ID:

AA_scaffold3337_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

273

Start:

242165  

End:

242437

Strand:

+

>AA_scaffold3337_LTR-Cassandra_41

GACTACCTATCTCACCAAAAGTGTATTTAGTTCTTCGGTCACACATCAAACTCCACAGTTGAGTGTGTTTGAGGGTAGTAACTTTAGAATAGATGACATATTAGGAAGTCATTTCTCGGTATTGTGTGAGTGAAAACAAAACACGTGTTAAACTCTTACAGTAGTGTTGTTTAGGATCAGTCATCAAATCTTTCAAACTTTTTGATGTAGCCCACCAACCATTAGACAGAATGGACCAAAAAAGTTGGGGCCATGACAGGGTTGGTCAAAGTG

ID:

AA_scaffold3676_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

21728  

End:

21837

Strand:

-

>AA_scaffold3676_LTR-Cassandra_42

GACCCATTGGGTCCACCTTTTCCTAATGGTTGGTGTGTTACTCCAAGAAATTTGAAAGATTTGATGATTGATTCTACAAATCACACGTGTTTTGTTCTCACTTACACGAT

ID:

AA_scaffold3904_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

121

Start:

104838  

End:

104958

Strand:

+

>AA_scaffold3904_LTR-Cassandra_43

ATCTATAGGATCAGTCGTCAAATCTTTCAAACTTCTAGAATATTGCACCGGCCATCGGACAGAATGGGCCCGATGGGTCGGGAGAGAGGCGGCCCTATGGCAGAGCGGTCGGGGCATTATA

ID:

AA_scaffold3904_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

128

Start:

227016  

End:

227143

Strand:

-

>AA_scaffold3904_LTR-Cassandra_44

CACCACGAGAGTTTACCATGTGTTTTGTCCTCACTCACACGATACTGAAAGCTGACTTCCTAAAACTATTACACCTCAAACATGTTTAACTATAGAAGTTAAGATGATGTGTGACCGAAAAACTAAGT

ID:

AA_scaffold3938_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

236

Start:

14235  

End:

14470

Strand:

+

>AA_scaffold3938_LTR-Cassandra_45

TGTAACATCCCGTGTTCAGGAATATAGTGAAAAAGGGAGATAGTGGTGCATGACGAAAAAAGCTTAAATGAATTGATTAAGCTACCTATATGATCAAAGTGCACTTACCTTTTCGGTCACATATACTGTCAGAACTCCACAGTTAAACGTCTTTTTTAAGATGAAGTAGTTTCAGGATGGATGACCTCCTAAGAAGTCATTTTTCAGAATCGTGTGAATGAGGACAAAAACACGGG

ID:

AA_scaffold4000_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

257

Start:

73922  

End:

74178

Strand:

-

>AA_scaffold4000_LTR-Cassandra_46

ACTGATCCTATAGATCACCACGAGGTTTAACACGTGTTTTGTCCTCGTTCACACGATACTGGAAAATAACTTCCTAGTAGGTCACCCATCCTAAACTTACTGCACTTCAAGCACACTTAACCACGGAGTTATGTTCTCCGTTCTGACAAGATGTGTGATCGAAAAACTAAGTACATTTTGGTGATATAGATAGTCTAATCAATTCTTTTGAACTTTCTCGTTATGCACCACAATCTTCTTGAACCCGGGATGTTACA

ID:

AA_scaffold4006_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

288

Start:

359214  

End:

359501

Strand:

+

>AA_scaffold4006_LTR-Cassandra_47

ACCTAAGTAGACTAAGTTTTTCGGTCACACATCATGTCAGAACTCTATAGTTAAAGGTATTAGAGGTCTAGACATTTTAGGATGAGTGATCTATTAGAAAGTCATTTTCCAATATCGTGTGAGTGAGACAAAACATGTGTTAAACTCTCGTGGCTTTCTGTACTCTGTAAGGGTAGTTGTCAATTTTTTTAAGCTTCTCGGAATAGCGTACCAACCATAGTAGATCCAATGGACCGTAAATGGGCCCGGGAAAGATGGGCTTATGGTAGAGACGGTCGGGGTGTTATA

ID:

AA_scaffold4006_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

306

Start:

494554  

End:

494859

Strand:

+

>AA_scaffold4006_LTR-Cassandra_48

TGTAACACACCGAGTCAAGAAAATGGTGCATAGCAAGAAAATTTAAAGAATTAATTAGGCTATCTATATCACCAAAATGCATTTAATTTTCCGGTCAGACATATTGTCAGAACTCTATAGTTAAACATGATTGAAGTGGAGGATGTGTGACCGGAAAATCATTTTCTAGTATCGTGTAACTGAGGACAAAACATGTGTTAAACTCATGTGGTCTGTAGGATTAGTCGTCAAGTCTTTCAAGTTTTTTGTAATAGCGAACCGCCCAGCGGACAAAGTGGGACCAGTAAGCCTTAAATGGACCTGGAG

ID:

AA_scaffold4027_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

8868  

End:

9223

Strand:

+

>AA_scaffold4027_LTR-Cassandra_49

GTAACACCCTCTGTTCAAAGATATAATGATGCATGGAAAAAAAACTTAAGAGAATTGATTAGACTACCTATATCACCAAAAGTGCACTTAGCTTTTCGGTCACACATCCTGTAAGAACTCCACGTATAAGTGTGATTAAGGTGGAAAAGTTTCAAGATGGGTGACCTACAAGAGAGTCATTTTCCAGTACTATATAAGTGAAGAAAACATGTGTTAAGCTCTCCTGTTGGTCTGTAGGGCCAATCATCAAATCTTTCAAGTTTCTCAAACTAGTGCACTGACTGTCACAAAAAATGGGCCAAATAGACCATAGATGGGTTGGGGGAGAAGTGAGCTCATGGTAGCGACGAACGGGG

ID:

AA_scaffold4027_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

371

Start:

9342  

End:

9712

Strand:

+

>AA_scaffold4027_LTR-Cassandra_50

TGTAACACCCCATATTCAAGGAGATAGTGGTATATGTAAAGAAATCTTAAGAGGATTGGTTAGATTACCTATATCACCAAAAATGCACTTAAATTTTGGGTCACATATCGTGTTAGAACTCTACAGTTAAGCATATTTAAGGTGGAAATTTTTTAGGATGGGTGACCTACTCGGCAGTCATTTTTGAGTATCGTGTGAGTCAAGATAATCACGTGTCAAACTCTTGTGGTGGTATGTAGAATCAGTCGTCAAATTGTTCAAGCCTTTCGGACTAACGCACCAACCGTCGGACAGAGTGAACGAAATATGCCATAGATTAGCCGAGAAAGAGAGAGAGGTGGGTCCATGGTGCGAGTGATTGGGGTGTTATA

ID:

AA_scaffold4027_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

9929  

End:

10255

Strand:

+

>AA_scaffold4027_LTR-Cassandra_51

GAAAGGTTATTAAAATTGATTAGGCTACTTATATCACAAAAAGTGCACTTAGTTTTTTGGTCACACCTCCTTTCAAAACTCTATAGCTAAGCATGTTTAAAGAGAAAAAGTTTCAGGATGGGGTGACTTATTGGGAAGTCATTTTCCAATATTGTGTGTATAAGAACAAACCACATGTTAAGCTCACGTGGTGCTTTGTAAGGTCAGTTGTTAAATCATTCAAAGTTCTTGGGACTAGTACACTAACATTCGGACAAGATGGGCTCAGTAAACGATAAATGGTCGAGAAAGAAGTGGACCCATTGCAGGGGTTGTATGGGCATTATA

ID:

AA_scaffold4032_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

140

Start:

110054  

End:

110193

Strand:

-

>AA_scaffold4032_LTR-Cassandra_52

CTAAGTGCATTTAACTAAGTGAACTTAACTAAGTGCACTTAACCATGGAGTTCTAAGTGCAGTTAGATGATAGATGTAGCCTAATCAATTCTGTAAACTTTCTTTCTGTGCATCACCATCTTCTTAAACTCAGAGTGTTA

ID:

AA_scaffold4248_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

141

Start:

31427  

End:

31567

Strand:

-

>AA_scaffold4248_LTR-Cassandra_53

TGAAATTAATGCATCTCAAGCACACTTAACTGTGGAGTTATGATCCAAAAAGCTAAGTGGAGTTATATGATTTAGGGAGTCTAATGGGTTCTTTTTAAGCTTCTTCATGCACCATTATTTTCATGAAACAGGGATGTTACA

ID:

AA_scaffold4398_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

137

Start:

132118  

End:

132254

Strand:

-

>AA_scaffold4398_LTR-Cassandra_54

CCAAAGCACATTACACAGAATTTTGATAGAACGTGTGACAAAAAAACTAAGTACGCTTAAATGTTATAAGCATTCTAATCAATTCTTTTAAGCTTTCTCGTGATGCATCACCATCTCTCTAAACATGTGGTGTTACA

ID:

AA_scaffold4710_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

131

Start:

14443  

End:

14573

Strand:

+

>AA_scaffold4710_LTR-Cassandra_55

AATACCTCGTGTTCAAGGAGATAGTTGTGCATGACGAGAAAGTTTAAAAGAATTGATTAGGCTAGCTATATCACTAAAGTGTACTTAGTTTTTCGGTCATAACTCCATAGTTAAGCATGCTTGAGCTGCAG

ID:

AA_scaffold4751_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

91

Start:

118757  

End:

118847

Strand:

+

>AA_scaffold4751_LTR-Cassandra_56

TGTAACACCTCGAATTAAAAAAGATGACAGTGCATTTGCACCATAGCTTAAAAGAATTGATTAGGTTAACTATATTACCATAATGTCTTTA

ID:

AA_scaffold4751_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

479847  

End:

479955

Strand:

+

>AA_scaffold4751_LTR-Cassandra_57

AACGGTATCAGAGCAAAATCTAGATGAGTGTGGAGTTCCAAAGAAGGCTCACACTATCGAGAGTAACGGTTTTGGGCACAACGATGATATTACGCTTAGTAAGTGGGTG

ID:

AA_scaffold487_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

266

Start:

190406  

End:

190671

Strand:

+

>AA_scaffold487_LTR-Cassandra_58

TGTAACACCCCAAGTTGAGGAAAATGATGGTGCATTGCAAGAAAACTTAAAAGAACTGATTTGACTATCTTTATCACTAAAGTGCATTTAGTTTTTCGGTCACACATCCTGTCAAAACTCCACTGTTAAGCGTGTTTGAAGTGTAGTAATTTCAAGATAGATGATCTATTGGGAAATTATCTTATGGTATCGTGTGAGTGAGGACAAAACACGTGTTAAGCTCTTGTGGTGATTTGTAGGAGAAGTCGTAAAATCTTTCAAGCTTC

ID:

AA_scaffold5167_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

172

Start:

314547  

End:

314718

Strand:

-

>AA_scaffold5167_LTR-Cassandra_59

AAGGTCCCATTCTACAATTAACTATACCTCAAGCACGTTTAATTATAGAGTCTTGATATGATGTGTGACCGAAAAACTAAGTGTACTTCGGTGATATAGATAGTCTAAACAATTTTTGTAAGTTTTCTCGCTATGTATCATCATCTCTCTGAACAGGAACAGGGGTGTTATA

ID:

AA_scaffold5167_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

122

Start:

369530  

End:

369651

Strand:

-

>AA_scaffold5167_LTR-Cassandra_60

TAGAATTCTAACATAATATGTGACCGAAAAGCTAAATGCATTTGGTGATATAGCTTAACCTAATCAATTTTTTAAAAGTTCTTTTCTCATGCATCCACTTTCTTCCTGAACTCAGTATTACA