TBGR-Browse-Bca-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
ChrC03_LINE_81	Retrotransposons	LINE	LINE	89	21874592	21874680	-
ChrC03_LINE_82	Retrotransposons	LINE	LINE	374	23754325	23754698	-
ChrC03_LINE_83	Retrotransposons	LINE	LINE	366	23786505	23786870	+
ChrC03_LINE_84	Retrotransposons	LINE	LINE	365	23796644	23797008	-
ChrC03_LINE_85	Retrotransposons	LINE	LINE	83	28036749	28036831	-
ChrC03_LINE_86	Retrotransposons	LINE	LINE	84	29336673	29336756	-
ChrC03_LINE_87	Retrotransposons	LINE	LINE	87	30579676	30579762	+
ChrC03_LINE_88	Retrotransposons	LINE	LINE	114	38064515	38064628	+
ChrC03_LINE_89	Retrotransposons	LINE	LINE	101	43250481	43250581	+
ChrC03_LINE_90	Retrotransposons	LINE	LINE	110	54796702	54796811	-
ChrC04_LINE_91	Retrotransposons	LINE	LINE	85	1597674	1597758	-
ChrC04_LINE_92	Retrotransposons	LINE	LINE	113	7152215	7152327	-
ChrC04_LINE_93	Retrotransposons	LINE	LINE	87	9211046	9211132	-
ChrC04_LINE_94	Retrotransposons	LINE	LINE	107	12578313	12578419	-
ChrC04_LINE_95	Retrotransposons	LINE	LINE	180	25483153	25483332	+
ChrC04_LINE_96	Retrotransposons	LINE	LINE	98	26226062	26226159	-
ChrC04_LINE_97	Retrotransposons	LINE	LINE	155	26226243	26226397	-
ChrC04_LINE_98	Retrotransposons	LINE	LINE	134	26242681	26242814	-
ChrC04_LINE_99	Retrotransposons	LINE	LINE	117	36847348	36847464	+
ChrC04_LINE_100	Retrotransposons	LINE	LINE	106	45296420	45296525	-

Brassica carinata (v1.0)

ID:

ChrC03_LINE_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

89

Start:

21874592

End:

21874680

Strand:

-

>ChrC03_LINE_81

TTTTTTTTTTTTGGTAAAAAATGTTAAGATTTCATTACCAGTTTTAAGTTTTTTACAGACGTTGACAGAGAATACTGATAGCAGATCAA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

374

Start:

23754325

End:

23754698

Strand:

-

>ChrC03_LINE_82

TCTTTTTTTTGGGTAAAATGTCAATTTTATACTAGTTTTAATTTTTTGGTAAAATGACAGCAATTACAGAGAAAACAAAAAAATCAGAATAGCTAAAATCTAAAACTAAGATTAAATAACAACAGAAACCAAAAAATGGTCACAGTCAACAAGACACATCTAAGCAACTAGAAGATCCAACATGTAGAAACACCGATTTCAAACCCTAAAGCTCGGACATTTGTGTTGTTAACACAGATTCTAAGATCTTGAGTCCTCATCGTCGTTGCCACGAGCCACGAGCATCACCACCTAAGGCCGCCCTCAAAACCTCAAACGCGGGTAGCATTTACAGCTTCTTCGAAGACTAACACAAAAACGAGACAACTTCAAAC

Brassica carinata (v1.0)

ID:

ChrC03_LINE_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

366

Start:

23786505

End:

23786870

Strand:

+

>ChrC03_LINE_83

GTTTGAAGTTGTCTGCTTTTGTGTTAGTCTTCAAGAAGCTGTAAATGCTACCCGCTTGAGGTTTTGAGGGCTGCCTTAGGTGGTGATGCTCGTGGCTCGTGGCAACCAATTTATGAGGACTCAAGATCTTAGAATCTGTGTTAACAACACAAATGTCCGAAGCTTGTGGTTTGAAATCGGTGTTTCTACATGTTGGATCTTCTAGTTGCTTAGATGTGTCTTGTTGACTGTGACCATTTTTGGTTTCTGTTGTTATTTAATCTTAGTTTTAGATTTTAGCTATTCTGATTTTTTGTTTCTCTGTAATTGCTGTCATTTTACCAAAAATTAAAACTAGTATAAAATTGACATTTTACCCAAAAAAGA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

365

Start:

23796644

End:

23797008

Strand:

-

>ChrC03_LINE_84

TCTTTTTTGGGTAAAATGTCAATTTTATACTAGTTTTAATTTTTGGTAAAATGACAGCAATTACAGAGAAAACAAAAAATCAGAATAGCTAAAATCTAAAACTAAGATTAAATAACAACAGAAACCAAAAATGGTCACAGTCAACAAGACACATCTAAGCAACTAGAAGATCCAACATGTAGAAACACCGATTTCAAACCCTAAAGCTCGGACATTTGTGTTGTTAACACAGATTCTAAGATCTTGAGTCCTCATCGCCGCTGCCACGAGCCACGAGCATCACCACCTAAGGCGCCTCAAAACCTCAAACGCTGGTAGCATTTACAGCTTCTTCAAGACTAACACAAAACGAGACAACTTCAAAC

Brassica carinata (v1.0)

ID:

ChrC03_LINE_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

28036749

End:

28036831

Strand:

-

>ChrC03_LINE_85

TTTTTTTTTTTTTGGTAAAAATGTTAAATTTTATTACTATTTTTCATTTGAGACAGAAGTTTACAAAAATACTAGTAGCAGAT

Brassica carinata (v1.0)

ID:

ChrC03_LINE_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

84

Start:

29336673

End:

29336756

Strand:

-

>ChrC03_LINE_86

TTTTTTTATTGGTAAATGTTAAATTATTATACCAATTTTTGGGTTTTTGACAGAAATTACACAAAACACTAGTAGCAGAAAGCA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

30579676

End:

30579762

Strand:

+

>ChrC03_LINE_87

CTTTATCCGCTTCTGGTTTTCCTTGTAATTTCTGTCAAAAACAAAAATTTGGTATAAAATTTAACATTTACACCCAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

114

Start:

38064515

End:

38064628

Strand:

+

>ChrC03_LINE_88

TTGTATTTCGTTGTTGTTTAGCTTGCTTTCAATTTGTCCGCTACATGTCTCTGTAACTTCTATAAAAAACTCAAAAAAATGTATAATATTTAACATTTTACCCCAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

101

Start:

43250481

End:

43250581

Strand:

+

>ChrC03_LINE_89

TTGCTTTAGTTTACTTTAATGTGCTACTAGTTTACTATGTAACCTCTGTGGCAAACAAAAACTGGTATAAAACTTTAACATTTTTACCAAAAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC03_LINE_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

110

Start:

54796702

End:

54796811

Strand:

-

>ChrC03_LINE_90

TTTTGTTTTTTTTTGTAACAATGTTAAATCTTTATTACCATTTTCAAGTTTTAGATAGAACTACAAGGGATACAAGGAACAGAAGATGCAAGAAATTAAGCTAAACAACA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

1597674

End:

1597758

Strand:

-

>ChrC04_LINE_91

TTTTTTTTTTTTTGGTAAAAATATTAAGATATTGTTACCAAGGTTTTTCGTTTTTGACAGAATTACAGAGACGACAAGAAACGGA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

113

Start:

7152215

End:

7152327

Strand:

-

>ChrC04_LINE_92

TTTTTTTTTTTTAAGTAAAATGTTAAATATTATACCAATTTTAAGTTTTTGACAGAAGATACAGAGAAGGACTAGTAGCGGAAATTAAACAACAACAGATACTACAGACAACA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

9211046

End:

9211132

Strand:

-

>ChrC04_LINE_93

TTTTTTTTTTTTTGGTAAAATGTTAAAATTATATTACCAGTTTTCAATTTTTTACAGAACAACAAAGAGAATAAGAAGATGAATGCA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

12578313

End:

12578419

Strand:

-

>ChrC04_LINE_94

TCTTTCTTTTTGGTAAAATGTAAAGATATTATTACCAATTTTCGTTTTTGACAGAATTACAGAGAATAACGCGAAGCAGAGAACAAGAAAAAAAACTAAACAACGAC

Brassica carinata (v1.0)

ID:

ChrC04_LINE_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

180

Start:

25483153

End:

25483332

Strand:

+

>ChrC04_LINE_95

GTTTGAAGTTGTCTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGCTCTATCCGCGTTCGAGGTTTTGAGGGCGGCCTTGAGTGGTGATGCTCGTGGCAACGACGATGAGGACTCAAGATCTTAGGATCTGTGGCAACAACACAAATGTCCGAGCTTTAAGTTTGGAATTGGTGTTTC

Brassica carinata (v1.0)

ID:

ChrC04_LINE_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

98

Start:

26226062

End:

26226159

Strand:

-

>ChrC04_LINE_96

TTTTTTTGGTAAAATGTTAAATTTTATACCAATTTTAAATTTTTGACAGAATACAAAAAATAAACAAAGAGATCAGAAAACCGAAAAACTACAAAAAA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

155

Start:

26226243

End:

26226397

Strand:

-

>ChrC04_LINE_97

AAACACAGATTCCAAACCCTGAATTCGGATATTTGCGTGATTGCCAAAGCTTTTTAGAACTTCAGTCCTCATCTTAGTTGCCACGAGCATTCCACCAGAGGCCAGCCCTCAAACCTCATAATAGTAAAATACCTACAAGGACTAACGCAAAAATG

Brassica carinata (v1.0)

ID:

ChrC04_LINE_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

134

Start:

26242681

End:

26242814

Strand:

-

>ChrC04_LINE_98

AATTCGGAAATTTGCGTGATTGCCAAAGCTTTTTAGAACTTGAGTCCTCATCTTAGTTGCCACGAGCATTCCACCAGAGGCCAGCCCTCAAACCTCATAATAGTAAAATACCTACAAGGACTAACGCAAAAATG

Brassica carinata (v1.0)

ID:

ChrC04_LINE_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

117

Start:

36847348

End:

36847464

Strand:

+

>ChrC04_LINE_99

TGTTGTTGTGTAGTTGTTTCGGTGTTGTTTTTTTTTCCGCTACTTGTTTTCTCTGTATCGTCTGTCAAAAATTCGAAAATTGGTAAAAATATTTTAACAGTTTACCTAAAAAAAAAA

Brassica carinata (v1.0)

ID:

ChrC04_LINE_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

45296420

End:

45296525

Strand:

-

>ChrC04_LINE_100

TTTTTTTTTTGTTGGTAAAATGTTAAATTTTATACCAAGATTTTTAAGTTTTGGCTGAAGTTACAGGAAAAACTAGAAGCAGAAATTACAGAAAATAAACTAAACA