ID Class Order Superfamily Length Start End Strand View
scaffold_3_LINE_21 RetrotransposonsLINELINE18053974755397654-
scaffold_3_LINE_22 RetrotransposonsLINELINE18987537398753927-
scaffold_3_LINE_23 RetrotransposonsLINELINE3351107918011079514+
scaffold_3_LINE_24 RetrotransposonsLINELINE2691222895512229223+
scaffold_3_LINE_25 RetrotransposonsLINELINE3681283141812831785+
scaffold_3_LINE_26 RetrotransposonsLINELINE1031313214613132248-
scaffold_3_LINE_27 RetrotransposonsLINELINE991913837919138477-
scaffold_3_LINE_28 RetrotransposonsLINELINE1741928072919280902+
scaffold_3_LINE_29 RetrotransposonsLINELINE9081928102319281930+
scaffold_3_LINE_30 RetrotransposonsLINELINE3471952811719528463+
scaffold_3_LINE_31 RetrotransposonsLINELINE2232108944721089669-
scaffold_3_LINE_32 RetrotransposonsLINELINE1182110184921101966+
scaffold_3_LINE_33 RetrotransposonsLINELINE1502217690122177050+
scaffold_3_LINE_34 RetrotransposonsLINELINE1882327059723270784+
scaffold_3_LINE_35 RetrotransposonsLINELINE9532327269423273646+
scaffold_4_LINE_36 RetrotransposonsLINELINE24019770301977269+
scaffold_4_LINE_37 RetrotransposonsLINELINE92427861022787025+
scaffold_4_LINE_38 RetrotransposonsLINELINE34236457253646066+
scaffold_4_LINE_39 RetrotransposonsLINELINE22740186144018840-
scaffold_4_LINE_40 RetrotransposonsLINELINE78060473406048119+

< 1 2 3 4 5 > Total 5


Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_21

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

180

Start:

5397475  

End:

5397654

Strand:

-

>scaffold_3_LINE_21

GCCCCTTGCACCGTGCGAAAGCGAGACCTCTCCCAGTTCACCACCAACAAGAGACGAAAACCCAGCCATGGACAGAACACCACAGGAGCGACAAAGGCAGCACGGAGAAGACAACCAGAGAAAAGGGGAAGAGGGAGTGGCCCTCTCCGGAAACCGGTGAGGAGCACCGTCGCCGGAGAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_22

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

189

Start:

8753739  

End:

8753927

Strand:

-

>scaffold_3_LINE_22

CGAGAAAAAACACCAATTCCGAACTGAGAAGCTCGGACATTCGTGTGATTGCTTCAGCTCCTAAAAACTCGAGTTCTCATCATCGTTGCCACGAGCAACCTCTTCCTTAGGCAAGCCCTCAAACCTCACAAAAGATCACCTACAGCTTCTCCGAGGGACACACACAAAAACGGGAAGGCTAAAGAGGAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_23

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

335

Start:

11079180  

End:

11079514

Strand:

+

>scaffold_3_LINE_23

TTCCGTTTTTGCGTTAGTTCTCGGAGAAGCTGTAAGTGGCCCTTTGTTCTGAGGTTTGAGGACTGCTTCAGATAGGGTCTGCTCGTGGCAACAACGATGAGAACTCGAGTTTTTTTGAACTGAGGCAATCGCGCAATTGTCCAAGCTTCGCGGTTTGGAATCGGTGTTTCTTCCTTGGGCCTCCGCTGATGGTTTTCGCTTGTGTTTTCCTTGTTGTGTTTTATTTTATTTTTCATTGTAGTTTTCGATCTTTCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_24

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

269

Start:

12228955  

End:

12229223

Strand:

+

>scaffold_3_LINE_24

TCGAGGTTTGAGGACTGCTTCGGATAGGGTCTGCTCGTGGCAGCAACGATGAGAACTCGAGTTCTTTTGAACTGAGGCAATCGCGCAAATGTCCAAGCTTCGTGGTTTGGAATCGGTGTTTCTTCCTTGGACCTCCGCTGATGGTTTTCGTTTGTGTTTTCCTTGTTGTGCTTTATGTTTTATTTTATTTTTCATTGTAGTTTTCGGTCTTTCTGTCTTCCTTGTTTTCTCTGTAATCTCTGTCACAAATCTAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_25

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

368

Start:

12831418  

End:

12831785

Strand:

+

>scaffold_3_LINE_25

CGGGTTTGTGAATTAGTCTACTGTTGTCATTGCGTTTTTGCGTTAGTTTGCGGAGAAGCTGCAGGCGCCTTATCCGGAGGTTTTGAGGACTGGTCTCTGCTAGGGTCTGCTCGTGGCAACTAGGATGGGACTCCGGCTCCTTGGTTTCTTGGAGTTGTGGAAATCACGCAAATTTCCGAGTTTGGCATCTCGGAATCGGTGTTTCTTCTCTAATTTCCGCTCTACGTTTTCGTTTTTCTCCATTGTTGTTTTGTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_26

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

103

Start:

13132146  

End:

13132248

Strand:

-

>scaffold_3_LINE_26

TTTTTTTTTTAATTCTAAAATTTGAAGATTTTATACCATTTTCGAAATTTGTGACAGAAGCTATAATGAATACAAGTAGCGAAAAAAAACAAAAACTACAGAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_27

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

99

Start:

19138379  

End:

19138477

Strand:

-

>scaffold_3_LINE_27

TTTTCTAGTTAAAGATTAAGTTTTATATCATTTTTGAAATTTTTGACAAAAGTTATATGGAATAAAAAGAAAGGAGAAAAACAGAAAACTACAAAACAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_28

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

174

Start:

19280729  

End:

19280902

Strand:

+

>scaffold_3_LINE_28

TGTCTCTCCGGCAACGGTGCTCGTTGCTGGTTGTCAGAGAGGACCTCTCTCTTCCCCCTCTCTCTGTCTATTTGTCTCTTCCTCCGTCTTGCCTTTGAAGCTCTTGCGGTGGCCAATCCGAGGTTTGTTCTTCGTCTCTTGTTGGTGGTGAAGCGGCGAGTGTCCACGCACGAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_29

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

908

Start:

19281023  

End:

19281930

Strand:

+

>scaffold_3_LINE_29

TCTCCGTTTCTGGTTGTGGCTTTGATGTGGCGATTGTAGCATGAGTGCGGCTCCTAACGGCGGGATTATCCTCCATAACTGAGAAACCGGTGGTGCATCGCCGAGCTTCTTCAGTAGTCGTCGTTCCTCTTGTGGTATTGGCTATTCAGCGAGCTTCGGTGAGGCGGACCTTCTCTTCTCGGTCTCTCTGACCTTAGTGGATCCGGCGGGTATCTCTATTGGAGGCAAGCCTCGGAGTCATTCTTGGCTTTTTGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_30

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

347

Start:

19528117  

End:

19528463

Strand:

+

>scaffold_3_LINE_30

TTCCGTGTTTGCGTTAGTCCTCGGAGAAGCTGTAGGCGGTCTTTTCTTGGAGGTTTTGAGGATGTGCCTCTAGAAGAAAGGTTTGCTCGTGGTAACGACGATGAGGATTCGAGTTCTTTGGAGCTGAGACAATCACGCAAATATCCGAGCTTTGCGGTTCAAAATCGGTGTTTCCTCTTCATAACTCGGCCGTTTGTTTCACTTTGTTTTCTTATCGTGATTTCTCTTGTATTCGTAGTTCTTTTAGTCGTAGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_31

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

223

Start:

21089447  

End:

21089669

Strand:

-

>scaffold_3_LINE_31

TTTTTTTTTGGTAAAATGTTAAGTATTTATACTATTTTTACAAATTTTGACAGAAATTACAAAGAATACAGGAAAGATCGAAAGGTATAGAAACCACCAAAAAGTACAACACAACACAAGTAGAAAAGGGGAAGAAAACACAAACGAAAACCCCACAAATAGAGACTTGAAAAGAAACACCGATTCCGAACCACAAAGATCGGAAATTTGCGTGATTTCCTCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_32

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

118

Start:

21101849  

End:

21101966

Strand:

+

>scaffold_3_LINE_32

TAGTAGTGGAGTTTTTGCTTTGCTTTCTAGTTGTTAATTGCTACTTGTATTCCTCTCTAACTTCGGTCAAAAATTTGCGAAAATGGTATAATTCTTCACATTATTACCAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_33

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

150

Start:

22176901  

End:

22177050

Strand:

+

>scaffold_3_LINE_33

GTTTTTGCGTTAATTATCAGAGAAACTATAGACGATTTTTTTTTGGAAGTTCGGAAAACATGCCTCAGAAAATGTTTGCTTGTGGCAATGACGAGGAGAATTCAAATTCTTTAGAGCTGAAGCAATCTCGTAAATGTCCGAGTTTCGCGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_34

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

188

Start:

23270597  

End:

23270784

Strand:

+

>scaffold_3_LINE_34

AAACTAAAATCAAAATTTTGATTTGCCCTCTCCGGCTACGGTGCTCCTCACCGGTTGCCAGAGAAGGGCACTCTCTCTTCTCCTTTTCTCTAGTTGTCTTCTCCGTGCTGCCTTTGTCGCTCTGGTGGTGCTCTGTCCATGGCTGGATTTTTGTCTCTTGATGGTGGTGAAGCGGCGAGAGGTCTCGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_35

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

953

Start:

23272694  

End:

23273646

Strand:

+

>scaffold_3_LINE_35

CGTGCAGCGTGATTCTTGTCGGTTCTGGTGTTGGCTCAGGTGAGGCTTATGTTCAGTGGTTTAGCTCCTCGCGGCGGGCCCATTCTCCCGATCTGAGAAACCGGTGGTGCATTACCGTGTTCTTCAGTCATCGCTGTTGTTCCTTTTGTGGTTTGGGCTCACCAGTTTGTCTTGGCGAGACGGTTCTTCTCTTCTCGGTCTCTCTATCTTTTTTTTCTCCAGCACCAGCAGTGTCATCTCTGGATAAGGCGAGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_36

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

240

Start:

1977030  

End:

1977269

Strand:

+

>scaffold_4_LINE_36

GCTCGTGGCAACTATGATGGGACTCCAGCTCCTTAGAGTTGTCAAAATCACGCATCTTTGTGAGTTTGGTTTCTCAGAATTAGTGTTTCTTCTTTCGTTTCCGCTCTGAACATACGTTATCCTCTTTTGTTGTTCTGTTATTGTCTGTTTTTCTGTAGAATTTTTTTTTTTTTTCTGCTTCTTTGTAATTTCTAATGGAAAAATAGTATAAATATTTCACATTTTACCAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_37

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

924

Start:

2786102  

End:

2787025

Strand:

+

>scaffold_4_LINE_37

GCTTCGGTGAAGCGTTTGTAGCTGCGGTGTTGTTCCTAGCGGCGGGATATTTCTTCAGATCTGAGATTCCGGTGGTGCATCGCCGTGTTTCTCCACATGTCGCCGTGTTCCTCTTGTGGCATGGACTCTTCGACGAGCCTTTGGTGTGACGGTTCCTCTCTTCTCGGTCTCTCTACCTTATTTTTTGTCCAGCTCCGGTGGTGATGTGTTAGGATCCGACGGGCGTCTCTTTTGGAGGTAAACCTCGGGGTCTTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_38

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

342

Start:

3645725  

End:

3646066

Strand:

+

>scaffold_4_LINE_38

GTCCGGTGTTGTCATCGCGTTTTTGCTTTAGTTTGCGGAGACGCTGTATGCGCTTTCTCCGGAGGTTTTGAGGACAAGCCTCTGTTAGGGTTTATTCATGGCAACTAGGATGGGATTCTAGCTCCTTGGAGTTGTGGAAATCACGCAAATTTCCGAGTCTGGTTTCTCGAAATCGGTGTTTCTTCTTTCGGTGTTTCTTCTTTCGTGGACATTCGTTCTCCTTCTTTATTGTTTTGTTATTGTCAGTTTTTTGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_39

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

227

Start:

4018614  

End:

4018840

Strand:

-

>scaffold_4_LINE_39

TTTTTTTTTTTTGATAAAATGTAAAGTATTTATATCTTTTTCAAAGTTTCGACAAAAATGAAAAAGAGTACATACAAGTAGCAGAAAAAACAAAAATCTACAGAAAAATAAGACAATAACAAAACAGGAAAGGAGAAAAACGTATGTCCAAAGTAGAAACAAAATAAGAAGCACCGATTTCGAGATGCCAAACTAAGAAATTTGGATGATTTCCACAACTCCAATGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LINE_40

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

780

Start:

6047340  

End:

6048119

Strand:

+

>scaffold_4_LINE_40

GGTGTGGCGATTCTTCTCTTTTTGGGTCTCTCCACCTTATTTTCTCCGCTCCGGAGGTGGTTGGTTTGGAATCTGTCAAGCGGCTCTTGTGGAGGCAAGTCACATAGTCGTTTGCTCTTGTGGTTTGTTCGTGGCGGTTAGTGGCGTTGTGGGTTTTGTTTCACGTGGTCAACGTCTCTCCTCCATTAGTGGGCAGTTTAGTGTGGCAGCCTCCTCGGCCATGGTTATGGCGTTTCCATGACCTTTTCGCTTGGC