ID Class Order Superfamily Length Start End Strand View
scaffold_2_LTR_21 RetrotransposonsLTRLTR249573469657349459+
scaffold_2_LTR_22 RetrotransposonsLTRLTR23173494557349685+
scaffold_2_LTR_23 RetrotransposonsLTRLTR65573496867350340+
scaffold_2_LTR_24 RetrotransposonsLTRLTR29973503327350630+
scaffold_2_LTR_25 RetrotransposonsLTRLTR210573506267352730+
scaffold_2_LTR_26 RetrotransposonsLTRLTR45582196078220061-
scaffold_2_LTR_27 RetrotransposonsLTRLTR96682558268256791+
scaffold_2_LTR_28 RetrotransposonsLTRLTR3031060495310605255-
scaffold_2_LTR_29 RetrotransposonsLTRLTR1011298309612983196+
scaffold_3_LTR_30 RetrotransposonsLTRLTR354854103255413872+
scaffold_3_LTR_31 RetrotransposonsLTRLTR581554139275419741+
scaffold_3_LTR_32 RetrotransposonsLTRLTR212254197965421917+
scaffold_3_LTR_33 RetrotransposonsLTRLTR1421744506417445205-
scaffold_3_LTR_34 RetrotransposonsLTRLTR1071837533918375445+
scaffold_3_LTR_35 RetrotransposonsLTRLTR882032731220327399-
scaffold_3_LTR_36 RetrotransposonsLTRLTR17392436085624362594-
scaffold_3_LTR_37 RetrotransposonsLTRLTR14152436258224363996-
scaffold_3_LTR_38 RetrotransposonsLTRLTR8762436582524366700-
scaffold_3_LTR_39 RetrotransposonsLTRLTR43082437861624382923-
scaffold_3_LTR_40 RetrotransposonsLTRLTR1562438450524384660-

< 1 2 3 4 5 > Total 5


Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2495

Start:

7346965  

End:

7349459

Strand:

+

>scaffold_2_LTR_21

CGTGTTCTTCGTGTTCATCGTGCTTTTCACCGTGTTTTTCATCTTTTTAGGCTGTTAGATCTTTAGTTGTTTTGTTCCTTAGTGTTATCGCTGTAGTTTGGTGGCCTTGAAACCACGTGTATCGTTTTGGGTCACACGGTTTCGTACCGTTTGTCCTCTAGCGTTTTTGTTTTGGTCTTAGGTTGCTTTTTGTTGCTTTTTGACCGTTCTCTCTCCAATCATGAGCTGTCACCTTTGTTGAAATTGATTCCATCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

231

Start:

7349455  

End:

7349685

Strand:

+

>scaffold_2_LTR_22

AAAGAAGATCCGGAGTTTGGGGAGAGTTATAGGGATCACGGCAAAGGAATTCACTCACGGTTCTACATCCAAGACGGGTTTCTCTTTCGGGACAAAAGGCTTTGCATACCCGCCAGATCTATTAGGACCCTACTAATGCAAGAGTCACATGGAGGAGGCCTAACCGGGCATTTTGGGGTTACTAAGACTTTGGAAGTCTTAAAGGAACATTTCTATTGGCCTAAGAAGAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

655

Start:

7349686  

End:

7350340

Strand:

+

>scaffold_2_LTR_23

TTTGGCCTCTCCAACGCCCCATCCACCTTTATGCGGTTAATGAATCACATCCTTAGACCTTTCATTAATAAGTTTGTTGTGGTCTATTTTGATGATATTTTAATCTATAGCCGTAGCCTAGAGGATCACTTGGTCCATCTAGAGATGGTGTTGGTCACACTTCGAGAAGAAAAGCTATACGCTAACTTCAAGAAGTGTGTCTTTGGTACTAATGAACTAGTTTTTCTAGGTTTTGTTGTGAGTGAGCAGGGCCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

299

Start:

7350332  

End:

7350630

Strand:

+

>scaffold_2_LTR_24

GATGTTTTGACTATAGATTGTGAAGGCAAGGACATTCCGGAGGAGATTAAGGCCATCATCAAGCGTTTTCAAGATGTGTTTCCGGAAGAACTACCGCATGGCTTGCCACCTATCCGAGGGATTGAACATCAAATAGATCTTATTCCGGGAGCTCAATTGCCAAATAGACCCGCCTATAGAGTCAACCCAACCGAAGCTAAAGAACTAGAGAAGCAAGTGGGAGACCTCATGAAGCAAGGATATGTCCGAGAGAGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2105

Start:

7350626  

End:

7352730

Strand:

+

>scaffold_2_LTR_25

AAAGAAGATCCGGAGTTTGGGGAGAGTTATAGGGATCACGGCAAAGGAATTCACTCACGGTTCTACATCCAAGACGGGTTTCTCTTTCGGGACAAAAGGCTTTGCATACCCGCCAGATCTATTAGGACCCTACTAATGCAAGAGTCACATGGAGGAGGCCTAACCGGGCATTTTGGGGTTACTAAGACTTTGGAAGTCTTAAAGGAACATTTCTATTGGCCTAAGAAGAAGCGGATGGTCGAGAAGTTCGTAGGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

455

Start:

8219607  

End:

8220061

Strand:

-

>scaffold_2_LTR_26

CCCCCTTTAAGCTGGCACAAAAATGTTTGAAATGCCCAGCTTACTCATATTAGCTCTGAACTGGCCATGATATAATGGTTTAGTGAGTATATCTGCAACCTGGCATTCTGATCTCACATGAAGAACGTTAAGAGTACCCTCTGTAACTCTGTCTCTTACTGTGTGCATATCTCTTTCAATATGCTTTGCTCTTCCATGGAAAACCGGATTGTTTCCAATATGAATGGCTGCCTGATTATCACAATATAGAACTGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

966

Start:

8255826  

End:

8256791

Strand:

+

>scaffold_2_LTR_27

AAAGTAATCTTCCTCAGATCTATAATTTGGAACAAGAGATTAACTCATTGCGCCAGGACAATTTGACTCTCTTTGAATACTACACTAAGAAGATTACTCTCTGGGTACGACTAGCATGTACTAAGAATCTGATGGAAAATGGTGGATGTCGTTGCTCTCGGGTCTTGAAGATCTTGGATGATCATGAGACCACACGTATCACTCAATTTCTCATGGGATTGAATGATGACTTTGCTAATATCAGAGGACATATCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

303

Start:

10604953  

End:

10605255

Strand:

-

>scaffold_2_LTR_28

CTCAGATTGACCATCTGTCTGAGGATGATATGCTGTACTCAAATGCACCTTGGTCCCCAAAGCTTTCTCAAATGCTTTCCAAAACAACGATGTGAACTTCGAATCTCTGTCAGAAACAATGCTTACTGGAACTCCATGACGTTTCACTATCTCATCCATGTACTTCTGAGCTAAGCGATCAGCCGTGTCCTTTTTATTGACTACAAGAAAATGAGCTGACTTAGTAAGTCGATCTACGTACAATTACCCAAATTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

101

Start:

12983096  

End:

12983196

Strand:

+

>scaffold_2_LTR_29

GAACATTATGAATTTCTAGTCATGCCATTTGAACTCATTAATACTACATTCACCTTTCAAAATGTGATGAATGGCTTTATTAACCCTTACCTCAAAAAGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

3548

Start:

5410325  

End:

5413872

Strand:

+

>scaffold_3_LTR_30

TGGTATTAGAGCATTAAATTTCTCTCTCATTCAAAAGTTTGTTACAAACACAAATTTTCTGGGAAAACGAAATTTTCCGGGAAAAATTTTCTGGATTCTCTTGAAGATTTCACTTCGGCTTGTCGTGTTCATCTTTCTCATCGTCGATCATCGTATCAATGGCGAAGAAAGGGACCAAGCAGCTCAGGAATCGTTCAGTTAGTCAGGATTCAGATGTTGATACTCCGATCGTTCAACGATCAGCTCCAGCTCGCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

5815

Start:

5413927  

End:

5419741

Strand:

+

>scaffold_3_LTR_31

AAGGCCCTGTCCGTACCGATCGCCGACCGTACCATCGTCCCGAAGGCTATTTCCGTGACCGTGTTCTTCGTGTTCATCGTGCTTTTCACCGTGTTTTTCATCTTTTTAGGCTGTTAGATCTTTAGTTGTTTTGTTCCTTAGTGTTATCGCTGTAGTTTGGTGGCCTTGAAACCACGTGTATCGTTTTGGGTCATACGGTTTCGTACCGTTTGTCCTCTAGCGTTTTTGTTTTGGTCTTAGGTTGCTTTTTGTTGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2122

Start:

5419796  

End:

5421917

Strand:

+

>scaffold_3_LTR_32

AAGGCCCTGTCCGTACCGATCGCCGACCGTACCATCGTCCCGAAGGCTATTTCCGTGACCGTGTGACGCATCACACATGATGTTCTTATATCTAGACATGTTATTTTCCATGAGGACTTGTTTCCTCTAGCGATTGGAGATATGAAACAACAAATTCAGGATTTGTTTCCTACTGTGTCTGATATTGATGATGTTTTAGCAGTGGATAAAGATTCTGCTAGCACTTCACAGACACAAGAAGATTCAGTGCCAGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

142

Start:

17445064  

End:

17445205

Strand:

-

>scaffold_3_LTR_33

CCATCCGTTTAAGGATGATAAGCCGTACTCAGATGCACATTAATGCCCATCTCTGCCTGGAACGCCCTCTAGAACGCTAAGTGAACTTAGGATCCCGGTCTGACACTATACTCACCGGTACTCCATGACGTCTCACTACCTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

107

Start:

18375339  

End:

18375445

Strand:

+

>scaffold_3_LTR_34

TAGTACTTCCTGATTTCGATAACACTTTTGAAGTTGAATGTGATGCTTCAGGTCTCGGCATTGGAGCGGTGCTTACTCAAAGAGGAATACTCGTCGCCTACTTTAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

88

Start:

20327312  

End:

20327399

Strand:

-

>scaffold_3_LTR_35

TCATGGTAAGCATAAGTCATTGCCTCGTTAAAACCTCTACTCGGAAAACCCATTGGGACAAAACCGAGTATAGGAAAAAGAGTACAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1739

Start:

24360856  

End:

24362594

Strand:

-

>scaffold_3_LTR_36

GACCGAACGAAGTAACGACACACGAGGGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGGCTCTAAGGAGCTCTCAATGTTTTCGCAACAAATGAGAAAAGGAAAGGACTGATTTTTATTTCAAAAGAAGCTAACCCTTACAAGTGACTTAGAGGGCCTTTATATAGGCGTTTACAAGGGAGACTCATAAAACCCTAAAGCAAACAGTCAAAGCGCGGGTCAACAAGGATAGAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1415

Start:

24362582  

End:

24363996

Strand:

-

>scaffold_3_LTR_37

ACAAACTTCTTAATGAAAGGTCTAAGGATGTGATTCATTAACCGCATAAAGGTGGATGGGGCGTTGGAGAGGCCAAATGGCATGACTAGCCATTCGTAGAGTCCTTGCTTGGTCTTGAAAGCCGTTTTCCATTCATCACCCTCTTTCATTCGGACTTGGTGGTAACCACTCTTGAGGTCAATCTTGGTGAAAATAATGGCTCCATCCAACTCATCTAGCATATCGTCAAGCCTTGGGATTGGATGTCTATACTTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

876

Start:

24365825  

End:

24366700

Strand:

-

>scaffold_3_LTR_38

AGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAGACTCCAAAGAGATGATTTGCAAGGGTGGGTAGCGACAACCGGTGAGTAACTCGAACCGGTGGTGACTTGGAGAAGAGGGGTGTGAAGGCGGAACGAAGTAACGACACACGAGGGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGGCTCTAAGGAGCTCTCAATGTTTTCGCAACAAATGAGAAAAGGAAAGGACTGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4308

Start:

24378616  

End:

24382923

Strand:

-

>scaffold_3_LTR_39

AATGGTGGATAGCGACAACCGGTGAGTATCTCGAACCGGTGGTGACTTGGAGAAGAGGGGTGTGAAGGCGGAGCGAGGTAACGACACACGAGGGATGGTGGGCTCGTGATACGGTTACACTTAGAGGCTTTGAATCCGATTCAAAGACCCTAAGGAGCTCTCAATGTTTTCACAACAAATGAGAAAAGGAAAGGACTGATTTTTATTTCAAAAGAAGCTAACCATTACAAGTGACTTAGAGAGCCTTTATATAGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

156

Start:

24384505  

End:

24384660

Strand:

-

>scaffold_3_LTR_40

AAATGAAACAACAGTAAACAACACAAAGAGTACTAAGAAGGATAGATACAACCTTAGGAACGTTCGGCTCTGATACCAAAAACTGATGCGTCACACGGTCACGGAAATAGCCTTCGGGACGATGGTACGGTCGGCGATCGGTACGGACAGGGCCTT