TBGR-Browse-Aal-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr7_Retroposon-L1-dep_41	Other	Retroposon	Retroposon-L1-dep	268	5945118	5945385	+
Aa.chr7_Retroposon-L1-dep_42	Other	Retroposon	Retroposon-L1-dep	295	6917222	6917516	-
Aa.chr7_Retroposon-L1-dep_43	Other	Retroposon	Retroposon-L1-dep	241	7110196	7110436	-
Aa.chr7_Retroposon-L1-dep_44	Other	Retroposon	Retroposon-L1-dep	295	16522748	16523042	-
Aa.chr7_Retroposon-L1-dep_45	Other	Retroposon	Retroposon-L1-dep	295	25787648	25787942	-
Aa.chr8_Retroposon-L1-dep_46	Other	Retroposon	Retroposon-L1-dep	450	5541276	5541725	+
Aa.chr8_Retroposon-L1-dep_47	Other	Retroposon	Retroposon-L1-dep	264	8442076	8442339	-
Aa.chr8_Retroposon-L1-dep_48	Other	Retroposon	Retroposon-L1-dep	184	12755622	12755805	-
Aa.chr8_Retroposon-L1-dep_49	Other	Retroposon	Retroposon-L1-dep	175	12894329	12894503	+
Aa.chr8_Retroposon-L1-dep_50	Other	Retroposon	Retroposon-L1-dep	245	14550319	14550563	-
Aa.chr8_Retroposon-L1-dep_51	Other	Retroposon	Retroposon-L1-dep	367	15291032	15291398	+
Aa.chr8_Retroposon-L1-dep_52	Other	Retroposon	Retroposon-L1-dep	225	16278727	16278951	+
Aa.chr8_Retroposon-L1-dep_53	Other	Retroposon	Retroposon-L1-dep	87	16774573	16774659	-
Aa.chr8_Retroposon-L1-dep_54	Other	Retroposon	Retroposon-L1-dep	313	24315939	24316251	+
Aa.chr8_Retroposon-L1-dep_55	Other	Retroposon	Retroposon-L1-dep	269	24787489	24787757	+
Aa.chr8_Retroposon-L1-dep_56	Other	Retroposon	Retroposon-L1-dep	208	24791920	24792127	+
Aa.chr8_Retroposon-L1-dep_57	Other	Retroposon	Retroposon-L1-dep	122	30571444	30571565	+
Aa.chr8_Retroposon-L1-dep_58	Other	Retroposon	Retroposon-L1-dep	87	30819475	30819561	-
Aa.chr8_Retroposon-L1-dep_59	Other	Retroposon	Retroposon-L1-dep	426	38508365	38508790	+
scaff_39757_1_Retroposon-L1-dep_60	Other	Retroposon	Retroposon-L1-dep	396	2987	3382	+

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_41

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

268

Start:

5945118

End:

5945385

Strand:

+

>Aa.chr7_Retroposon-L1-dep_41

CGGTTATAGGTGGCTAGAGATGAATTAGGTCATTTGTTTGGGTTCGCCTTATGGTTAAAAGTTTGTTGTGGAGGCATCTACTTAGCTTTCGTTTGGCCTTTGGGTTATGGCGAGTTTCAAGACCAGCAGTGAGCTTGTTCTTCAACTCTTTTCTTTGCGTGAAGGTGACCTTCCTTTAGCGAATAGATGGCTAAGGTTGGTTTGCGAGGGTCCGTGTCAAGAGATGAAGATCCTATATGGCATTTTTCTTTGCATCGGTAAAAGTTTC

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_42

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

295

Start:

6917222

End:

6917516

Strand:

-

>Aa.chr7_Retroposon-L1-dep_42

GAAAGGGACAACGCCAAACAGGATCTACCACTCTTAACACGGACCCTCGCAAACCAACCAAAGCCATCTACACACTAAGGAAGGTCACCTTCACGCAAAGAGAAGAGTTGTAGAACAAACTCACTTCTGGTCTTGACAGCCTCTCCAAAACCGAAAGACTAAGAAGAAGGCCAAGAAGATGCCTCCACAACAAACTTCTAACCGGTTAGCGAACCCAATCACACACAACCTAAAACATCTCAAACCTCCTAAAACGAAGAGAAAAGAAGAACCAGAGGGAGAAACTAAAGCCAAT

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_43

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

241

Start:

7110196

End:

7110436

Strand:

-

>Aa.chr7_Retroposon-L1-dep_43

AAGGAGACTTTGATCGATGCAAAGGAAAACGTCATATAGGATCTTCATCTCTTAACACGGACCCTCGCAAACCAACCTTAGCCATATACTCGCTAAAGGAAGGTCACCTTCACGCAAAGAAAAGAGCTGAAGAACAAGCTCACTGCTGGTCTTGAACCTCACCGTAACCCAACGACATAGAGAAAGCCACATAGATGCCTCCACAACAAACTTCTAACCATAAGACGAACCCAAACAACGA

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_44

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

295

Start:

16522748

End:

16523042

Strand:

-

>Aa.chr7_Retroposon-L1-dep_44

CCACTCCGAAAAACAAAGATGACTAGAGGGAAGAATTAGGCTCAAAGGAGACTTTGACCGATGCAAGGGAAAACGACATATAGGATCTTCATCTCTTAACACGGACCCTCGCAAACCAACTTTAACCATCTACTCGCTAAAGAAAGGTCACCTTCACGAAAAGAAAAGAGCTGACGAACAAACTCACTGCTGATCTTGAACCTTACCCTAACCCAAAGGCAAAGTGAAATCTACATAGATGCCTCCACAACAAACTTCTAACCATAAGACGAACCCAAACAACGACCTAACTCAT

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_45

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

295

Start:

25787648

End:

25787942

Strand:

-

>Aa.chr7_Retroposon-L1-dep_45

GAAAGGAACAACGCCAAACATGATCTACCACTCTTAACACGGACCCTCGCAAACCAACCAAAGCCATCTACACACTAAGGAAGGTCACCTTCACGCAAAGAGAAGAGCTGTAGAACAAACTCACTGCTGGTCTTGACAGCCTCTCCAAAACCGAAAGACTAAAAAGAAGGCCAAGAAGATGCCTCCACAACAAACTTCTAACCGGTTAGCGAACCCAATCACACACAACCTAAAGCATCTCAAACCTCCTAAAACGAAGAGAAGAGAAGAACCAGAGGGAGAAACTAAAGCCAAT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_46

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

450

Start:

5541276

End:

5541725

Strand:

+

>Aa.chr8_Retroposon-L1-dep_46

TTTTGGGTTTTGCCATCTGGATGATATATGGTTGTGGAGCATCTACGAGCTTGTTCCATTTCTTCTTATGTTGTGGAATTTGGCTTCAAGACGAAACAATGGCCTCGATTTCCAAGTCTTGCGAAGAGGTGACCGGTTTTTTTGTCTGTAGATGGATGAAGCTGGCCTATGAGTGTCCGTGTGTAAAATTTGGTGATCCTCTTTGGTCTATGTTCGGTCGCAATTCAAGATTTATGCCTTCTACCTTAGGTTTTCTCGATTGCATTGGATTCTTAGAGTAGCCGTGGTTAAAGATGTTGTGGGCTCTGTTCTTGTCACGTTCTCACTATCGTTTTTACTGGTGTTGTTGCCTTTGAGTGCGAGTTGGGTCCCTCCGCTGTTGTGGTTCTTATGGGTCTTTTTTTTCTTTGGTTTATTTCCAGCGTCTACAAGTTCTATTGAATCGTTAGT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_47

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

264

Start:

8442076

End:

8442339

Strand:

-

>Aa.chr8_Retroposon-L1-dep_47

GAGAAAACATAGGCTTAAGACAAAGAAATGTTGACCTCCGATTAGGAAAACGCCCAAAAAGATAAACAACTTTTCACGCGAACACTCGCAAGCCAGCCATAGTCATCTACAGACTAATAACTGGCCACCTCCTCACAAGAGAAGAATTGGAAATCGAATCCACTACTTCATCTTAAAACCAACTCCGAAACCTAAGAAAGCACTAGAAGAAAGTTAATAGATGTTTCCACAACGAAGTATCATCTTAAAGGTGAACCCAAACGA

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_48

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

184

Start:

12755622

End:

12755805

Strand:

-

>Aa.chr8_Retroposon-L1-dep_48

GAAAGGGACAACGCCAAATAGGATCTACTACTCTTAACACGGACCCTCGCAAACCAACCAAAGTCATCTACACACTAAGGAAGGTCACCTTCACGCAAAGAGAAGAGTTGTAAAACAAGCTCACTGCTGGTCTTGAAAACCTCTCCAAAACCCAAAAGCTAAGAAGAGGTCCAAGTAGATGCCT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_49

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

175

Start:

12894329

End:

12894503

Strand:

+

>Aa.chr8_Retroposon-L1-dep_49

CTTTCTCTTTCCCTTGGGTTTGGGTTTTAGTATCGTCCCGAAGCAGTGGTATCGATCTCATCTCTGCTCTTGTGAGGAGGTGGCTAGTTTAATGGGTGTAGATGACTTATGCTAGTTTGCGAGGGTCCGCGTGTTGGAGATGGTGATCTTCTATGGCGTTTTTCCATCTCAGGTC

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_50

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

245

Start:

14550319

End:

14550563

Strand:

-

>Aa.chr8_Retroposon-L1-dep_50

AGACCGAAGGATCCAAGCAGACGACAACACTAGGCTCAAGTAGAAACCCATGACCTCCGTTGGGAAAACACTAAAAAAGAATAACAACTCTAACTCGCAGACACTCGAAACATAGCCAAAGTCATCTACAGACTGAAAACTAGCAACCTCCTCCCAAGAGTATAGCTGAAAAACGATACCACTGCTTCGTCTTGATACCAAAACCCAAAACACAAAGCAGAGGGAAAGGTAGTATTAGAATTAGT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_51

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

367

Start:

15291032

End:

15291398

Strand:

+

>Aa.chr8_Retroposon-L1-dep_51

GGGTTCGTCTTTCTGATAGTAAGTTGTTGTGGAGGCATCTACTGGCCTATCTCTGAGTACTATGTGGTTTTGGGGTGTGGTTTTCAGACAAAGCAATGGTTTCAATCTTTAACTCTTCTCTTGCGAGGAGGTGGTCAGTTTTAGTCTACAAGTGGTGGAGGCTGGTTTGCGAGTGTCCGCGTGCAAGAGTTTTGGGTCTTAAAAGACTTTTTCCCTGTTGGAGGTCAATGATTGTCCTTGAACCGAGTTCATCTTGAGGTTTCATTCTCTTTGGAGTGTTCTTGTGGGTGTGGTTGCTTAGCTATGTCCTCCTCTTCCATGTGTTCTTTATCTACTAGTGTGGTTGCTGGTTGAGCTTGCTTTTGTA

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_52

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

225

Start:

16278727

End:

16278951

Strand:

+

>Aa.chr8_Retroposon-L1-dep_52

TCGTTTGTTTGGATTCGCCTCTCGGTTAGAAGTTTGTTGTAGTGGCATCTACTTGGTCTTCTTCTTGGCCCTTGGGTTGTGGAGAGGTTATCATGACCAGCACTGAGCTTGTTCTACAACTCTTCTCTTTGCGTGAAGGTGACCTTCTTCTAGTGTGTAGATGGCTAAGGTTGGTTTGTGAGGGTTCGTGTTAAGAGTTGAAGTTCCAATTTGACGTTTTCCTCT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_53

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

87

Start:

16774573

End:

16774659

Strand:

-

>Aa.chr8_Retroposon-L1-dep_53

ATAAATCTTTTCTAGAAAGAGAGCCAGCGGGTACAGAGAAACCCCTGGAGGCAACAACTAAAACGAGAGTAAAATACAAGGAAAACC

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_54

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

313

Start:

24315939

End:

24316251

Strand:

+

>Aa.chr8_Retroposon-L1-dep_54

GGCTCGTCGTCCGGATGGTGCATTGCTGAATGGGCATCTACTAGCTCCTCTCGTGGATCCTTATGGGTTTTGAGATGGGCTCAAGTCTATACAGTTGTGTTAGATCAGCGTTTGTTAACGGGCGGAACGCGGTCTTCTTTTTGTCTGTACGTGGCTAAAGTTGGCGAGCGAGTGTCCGTGGTTAATGGTTGGTGGTCCTCTTTTACGTTTCCCCTTGCAGATTTCAAGGCTCGTCCTTGAAGCTTCTATCCCTTCTCTCTCAGTGGATCTTTGGCTTGGCAGTACATTGTTTTTCGGGTGCTTTGAGCTTCCT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_55

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

269

Start:

24787489

End:

24787757

Strand:

+

>Aa.chr8_Retroposon-L1-dep_55

GTTGTTTGGGTTCGTCTTTCGGTTAAAAGTTTGTTGTGGAGGCATCTACTTGACTTTTTTCTTTGCCTTTGGGTTTTGGAGAAGTTCATGACCAGCAGTGAGCTTGTTGTTCAGATCTTATCTTTGCGTGAAGATGACCTTCCTTTAGTGTGTAGATAGCTAAGGTTGGTTTGCGAGGGTCCGTGTTAAGAGATGAAGATCCTATCTGGCGTTTTCCTTTGCATCCGTTATCGTTTTAAACCTATGTCCCCTCTAGTCATCTTGTCTTC

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_56

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

208

Start:

24791920

End:

24792127

Strand:

+

>Aa.chr8_Retroposon-L1-dep_56

TGTAGAGGCATCTACTATCATTCTTTTTGCCTAGGTGGTGGGAGATAATATCAAGACGAAGCAATGGTGAAGATCTTCAACTTTTCTCTTGCGAGGAAATGACTAATTCTAAGTCTGTAGATGGTTTTGGCTATGTCGCGAGTGTCCGCGTATTAGAGGTGATGATTTTCTTGGGCTTTTTCCGTTCAGTGGGCAAAGCTTTGCTTTG

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_57

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

122

Start:

30571444

End:

30571565

Strand:

+

>Aa.chr8_Retroposon-L1-dep_57

AGATGGCTAAGGTTGGTTTGCGAGGGTCCGTGTTAAGAGATGAAGATCCTATATGACGTTTTCCCTTGCATCGGTCAAAGTCTCCTTAAAGTCTCTTTTGAGCCTAATTCTTTCCTCTAGTT

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_58

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

87

Start:

30819475

End:

30819561

Strand:

-

>Aa.chr8_Retroposon-L1-dep_58

ATAAATTTTTTCTAGGAAGAGAGTCAGCGGGTACAGAGAAACCCCTGGAGGCAACAACTAAAACGAGAGTAAAATACAAGGAAAACC

Arabis alpina (v4.0)

ID:

Aa.chr8_Retroposon-L1-dep_59

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

426

Start:

38508365

End:

38508790

Strand:

+

>Aa.chr8_Retroposon-L1-dep_59

TCTGCTTTCATTTTGTTTCCCTCCAAGTTATGTGTCTTGAGTTGGGTTAGGTCTCGTCGATGGGGTTTGTCTTTCTGATGGTAAGTCGTTGTGGAGGCATCTACTGGCCTTTCTCTGAGCCCTGGTGGTTTGGGCTTTGGTTTTCAGACGAAGCAATGGGTTCGATCTTCAACTCTGCTCTTGCGAGGAGGTGGCTAGGTTTAATCTGTAGGTGATTGAGGTTGGTCTACGAGTGTTCGCGTGTATGAGTTCTAGATCTTAACAGGCGTTTTCCCTGTTGGAGGTCAAGGTTTGTCCTTGAACCGAGTCCATCTCGAGGCTTCAGTTTCTTTGGAGTGTTCTTTGTGGTGTGTTTTTATGGTTATGTCCATTCTCTTCCTTGCGATCTTTCTCTGCTAGTGTTGTTGCCGGTTGAGCTTACTTTTG

Arabis alpina (v4.0)

ID:

scaff_39757_1_Retroposon-L1-dep_60

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

396

Start:

2987

End:

3382

Strand:

+

>scaff_39757_1_Retroposon-L1-dep_60

TGTTTTGGGTTTGGTCTCGTTGATGGGGTTCGTCTTTCTGATGGTAAATCGTTGTGGAGGCATCTACTGGCCTTTCTCTGAGCCCCTGGTGTTTTGGGGGTTGGTTTTCAGACGAAGCAATGGGTTCGATCTTCAACTCTGCTCTTGCGAGGAGGTGGCTAGTTTTAATCTGTAGGTGGTTGAAGCTGGTCTACGAGTGCCCGCGTGTATGAGTTCTAGATCTTAAAAGGCGTTTTCCCTGTTGGAGGTCAAGGCTTGTCCTTGAACCGAGTCCATCTCGAGGTTTCAGTTTCCTTGGAGTGTACATTGTGGTGGGTTTGTATGGTTATGTCCATTCTCTTCCTTGCGATCTTTCTCTGCTAGTGTTGTTGCCGGTTGAGCTTACTTTTGGTCCTT