TBGR-Browse-Bca-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
ChrC09_LINE_161	Retrotransposons	LINE	LINE	91	20729571	20729661	+
ChrC09_LINE_162	Retrotransposons	LINE	LINE	99	26900280	26900378	+
ChrC09_LINE_163	Retrotransposons	LINE	LINE	353	38098437	38098789	+
ChrC09_LINE_164	Retrotransposons	LINE	LINE	87	45257213	45257299	-
ChrC09_LINE_165	Retrotransposons	LINE	LINE	118	46143480	46143597	-
Contig1222_LINE_166	Retrotransposons	LINE	LINE	91	113258	113348	-
Contig1591_LINE_167	Retrotransposons	LINE	LINE	107	2656	2762	+
Contig2172_LINE_168	Retrotransposons	LINE	LINE	109	5172	5280	+
Contig2557_LINE_169	Retrotransposons	LINE	LINE	85	11913	11997	-
Contig2891_LINE_170	Retrotransposons	LINE	LINE	97	8772	8868	-
Contig365_LINE_171	Retrotransposons	LINE	LINE	107	656396	656502	-
Contig456_LINE_172	Retrotransposons	LINE	LINE	131	240354	240484	-
Contig469_LINE_173	Retrotransposons	LINE	LINE	107	157698	157804	-
Contig655_LINE_174	Retrotransposons	LINE	LINE	116	21866	21981	+
Contig832_LINE_175	Retrotransposons	LINE	LINE	112	44454	44565	+
Contig948_LINE_176	Retrotransposons	LINE	LINE	109	60634	60742	-

Brassica carinata (v1.0)

ID:

ChrC09_LINE_161

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

20729571

End:

20729661

Strand:

+

>ChrC09_LINE_161

TGCTCTACTTTCTTTGTCTTCCTTGTATTTCTGTCAAAAACTGAAAAACTTTGGTAATAATATCTTTACATTTTTACCAAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC09_LINE_162

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

99

Start:

26900280

End:

26900378

Strand:

+

>ChrC09_LINE_162

TTGCTTTAGTTTATTTTCATCTGCTACTAGTTTGCTTTGTAACTTCTGTCACAAAAGAAAATGGTATAAAATTTAACATTTTTACCAAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC09_LINE_163

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

353

Start:

38098437

End:

38098789

Strand:

+

>ChrC09_LINE_163

TTGTCTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGCGCTACCCGCGTTTGAGGTTTTGAGGGCGGCCTTAAATGGTGATGCTCGTGGCAACGACGATGAGGACTCAAGATCTTAGGATCTGTGGCAACAACACAAATGTCCGAGTTTTAGGGTTTGGAATCGGTGTTTCTACATGTTGGATCTTCTAGTTGCTTAGATGTGTTCTTGTTGATTGTGACCACTTTTTGGTTTCTGTTGTTACTTAGTCTTAGTTTTAGATTTTAGTTACTCTGCTTTCTTTGTCTTTCTCTGTAATTGCTGTCAAAAATTAAAATTGGTATAAAATTTAACATTTTACCAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC09_LINE_164

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

45257213

End:

45257299

Strand:

-

>ChrC09_LINE_164

TTTTTTTTTCTTTGGTAAAAATGTTAAAATTCATTACCAGATTTTAAGTTTTTTTACAGACAAACAGGGGAAACAAGAAGCGGAGTA

Brassica carinata (v1.0)

ID:

ChrC09_LINE_165

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

118

Start:

46143480

End:

46143597

Strand:

-

>ChrC09_LINE_165

TTTTTTTTCTTGGTGTGAATGTTAAATTTGGTACCATTTCAGAATTTTTGACAAAAAAATACAAAGAAAAACCAGTAACAGGAACAAGTAAAAACAACTACACAACACCAAAATACAA

Brassica carinata (v1.0)

ID:

Contig1222_LINE_166

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

113258

End:

113348

Strand:

-

>Contig1222_LINE_166

TTTTTTTTTGTTGATAAAAAAGTTAGGATTTCATACCATTTTCAGAGATTTGAGACAGAAAATATATGGATACACGTAGCAGAAAATTGAA

Brassica carinata (v1.0)

ID:

Contig1591_LINE_167

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

2656

End:

2762

Strand:

+

>Contig1591_LINE_167

TGTTGCTTTAAATTTATATTTTTTTTCATTCCGCTATTTGTGTTCTATGTAATTTCTGTCATCAAGAAAATTTGGTATAAAATTTAACATTTACATCAAAAAAAAAA

Brassica carinata (v1.0)

ID:

Contig2172_LINE_168

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

5172

End:

5280

Strand:

+

>Contig2172_LINE_168

TGAGTAGGTGTTTTAGTTTAAATATTTTGCATCTGCTTCTCCATGTTTCTATGTAGTTCTGTCAAAAAAAATGGTAATAAATTTTAACTTTTTTACCAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

Contig2557_LINE_169

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

11913

End:

11997

Strand:

-

>Contig2557_LINE_169

TCTTTTTTTGGTAAAAATGTTAAAATTTCATTACCAATTTTAAATGTTTTACAGACATTGACAGAGAATACTAATAGCAGATCAA

Brassica carinata (v1.0)

ID:

Contig2891_LINE_170

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

97

Start:

8772

End:

8868

Strand:

-

>Contig2891_LINE_170

TTTTTTTTGGTAAACATGTTAAAATTGTATTTACCGTTTTCAATTTTTTACAGAAGTTACTGAAGAATACAGGTAGCGGAGAAGAACAACACAACAG

Brassica carinata (v1.0)

ID:

Contig365_LINE_171

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

656396

End:

656502

Strand:

-

>Contig365_LINE_171

GAAACACCAATTCCGAGCATTGAACTCGGACATTTGCAAAGTTGCCGCAGATCCGAAGAACTGGAGTCCTCATCGTTGTTGCCACGAACTCCTCCTTCCGAGGCCGT

Brassica carinata (v1.0)

ID:

Contig456_LINE_172

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

131

Start:

240354

End:

240484

Strand:

-

>Contig456_LINE_172

TTTTTTTTTGATAAAATGTTAAATTATTATACCAACTTTTCAAGTTTTCGACAGACATTACAACGCAAACTACTAGCAGAGATGCATAATAAAACTAAAACAAAAGGCAATTTACAACAATATTAACACTC

Brassica carinata (v1.0)

ID:

Contig469_LINE_173

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

157698

End:

157804

Strand:

-

>Contig469_LINE_173

TTTTTTGTTTTTTGGTAAAATGTTAAATTATTATACCAATTTTTGGATTTGTGACAGAAGATACAAAAACAACTTGTAGCGGAGAACAGAAAATAAACTAAACAACA

Brassica carinata (v1.0)

ID:

Contig655_LINE_174

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

116

Start:

21866

End:

21981

Strand:

+

>Contig655_LINE_174

TGTTGTGTTATAGTTTTTTTTTGGTGTTTGTCTTCTGCTACTAGTGATTCTCTGTAACTTCTGTCACAAACTTTAAAATGGTAATGCAATCTTAACATGTTTACCAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

Contig832_LINE_175

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

112

Start:

44454

End:

44565

Strand:

+

>Contig832_LINE_175

TTGAGTCGTTGTTTAGTTTTTTTTCTTGTTTTCTGCTTCGCGTTATTCTCTGTAATTCTGTCAAAACGAAAATTGGTAATAATATCTTTACATTTTACCAAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

Contig948_LINE_176

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

60634

End:

60742

Strand:

-

>Contig948_LINE_176

TTTTTTTTTTTTGGTAAAAAAGTTAAAATTTATTACCATTTTTTTTGACAGAACTACATAGAAACATGGAGAAGCAGATGCAAAATATTTAAACTAAAACACCTACTCA