ID Class Order Superfamily Length Start End Strand View
scaffold_4_LINE_41 RetrotransposonsLINELINE991226497312265071-
scaffold_4_LINE_42 RetrotransposonsLINELINE3471226937512269721+
scaffold_4_LINE_43 RetrotransposonsLINELINE3191282678612827104-
scaffold_4_LINE_44 RetrotransposonsLINELINE2211416105914161279+
scaffold_4_LINE_45 RetrotransposonsLINELINE1741482500614825179+
scaffold_4_LINE_46 RetrotransposonsLINELINE1141607712316077236+
scaffold_4_LINE_47 RetrotransposonsLINELINE11932080475520805947+
scaffold_5_LINE_48 RetrotransposonsLINELINE108214695271470608+
scaffold_5_LINE_49 RetrotransposonsLINELINE33723434762343812+
scaffold_5_LINE_50 RetrotransposonsLINELINE17344037324403904-
scaffold_5_LINE_51 RetrotransposonsLINELINE12350980635098185-
scaffold_5_LINE_52 RetrotransposonsLINELINE17698446039844778+
scaffold_5_LINE_53 RetrotransposonsLINELINE34298450329845373+
scaffold_5_LINE_54 RetrotransposonsLINELINE1531242947112429623+
scaffold_5_LINE_55 RetrotransposonsLINELINE3601314589213146251-
scaffold_5_LINE_56 RetrotransposonsLINELINE2071314704613147252-
scaffold_5_LINE_57 RetrotransposonsLINELINE3291323938013239708+
scaffold_5_LINE_58 RetrotransposonsLINELINE1001539762815397727-
scaffold_5_LINE_59 RetrotransposonsLINELINE3521806064218060993+
scaffold_6_LINE_60 RetrotransposonsLINELINE15660406426040797+

< 1 2 3 4 5 > Total 5


Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_41

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

99

Start:

12264973  

End:

12265071

Strand:

-

>scaffold_4_LINE_41

TTTTCTAGTTAAAGATTAAGTTTTATATCATTTTTGAAATTTTTGACAAAAATTATATGGAATAAAAAGAAAGGAGAAAAACAGAAAACTACAAAACAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_42

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

347

Start:

12269375  

End:

12269721

Strand:

+

>scaffold_4_LINE_42

CATTTTTGCATTAGTCTTCGGAGAAGTTGTAGACGGTCTTTTTTTGGAGGTTTTGAGGACGTGCCATTAGAAGAAAGGTTTGTATGTGGCAACGACGACGAGGTTTTGAGTTTTTTGGAGAATTGAGGCAATTACGCAAATGTTCGAGCTTTGCGGTTCGGAATCGGTGTTTCCTCTTCAGGCCTCTGCCGTTTGTTTCGCTTTGTTTTTTTATCGTGTTTTATCTTGTATTCGTAGTTCTTTTAGTCGTAGTTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_43

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

319

Start:

12826786  

End:

12827104

Strand:

-

>scaffold_4_LINE_43

TTTTTTTTTTTGGTAACATGTTACGTATTTATACCATTTTTATATTTGCGACAGCGATTAGATTACAGAAGAAACTCATAAGACATAAAGACCAAAAACTAGAACTTAAAACTACAATTACAACAGAAACACGACAAGGAAAACACAAGTGAAAAACATCCAGCAGAGGCCCGAAAAAGAAACACTGATTCCAAACCACGAATCTTGGACATTTGCGTGATTACCTCAGCTCCAAAGAACTCAGGTCCTCATCGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_44

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

221

Start:

14161059  

End:

14161279

Strand:

+

>scaffold_4_LINE_44

GGTAATCACACAAATGTCTGAGTTTCGCGGTTCGGAATCATTGTTTCTTCTCGGGATTCTACTAATTGGGTTTCTCTTGTGGTTTCTTAGTTGTATTTTTGTTTATAGATTGTCAATTCTTTTCTTTGCCTTTCGGTCTTTCCACTCTTACTATATCTATGTATTTTCTATCAAAATTTTCGAAAATGGTATAAATACTTACATTGATACCAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_45

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

174

Start:

14825006  

End:

14825179

Strand:

+

>scaffold_4_LINE_45

GTTTTTGTGTTAGTTTTCGAAAAAGCGGTAATTAAACGCCTTTTCCTGAGGTTTGAGACCTGTTTTAGGATAAGAATTGCTCATGGCAACGACGATGAGGATTCGAGTTCTTTGGATCTGAGGCAATCACGCAAATATTCGAGATTCGCAATTCAAAATCGAAGTTTCTTTTTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_46

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

114

Start:

16077123  

End:

16077236

Strand:

+

>scaffold_4_LINE_46

AAAACCGATTCTTAGATCCGCCTCTCCGGTGGTCGGTGCTTCTCACCGGCACCGCGAGAGGGCTCTTATTGTTGTTCCTTTGCTTTGTTCTTAGTCTTGTTGGTGTTTCCTTTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_47

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

1193

Start:

20804755  

End:

20805947

Strand:

+

>scaffold_4_LINE_47

ACGCGCGGCGATTTATCAAAGAGAACGACGCTACAGTAACCAAACCTAGATCTCGATCTCTGCCTCTCCGGTCACGGTGCTCCTCACCGGTGGCCGGAGAGGGCTTCTCTCTCTTTCCCCTTCCTCTCTGTTATCTCCTCCGCCTCCCCTTTGAAGTTTCGGTGGTGTCCAAATTCAGCTTGCTCTTCGTCTCTTGTTGGTGGTAAAGCGGCGAGTGGCCACGCACGGAGCAAAGGACGTGCGGCGTGTCTCTCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_48

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

1082

Start:

1469527  

End:

1470608

Strand:

+

>scaffold_5_LINE_48

CTTTGTTGCTCCGGTGTTGTCCCGTCCATAGCTGGATTTTCGTCTCTTGTTGGTGGTGAAGCTGCGAGAGGTCTCGCTTGTCGCACAGTGCAAGGGACAGTTGCATGTTTCTCCCGGTGAGCTCTTGAACACTTGAGGACGGTGTTGTTTCAGGTTTTTCTCCGATGAGTTTGGCTTCAACTCTGTCCTCGTGCGGCGGGACCATTCTCTCGATCTGAGAAACCGGTGGTGCATCGCCGTGTTTTTCAGATATCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_49

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

337

Start:

2343476  

End:

2343812

Strand:

+

>scaffold_5_LINE_49

GTTTTTGTGTTAGTCTTCAGAGAAGATGTAGACGCCCTATCTTGAGGTTTGAGGATGGGTCTAATAAGGTTGGGATTGCTCGTGACAACAACGATGAGGATTCAAGTTTTTTGGAGCTGAAGAAATCACCGAGCTTTGCGGTTTGGAATCGGTGTTTTTTACTGGGACTCTACTCGTTGGGTTTTCGCTTGTGCTTCCTTGTTGTTTTTGTTGTGTTGTGTTGTAGTTTTGTTTTTTTCTTTAGCTTTCGGTCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_50

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

173

Start:

4403732  

End:

4403904

Strand:

-

>scaffold_5_LINE_50

GAAGAAGAAACACCAATTCAAAACCGCGAACCTCATACATTTGTGTGATTGCAATAGCTCCAAAGAAATCGAGTAAGCATCGACATTGCCACGAGCGAACCCGACCCGAGGTCAGTCTTCAGACCTCAAAACAAACTGGTGCGTATAGCTTCTTCGAGGACTAACGCCAAAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_51

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

123

Start:

5098063  

End:

5098185

Strand:

-

>scaffold_5_LINE_51

TTTTTTTTTTTTTGATAAAAGATGAAATTTTATACCATTTTAATTTTTGACAGAATTACAGAGAAAACTTGAAACAAATTAAAGCAATCTACAGAGATATAAAAAACAACATTACAACTCAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_52

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

176

Start:

9844603  

End:

9844778

Strand:

+

>scaffold_5_LINE_52

TTCCGTTTTTGCGTTAGTTCTCGGAGAAGCTGTAAGTGGGCCTTTGTTCTGAGGTTTAAGGACTGCTTCGGATAGGGTCTGCTCGTGGTAACAACGATGAGAACTCGAGTTCTTTTGAACTGAGGCAATCGCGCAAATGTCCAAGCTTCGCGGTTTGGAATCGGTGTTTCTTCCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_53

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

342

Start:

9845032  

End:

9845373

Strand:

+

>scaffold_5_LINE_53

TTCCGTTTTTGCGTTAGTTCTCGGAGAAGCTGTAAGTGGCCCTTTGTTCTGAGGTTTGAGGACTGCTTCGGATAGGGTCTGCTCGTGGCAACAACTATGAGAACTCGATTTCTTTTGAACTGAGGCAATCGCGCAAATGTCCAAGCTTCTCGGTTTGGAATCGGTGTTTCTTCCTTGGGCCTCCGCTGATGGTTTTCGCTTGTGTTTTCCTTGTTGTGTTTTATGTTTTATTTTATTTTTCATTGTAGTTTTCGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_54

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

153

Start:

12429471  

End:

12429623

Strand:

+

>scaffold_5_LINE_54

GAGAAGCTGTAAGCGTCCTTATGAGTTGAGGTTTGAGGGCTTGTCTTGATTGGCTATACTCGTGCCAACAACGATGAGGGTTCAAATTATTTGGAGTTGAAGCAATCACATAAATATCCGAGTTTCGCACTTCAGAATTGGTGTTCTTTCCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_55

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

360

Start:

13145892  

End:

13146251

Strand:

-

>scaffold_5_LINE_55

TTTTTTTTTTTTTAGTAAAATGTGAAGATTTTATACCATTTTCGAAGTTTCGACAGAAATTACAAAGAATACAAGTAGCGGAAAAAACAAAATCTACAGAATAAACAATAAAAAACAAAACAACAAAGAAGGCGAGCGTAAGACCAGAGCAGAAGCGAAAGAAGAAACACCGATTCCGAGTAGCCAAACTCAGAAATTTGCGTGATTTCCACAACTCGAAGGAGCTGGAGTCCCATCTTAGTTGCCACGAGCAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_56

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

207

Start:

13147046  

End:

13147252

Strand:

-

>scaffold_5_LINE_56

TCCTTGCCACCGTGCGAAGGAACCCACTGCGAACCACCAACTAGAGACGAAGGGACAGATCGGAATCTGAAGCTTAACGACGGAGCAAGGGAGGAGGAGAAGTAACAGAGACAAGAAAGGTGGAGGAGGAAGAGCCCTCCCCGTTCGCCGGCAAGGAGAGCCGCAAACGGAGAGGCGGAGGAGGCAGATCTAGGGTTGTGTTTTTGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_57

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

329

Start:

13239380  

End:

13239708

Strand:

+

>scaffold_5_LINE_57

GCGTTAGTTTGCGGAGAAGCTGCAGGCGCCTTATCCGGAGGTTTTGAGGACTGGCCTCTGCTAGGGTCTGCTCGTGGCAACTAGGATGGGACTCCGCCTCCTTGGTTCCTTGGAGTTGTGGAAATCACGCAAATTTCCGAGTTTGGCATCTCGGAATCGGTGTTTCTTCTCTAATTTCCGCTCTACGTTTTCGTTTTTCTCCATTGTTGTTTTGTATTGTCTGCAAATTCTGTAGTTTTTGGTTTTTTCTGCTAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_58

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

100

Start:

15397628  

End:

15397727

Strand:

-

>scaffold_5_LINE_58

TTTTTTTTTTTTGTAACAATGTTAAGTATTTATACCAATTTCAGTTTTACGACAGCGATTACAGAGAAAACGAATAACACATAACAACCAAAAATTACAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LINE_59

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

352

Start:

18060642  

End:

18060993

Strand:

+

>scaffold_5_LINE_59

GAGGTTCTCGGATGATTACTGTATTTGCGTTAGTTCTCGGAGAAGCTGTAGGCTACTATCTCGAGGTTTTAAGGACGGGCCTCGGGTAGTTCGGCTCGTGGCAACAACGATGAGGATTCCAATACTTCGGTATTGTGGCAATCACGCAAATTTCCGAGTTTCGCGGACTCGGAATCGGTATTTTTTCTCGCGACTTGGCCATAATTTCTCAACAGCGATCCCAAGCTTTTTGAGTAGTAATGTTGTTTTTTATTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_6_LINE_60

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

156

Start:

6040642  

End:

6040797

Strand:

+

>scaffold_6_LINE_60

CGTTTTTGTGTTAGTATTCAGAAAAGCTGTAAGCGTTCCTTCATTTAAAGACTGCTTCAGATAGAGTGCTCGTATCAACAATAATGAGGGCTCGAATTCTTTTGAGCTGAGACAAGCACACAAATGTCCAAGTTTCGCGGTTTGAAATCGGTGTTT