ID Class Order Superfamily Length Start End Strand View
scaffold_7_LTR_61 RetrotransposonsLTRLTR15231529471815296240-
scaffold_7_LTR_62 RetrotransposonsLTRLTR6291530561415306242-
scaffold_7_LTR_63 RetrotransposonsLTRLTR18681530634515308212-
scaffold_7_LTR_64 RetrotransposonsLTRLTR2781530821315308490-
scaffold_7_LTR_65 RetrotransposonsLTRLTR11091530848615309594-
scaffold_7_LTR_66 RetrotransposonsLTRLTR2971536415815364454+
scaffold_7_LTR_67 RetrotransposonsLTRLTR2491778539117785639+
scaffold_7_LTR_68 RetrotransposonsLTRLTR1341778672717786860+
scaffold_7_LTR_69 RetrotransposonsLTRLTR4891784480217845290+
scaffold_7_LTR_70 RetrotransposonsLTRLTR4891789899217899480-
scaffold_7_LTR_71 RetrotransposonsLTRLTR1481987625219876399-
scaffold_729_LTR_72 RetrotransposonsLTRLTR185311853-
scaffold_729_LTR_73 RetrotransposonsLTRLTR87636904565-
scaffold_8_LTR_74 RetrotransposonsLTRLTR1871037348710373673+
scaffold_8_LTR_75 RetrotransposonsLTRLTR2011491470314914903+
scaffold_8_LTR_76 RetrotransposonsLTRLTR43701631404416318413-
scaffold_8_LTR_77 RetrotransposonsLTRLTR3591631954016319898-
scaffold_86_LTR_78 RetrotransposonsLTRLTR29647975092+
scaffold_86_LTR_79 RetrotransposonsLTRLTR29682808575+
scaffold_868_LTR_80 RetrotransposonsLTRLTR5131513+

< 1 2 3 4 5 > Total 5


Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1523

Start:

15294718  

End:

15296240

Strand:

-

>scaffold_7_LTR_61

GACGGCGAGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAGACTCCAAAGAGATGATTTGCAAGGGTGGGTAGCGACAACCGGTGAGTATCTCGAACCGGTGGTGACTTGGAGAAGAGGGGTGTGAAGGCGGAACGAGGTAACGACACACGAGAGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGGCTCTAAGGAGCTCTCAATGTTTTCGCAACAAATGAGAAAAGGAAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

629

Start:

15305614  

End:

15306242

Strand:

-

>scaffold_7_LTR_62

GACGGCGAGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAGACTCCAAAGAGATGATTTGCAAGGGTGGATAGCGACAACCGGTGAGTATCTCGAACCGGTGGTGACTTGGAGAAGAGGGGTGTGAAGGCGGAACGAGGTAACGACACACGAGGGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGACTCTAAGGAGCTCTCAATGTTTTCACAACAAATGAGAAAAGGAAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1868

Start:

15306345  

End:

15308212

Strand:

-

>scaffold_7_LTR_63

GGCTTGAAAATCATGGCCTTGCGGTGTAGGTTGGCTATTCGCACGTATAGCTCGGTTCTTCTTTCTAGATATTCCCGGACTTCGGTGTGTAACTTCTTGATCAGTTCGGCCTTGGCTAATCCGTCTTGACATTCTATCTCATTGGGTGGTAAGGGTAGCAAACTCGCGGGGGTTAAAGGTTTGAATCCGTAGGACACTTCAAATGGAGACTTCTTCGTTGCCGAATGCACGGACTGATTGTATGCGAACTCCATA

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

278

Start:

15308213  

End:

15308490

Strand:

-

>scaffold_7_LTR_64

GCGGTACGGCAAGTGATGCAACGGCCTACGAACTTCTCGACCATCCGCTTCATCTTAGGCCAATAGAAATGTTCCTTTAAGACTTCCAAAGTCTTAATAACCCCAAAATGCCCGGTTAGGCCTCCTCCATGTGACTCTTGCATTAGTAGGGTCCTAATAGATCTGGCGGGTATGCAAAGCCTTTTGTCCCGAAAGAGAAACCCGTCTTGGATGTAGAACCGTGAGTGAATTCCTTTGCCGTGATCCCTATAACTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1109

Start:

15308486  

End:

15309594

Strand:

-

>scaffold_7_LTR_65

TCTTTCTTAGGTACTAGGAGAACTGGTACGGCACAAGGGCTAAGGCTCTCTCGGACATATCCTTGCTTCATGAGGTCTCCCACTTGCTTCTCTAGTTCTTTAGCTTCGGTTGGGTTGACTCTATAGGCGGGTCTATTTGGCAATTGAGCTCCCGGAATAAGATCTATTTGATGTTCAATCCCTCGGATAGGTGGCAAGCCATGCGGTAGTTCTTCCGGAAACACATCTTGAAAACGCTTGATGATGGCCTTAATC

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

297

Start:

15364158  

End:

15364454

Strand:

+

>scaffold_7_LTR_66

CTATGGACTTTGTGGTTGGTTTGCCTGTGTCACGGACCAAGGATGTTATTTTGGGTGATCGTGGACCGTCTGACTAAGTCAGCACATTTTCTGGCCATCAGAAAGACCGATGGAGTGGCGGTTTTGGCTAAGAAGTATGTGAGCGAGATCGTGAAGTTGCATGGAGTACCTGTGAGTATTGTGTCGGACAGGGACCCCAGGTTTACTTCAGCTTTCTGGGATGCCTTTCAGGCAGAGATGGGCACTAAGGTGCAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

249

Start:

17785391  

End:

17785639

Strand:

+

>scaffold_7_LTR_67

TACAAAAGAAGTTCAGGAAACTCACTCATGGAACCAAATCTGTTGAAGAATACTATGAGGAGTTTGAATTACTTAAGAATAGATTGGAAGTAGAAGAATCTGAAGAGAATTTGATGGCACAGTTTCTGGATGGACTCCACGATCGAATTGCTAGGAAGGTAGAGAGGCGGACCTACCATGTTATGGATGAGTTGTTACATCTAGCAGTTCAGACTGAACAACACATCAAGAGAAAGACTGCTTCAAGCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

134

Start:

17786727  

End:

17786860

Strand:

+

>scaffold_7_LTR_68

GAAGCAAGATTAGGATCTATGTCAAAGGGATACATCCGTGAAAGTCTAAGTCCTTGTGCTATCCTTCTAGTACCTAATAATGATGGAACTTGGAGACTATGTGTCGACTGCCGAGCAATCAACAACATTACCAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

489

Start:

17844802  

End:

17845290

Strand:

+

>scaffold_7_LTR_69

CCTACTTTTGCAGGAAAATCTGATCTAGAGGTCTACATGGATTGGGAGAGACGTCTAGAGCATATATTTGAGTGTTATAGCTATGGAGAACGCAGGAAAGTAGCTGTTGCAGCCGCGCAGCTCACTGACAATGCACTCGCATGGTGGGACAGAAACGTGGCTGAGAGAAGGAGGCAACGTTTTGGACCAGTAGTGACATGGAGTGACATGAAATACCTTCTACGGCTTAGGTATGTTCCTGAACACTACCATAGA

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

489

Start:

17898992  

End:

17899480

Strand:

-

>scaffold_7_LTR_70

CTTTATCTGTTGTTCTACTTGGGCAGCTAGATGCAACAGCTCATGCAATCCACTATACTGCGCTCTCTCTACCTTCCTTTGAATTCTTTCATGCAGGCCGTCTATGAATTGGGCCATCAATGCTTCCTCAAACTCCTCTAGCTCTAGGGAGTTCATAAGCTTCTCAAATTCCTCAAAGTACTCATCTACGCTTCTGGTTCCCTGAGACAACTTACGAAAACGTTTTTGTAAGTCTCTATGGTAGTGTTCAGGAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_LTR_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

148

Start:

19876252  

End:

19876399

Strand:

-

>scaffold_7_LTR_71

TTGTCCATCCGTCTGAGGATGAAAAGCCGTACTCAGATGCACATTAGTGCCCATCTCCGCCTGGAACGCCCTCTAGAATGCTGAAGTGAACTTAGGATCTCGGTCTGACACTATACTCACTGGTACTCCATGACGTCTCACTACCTCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_729_LTR_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1853

Start:

1  

End:

1853

Strand:

-

>scaffold_729_LTR_72

GTCTTCTCAAAACTTGGTAGAACTAGGAGAGGCGCTTGTGTTAATCTCCTCTTTAGCTCTTGAAATGACGCTTCTTGACTCGGTCCCCAAGTGAATTCTTCATTCTTCTTAGTGATTGCGGTAAGAGGTGCGGCTACGGTGCTAAAGTCCTTGACAAAACGCCGGTAGAAACTTGCTAAACCATGAAAGCTTCTCACTTGACTAACGGTTGTCGGTGTAGGCCATTCCTCTATTGCTCGAATTTTCTCTTGATCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_729_LTR_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

876

Start:

3690  

End:

4565

Strand:

-

>scaffold_729_LTR_73

AGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAGACTCCAAAGAGATGATTTGCAAGGGTGGGTAGCGACAACCGGTGAGTATCTCGAACCGGTGGTGACTTGGAGAAGAGGGGTGTGAAGGCGGAACGAGGTAACGACACACGAGGGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGACTCTAAGGAGCTCTCAATGTTTTCGCAACAAATGAGAAAAGGAAAGGACTGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_LTR_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

187

Start:

10373487  

End:

10373673

Strand:

+

>scaffold_8_LTR_74

ACGGACCATTCAAAATCGCGGAGAGGATTAACGACAACGCCTACCGTCTCGAATTACCAGGTGAGTTTAACATATCACATACCTTCAACGTCACTGACTTGGAGAGTTTTGCTGTAGATAATGGAGACGTTTTGGGGTCAAAACCTCTTCAAAAAGGAGGGAATGATGAGGATATCACCTCACCGGA

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_LTR_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

201

Start:

14914703  

End:

14914903

Strand:

+

>scaffold_8_LTR_75

GTGATCAGCCCGGTCAAAGCCTAGTTGGCGACGAGGTTCTTACTGGTTCTAATTACCATATTTGGCTCCCTCTAATGACCTTAGATTTGAGAGTCAAGAACAAGATTCGTTTTGTTGATGGAACACTTCCGGAAACCACCTGCCAATGATCAAACATCCACTATGTGGTCTTGTTGTAATAGCATGGTGATGTCGTGGATT

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_LTR_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4370

Start:

16314044  

End:

16318413

Strand:

-

>scaffold_8_LTR_76

GACGGCGAGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAGACTCCAAAGAGATGATTTGCAAGGGTGGATAGCGACAACCGGTGAGTATCTCGAACCGGTGGTGACTGGAGAAGAGGGGTGTGAAGGCGGAACGAGGTAACGATACACGAGAGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGGCTCTAAGGAGCTCTCAATGTTTTCGCAACAAATGAGAAAAAGGAAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_LTR_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

359

Start:

16319540  

End:

16319898

Strand:

-

>scaffold_8_LTR_77

ACGTACGGTTGCTGTCGTGGTCCGTTTGGTCCGTACGGCTAGCGAGGTTTGTTCCACCTGTCCCAAACAAAGAACACGTGCGTTTTAAGGTTGCGATATGTTGATAAGATGGAATCAATTTCAAAAGAGGTGACAGCTCATGATTGGAGAGAGAACGGTCAAAAAGCAAAAGAAACAACCTAAGACCAAAACGAAAACGCTAGAGGACAAACGGTACGAAACCGTGTGACCCAAAACGATACACGTGGTTTCAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_86_LTR_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

296

Start:

4797  

End:

5092

Strand:

+

>scaffold_86_LTR_78

CTATGGACTTTGTGGTTGGTTTGCCTGTGTCACGGACCAAGGATGTTATTTGGGTGATCGTGGACCGTCTAACTAAGTCAGCACATTTTCTGGCCATCAGAAAGACCGATGGAGTGGCGGTTTTGGCTAAGAAGTATGTGAGCGAGATCGTGAAGTTGCATGGAGTACCTGTGAGTATTGTGTCGGACAGGGACCCCAGGTTTACTTCAGCTTTCTGGGATGCCTTTCAGGCAGAGATGGGCACTAAGGTGCATT

Arabidopsis lyrata (v2.1)

ID:

scaffold_86_LTR_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

296

Start:

8280  

End:

8575

Strand:

+

>scaffold_86_LTR_79

CTATGGACTTTGTGGTTGGTTTGCCTGTGTCACGGACCAAGGATGTTATTTGGGTGATCGTGGACCGTCTGACTAAGTCAGCACATTTTCTGGCCTTCAGAAAGACCGATGGAGTGGCGGTTTTAGCTAAGAAGTATGTGAGCGAGATCGTGAAGTTGCATGGAGTACCTGTGAGTATTGTGTCGGACAGGGACCCCAGGTTTACTTCAGCTTTCTGGGATGCCTTTCAGGCAGAGATGGGCACTAAGGTGCATT

Arabidopsis lyrata (v2.1)

ID:

scaffold_868_LTR_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

513

Start:

1  

End:

513

Strand:

+

>scaffold_868_LTR_80

AAGACATCGCATTGTGGCCTTACCAATGAGTATACTTTTATCGATAATGAGTAAACGGATTTGCTTAAAGCCTTTGTCACCCACCCAAGTCAATGAAATGCAATCGAAAATGTCTAGTGAACCTAGCTCTAAGTCGAATTTCTTGGTTAATTCTAGTGATGTTAGGAGATCACTATGTGACTCCTCTTGCCAAGTGTTACTAATGGTCTTTAAAGATGTTTTGACTATAGATTGTGAAGGCAAGGACATTCCGGA