ID:

Thla_scaffold1_LTR-Copia_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

375

Start:

1511646  

End:

1512020

Strand:

-

>Thla_scaffold1_LTR-Copia_21

GAAAGTTTTAGAACTTAGAGAACTTAGGAACTTCACTTAACTTCCCTTATTATTTCTTTTAGCTTGTTAGTTACAAAATGAGAGAGGAGGTAGCTATTTATATCCTCCAAAGTACAAAATATCTAAAATATTTTATTCCTAAATCTAGAGAATTCTATCTTAATATCTAGATTATTTTACAACAATTATCTAGAGAAATCTCTAGATATTTATTCTCTACAACTCTCTAGAATATTTTAAGGAGGTGAAAGTGTTGATTTTTCTAGAGAAAACTCTAGAATCTTTGATTAAGCATAATTGGGTTTTGGCCCAATTATTATTGGATCATTAACCTAATATTTAAGCTTGATCCAAAATCAAGTTTATCTTTCAACA

ID:

Thla_scaffold1_LTR-Copia_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4068

Start:

1512021  

End:

1516088

Strand:

-

>Thla_scaffold1_LTR-Copia_22

CCCCCTCTTAAACTTGATTTTGCTACTCCAAGCAAACTTCTCATCTTGATAAAGGTTTTACGCTTGAGTGATTTGGTAAAGATGTCAGCTACTTGATCGTCCGTCTTCACGTACTCCAACTGCACATCCATCTTGGTAACACATTCTCTAATGTAATGATAGCGAGTGTCGATGTGCTTACTTCGATCATGGAAGACAGGATTCTTTGCCAAAGCTATTGCTGACTTGTTGTCCACAAAGATCTTCGTCGGCTCTTCTTGTGGCAAACTCAAATCCTTTAATAAGTTTCGTAACCAAATAGCATGGAAAACACATGAAGTAACAGCTACATACTCCGCTTCACAAGTGGAAAGAGTGACAATCGGTTGCTTCTTCGATATCCATGTGAAAGTTGTTTCTCCAATGAAAAACACAAAACCACTTGTGCTTTTCCGATCATCTACGTCTCCACCCCAGTCGCTATCGCTATATCCAACAAGCTTGTAATCATCAGAAATAGAGTAATACAAGCCAAAGTCGATCGTACCTTTGATATAGCGAAGGATCCTCTTAGCTGCCTTGAAGTGAGTGGTTGTTGGATGCTCCATGTATCGGCTCACAACTCCAACTGCATGTAAGATATCAGGCCTTGTGCATGTTAAGTATCGTAGACTCCCAACGAAACTCTTAAAGAGTGTTGGATCCACACTCTCTCCTTCATCATGCTTTGATAACTTAGCTCCACATTCCATTGGAGTACAAACTGGGTTCGAGTCATCCATCTTGAACTTCTTCAGCACTTCTTTGGCATAACCTTCTTGAGAGATGAAGATTCCATTGTCTTCTTGTTTCACTTCAATTCCAAGGTAGTAAGACATCAATCCAATATCGGTCATCTCGAACTCCTTCGTCATCTCCTTCTTGAATTCCTCGAACATACTTGGATTGCTGCCTGTGAATATCAAGTCATCTACATATAAGCATGCAATCAATATATCATTGTTATGTGTTTTGATATATAGTGCATGCTCATATGGACACTTGATGAAGCTTTTCTCCTTGAAATACTTATCAATACGAGTGTTCCAAGCTCTTGGTGCTTGTTTCAACCCATAGAGCGCCTTCTTTAACCTCAAGACTTTGTCTTCTTCTCCTTTAACTATGTAGCCTCGTGGTTGCTCAATGTAGACTTCTTCCTCAAGATCTCCATTTAGGAAGGCTGATTTGACATCCATTTGATGTATCCTCCACCTGTTTTGGGCTGCTAATGAAATGATTAGTCTAACTGTTTCTAATCGAGCAACAGGAGCAAATACCTCGTCATAGTCGATTCCAGCTCTTTGACTATAGTCCTTTGCCACCAATCTTGCCTTGTATCTTTCAACTTCTCCTTTGGAGTTCTTCTTCGCTTTGTACACCCATTTTACACCAATCGCCTTATGCCCATTTGGAAGTGAAGCTAACTCCCATGTCTCATTCTTCTGTATTGACTTGATCTCTTCATCCATTGCGTTTCTCCATGTCTTTTTCTCCATTGCTTCCTGGAAGTTCATGGGTTCGCAATCCGCAAACAGGCAAAATAGAGTAAGGTTTTTTTGATTTTCGGTTACCTCGTAAAGCTCTTGCAGACTTCTAAAACGTGGAGTCCTTTCACTCGAACTCTCATCTCCTTGAGAACTTGGTGTTGGTGAGGTTGGTGGAGTAATTGGCTCCTCTCTTGGCTGCTCCAAATCATCTTCTTCAACATGTGGAAAGAAGTTGTAGTTCTCATCATTTGATCTCCAATCCCATTCTCCTTCTTCATCAAAGATGACATTCCGACTGATGATTGTCTTCTTTGTATCAGGATTGTAGAGCTTGTAACCTTTGGAGTTTGCATCGTACCCAATGAAGATGTACTTCTCACTTTTGTCATCTAGCTTGCTTCGTTTCTCATCAGGTACATGAGCGTGGGCAAGGCTTCCAAAGACTCTTAGATGTGAAACACCGGGCTTTCTTCCACTCCAAGCTTCTTGTGGTGTTTTCTCCCAAACACTTCTTGTTGGAGATCTGTTTGACAGATAGACCGCACATGCAACTGCTTCTGCCCAAAACTCCTTTGGTAGCTTCTTACTTTTGAGCATGCTTCTCGCCATCTCAAGAATTGTTCTGTTCTTTCTTTCTGCTACTCCATTCTGTTGAGGGGATCTTGGCACCGTCAATTGTCTCCTAATGCCATTGTCTTCACAATACTTCAGAAACTCTTTGGACATGAACTCTCCTCCTCGATCAGATCTCATAGCTTTGATCACAAGGCCACTTTCCTTCTCAACATGGGCTTTAAACTTTTTGAAGTTCTCAAATACTTCTGATTTTTCTTTCAAAAAGTAAACCCATGTTTTTCTTGAAAAGTCATCAATAAAGAGAAGGAAGTAGTTACTCTTACCGAGTGATCTTGGTTTAATTGGGCCACAAACATCTGTATGTATGAGCTCCAATGGCTTCCGTGCTCTTGTCTCTGACTCCTTTGGAAAGCTCATTTTGAATTGCTTTCCAAGTAGGCACCCATCACACACCTGATTTGGATGATTGATGCAGGGCAATCCTCTCACCATTTCTTTCTTAGAGAGTAGCTCCAAGCCTCCAAAGTTGAGATGTCCATAACGAAGATGCCAAAGCCAAGACTCCTCCTTGTAGCACATCTTAAGACATTTTGCGATGTCATTTTGAATGTTAAGAACAAACATTCTATTCTTTGACATCGGCACCTTGGTGATGAGATTGTTAGTTTGATCTCTTATAGAAAGGCTATTATCTTTTAGTCGAATATCATAACCTTTCTCTAAGAGTTGTCCAAGGCTCAAGATGTTGGTCTTCATACTTGGAATATAGTAAACGTTGGAGATGAATTGATGATCTCCATTCTTCATTCGGATGAGAATTTTTCCTTTACCTTTCACCTCCATCTTTGATTCATCTCCTAAGGCCACGTCTCCTTTCACTGATTCATCGAGCTCCACGAACATGCTTCTTTTCCCGCACATGTGATTGCTTGCACCGCTGTCAAGGTACCACTTGTGGAAATCATCTCTTTCATCCTTCTTGTACGCCATTAATAGCATATCTTCTTCTTGGCTTCTTTCTTCAGCATAGTTGAACTTCTCTTCAACTCTATTGTTGTTTGGAGCTTTGCATTCAGAAGCATAATGTCCAAACTTCCCACAATTATAGCATTTGACGTTTGATTTGTCGTACCTTGGTTTTGGAGATCCTCTCCCACGTCCTCTTGATGAGCTTTCTCCTCTTTGGTTAGTCTTGTCTTCATAGGACCTCCAGCCACGTCCATTTCCATAACCACAACCTCTTCCTCGTCCTTGACCGCCACCTCTTCTTGGATGACTTCGGCCGCTTCCATCTTTGGTTTGATCAATTTGCATCTTGAGTACTTGTTCTGCAAGGTCTTCCTTCTTCTTCTTCTTTTCTTCATAGGCTTGTAGTGATCCTAGTAGTTGCTCCATTGTCATATCCTCCAAATCTTTCGTCTCTTCAATGACAGTGACAATATGCTCAAATTTTGAATCCAACGATCTAAGAACCTTCTCCATGATTCTTACTTCATCTAGCTTCTCCCCATTCCTCTTTAGGTTATTAGTAACCGCTAGAACTCTTGAGAAGTAATCTTGGACAAGTTCACCTTCCTTCATTTGTAATGCTTCAAATTCTCCTCTTAGAGTTTGAAGACGTACCTTCTTGACTTGCTCTGCTCCCTTGTAAGAAGTTCGAAGCTTCTCCCATGCTTCTTTGGCCATCTTTGCTCCGGCAACCTTCTCGAATGTGTCTTCATCTAATCCTTGATAGATGAGACAGAGAGCCTTCTTGTCTCTCTTCCTTGAGTCTCTCAAACTGTCCTTTTGAGTTTGAGAAAGACTACCTTCATTCTCCGGTTCAATGTAGCCTTTTTGGACAATCTCCCACACGTCATGTGCTCCTAGAATGGCCACCATTCTTAGACTCCAGTTGTCGTAGTTGCTCTTAGTGAGCATTGGAACTTGGAAGGGAACACCATTACTTGCCATCTTTAAGAGAATCTTCTAGCTCTGATACCACTTT

ID:

Thla_scaffold1_LTR-Copia_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

370

Start:

1516173  

End:

1516542

Strand:

-

>Thla_scaffold1_LTR-Copia_23

TTTTAGAACTTAGAGAACTTAGGAACTTCACTTAACTTCCCTTATTATTTCTTTTAGCTTGTTAGTTACAAAATGAGAGAGGAGGTAGCTATTTATAGCCTCCAAAGTACAAAATATCTAAAATATTTTATTCCTAAATCTAGAGAATTCTATCTTAATATCTAGATTATTTTACAACAATTATCTAGAGAAATCTCTAGATATTTATTCTCTACAACTCTCTAGAACATTTTAAGGAGGTGGAAGTGTTGATTTTTCTAGAGAAAACTCTAGAATCTTTGATTAAGCATAATTGGGTTTTGGCCCAATTATTATTGGATCATTAACCCAATATTTAAGCTTGATCCAAAATCAAGTTTATCTTTCAACA

ID:

Thla_scaffold10_LTR-Copia_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4356

Start:

175173  

End:

179528

Strand:

-

>Thla_scaffold10_LTR-Copia_24

CCCCCTCAAGATGGAGGTGGTTTCGAAACTCCAATCTTGGCTGTGAAGTTCTGGAATGATCCTCGTGGAAGAGGTTTTGTGAGAGTATCTGCCAACTGATCCTTTGTTGATACGTGAGTCACCCTAAGAGCACCGGACTGTACTTGAGTTCGTATAAAATGATAATCCAACGCGACATGCTTCATACGTGAGTGAAAAACTGGATTAGCACATAGATATATAGCACCAACGTTATCACAATATATTACCGGGGTTATTGAAAGCTTGATGCCGAGTTCATCCAGCAATGAGCAGATCCATTTCATTTCTGAAGAAGTGTTGGCGACAGCTCTATACTCGGCTTCTGTAGACGATCGAGCAACACTCTTTTGTTTCTTTGACGACCAGGAGACAGGATGAGAGCCCATGTATACTAGGTAGCCATTAGTGGATACAAAGTCATCGGAGTCACCTCCCCAGTCCGCATTGGAGTATGCATGAAGAGAGCTATTGTTCCCCTTTCGTAGAAAGATGCCATGATTCGCGGTGCCGGCTAAGTAACGGAGCACTCTTTTGACTGCATTCCAGTGTTCGTTGGTGGGTGAATGCATGAACTGAGACAAACGATTGACTGCGTAGGATATGTCTGGTCTGGTGAAAGCTAGATACTGAAGACTTCCAACAGCAGTTCTGTACTGTAGAGGATCAGAGAGAAGCGTACCGGAATGAAGTGACAGTTTTGGTGTAGACGCCATTGGAGTTGCTACGGGCTTTGCGTTGAGCATATTTGTGCGCTCGAGAAGATCAACAATGTACTTGCGCTGACTCATATGCAATCCAGAGAAGTTGCGTTTCACTTCAATTCCAAGAAAATAATGTAGATCTTCATGTTCTTTAACCGAGAAACGAGAGGACAGAGCATCCAAAGTTTGTTGTATGAGGCCTCTATCATTACCAGTAACCAGTATATCATCAACATATACTAAGATATAGACGATGGACTGACCTTTCTTCAAGATGAATAATGAAGTGTCGGAAATGGAGTTAGTGAAACCCGAGCTGACGAGAAAATTGCGAAGTTCCATGTACCAGGCGCGGGGAGCTTGTTTGAGACCGTATATTGCTTTCCGGAGGCGACATACATGTGTTGGTCTGTCTTTATCCACAAATCCTGGTGGCTGGGCCATGTATACTTCATCAAGTAGTGTACCTTGTAAAAACGCATTGTTGACATCCAACTGTCGAACTGGCCAATCCCGATCAACTGCAACAACGAGAACTATCCGAATTGTAGTGGATTTGACCACCGGGCTGAACGTCTCAGAGTAGTCGAGTCCAGGACGTTGATTGTACCCTTTGGCGACGAGTCGAGCCTTGTAGCGATTAACAGTTCCATCTGGATTATACTTTTTGGTGAATATCCAACGACAACCGACGATCGTAACATCTGATGATGGCAGCGGCACAAGGTCCCAGCTATGATTTCCAATTTGTGCATTTATTTCAGAGGTACAAGCCTTTCGCCATCGCTCATCTTTGAGGGCTTGTAGTGCCGTTCGTGGTTCTGTATTTGGAGAGAGGGTTAAGGCCTTTGCGTATTTAGGATTGGGTTTGGCGATTCCGTCTTTGGCTCTAGTGTCCATTTTGTGATTGTTTAGTGGATTTATTGGAGGAGGTGGATGTAACGGAGGAGGTGGAGGTGGAGAAAGAAGTGTTGGTGGTGGCGTTCTCGATGGAGACGACGATATGGATGTGGTGTTTGGAGAACTGGGCTGTGGTGTAGAATTTGTGTGGGCCGAGTTATCTGAGATGGCGGTGTTTGGTGAGGAGGGAGTATGTGTAGGTTGGGCCTGTGAAGGGGAATTGTTTTGGTTTGACATCTGGGCTGTGGGTTGCAGCCCATTTTGGTGTGGAGCAGTGGGCTCAGAGAAGGGAGAAACAGAATCTGAGATAGAGTTTGGGGACGATACCTGAGACGACGAAGGCGATGCCTCTGAAGACTGCAGTGACGATTGTATTCCATGGTGAGGATCCGAGATTTGGGGTATCGACGGCAAAGCTGTGGTGACGGGAATGAGCGTTTCATGCGGTAGACCACTCGGAATTGTAGACACCGCATCGTCGTGGATTTGTGTCACAGCTCGATCAGAATTTCTGAAAGGAAAACTCATCTCTTCGAAGCACACATGGCGAGACACATACACACGTCTTGTAGGTATGTGGTAGCATAGATATGCACTTTGTGTAGCAGAATAGCCAAAGAAAGCACACTGCAGTGATCGATCCTCTAACTTGTGGCGATTGTATGGTCTTAACCAGGGATAGCAAGCGCAGTCGAATACCCGTAGTTTGTTATAGTTGGGCGTTTTTCCAAACAACCTCTGGAATGGTGATTGCATCGACAGGATGGGTGTTGGAAGGCGGTTAATTAAGTAGACTGCCACTGCGAAAGCAAACGGCCAGTATTGCTTCGGAACTGAGGACTGTGAGAGTAAAGTGAGCCCAATCTCCACGATATGACGGTGTTTTCTTTCAAAGATGCCATTGTGCTCCGGGGTGTGTGGAAGAGAAGTAAGGTGCGTGATACCCATTGATGTAAAGTAGTCTCGTAACGCAACAAATTCACCACCATTGTCCAAATAAAAGGTACTGATTTTGGCTTGGAAAAAGTTTTCGACAAGATTTTTGAAGGCTTGAACTGTTGTTTTGACATGAGATTTCTGTTTAAGGGGGTATAGCCATGTATATCTGGTAAAATAGTCAACAATGACCAAGTAGTATTTGAAGTTATCAATAGAAAGAATAGGAGAGCTCCAGACATCCGAATAAAGATATTCTAAAGGGCGGGTCGATTTTATTGTGGATTGAGAAAATGGAAGTTTGTGGCTCTTATTGATTAAACAATCAGTGCAGGAAAAATTTGTTTGAGATGGTGTGGAAACAGGAAGAGAAAAGCTTGAAACAATGGTGTTTAAGATTGAAGATGACGAATGGCCAAGTCTTGAATGCCAAAAGGAGAGTGTTGCCTTTGATGAGACCGATATTGTGAGAGCATGAGGTTGTGAGAGTGTCACCGGCCATTCATATAGCTCATCCCTAGTTTTGCCGGAGAGTAATCGATCCCCCGTTCTCAGATCCTTCACCTGAAAGGAAGCAGGGAAAAATTCCACAGAGACTTGATTAGCATTGCATAGGCGATAAACGGAGACAAGATTCTTTCGTATATCAGGTACGTAAAGAACATTGTTTAAGTTTAAAGCACGATTATAAGCAGGAAGAATTGTTGAACCAGTATGTGTGATAGGAATGGTGGAACCGTCCGCAATCATCACATCATCGCCACCGTGATAGGGCTGGTGAAGCGATAAGTTGTTCAGATCAGATGTGATGTGGTGAGTCGCTCCACTATCTAGGAGCCAGTTGTTTGGTGTGTATTGATTGCCGACAGCAAGATTTGCACGTGGATTCCATGGTGTGAAGGGTGAGGGAGGCTGTTGAATTGCCTTAGCTTGAAACGTGGAGAGTTTGCTACATCGTTTGGCACTGTGGCCCTGAACTCCACAAATTTGACAACGCCCAAGGTATGGCCTCTGTGTCCTCGGTTCTGTAGGCTGTTGTTGGTGATAAGATTGCCAATTTGACTGCTGTGATTGACGCCAATGATTGTTATTCTGCCTGTTGGAGTTGTTGCTATTGCGATGTTGAACAGCATGAGCAGAGGTTGGAGTATGAGAGACAATAGTCTCATTTGTCGAGAGTAACTTGGCTTCGTGATTGAGGAGACGCTCATGAAGTTCAGTGATGGAGGGTGGCGCATCTCTTCCTTCTACTTGATCTACAACAGATTTGTAGTCATCAGAGAGGCCCTCTAGGATCAGATCAATCTGGTCTTCATGATCGACTCCCTTCCCAAGTATTGCAAGCTGGTCCAAGCGTGTGGTAATGCCTTGTAGGTACACATCAATGGTCTTGTTCTCCTTCTTCCAATTTTTCAGTTGTGTCTTGAGTTGTTTTATATGCCCACGACTTGGTTTAGCATATGTTGCAGCAAGTGTATGCCAGATCTTGGAGGATGTGGTGGCTCGAGAGACAAGCGGCTGAAGGGTGGCAGAGATAGCACCAATAAGAGCACTATATATGAGTTTGTCTTGACGTTTCCACAGAGTAAACACCGGATTGACAGAGATCTGATCGCCAGTGGTGAGTGTGGCAGTCGGAGTTGTGCGAGATCCATCAAGATGGCCTGCTAGATCATAGCCATCTAGCAAAGCATGAACCTGGAGACTCCACATGAGGTAATTGGTAGCATTTAGCTTGGTAACATTTGACATGTTGATGTTGAGAAGCGTCTGGTTTGAGGCGATGATTGTGTCAGTG

ID:

Thla_scaffold10_LTR-Copia_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2262

Start:

281200  

End:

283461

Strand:

+

>Thla_scaffold10_LTR-Copia_25

ATCTCTTCTTCAATTTTTTTTCCTACACCTCTTTTCCCAAAAACATCATATCCACATCCAACAACATCGACACTATCTTGATCCCAAACTCCACCAACAGTCTCATAAATCTGAATATGTCTAATGTCACAAAGCTTACATCCTCCAACTACCTTATGTGGAGCTTCCAAGTTCATGCACTTTTTGATGGCTATGATCTTGGAGGGTTTCTCGACGGATCCACAGCCATCCCTGTTCCCCTCATCACTATCGCCGGTAATGAAAGTCTGAATCCGGCATACACAGCGTGGAAACGTCAAGACAAGCTGATCTACAGCACCTTTCTTGGTGCTATCACCACCCCCATTCAACCTCTGCTTTCTCGCTCTACCACAGCAGCCGAAGCCTGGTCCACACTCGCGGATACCTACGCTAAACCCAGCAGAGGACACATGAAACAACTAAAGCAACAACTCAAAAACTGGACAAAAGATAACAAATCCATCGATGACTACATCCAAGACCTTACCACCTGTTTTGATTGTCTTGCACTTCTGGGCTAATCCATTGACCACGAAGATCAAGTCGATTACATTTTTGAAGGTCTACCAGAGGAGTACAAGGTGATAGCCAATCAGATCGAAGGCAGAGACACTCCTCTTTCAATCATAGAGATCCACAAAAAGCTACTCAATCATGAGTCCAAACTAATGTCCTCCTCTCAACTCTCAGCCCACACCCCTGCATCCGCAAACTATGTCAACAATCGCAACAACAACAAAGGCTACTCTAAGCCTCCGTTCAAGCACCAAACTTGGCAGTCTCACAACAAATCAGAAATGAGTCACAACGGACCGAGACCATACCTTGGGAAGTGTCAAATCGATGGTACCCAAAGACACAGTGAGAGAAGATGTCCACAGCTTGCATCTCACACCACGCCTGCACCACAACTAGCTCCTTGGCAACCCCGAGCAAATTTTGCCGGCTCTTCTATTAACCACAACCCGTGGTTACTAGACTCGGGTGCCACGCATTATATCTCATCAGATCTGGCAAACTTCTCACTCCATCACCCTTACACTGGTGGAGAGGAAGTAGTTGTTGGTAATGGCACAGGTTTACCTATTTCTCATACAGGCTACACTCTTCTTCCTCATTCATCACGCCCTATACACTTATCTGATATACTTTGTACCTGAAATTAAGAAGAATCCAATTTCAGTGTACAAGCTATGCAATGCTAATCAAGTCTCGGTGCATTTTTACCCTTCATGTTTTCAGGTGTGGGATCTTCAAACGGAGGCCCCATTGCTCCAAGGCTGTACCAAGAATGAGTTGTATGAGTGGCCTAGCACAGATCCATCTCCATCAGCTTTCGTAACCACCTGCACCAATATCAAAACCAATCTTAATGACTGGCACTCAAGGCTAGGCCATCCCTCTCATCATATCCTCAAAACAATCATCAATCAAAACTCTCTTCTTATTTCTGATTCTTTGTCCAATTCTTTTTCGTGCATTGATTGCCTATTAAATAAAAGTCACAAACTCTCTTTTTCTTAAACCACAATCTCATCTACAAAACCTCTTCAATACTTATTTTCTGATGTCTGGACATCGCCTATTCTCTCTATCGATAATTTCAAATATTACTTGATTATTGTTGATCATTTTTCCAGATATGTATGGCTCTATCTACTCAAACTAAAATCCCAAGTCAAAGACATTTTCTCCAAATTTACAGCCCTCGTTGAAAATAAATTCCAGACAAAAATCGGTACCTTGTTCTCCGATAATGGTGGTGAATTCATCGCTCTTCGTGAGTTCCTGGCGTCAAAAGGCATTACCCATCTCACCTCACCTCCTCACACACCCAAACACAATGGGCTGGCTGAGAGACGACATCGACACATTGTCGAAACAGGACTCACTCTCCTCACCAAAGCCTCCATTCCAAATACCTACTGGACATATGCATTCGCAGCTGTCGTATACCTCATTAACCGAATGTCCAACCAAACATTATCTCTTCAAACACCGTATACCAAACCCTTCCTAAATTCCCCAAACTACTCAAAACTCAAAATCTTTGGCTGCCTTTGCTTCCCTTGGCTTCGACCATATACCTCCCACAAATTACAACCTCGATCAACACCATGTGTCTTCCTTGGGTATTCCATCACTCAAAGCGTCTATCTCTGTTTAGACCCACGGACAAATCGTGTATACACGTCCAGACATGTTCGCTTCAATGAATCTCAATTCCCATTCACCTCTCTT

ID:

Thla_scaffold10_LTR-Copia_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1655

Start:

283884  

End:

285538

Strand:

+

>Thla_scaffold10_LTR-Copia_26

ACAACCATCAAAGCCCAGAAAACCACGACCACCACGACCACCCCCCACCGTCATCACCAGATCCAAAAACGCCATCATCAAACCAAACCCCAAATACGCTAACCTCACCAGTACCGCTGCCGCCATTAAAACAGAACCACAAACACTTGCCCAAGCCCTCAAATCCGAATAATGGCGCGGAGCAATGTCCACAGAGTTTGACTCTTAACTCCGACATCGCACCTGGAACTTGGTACCTCCCTCGCCAAAATACGACATCGTTGGATGTAAATGGATTTTTCGAATCAAACAACTCCCTGACGGAAGCCTCGACAAATACAAGGCCAGGCTTGTCGCTAGAGGATTCAATCAGCAACCCGGCATAGATTATCAAGAAACTTTCAGCCTCGTGATCAAATCCACTACGATTCGGTCTGTTCTTCGAGACTGGCCCTTGCGACAAATCGATGTCAACAACGCCTTCTTGCAGGGTTCTCTTAATGAGGATGTCTATGTTCATCAACCCCCCGGTTTTGTCAATCCAGACAAACCACTGCACGTTTGTAAGCTGAATAAAGCCTTATACAGCCTCAAGAAAGCGCCTCGAGCATGGTACTTGGAGATCAAAAAGTATTTGATGGCTTTTGGGTTCAAGAATTTAGTCTCCGACACATCACTGTTAGTACTCAATCGAGGTACCATGCTTATCTATCTGCTCATTTATGTGGACGACATAATCGTAACTGGTAATGACACTGTCGCTGTTGAAACAATATTGGCCAATCTAGCTACTCGCTTTTCAGTGAAAGATATGGGAGCTCTTTCATATTTTCTGGGAATTGAAGTAACTCGAACCTCTCGTGAAATTCATCTCAATCAGCGAAAGTATATTCATGATCTTCTCAAAACGATGCAGATGATGGAAGCGAAGCCCGTCACAACTCCAATGGCAACATCACCAAAATTGGTTCTCTCTGGCGAAGCTCACTCAAACCCCACAGAGTATCAGACACTAGTTGGTAGCCTTCAGTATTTGGCCTTCACACGACCTGATATAGCGTACGCTGTCAACAAACTGTCTCAATATATGCACAAGACAACTACTGACCACTGGCAAGCAGCAAAACGAGTACTGCGCTACTTACTCGGCACAGCCACACATGGTCTTTTTATCACCCGCGACCAGAACCTCACTCTACATGCCTTCTCCGATGCAGATTGGGCTGGCGACACAGATGATATTACATCAACAAACGCCTATATTGTGTATCTGGGTGATCAAGCCATTTCCTGGAGCTCCAAGAAACAAAAGTTGCACGCTCCTCAACAGAAGCAGAATACAGGGGGCAAACACAGCCTCCGAGATAAATTGGGTACGCTCTCTCCTCTCTGAACTTGGGATTGCGGTTACCACAACACCTGTCATCTACTGTGACAATATAGGAGCCACATACTTGTCTGCCAATCCCATTTTTCATTCCAAAATGAAACATGTTGCCTTAGCATATCACTTCATCTGTGATCAAGTTCAGGCTGGCCAGCTATGTGTTGCACATGTTTCAACGAAAGATCAATTGGCGGATACACTAACAAAACCACTAAGTCGAGCTTTATTCATTATCCTCCGAAATAAGATTGGAGTTTCGCAAGCACGTCCATCTTGAGGGGGCATATTA

ID:

Thla_scaffold10_LTR-Copia_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

109

Start:

319029  

End:

319137

Strand:

+

>Thla_scaffold10_LTR-Copia_27

TGGGATGAGAGCAAGATAGTCAAAAAAGTCGTATCTTTAAAGCCTCTTGTTTTGTTCCTCTTCCCCTCTTCTTCTTCTTCTTCTTCTTCTATTCCAATCTTCATTTCTC

ID:

Thla_scaffold10_LTR-Copia_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1777

Start:

397221  

End:

398997

Strand:

-

>Thla_scaffold10_LTR-Copia_28

CGCCCCCTCAAAATGGCGGGAGTTGTCGAACGCCAATCTTGGATATAAGTTCTTGGAACCGAAGTTTGGGAAGAGCTTTTGTTAACGGATCAGCTAGTTGGTCTCTAGTGAAAACATGTGCAACCCGAAATGTCTCAGCTTGTACATTGTCTCGGATGAAATGAAAATGTAACGTCAAATGCTTCATTCGAAAATGAAACACTGGATTAGCTGCCTGGTGTGTGGCTCTGATGTTGTCACAGTAGATAACTGGAGCAGTATGAATTGCGATGCCAAGTTCAGTGAGTAGAGACGAGATCCACCGTATCTCAGATGCCGTATTAGCCACTGCTCTGTATTCTGCTTCGGTTGATGATCGAGCAACACTATTTTGTTTCTTTGACGACTAAGAGATAAGACTGCCACCCAGATATATAACATATACAATAGTGGAAACAAAATCATCTGTATCTCCAGCCCAATCCGCATCTGAGAAGCCATGAAGAGTAAGTGGCGTGTTGGGTTTGATGAGGATGCCATGGGACTGCGTTCCCACCAAGTACCAAAGAATTCGTTTAGCTGCGCTCCAATGCTCATTAATTGGTTTATGCATAAACTGTGACAGTTTATTGACTGCAAAGGCTATGTCAAGGCGAGTGAAGGAGAGATATCGAAGGCTGCCAAGTACTTGTCTATACTCCCTCGGATCCCCTAAATCATTCCCTGAGCGAATAGACATCTTCGGTGTTGGTGCCATTAGCGACGAAACTGGTTTGGCAGCGAGCATTTTCGTCTTTGTGAGCAAGTCGATGATGTACTTCTGTTGCATCAGATGAATGCCAGCTGAGGTATGTTTTGCTTTGATTCCCAAGAAGTAGTGTAATTCACCAAGGTCTTTGAGTGAAAACTGAGCTGCAAGGGAACTGATAATCTGACGAATCAGTGAGGTGATGCTCCCTGTTATAAGCATGTCATCCACATAAACCAAGACATAGACAATATGATTGCTGTGTCGTTTGATAAAGAGAGACGTGTCAGTGACCGAATTAAAAAATCCAAGATGAAGAAGAGAAGCGCAAAGCTCTTGGTACCAAGCTCGGGGCGCCTGCTTGAGACCATAAAGTGCTTTCTTTAAGCGACACATATAAGGTTGTGTGACATAGACCTCATCTGTAAGGCGCCCTTAAAGAAAGGCATTATTAACATCAGTTTGTCTAATACTCCAGTTCTTACTTACAGCAACATGAAGAACCGAGCGTACTATAGTATACTTGATTATTGGGCTAAACGTGTCCGTGAGATCGCGACCCTGTTGTTGAGTAAAGCCCCGAGCAACAAGGAGCGCCTTATACCTGTCAAGAGTGCCATCAGGGTGATATTTGAGGGTAAAGATCCACATACAGTCCATAATATTTCGATCAGCCGACGGAGGAACCAGCTCGTGAGTGCCATTTCGAATCTGAGCATTAATCTCTTCACACATCGCATTGCACCAATTTGGATCCCTCAATGCTTCAGCGACAGTCTTTGGAATTGTGGGTTTGAGGGTGGTATTGGCATATTTTGTGTTTGGTTTGAGAATCTGGTGTTTTGCACGGGTTGACATTTTGTGATCGTTGACGAGAGGCGGTGGTAATGGTGGATTCGCTGGTGGAGGTGGTGAGATTGGTGAAGGTGTTGGGCTCGGCGATGTTGATGGAGAAGAGTTGGGGGTGGTAGATGGGCTTGGGGTAAATGGGCTTGGGGTAAATGGGTTTGTGTTTAGTTGGCCTGTACTGGTGGGTGTATTTGGTGGGCT

ID:

Thla_scaffold10_LTR-Copia_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1244

Start:

399328  

End:

400571

Strand:

-

>Thla_scaffold10_LTR-Copia_29

TTCATCAAATTGTATATGGCGAGAGGTGTAGATACGACCCGTCTTTGGTTCTAAGCAGAGATATGCACTCTGAGAGAGTGAATATCCGAGAAAAATGCACAGAAGGGAGCGATTCTCGAGCTTGTTAACTGCATAGGGCCAAAGTCATGGGAAACAGAGACAGTCAAAGACCCTCAGCTTCAAGTAGTTGGGTTGTCGCTCAAATAGTTTCCGGAAAGGCGAATCATTGGCAAGGACAAGTGTGAGCATCCGATTGATCAGGTATACTGCAGCTTTGAATGCATAAGTCCAATACACTTTTGACATCGATGATTTGCTGAGGAGCGTCAGTCCTGTTTCAACAATATGTTTGTGTTTCCTCTTTGATATTCCATTGTGTTCAGGAGTACGAGGAGGAGACGTCAAGTGTGTATACCTTGAGCTGAGAGGAACGTCCGAACAGCGATGAATTCACCACCATTATCGGAGAATAAGGTGCCAATTATGTGCTTGAAACGTTTTCAACCAACGCAGCAAACCCAATGAACACCTCCCTCACTTGTGATTTCTGTTTCAGCGGATAGATCCAAGTGTAGCGTGTGTGATGATCAACAAGTACCAGATAATACTTGAAGTTGTCAATAGACATAGTTGGTGATGTCCACACGTCGCTGTATATGTATTGGAGAGGATGAGTAGAGACAATAGTTTTGGTGTGAAAGGAAAACTTATGGCTCTTATTAATAAGGCAATCAGAACAAGATAACTGTTTTTGCGATTGAGAAACAGGTAATGAGAACTTTAAGACAAGAGTTTTCAAAAGCGGGAGTGCAGGATGACCAAGTCTTGAGTGTCAGGAGCAAAGATCGGTCTTGGGTGAAAGTGAAGTGAGTATCGCTGTTGGTTTCAGCAGTTGGACAGGCCATTCGTACAACTCGTTTCTAGTCCTGCCTTGGAGCAATTGGACCCTGTTCTGAGATCCTTCACCTGAAAGTGTACAGGAAAGAATTCCACTGAAACTTGATTAAAATTGCACATTCTATATACTGATATTAAGTTCTTTGGATATCAGGGACATATAGAACTTCACGCAGAGCAAGAGATCGAGTGGGTGTAAGAAGAGAAGTGGACCCTGTTAGAGCAATTCACAAGCCAGATCCATCAGCTATCGTGACATCCTCTCCACCATGATATGGTTGGTAAAGTGCAAGATTGTTGAGGTCTGAGGTTACATGATGAGTGGCTCCAGTATCCAACAGCCAGTT

ID:

Thla_scaffold10_LTR-Copia_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

951

Start:

401876  

End:

402826

Strand:

-

>Thla_scaffold10_LTR-Copia_30

CTGCACTTGAGAACACGTACGAGCACTATGGCCGTGAACCCCACAAATCTGACATGTCCCTTGATAGCCACGAGAGGTATGCTGATTCTGTCTTGGTGTGAATTGCTGTTATTGCCAAGTCTGATTGCCTCTGTAGTTAGACCGCTGATTATTGCCTCTGTAGTTGTTATTGTTGTTTCCACGGTAAGTGATTGCATTCACCATGACAGGGATCACTGAATGAGAAGCTTCAACCGCCGATAAAAGCTTTGCTTCGTGGTTGAGTAACTTCTCATGAACCTCTGTGAGATGTGGGGAGGTGTCACGTCCCTCAATCTGATCAGCAACGTTCTTGTAATCTTCTGGTAGTCCGTCAATAATGGCTTCGATTTGATCCTCATGGTCAATCGGTTTACCAAGGAGGGCTAGCAGGTCGAAACGTGTAGTTAGCCCTTGGAAGTACTCATCAATAGTTTTAGTACCTTTCTTCCAGTTTTTAATTTGTTGCTTGACTTGTTTAACATGACCTCGGCTTAGTTTTGCATAGGTGGAGGAGAGAGTGGACCAGATCTCTGCTGCGGTGGTCGCTGTTGAAAGGAGAGGCTGGACTGTGGTGGTGATTGGACCAAGGATAGCGCTATAGAGTAGTCTGTCTTGACGCTTCCAAAGGAGAAACTCTGCATTTGGAACGACAGCACCATTTGTGGTGATTGTAAGTGGCGGTATAATGACGGATCCGTCAATATATCCTGCGAGATCATAACCATTAAGTAGAGCATGAACCTGGTGGCTCCACATTATGAAATTAGAGGATGTGAGCTTTGTCACATTGGTCATATTGACGTTAATGAGAGTGTTAGCAGCAGAAACTGCAATGGTTTCAGAAGAGGATGGTTGAGAAAGAGGTGTTTGAGATTTGTAAAAAGAGGGGAGGCAGCTAAAGTTTTAGGTATCATTAAAGCTCTGATACCA

ID:

Thla_scaffold10_LTR-Copia_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

98

Start:

462580  

End:

462677

Strand:

+

>Thla_scaffold10_LTR-Copia_31

TTTAGTTTAATAGCTCCGGTTTAGGCCTCACTGAATGTGTATATAAACCTACATTTGTATAATTATCAAATTAATGAAATGAGATTATTTCTCTAATA

ID:

Thla_scaffold10_LTR-Copia_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1904

Start:

462678  

End:

464581

Strand:

+

>Thla_scaffold10_LTR-Copia_32

TGGTATCAGAGTTAAATATCTCGTTTCATCCGTAACAACCTTCCGCTTACTCCATCAATTCATCGGAATCTCACCGATTTTTCGCTGGATTCCTCCATTTTTCTGTTATCCAAACTCCTCGGCTCCTCGCCTCTCCCCATTCTTGTGCAATTTCAACTCTCTCGCATCGTTGAGGTTGATTTTAATCTTCAATGGGAAAGCGCACTTACAAGTTGAGATATCGTCGTGCTGCAACTGACTCGCCAGGATCCACCGCGGGAATGTCTCTGATCCGTCATGGTGAAGCATCTGGACATCCTCCAGCTCGCAACACTTCTGAATTCGCCAATCGCTTCTCAAGAGGCTCTGATCGTGTGAATGTCATTGAAACTCGCTGATCTCTTTTGACTCCGTCTCGCGATCTTTTCGAGGTATCAGATTCTCCTGACAACATCCATTCACCATATCACTTGCATAGTAGTGGTCATCCTGGCTTAGTTCTAGTCTCTGAACCTCTCGACGGGAATAATTTCAGTGTTTGGCTCATAGCTATGACGACTAGTTTAGAGGCTAAGAACAAGCTTGGATTTCTCTATGGCTCTGTTGTTACTCCTGAAGAATCTGATCCTTACTATAGAATATGGTGTCGCTGCAATAGTATGGTCAAATCATGGTTGTTGAATAGCGTTTCTTGGAAGATCTACACGAGTATTCTCTACTTCAAGAATGCTTCGGATATCTGGAAAGATTTCCATACACGCTTTCATAAATCAAACCTTCCTCGATTGTACAAGCTGCGTCATCAGATTCACTCCTTCCGTTAAGGTAGCTTAGATCTCTCATCCTATCACACTCAGGCTCAAGCTCTTTGGGAAGAACTCTCCAGCATTCAACTCACACCACGTACTGTTGAGAATCTACTTGCTGAGAGAGAAACCAATTGTGTCATTGACTTCCACATGGGTCTCAACGATGGTTATGAGAGTATATGAAGTCGTATACTGATGAAGAAGACTCTTCCCTCTCTTTCTGAGGTTTACAATCTTCTTGATCAAGAAGACAGTCAGAAATCTGCTAGAACATCTCTCCAAAATGATCTCACATCTCCAGCATTTCAAGTGTCTCAATCACAGAATCAAGGATCTGCAATCAAAGCAGTGAGGGTCAGGCTTCACAGAAGAGAGACAGACCATACTGCACCTACTGTGGACGGGTTGGTCACGTAGTTGATAAATGCTACAAGAAACATGGTTATCCTACGAGTTCCAAGCTAAATCAGAGATCTGATAGGTCTTCTTCTGTTGCTGCCAACGTTGTTGCTGATAATCCGGACAGTGATGCGTCAGTTGATGATTTGTCTCCATCTCAGCTACAGCAACTAGTCTCCTTCCTCAGCAGCAAACTTCAGCCTCCATGCTCCACTCCCACACCCGAAGTCCACTATGTCTCTGCATCTTCCGAACCTCTTTCATCAGCTGTTTGCCCAATATCCGGTACATTTTACCCCTCTATCCACTGTTCTTTTACCGGTATTGATAGACCATATGTCTGTTCTCTCAATGGCAACCTTACTACCATTAACGCTTGGGTGATAGATTCAGGAGCTACTAATCACATTTCTCACGAAAAATCTTATTTCACCTCTTTCAAACCTCTTCTAGACACCACTGTTAATCTTCCTAATGGGATTCTTGTGAGCATTGTTGGAATAGGATCTATTACTCTGGGTAGATATCTCTTACTTCACGATGTCCTGTATATCCCTCAATTAAAGTTCAATCTTCTTAGTGTAAGCTCTTTGACTAAAAGCATAGATTGTCGGGTTTGGTTTGACAGATCTGTTTGTGGTATTCAGGATCGTACACGGGAATTAACGATTGGAATGGGTAGACAGGTTGCTAATCTATACTTCTTGGACATTGAGT

ID:

Thla_scaffold10_LTR-Copia_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1689

Start:

464600  

End:

466288

Strand:

+

>Thla_scaffold10_LTR-Copia_33

AACAACTTGCTTATCTTCAAGACTACTACTGTCATTCAATAGGATCTTCAACCATTCATGAAATTTTCAGTTTCTTTCATATGATCAGATTTCTCCTCTTTATATTTCATTCTTAGTTTCCATAGACAAAGAAAAAGAACCCCAAACCTATGCAGAGGCAAAGCAGATTTGGTGTGGTGTGGGGCTATGGACAATGAGGTGGATGCTTTGGAGGAGACTGACACATGGACCATTTGCACTTTGCCCCCGAACAAGACTCCTATCGGTTGTAAATGGGTATTCAAAGTGAAGTTCAATGCTGATGAAGCTGTTGAACGCTACAAAGCTCGCTTAGTTGCCAAAGGTTATACGCAACAAGAGGGGATCGATTACAACGAGACCTTCTCTCCAGTGGTTAAACTCACTACGGTTAAGTTGGTTCTCAGTCTATCTGTTATTCAAGGGTTTTCACTTACACAGCTCGACATCTCGAATGCCTTCCTCGATGGAGACCTTGATAAAGAGATTTACATATGTCTCCCTCCAGGATATGCTACTCATAAGGGGGACAAGCTCCCACCTAATATTGTGTGTAAGTTGAACAAGTCCTTGTATGGCCTGAAATAAGCCTCTCGCCAATGGTTCTTGAAGTCTCGAGCACTCTTATCACCTTAGGGTTTACACAGACTCATTCAGATCACACGTGTTTCCTCAAGCTCAGTGATACTCTCTTCTTCTGTGTCTTGGTCTATGTTGATGATATCATCATTGCTAGCAACAATGATTCGGAGGTAGACACGCTTAAATCTCAACTCAAGTTTTTCTTTAAACTTCGAGACCTTGGTCCCTTGAAGTATTTTCTTGGCTTGGAGATTGCTCGCTCTGCAGATGGGATTCACATTTGTCAGCGTAAGTATGCTCTTGACTTAATTGATGAAACTGGCTTACTTGGCTGAAAACCCTTGAGTATTACCATGGATCCAGCAGTGAAATTCTCTAAAGACAGTGGTGGTGACCTTGTTGACGCTGAAGCTTATCGCCGGCTTATTGGTCGTCTGATGTACTTACAGATTACGAGACCAGACATCACTTTTGCTGTCAATAAGCTTAGCCAATTCTCTCAGGCTCCTCGCAAGACACATCAACATGCGGTTTACAAGATCCTTCATTATATCAAAGGCACAATCGGTCAAGGACTCTTCTATTCCGCTAAAGCAGAGCTTCAACTTCAAATGTTTGTTGATGCTGATTGGGTTTCATGTCAAGACACGCGACGGTCTACATCTGGCTACTGCTTGTTCTTAGGTACTTCTCTAATTTCCTGGAAGTCTAAGAAACAACAAGTAGTTTCCAAAAGCTCTGCGGAAGCTGAGTATCGCAGTCTCTCCTTTGCTACTGATGAGTTGGTTTGGCTGACAACTTCTTCAAAGAACTACAGATTCCTCTCGCTAAACCAACCTTACTCTTCTGCGATAACACAGCTGCCATTCACATTGCTAATAATCCCGTTTTTCACGAGAGAACAAAACACATTGAGAACGATTGTCATAGTGTTCGTGAGAGACTTCTTGCAGGATTATTCAAGCTTCTGCATGTTTGTTCTCATCTGCAGTTAGCTGATCCGTTCACCAAACCACTCTATCCTGCACATTTCCAGCAGTTAGTAGGCAAGATGGGTCTTCTGAATATCTTCGTCCTATTTTGATGGGG

ID:

Thla_scaffold10_LTR-Copia_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4418

Start:

477110  

End:

481527

Strand:

-

>Thla_scaffold10_LTR-Copia_34

GTCTTTTCAAGATGGATGACTTTTCAGGACTCTAATCTTGCTAGTAAGGTTTGTAAACGGTACTCGAGGTAGTGGTTTGCTTAAAGCGTCTGCCAACTGATCTTTAGTCGACACATGAACAACCATGAACGAACCTGAACTTGATTGAACTTGGTTTCCGATGAAGTGATAATCCAAAGCCAGATGTTTCATCCTTGAATGAAAGACTAGATTTCCACATAAGTGTGTGGCGCAAATATTATCACAATAAATCACCGGTGGCGTAGGTAGTTGAATCCCTAACTCCAAGAGTAGCGAGCAAATCCAACGCAATTCAGATAAGGTGTTTGCAACTGACCTGTATCCGGCTTCTATGGAGGAATATGAGACTCCTTTTTGTTTCTTAGAAGACCAGGCAATCGGATTATGGCCAAGGTACACGATATAAGCATTTGTTGAGACAAAGTCATCGGCATGCCCTACCCAATCTGCATCGGAGTAAGCGTGTAGCGTCCTCGGAGAATGTCACCAACGAAGAATCCCATGATCAGCTGTTCCTGCCAAATAGCGAAGTACTCATTTGACTGCCTGCCAATGGTCATGTGTAGGCATGTGCATGAACTGAGATAGCTTGTTTACTGCACAGGAGATATCCGGTCTTGTAAATCCAAAATATTGCAAACTTCCCACTATTCTGCGATATTCAGTTGGATTTGTGAAGTTGGTGCCGTTGTGTAGAGACAATTTTGGAGAAGTTGCCATGGGAGTTGTAACTGGTTTTGCCGTCAGCATGTTATGCTTTGCCAATAAATCATTTATGTATTTATGTTTACGCAAATGTAACCCTTGCGGTCCACGTTTTGCTTCAACGCCGAGAAAGTACGAGAGCTCTTCATGGTCTTTAACTGAGAACCGAGTTGCTAATGCATCCAATGTACAATATAGAAGTGTATCATCGTTGCCTGTGAGTATGATATCGTCCACATAAATGAGCATATACACAAGAGACTGACCTGCTCGGAGAATGAATAGGGAGGTGTCTGCAACCGAATTGATGAATCCAGCAGAGAGAAGATATGTTTTTAACTCCGTGTACCATGCTCGCGGAGCCTGTTTGAGACCGTAGATGGCTTTGCGAAGGCGACAGACATAGCTCGGTCTATATTTATCAATGAACCCAGGCGGTTGTTCCATGTATACTTCCTCTGCTAGGGTGCCTTGAAGAAAAGCATTATTGACATCTAGCTGTCCAATGGTCCAGGAGCGGGTTACTGCGATGTCCAGCACAAGTCGAATTGTTGTTGCTTTAATAACGGGGCTAAAGGTTTCGTAGTAGTTGATCTTATGTTGCTGATTATATCCCTTTGCGATGAGACGTGCTTTGTAGCGATTAATAGAGCCATCTGGGTTGTACTTCTTTGTGAAGATCCATTTACAGCCCACTATCGTTGTTGATGAAAGAGGAGGAGGAACTAAATCCCAACTGTGATTTCCAGTCTGAGCATTGATTTCAGCCACCATTGCTTTGCGATACCTTTCGTCATTGAGGGCATGATTAGCTGTTCTTTCTGGATCGGAGTGGGATTGAAGAGACACCGTGTTTGTGTATGTTGGATTTGGTTTGTCAATGCCATGTTTGGCACGAGTTGACATTTTGTGATCATTGTGAGCGTTGAGATGGGGATTTTATGGAAGGGGGTTTGGAGGTTTACGAGGCTTTCGAGATTTAGTGTTTGGTGGTGGTGGAGGTGGAGGGATTGAAGAAGATGAAGTGGGATTTAGCAAAGATGGCGATGGTGAAGGGTTTGTCGATTGCGACTGTGTATGGGTGTTAGAGGGGGTTATGTTTTGTGGGCTTGGTGTTTGGGCCAAAGTTGTATTTTGAGGTGGTGGTTGCTAGGTCGTGGGTTGCGGCCCATTTTATGTTGGAGCAGTAAGCTCAGATGAGGGAGAAACAGAAGGAGTTAGAAGTAAAGAAGACGATACCTGATTCTCGGTTGCGATTGTCGGCGTCGGAGGAGACGAGTGAGGGTGAAGAACTGAGTACGGAGACGTCGGAGGGGAGACACGCGGTACCACCTAATTTGGAGGATAACTCCAGGCATTCAGTGATTCCTCTGTTTCTGTTGCACCCGATTCAATTCCCATCATTCGAAATGGGAAAACATCTTCTGCAAACACGACATGTCAAGAGACATAGAGTCTATTCGATGGTGGATGAAGACAGTTGTAGGCACTCTGGGTATTGGAGTATCCCAAAAACACACATTGGAGAGATCGATCCTCAAGCTTGTGACGATTATACGGCCGAAGCCAAGGGTAGCACGCACATCCAAACACCCGCAGTTTAGCATAATTCGGAGCAATGCCAAACAGTTTATGATAAGGCGACTGAAGTGATAGAACCGGTGTAGGAAGACGATTGATCTAATACACAGCTACCGCAAATGCATAAGGCCAGTAAACTTTCGGAACCGATGCTTTTGACATAATTGTAAAGCCAGTATCAACGATGTGTCGATGTTTCTTTTCAGAAAGCCCATTGTGTTCTGGCGTGTGTGGAGGTGACGTAAAATGTGAAATCCCGTGTTGCGTGAGGTATTTTCTCATAGCTATATACTCGCCACCATTGTCAGAATAAAATGTCCCAATCTTGGTTTGAAACTGATTTTCTACGAGGGGTTTGAAGGCTATGAAGGTAGGTTTAACTTGGGATTTTTGTTTTGAAGGATAAAGCCATGTGTATCGAGTATAATGGTCTATTAGAATAAGGTAGTATTTGTAATTGTCTGTGGATAGGATAGGGAAACTCCAAACATCGGAGAAGATATACTCCAAGGGTCGTGTAGAAACGACTGTAAAAGTAGAAAATGGTAATTTATGGTTTTTATTTTGTAAGCAATCGGAGCATGATAAAATATTTTGGGATGAATGTGAAACAGGAATTGAGAAATTTTTGACAAGGCCTTGAAGAATCTGAGAAGATGGATGACCAAATCGAGAATGCCATGAAGCCAGAGACGTTTTGAAGTTGTTGTCGTAAGCATAGCTGTTGTCCTAGAGGATGTGATAGGCTATTCATATAGCTCATTCTTTGTTTGCCCTCAGAGCAATGGGACACCCGTACTCAGATCCTTCACCTGAAAAGAGGTAGAAAAGAATTCCACGGAAACATGATTAGTGTTGCACAGCTGATATACTAAGACCAGATTCTTGGCAATATCAGGTACACAAAGAACATTATTTAATCACAAATTTCGTATTGGAGAGGGAATTGATATTAAACCCTTATGTGTGATTGGCAGGTTGGAACCATCTGCAATTAGCACATCATCTCCTCCTTGATATGGCTGATGGAGAGAGAGGTTATTGAGGTCTGAAGTGATATGGTGAGTTACTCATCTGTCTACAATCCAATTATTTGCCGAGTAAGGAGATGCTTCAACTAGATTTGCACGTGGCTGCCAAGGTGTGAATGGTGTAGTGTTGGTCTGAGAGATCGTTGCTTGAAAGGCTTGAAGCTGAGGGCAGCGTTTAACACTGTGTTCTTGAGTGCTACATATCTGACATTTCCCCAGATAAGGTTTTGACGAACGTTGATGATTAGAGGTATGATTGTTGTACTGTTAAGATGACCAATTTGATAGTTGAGGTGAGTTCCAAGTGTTGTTGTTCCTAGAGCATTGATGATTTCGATTGTTGTTGTAGGTACTCCTTTGCTGCACAGCATTGGCAGTGACAGGTGTGTGGAGAATGACATTGTCAGCTGCATTAATCAATTTCACCTCTTGATTAAGCAGTTTTTCGTGCAGTTCAACAATACTTGGTGGAGGATCTTTTCCTTCAATCTGCTCTTCTTCAGGAAGACCATCGAGGATAAGCTCAATCTGGTCTTCGTGCTCCATAGCTTTGCCGAGGATGGCAAGCTGATCAACGCAAGTGGTAATACCTTGGAGGTATACGTCAATCGTCTTGTATTCTTTCTTCCAGTTTATAAGTTGAGTCTTGAGTTGTTTAATATGACCTCTGCTAGTTTTGGCATAGGTTGATGCGAGCATCTTCCATACTTCGGATGTAGATGTGGCACGAGACACTAGTGGTTGAATGGATGGAGAGATCACTCCAATTAAAGAGCTGAAGAGAAGACGGTCTTGACGCTTCCAGAGTGTGTAAGCCGGGTTCACCGAGATCTGATCTTCAAGTGTTAATGTGGGTGTAGGAACAACAGTGGATCCATCAAGATGTCCGAATATCCATCAATCAGTGCATGAATTTGGAGGCTCCACATTAAGTAATTTGTGGATGTGAGCTTTGTTACACTTGACATGTTAACGGTAAGAAGTGTGGTGGGATTGTGAATGATTGTATCAATGATGATTGTGGGAGAGGGAGAGGTATTGTCAGAAGACATGATTCAAAGGAATGTTGTAGCGAAAGAA

ID:

Thla_scaffold10_LTR-Copia_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

272

Start:

519451  

End:

519722

Strand:

-

>Thla_scaffold10_LTR-Copia_35

TTTTTTTCTAAGTATTTTCGGGTGACTCTAACATCACATTTCCCATGTATATATCCACATACATGCGAAGTGTTTCATTGATATAGAACAAAATGTGAATATATCTTCTTGACGACCAATAAAAACAAATAAAACTCTAGATCAATTTTCTTCAAAATATCTGATCTCTTTTATGTTTAGCTTGAACACCTTGTGCCACGTTAGTATTAAACGTTTAATTATGTGTATGTTTCAGTATGTCGTTTCTTGTTCCAACAACTTATGCACTTTCA

ID:

Thla_scaffold10_LTR-Copia_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

142

Start:

532784  

End:

532925

Strand:

-

>Thla_scaffold10_LTR-Copia_36

ATATTATCGGCATTAGCTAAGACGGATGTGCCATCAAAGTGGCTGAAGACACTACTGAAACTGAGACAGTGAGTCTGAAACAACTCAAGCCAAATGTTATTATAGTTCATCTTCTGCATGCCAAGAATAATAGGTATATAAG

ID:

Thla_scaffold10_LTR-Copia_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

702

Start:

548655  

End:

549356

Strand:

-

>Thla_scaffold10_LTR-Copia_37

ATTCCCCATATGAATATAATGACATCTAAGCATACGAATTTACAGACTTTATAAACTAAAAAAGACTTAACTTAGACTAGACACTAACTTGACTAGACTAGACGTATTTTTCGAGAGTATACGAAGACTAACTGTATCTGAAATAGTAGCTTCTCAGTCTTGAACCATTCATTATCGATATCTGCCAAAATTACTCAGACAAGTGATGAATTTGATGTCTTGAACCGCCCAGTTTTTTTTAATGTAAAACTAGACAACATATATAAACCATATTCGTCTTCTTGAAGAGTTAAATTCTCTATTGTGTTCATTGCGGCCTTAAACATTACCTGGTTTATCGTGAGTGAACTTGGAGAGTATAGCCTGAAACTTCATTCTCCTAGAAACGGCTCCATTTCAAACTCACTAGGTGATTGCCATGTCCCTATCACATATATAGAAGAGATTATGTTATTCTATAGACTATGGTCTCATATCATTAAAAGTCTCAATGCTTAACCATCATTACTTACAAAACAAATCACTGTTATCATCTTAAGAATCGAGCAACTTACAGTGCATATAATAGACTTTGCTTGATTTAGCTGTCCATTTGAACCAGATTTTGGGATCTCCAGTCATATAGGTTGTATATCCATCACGGCGTTATCTGTATCCATAGGCATTAAACCTATTTTTTTGATGATTTAAGAACTTGATCTC

ID:

Thla_scaffold10_LTR-Copia_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

106

Start:

612050  

End:

612155

Strand:

-

>Thla_scaffold10_LTR-Copia_38

CAGAACACGGTGAGTATCGGTCAAATGTGACCGATACAGAGCAGTATCGATCACCAGTATCGGTCAAGTGTGACCGATACAGAGCAGTATCGATTACCAGTATCGG

ID:

Thla_scaffold10_LTR-Copia_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2396

Start:

654234  

End:

656629

Strand:

+

>Thla_scaffold10_LTR-Copia_39

TGGTATCAGAGCTCTGAATTTTTTTTTTCCATCTTTCAATCTTTCTGAACTCATTGAACGATGTCCACTACTAGTGGTACCTCGAACACCGAAACGACTACGATGGAAGTAAGGAGAACGATCTCCCCCTACGACCCGACTACCGCTGACAATCCTGGCGCCATGATTTCACATCCTCTGCTCACAGGTTAAAATTATGATGAGTGGGCGTGTGGTTTGAAGACTGCTTTGTCCTCCCGAAAGAAGTATGGATTTCTTGATGGATCCATTACTCACCCATTGATGGCTCTCCCGACTTGGAAGATTGGTGGACGATTCAAGCCCTCCTTGTATCATGGATCAAGATGACCATTGATCCTGCACTTCGTTCCAGTATCTCACACCGAGATGTTGTAAAGATCATTTGAAGAAGCGGTTCTCTGTGACAAATGGTCCTCGGATCCAACAACTCAAGGCGGAGTTAGCATGCTGCAAGCAACATGGGCTTGCCATTGAAGCCTAATACGGCAAATTGAATCGGATTTGAGACAACATGGCTCAATACAAGCCATTACGTGTCTGTCGATGTGGCAAATGTGAGTGCGATTTGGGTACTCTTCATGAACAAGATCATGAAACAGAGACAGTTCACGAGTTCCTGTTTGGACTTGATGAAAATTATCAAACTGTACGATCTACTTTGGTCTCTCGTACACCTATCCAGCCTTTGGAGGAAGTCTATAATGTGGTTCGTCAAGAAGACGATCTGAAAACGCCAGCTCGCCTTGAAGAGACACTAGAAGTTACTGCATATGCAGTTTAATCCCGCGCATGTATATAGTCATCTCGATATGATGACTCCACCAAAACTGTCTTGTGTAAGCATTGTCAGCGCCAAGACACCCCTCTGACAGCTGCTTTGCCGTCATTAGCTACCGAGAATGGTGGGGTGTACAATGCAAGGAAGAGGTCGAGATGGAGCGTCTCTTTCCTCGGTTGGTGGTCGTGGGCGCAACATCAACTACACCAATGCTGTGCGTATTCCACCGTCCTCACAACAACAACATGCCAATTATGTATTGACAAATAAAGATCGCGATGGAGTTAATGGTCTCAACGATGCTCAATGGCGTACTTTGGTGAGTCTTCTGAATGCTGGTGCTATCAATTCGTCATCCTCTTGGATACTAGATACGGGTGCTACACACCATTTGACTGGGAATCTGCATATCCTCACAGATATTAGAGAAATGGATCCTGTTTTAATCATTTTGGCTGACGGTAAAGAAAGACTTTCGGTTATAGAAGGCACCGTTGTTTTGGGTTCAAATCTGGTTTTGAAATTTGTATTTTACGTTGAAGAGCTTCAATCCGATCTGATTACTGTAAGACAGTTGATGGATGAAAACACTTGTGTGGATAATTAGCTGATCAGTTTCTTGTGGTTCAGGACCGTGTTTCGAGGATGGTGATTGGAGCGGGTAAAAGAGAATCTGGAACCTTCCGTTTCTGCAGAACAGAGTCGGTTGCTGCCATTACGACTCGGGATGAAAAAGCTTACGACTTGTGGCATCATAGGCTTGGCCATCTGTCTGCTCAAATTGTGGGTTCCTTAAAAAATGCTTTTGTTTCTGTTTCTACAAGTACCAATAAGCCGTGCGATGTTTGTTATTGTGTTAAGCAAACCCAATCTTCTTTTCCAACAAGTATTAATAAAACAACAAAAGCGTTTGAGTTGATTCATTCTAACTTGTGGGGTCCGTATCGAACTCCTACACATAGTGGTGCACGTTACTTCTTTACCATCGTTGACGACTTCTCTTGCAGTGTTTGGTTGCATTTAATTACAGACAAAACAGAGGCTCCGATTCTTCTAAAAAACTTTATTGCCATGGCTAATACGCAATTTAACTCCAAAGTGCAACGATTTCGAAGCGAAAATGGTATATAATTCATGGTTTTGTCAAAGTACTTTCGTGAACAAGGGATCCTTCACTAAACGTCCTGCTTCGGAACTCCACAACAAAACGGAAAAGCTGAGCGTAAGCATCGACACATCCTCAATGTTGCTCGCGCTTTAATGTTCCAATCAAACGTTCCAATAGAATTTTGGGGGCAGTGTATACTGACGGCAGGCTACTTAATCAACAGGACGCCAAATTCAGCAATCAATGGTCTCACTCCATATGAGGTTCTTCATAACAAGGCTCCAGAGTATGATCATCTTAGGGTCTTTGGAAGATTGTGCTACGCTCATAATATATCGCACAAAGGGGATAAGTTTCAATCTCGCAGCCGCAAATGTGTATTTCTTGGTTATCCCTATGGCAAAAAGGGATGGTGCTTGTACGATCTAGAGAAAGCAGAGTATTTCACCTCGAGGGATGTTGTCTTCTTCGAAACAGAATTTCCCTTTG

ID:

Thla_scaffold10_LTR-Copia_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1652

Start:

657042  

End:

658693

Strand:

+

>Thla_scaffold10_LTR-Copia_40

ATACCCAATTCGCAACTATGTTAGTTGCAGACGTTTCTCTCAGACACATCAGGCATACCAGGTAGCTATTTCAACAAATATTGAACCCAAATCGTTCAAAATGGCTATTCGGTTCAGTGAATGGAACACAGCAATGACCTCTGAAGTTAATGCTCTGGAGGATAATGAGACTTGGGAATTAGTCGACTTGCCTGCGGGAAAAAGAGCAATTGGCAGCATGGGTCTACAAAATCAAGTATCATTCTGATGGCACTATTGAGCAATACAAAGCTCGGCTCGTCACTCTTGGTAATCAACATATTGAAGGTGAAGATTATGGGGATACATTCGCCCCTGTAGCACGAATAGGTACAGTTCGTTTGTTCCTTAAAGTCGCTGCAGGAAATCAATAGCCGATGTCTCAGCTAGATGTACACAACGCTTTCTTACATGGTGACCTTGCAGAAGAGGTATATAAGAAACCACCACCTGGATTCCATGCTAAAGATGAACATAAATTCTGCAGATTAAAGAAGTCACTATATGGATTGAAGCAGGCTCCTCGTTGCTGGTTTGAGAAACTTACATCAGCTCTGCGCACTTATGGATTTGTACAATCATTAGCTGATTATTCTTTATTCACGTTTGACAAAGACAATGTCAAGATCAATCTCTTCATCTATGTCGATGACATGATCCTCACAGGCAACTCTGAGACAGCTCTGCAGGTATTCCAAGATTATCTATTCCCCTGTTTCAAAATGAAGGATTTGGATCCTCTCAAGTACTTTCTGGGAAATGAGGTCTCTCGAAACAAGTCGGGTTTCTATTTAAGTCAAAGAAAATACACTCTGGATATAATATCTGAAACAGGTCTGTTGGGCTCCAAACCAGCTGCCTTTCCGCTTGAGCAACATCATCAACTTGCTTTATCAACCTCTAAGTACTTAGACAATCCATCTCCTTATCGACGATTAGTTGGAAGATTCATCTATCTAAGTGCTACACGCCCTGATCTGGCATTCAATGTTCACATTTTGGCTCAGTTTATGCAAGAACCTCGCGAGGATCATTGGCACTCTGCATTACGTGTTGTCCGTTATTTAAAAGGGTCCCCGGGCCAAGGTATTCTCTTGGATTCTGATAGCACATTCCGGGTCTCTAGTTGGTGCGATGCTGATTGGGCTAGTTGTCCCATTACTCGGCGATCTGTCACAGGCTATTTTGTTCAACTCGGCAACTCTCCGATTTCCTGGAAGACCAAGAAGCAACGCACTGTCAGCAAATCTTCAGCTGAAGCAGAATATCGAGCCTGTCCTATCTCAAAGATGAGCTGGTCTCTATAAAGAGTGTTCTTCAGTCACTTGGTGTCGTTCATGCTCAGCCAATGGGAATGTATTGTGATAGCAAGTCCGCGATTCATATCAGCACAAATCATGTCTTCCATGAGCGCACAAAACATGTCGAAATAGACTGTCATTCTGTTCGTGAACAAATTCAGAATGGTACTATATCAACGCATCATGTCTCTACTACTCAGCAACTTGTCGACATTTTCACTAAACCGTTGGGTCGGCAATCGTTTGAAGACTTCCGGATCAAGCTCGGCACTCTGGACCTCCATGCTCCAGCTTGAGGAAGAGTATTAGGATACGATATGATAAGATCCAATC