TBGR-Browse-Aal-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr4_Retroposon-L1-dep_21	Other	Retroposon	Retroposon-L1-dep	119	16987053	16987171	+
Aa.chr5_Retroposon-L1-dep_22	Other	Retroposon	Retroposon-L1-dep	304	4316341	4316644	+
Aa.chr5_Retroposon-L1-dep_23	Other	Retroposon	Retroposon-L1-dep	251	4325279	4325529	-
Aa.chr5_Retroposon-L1-dep_24	Other	Retroposon	Retroposon-L1-dep	283	13207895	13208177	-
Aa.chr5_Retroposon-L1-dep_25	Other	Retroposon	Retroposon-L1-dep	165	14171332	14171496	-
Aa.chr5_Retroposon-L1-dep_26	Other	Retroposon	Retroposon-L1-dep	283	18992391	18992673	+
Aa.chr6_Retroposon-L1-dep_27	Other	Retroposon	Retroposon-L1-dep	248	514079	514326	+
Aa.chr6_Retroposon-L1-dep_28	Other	Retroposon	Retroposon-L1-dep	295	766821	767115	-
Aa.chr6_Retroposon-L1-dep_29	Other	Retroposon	Retroposon-L1-dep	87	5053539	5053625	+
Aa.chr6_Retroposon-L1-dep_30	Other	Retroposon	Retroposon-L1-dep	196	18199415	18199610	-
Aa.chr6_Retroposon-L1-dep_31	Other	Retroposon	Retroposon-L1-dep	419	26075085	26075503	-
Aa.chr6_Retroposon-L1-dep_32	Other	Retroposon	Retroposon-L1-dep	217	26928098	26928314	-
Aa.chr6_Retroposon-L1-dep_33	Other	Retroposon	Retroposon-L1-dep	356	29468481	29468836	+
Aa.chr6_Retroposon-L1-dep_34	Other	Retroposon	Retroposon-L1-dep	147	31086967	31087113	-
Aa.chr6_Retroposon-L1-dep_35	Other	Retroposon	Retroposon-L1-dep	87	32329781	32329867	-
Aa.chr6_Retroposon-L1-dep_36	Other	Retroposon	Retroposon-L1-dep	295	35366821	35367115	-
Aa.chr7_Retroposon-L1-dep_37	Other	Retroposon	Retroposon-L1-dep	138	2380305	2380442	+
Aa.chr7_Retroposon-L1-dep_38	Other	Retroposon	Retroposon-L1-dep	259	3198122	3198380	+
Aa.chr7_Retroposon-L1-dep_39	Other	Retroposon	Retroposon-L1-dep	205	4838968	4839172	-
Aa.chr7_Retroposon-L1-dep_40	Other	Retroposon	Retroposon-L1-dep	248	5887382	5887629	-

Arabis alpina (v4.0)

ID:

Aa.chr4_Retroposon-L1-dep_21

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

119

Start:

16987053

End:

16987171

Strand:

+

>Aa.chr4_Retroposon-L1-dep_21

GGCTTTGGTTTCCATCTCTCCTCTTGCGAGGAGGTAGCTAGCTTTGGTCTGTAGATGGCTTTATCTAGTTTGCGAGTGTCCGCGTGGTAGAGTATGGTCTCCTTCCTTAGTGGTTTACC

Arabis alpina (v4.0)

ID:

Aa.chr5_Retroposon-L1-dep_22

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

304

Start:

4316341

End:

4316644

Strand:

+

>Aa.chr5_Retroposon-L1-dep_22

TGGTTTTGGGGTGTGGTTTTCAGACAAAGTAATGGTTTCGATCTTTAACTCTTCTCTTGCGAGGAGGTGGTCAGTTTTAATCTATATGTGGTTGAGGCTGGTTTGCGAATGTCCGCGTGCAAGAGTTTTGGGTCTTAGAAGGCATTTTCACTGTTGGAGGTCAAGGATTGTCCTTGAACCGAGTTCATCTTGAGGTTTCAGTCTTTTGGAGTGTTCTTGTGGGTGTGGTTTCTTAGCCATGTCCTCCTCTTTCATGTATTTTTTCTCTGCTAGTGTGGTTGCCGGTTGAATTTGCTTTTGGATC

Arabis alpina (v4.0)

ID:

Aa.chr5_Retroposon-L1-dep_23

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

251

Start:

4325279

End:

4325529

Strand:

-

>Aa.chr5_Retroposon-L1-dep_23

AAAGAGAACCTTGAAATCTACCTTGAATACTCCAACTAGGATCACCAACTCTTACACGCGAATACAACAAACCAACCTTTGCTACCTACAAACAAAAGGACAACCACCTCCTCGCAAGATAAGAATCGGAGAACGAAACCACTGCAAAGTCTTGAGCTCAACCACAAAATCCTAAGGAACCACAAAGAGAACTAGTAGGTGCCTCTACCCTAGCAAACCATCTGATTGAAGAACCCCAAAAGCATAAACCT

Arabis alpina (v4.0)

ID:

Aa.chr5_Retroposon-L1-dep_24

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

283

Start:

13207895

End:

13208177

Strand:

-

>Aa.chr5_Retroposon-L1-dep_24

CCACTCTAAAAACAAGATGACTAGAGGGAAGAATTAGGCTCAAAGGAGACTTTGACCGATGCAAAGGAAAACGCCATATAAGATCTTCATCTCTTAACACGGACCCTCGCAAACCAACCTTAGCCATCTACTCGCTAAAGGAAGGTCACCTTCATGCAAAGAAAAGAGCGGAAGAACAAGCTCACTGCTGGTCTTGAACCTCACCATAACCCAAAGACAAAGTGAAAGCCACATAGATGCCTCCACAACAAACTTCTAACTATAAGACGAACCCAAACAACGA

Arabis alpina (v4.0)

ID:

Aa.chr5_Retroposon-L1-dep_25

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

165

Start:

14171332

End:

14171496

Strand:

-

>Aa.chr5_Retroposon-L1-dep_25

AAGGAGACCAAACTCTAGCACGCGGACACTCGCAAACTAGCTAAGACCATCTACAGACCAAAGCTAGTTACCTCCTCGCAAGAGCAGAGATGGAAACCAAAGCCAATGCTTAGACTTGATACCAACCCAATACAAAAAATGGGACAAGCAGTAGATGCCTCCACA

Arabis alpina (v4.0)

ID:

Aa.chr5_Retroposon-L1-dep_26

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

283

Start:

18992391

End:

18992673

Strand:

+

>Aa.chr5_Retroposon-L1-dep_26

GGCTCGTCATCCGGATGGTGCATTGCTGAAGGGGCATCTACTAGCTCCTCTCGTGGATCCTTATGGGTTTTGAGATGGGCTCAAGTCTATACAGTTGTGTTAGATCAGCGTTTGTTAACGGGCGGAACGCGGTCTTCTTTTTGTCTGTAGGTGGCTAAAGTTGGCGAGCGAGTGTCCGTGGTTAATGGTTGGTGGTCCTCTTTTACGTTTCCCCTTGCAGATTTCAAGGCTCGTCCTTGAAGCTTCTATCCCTTCGCTCTCAGTGGATCTTTGGCTTGGCAGT

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_27

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

248

Start:

514079

End:

514326

Strand:

+

>Aa.chr6_Retroposon-L1-dep_27

AGGTCTTGTTGTTTGGGCTCGGTTTGGTGATGCTATATTGTTATGGAGGCATCTACCGTCTTTTCCCTATACTTTCGTTTTAGGAAACGGACGTCAAGACGAAGCAGTGGTATCGATTTTCAGTATTCTTGCGAGGAGGTGACTATTGTTTGGTCTGTAGATGGCTTTGGCTAGTTTGCGAGTGACCGCGTGTTAGAGTTGGGGATCTTCCTTGGCGTTTTCCCTTCGGAAGTCAAGGTTGTGCCTTG

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_28

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

295

Start:

766821

End:

767115

Strand:

-

>Aa.chr6_Retroposon-L1-dep_28

CCACTCCGAAAAACAAATATGACTAGAGGGAATAATTAGGCTCAAAGGAGACTTTGACCGATGCAAGGGAAAACGTCATATAGGATCTTCATCTCTTAACACTGACCCTCGCAAACCAACCTTAGCCATCTACTCGCTAAAGGAAAGTCACCTTCACGCAAAGAAAAGAGCTGACGAACAAACTCACTGCTGGTCTTGAACCTTACCCTAACCCAAAGGCAAAGTGAAATCCACATAGATGCCTCCACAACAAACTTCTAACCATAAGACGAACCCAAACAACGACCTAACTCAT

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_29

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

87

Start:

5053539

End:

5053625

Strand:

+

>Aa.chr6_Retroposon-L1-dep_29

TAACCAGTCCTTAATTTGTAAGTAGCTACGGTTGGTTTATGAATGTGTATTCGTGTAGAAGAATTGTTGGTCTTCTTTAGCGTTTTC

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_30

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

196

Start:

18199415

End:

18199610

Strand:

-

>Aa.chr6_Retroposon-L1-dep_30

GGGAAACCGCTGTAGAGGGAAACCAACTCCAACACGCGGACACTCGCAAGCAAGCTCAAGCCACCTACAGACAAGAACAAGCCACCTCCTCGCAAGAGCAAAGCTGGCAACCGACACCATTGCATCGACTTGATACCAAATCCACAAGCAAAGCAAAACGAACCGGCAGTAGATGCCTCCACAACAATATACCATC

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_31

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

419

Start:

26075085

End:

26075503

Strand:

-

>Aa.chr6_Retroposon-L1-dep_31

CAAGCTCAACAAGCAACAACACTAACGGAATAGACCACAAAACTGAATAGAACCAGAGCACAGTTACTACTTTGAAGCAACCTCACCCAAGAACCCGACCTTGAGATAAAACTAGGCTCAAAGTAATGATACTTTGAAAATTGATTGGGAAAACGCCGACCAAGACCAATAGCTTTTACACACGAACACTTATAGATCAACCTCAATCACCTACACATAGAGAACTAACCACCTCCTGGCAAGAGAAAAGCTAACAATCAAACCCACTACTTCGTCTTGATACCAACCTCCAAAGCCTTAGCGGAAGGATAGTAGATGCCTCCATAGCGAATCTCCATCAAAACGACGAACCCAACCAACCGAAACCTAGCCACAACAAAGCACAAGAACCGGCCAAGAAAACAAAAGCAGAAGTAAGA

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_32

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

217

Start:

26928098

End:

26928314

Strand:

-

>Aa.chr6_Retroposon-L1-dep_32

GAAAGGGACAACACCAAATAGGATCTACTTCTCTTAACACAGACCCTCGCAAACCAACCAAAGCCATCTACACACTAAGGAAGGTCACCTTCACGCGAAGAGAAGAGTTGTAGAACAAGCTCACTACTGGTCTTGAAAATCTTTCCAAAACCCAAAAGCTAAGAAGAGGCCCAAGTAGATGCCTCCACAACAAACTTCTGACCGGTTAGCGAACCCA

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_33

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

356

Start:

29468481

End:

29468836

Strand:

+

>Aa.chr6_Retroposon-L1-dep_33

TGTGGAGGCATCTACTGCTTGTTTTCCATGTTTAGGTGTGGGAAGTTAGTATCAAGACGAAGCAGTGGTATCGATCTTCATCTCTGCTCTTGCGAGGAGGTGTCTAGTGTTTTACTTGTAGATGGTTTTCACTAGTTTGCGAAGGTCCGCGTGTTAGAGGTGCTGATCTTCTTGGGCGTTTTCTATCAGTCTTCAAGGCTATGTTTTGTGACAGTGATTGTTGAATTTTGGTCTCTTCGGTTAGTTTTGCTTGGGGGTTGTGTTTGTGCTTCGGGTTTCTCTGTGTTGCCTTTCTCTCCGTCTTCTTTGTTGTTGGTAGAGTTTGGTTTGGTGTTTTCTTCTTTGGTTGCCTTTCA

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_34

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

147

Start:

31086967

End:

31087113

Strand:

-

>Aa.chr6_Retroposon-L1-dep_34

CACGCGGACACTCGCAAGCTAACTAAGACCATCTACAGACCAAAGCTAGCCACCTCCTCGCAAGAGCAGAGATGGAAACCAATGCCAAAGCTTAGACTTGAGACCAACCCAATACAATAATAGGGAAAAGCAGTATATGTCTCCACA

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_35

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

87

Start:

32329781

End:

32329867

Strand:

-

>Aa.chr6_Retroposon-L1-dep_35

ATAAATCTTTTCTACGAAGAGAGCCAGCGGGTACAGAGAAACCCCCGGGAACAACAACTAAAACGAGAGTAAAATATAAGGAAAACC

Arabis alpina (v4.0)

ID:

Aa.chr6_Retroposon-L1-dep_36

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

295

Start:

35366821

End:

35367115

Strand:

-

>Aa.chr6_Retroposon-L1-dep_36

CCACTCCGAAAAACAAAGATGACTAGAGGGAAGAATTAGGCTCAAAGGAGACTTTGACCGATGCAAGGGAAAACGTCATATAGGATCTTCATCTCTTAACACGGACCCTCGCAAACCAACCTTAGCCATCTACTCGCTAAAGGAAGGTCACCTTCACGCAAAGAAAAAAGCTGACGAACAAACTCATTGCTGGTCTTGAACCTTACCCTAACCCAAAGGCAAAGTGAAATCCACATAGATGCCTCCACAACAAACTTCTAACCATAAGACGAACCCAAACAACGACCTAACTCAT

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_37

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

138

Start:

2380305

End:

2380442

Strand:

+

>Aa.chr7_Retroposon-L1-dep_37

GTGGTATCGATTTTCATCTCTACTCTTGCGAGGAGGTGACTAGTTTAATGGGTGTAGATGACTTATGCTAGTTTGCGAGGTTCCGTGTGTTGGAGATAGTGATCTTTTATGGCGTTTTTCCATCTCCGGTCAAGACTT

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_38

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

259

Start:

3198122

End:

3198380

Strand:

+

>Aa.chr7_Retroposon-L1-dep_38

GGTTTAAGTTTGTGCAGTGTGGCTCGTCATTCGGATGGTGCATTGCTGAAGGGGCATCTACTAGCTCTTCTCATGGATCCTTATGGGTTTTGAGATGGGCTCAAGTCTATACAGTTGTGTTAGATCATCATTTGTTAACAGGTGGAACGCGGTCTTCTTTTTATCTGTAGGTGGCTAAAGTTGGCGAGCGAGTGTCCGTGGTTAATGGTTGGTGGTCCTCTTTAACGTTTCCCCTTGCAGATTTCAAGGCTCGTCCTTG

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_39

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

205

Start:

4838968

End:

4839172

Strand:

-

>Aa.chr7_Retroposon-L1-dep_39

CAAGACAAAAGTCTTGACCACCGCTGGTAAACCACTAAGGAAGGAGACCATACTTTAGCACGCGGACACTCGCAAGCTAACTAAGACAATCTACAGACCAAAGCTAGCCACCTCTTCGCAAGAGCAGAGATGGAAACCAATGCCAATGCTTAGATTTGATATCAACCCAATACAATCATAGGAAAAAGCAGTAGATGTCTCCACA

Arabis alpina (v4.0)

ID:

Aa.chr7_Retroposon-L1-dep_40

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

248

Start:

5887382

End:

5887629

Strand:

-

>Aa.chr7_Retroposon-L1-dep_40

AAGCACAAGCCTTGCCCTCAAATGGAAAAACGGTAGAGAAGATCAACAAATCCAACACGCGGACCCTCGCAAACTAGGCAAAGTCATCTACACCCTTAAACCTAGCCACCTCCTCGCAAGAGCAGAGTTGAAGATCGATACCACTCCTTCTGGATGATACCATAACCCAAACCCAAAGGAATGTGAAAGGCAGCAGATAACTCCAAAACAATAGCACATCACAAAAGCGAACCCACACAACAGGATCT