCCAAAATCATACATCGTGACCTCAAAGCAGATAACATACTCTTGGAAGCTGATATGAACCCGAAGATTTCTGACTTTGGGACGGCAAGGATCTTTGGTATGGACCAAACTAGTTCTATCACGAAAAGGGTAGTTGGAAC

Brassica carinata (v1.0)

ID:

Contig971_LTR-Copia_89790

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

739

Start:

127187  

End:

127925

Strand:

+

>Contig971_LTR-Copia_89790

ATGTGCAGACCCAATAAAGCAAGCTCAGTAAAGCTGGACAAAACGGTTCAACATAATCAAGGGAATCGCTAGAGGGATACTATATCTTCATCAAGATTCAAGGCCCAAAATCATACATCGTGACCTCAAAGCAGATAACATACTCTTGGAAGCTGATATGAACCCGAAGATTTCTGACTTTGGGACGGCAAGGATCTTTGGTATGGACCAAACTAGTTCTATCACGAAAAGGGTAGTTGGAACTGAGTAAGATACGCTTATTAGCCTTTATGACTTTATGAACTGGTTCTTTTATGAACATCACCGATATCTATACAATTAATATTGCAGAGGTTACATGCCCCAGAGTATAGGTGCGAGGGGCAATTCTCAGTGAAAACGTATAGCTTCGGGGTCTTAGTTCTTTGCGGGAAGAAGAATAGGAGCTTCTGCTCCCCGGGTCCAGATTTGGTCACATACGTGAGTACCTAAACTGAACATTTATATTAGCGAAAACGTGCATGTTATAAGCTATTTAATTGATGATTAAATTATTTTACAGGCTTGGAGGTTGTGGAGAGAGGAGACACCATTAGAACTCGTGGATCAAACCATTTTAGAGAATTTTCCAGCAGAAGAAGTGACAAGATGCATCCAGATCGCGCTGCTTTGTGTTCAACACGAACCAACAGACCGTCCCCATGTGTCAACAATCGTATCGATGCTCACTAGCACTCACATGTTCCTCAAACACCCGGAT

Brassica carinata (v1.0)

ID:

Contig971_LTR-Copia_89791

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

445

Start:

128442  

End:

128886

Strand:

-

>Contig971_LTR-Copia_89791

ATGTTGTTAGTTATTGTTATCTAAAGAACATAATGCTTAGTCTATTCAATTTTAACTAAGTTTTCTGGAAATCTTTTTCGTTTTAATCCATTATTAGTGATTTTGACTCATCTTTGGGCAATGTCAAATTCAAGTTAGTAATCATAATGTGAACTCAATTTTTTCTTTCCATTCTGAGCCATTCTTAGAAGTTAGTTCCGGTAACAAAATATAAGATACCGTAGGTATAAACTTTCCAACAAAAAATAACTATAGTTTTGAAATACAACAAATTTAAACTAGGCTTTTAAACATAATCAACACATACTTACATCGAATACATATGCAAAAAATTATGATGTTCATATGAGTAGCAACCATATTTTCATCATATAACCATGGTATTCAAAAACATATATGAGTGTGAATTACTTAAATTAAGTCATCTATGGATATACTTAGTCTA

Brassica carinata (v1.0)

ID:

Contig971_LTR-Copia_89792

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

438

Start:

140843  

End:

141280

Strand:

+

>Contig971_LTR-Copia_89792

AATTAATATTGCAGAGGTTACATGCCACCAGAGTATATGTGCGAAGGGCTATTCTCAATGAAAACGGATGTGTATAGCTTCGGGGTCTTAGTTCTTTGCGGGAAGAAGAATAGGAACTTCTGCTCCCCTCCCCGGGTCCAGATTTGGTCACATACGTGAGTACCTAAACTGAACATTTATATTAGCGAAAACGTGCATGTTATAAGCTATTTAATTGATGATTAAATTATTTTACAGGCTTGGAGGTTGTGGAGAGAGGAGACACCATTAGAACTCGTGGATCAAACCATTTTAGATAATTTTCCAGCAGAGGAAGTGACAAGATGCATCCACATTGCACTGCTATGTGTTCAACATGAACCAACAGATCGTCCCGATGTGTCGTCAATCATGTTGATGCTCACTAGCACCACCATCATGTTCCTCAACCACCTGGAT

Brassica carinata (v1.0)

ID:

Contig973_LTR-Copia_89793

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

144

Start:

40649  

End:

40792

Strand:

+

>Contig973_LTR-Copia_89793

AATGTTATGAACCAGATTGTGGATGACTCATAACCAAGAGATTATGATTTGTAATCTTTCCATTTATCTATGACGGTGTAATCTCCTATATAAGGAACATCTATTTTATGAATAAAGATAGACTTTTCCATTACTTTCACAACA

Brassica carinata (v1.0)

ID:

Contig973_LTR-Copia_89794

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

216

Start:

41468  

End:

41683

Strand:

+

>Contig973_LTR-Copia_89794

ATAACCTGAATGAATGATTTGAAGTTTGATATTGAATGTTAGAATCTGTTATAATATAAACCCTAATTCGAATTGATAAACCCTAAAATAGAATCTGTGTATTGCATAATCTGAATTGAATGTTTTGAGGTTTCATATTATACTAGGTTGATAGTTTCATGATATAATCAAATGTTTTGAGGTTTAAGATTATTTTCTAGAAGCTGATTGATTGAT

Brassica carinata (v1.0)

ID:

Contig989_LTR-Copia_89795

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

350

Start:

17198  

End:

17547

Strand:

-

>Contig989_LTR-Copia_89795

TGTTGTAAAACTGGACCGGATAGAGCAGGATCGCAGCTAATAATTTGAGAAATAGTGTAATAAATGGAACACCGGATTTAACGTGGAAAACCCCAAAGGGTAAAAACCACGGACAAGGTAGAAGAATTTATTACGAAAAAAATAATAGGAGTTACAACCTCTCAATTATAACGAGAAATCGATTAATAATTTTCGTTATAATAGGAGAAAATACCCAAACTCTCTAAATAATTTTCTCTCAACCCGATCCCAAATACCCGTAAGAGATTATAGATTTTTTTTTTCTCTCTCTCTCTCTCACGTTCTTCTTCTTCTTCTTCACTTCTCTTTGTGATTTTTATTTTGGGATG

Brassica carinata (v1.0)

ID:

Contig989_LTR-Copia_89796

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

116381  

End:

116470

Strand:

+

>Contig989_LTR-Copia_89796

AATCAATAGCAGTTTATATATTTAAAAGAAATAATAATTGGATTCAAATAATATCAGTTGAACATGTTGCTGTTTTAATAGTATTGATGT