TBGR-Browse-Rsa-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
R6_snRNA_21	Retrotransposons	Ret_other	snRNA	205	15223990	15224194	-
R7_snRNA_22	Retrotransposons	Ret_other	snRNA	210	16153340	16153549	-
R8_snRNA_23	Retrotransposons	Ret_other	snRNA	156	12314388	12314543	+
R8_snRNA_24	Retrotransposons	Ret_other	snRNA	178	13332725	13332902	-
R8_snRNA_25	Retrotransposons	Ret_other	snRNA	190	13346769	13346958	-
R8_snRNA_26	Retrotransposons	Ret_other	snRNA	178	13419376	13419553	-
R8_snRNA_27	Retrotransposons	Ret_other	snRNA	178	13431017	13431194	-
R8_snRNA_28	Retrotransposons	Ret_other	snRNA	190	13444263	13444452	-
R9_snRNA_29	Retrotransposons	Ret_other	snRNA	162	29383476	29383637	+
R9_snRNA_30	Retrotransposons	Ret_other	snRNA	185	29384765	29384949	+
R9_snRNA_31	Retrotransposons	Ret_other	snRNA	179	30401955	30402133	+
R9_snRNA_32	Retrotransposons	Ret_other	snRNA	179	30404796	30404974	+
RUS02039_snRNA_33	Retrotransposons	Ret_other	snRNA	168	3534	3701	-
RUS02039_snRNA_34	Retrotransposons	Ret_other	snRNA	190	5157	5346	-
RUS05570_snRNA_35	Retrotransposons	Ret_other	snRNA	205	1381	1585	+
RUS08385_snRNA_36	Retrotransposons	Ret_other	snRNA	135	4	138	+
RUS09507_snRNA_37	Retrotransposons	Ret_other	snRNA	132	1	132	-
RUS09507_snRNA_38	Retrotransposons	Ret_other	snRNA	100	1648	1747	-

Raphanus sativus (v1.0)

ID:

R6_snRNA_21

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

205

Start:

15223990

End:

15224194

Strand:

-

>R6_snRNA_21

CAAAAAATAATTTAAACTGTTAATGGATAGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACGCAGGCTTTCCCACTTGGGGAGACCTTAAGCAGCGCCCTCTCCTTGTATCCTCTCCTTTGTGCAATGGAGAGAGATCACTAGCCTAGGCCACTCATATTTTTGATAATGAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R7_snRNA_22

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

210

Start:

16153340

End:

16153549

Strand:

-

>R7_snRNA_22

AGTTGGTAGGGACCGCGCGAACGCAGGCCCCCTCTCCCACAAATAATGACGCAGGCTCTTCCTCATGGGAAGACCTTAGGCTAAGCACCCCTCCGCAGTGCAATGGAGGTCACTAGCCTAGGCCACTCGTCTTTTTGATCACGAGTTGACCCCGTCCAGGTAAGTACTTAACTTGTTGCGCCAAGGCCTCGCTTTATACCCTCCCTCCCC

Raphanus sativus (v1.0)

ID:

R8_snRNA_23

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

156

Start:

12314388

End:

12314543

Strand:

+

>R8_snRNA_23

ATTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACTAAGGAAGGGTGCTTAGCCTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGGGGGTTTGCGTTCGCGCAGCCTCT

Raphanus sativus (v1.0)

ID:

R8_snRNA_24

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

178

Start:

13332725

End:

13332902

Strand:

-

>R8_snRNA_24

AGAATTGGGAGAGGCCGCGCGAACGCAGGCCTCCACTGCCACAAATAATGACGCAGGCTCTTCCACTTGGGAAGACCTTAAGCTAAGCACCCTTCCGTTATGTGCAATGGAAGTCACTAAGCTTAGGCCACTCTTCTTCATGATCAAGAGTCGACCCCGTCCAGGTAAGTGATTTGCA

Raphanus sativus (v1.0)

ID:

R8_snRNA_25

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

190

Start:

13346769

End:

13346958

Strand:

-

>R8_snRNA_25

CCAAATATTGAACTTGAAATTTGGGAGAAGCCGCGCGAACGCAGGCCTCCGCTGCCATAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAAGCTAAGCACCCTTCCGTTATGTGCAATGGAAGTCACTAGCTTAGGCCACTCTTCTTCATGATCAAGAGTCGACCCCGTCCAGGTAAGTATCTT

Raphanus sativus (v1.0)

ID:

R8_snRNA_26

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

178

Start:

13419376

End:

13419553

Strand:

-

>R8_snRNA_26

AGAATTGGGAGAGGCCGCGCGAACGCAGGCCTCCACTGCCACAAATAATGACGCAGGCTCTTCCACTTGGGAAGACCTTAAGCTAAGCACCCTTCCGTTATGTGCAATGGAAGTCACTAAGCTTAGGCCACTCTTCTTCATGATCAAGAGTCGACCCCGTCCAGGTAAGTGATTTGCA

Raphanus sativus (v1.0)

ID:

R8_snRNA_27

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

178

Start:

13431017

End:

13431194

Strand:

-

>R8_snRNA_27

AGAATTGGGAGAGGCCGCGCGAACGCAGGCCTCCACTGCCACAAATAATGACGCAGGCTCTTCCACTTGGGAAGACCTTAAGCTAAGCACCCTTCCGTTATGTGCAATGGAAGTCACTAAGCTTAGGCCACTCTTCTTCATGATCAAGAGTCGACCCCGTCCAGGTAAGTGATTTGCA

Raphanus sativus (v1.0)

ID:

R8_snRNA_28

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

190

Start:

13444263

End:

13444452

Strand:

-

>R8_snRNA_28

CCAAATATTGAACTTGAAATTTGGGAGAAGCCGCGCGAACGCAGGCCTCCGCTGCCATAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAAGCTAAGCACCCTTCCGTTATGTGCAATGGAAGTCACTAGCTTAGGCCACTCTTCTTCATGATCAAGAGTCGACCCCGTCCAGGTAAGTATCTT

Raphanus sativus (v1.0)

ID:

R9_snRNA_29

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

29383476

End:

29383637

Strand:

+

>R9_snRNA_29

ACTTACCTGGACGGGGTCGACTCATGATCAAGAAGATGAGTGGCCTAGGCTAGTGATCTCCATTGCACTCAGGAGAGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAACCTGCGTTCGCGCGGCTCCCACCA

Raphanus sativus (v1.0)

ID:

R9_snRNA_30

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

185

Start:

29384765

End:

29384949

Strand:

+

>R9_snRNA_30

ACTTACCTGGACGGGGTCAACTCTTGATCAAAAAGATGAGTGGCCTAGGCTAGTGACTTCCATTGCACATAGAGGAAGGGTGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGGTGCCAGCGTTCGTGCGGTCCCTACCATTCATATGAATCTAAATTCT

Raphanus sativus (v1.0)

ID:

R9_snRNA_31

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

179

Start:

30401955

End:

30402133

Strand:

+

>R9_snRNA_31

ACTTACCTGGACGAGGTCAACTCATGATCAAAAAGATCAGTGGCCTAGGCTTAGTGATCTCTCCATTGCACAAAGGAGAGGATAAAAGGGGAGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTACGTCATTATTTGTGGCAGAGGGGTGCCTGCGTTCGCGCGGTCCCCACCA

Raphanus sativus (v1.0)

ID:

R9_snRNA_32

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

179

Start:

30404796

End:

30404974

Strand:

+

>R9_snRNA_32

ACTTACCTGGACGGGGTCAACTCATGATCAAAAAGATCAGTGGCCTAGGCTTAGTGATCTCTCCATTGCACAAGGAGAGGATACAAAGGAGAGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGGTGCTTGCGTTCGCGCAGACCCCACCA

Raphanus sativus (v1.0)

ID:

RUS02039_snRNA_33

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

168

Start:

3534

End:

3701

Strand:

-

>RUS02039_snRNA_33

TAAGGATGGTAGGAGCCGGGCGGACGCAGATTCCCTCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACTTTAAGCTAAGCACCCCTCCTTAGTGCAATGGAGGTCACGAGCCTAGGCCACTCGTCTTCTTGATCACTAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

RUS02039_snRNA_34

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

190

Start:

5157

End:

5346

Strand:

-

>RUS02039_snRNA_34

AAGAATGGATGGTAGGAGCCGCGCGAACGCACGCTCCCTCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAGGCTAAGCGCCCTCTCCTTTGTATCCTCTCCTTTGTGCAATGGAGAGAGATCACTAGCCTAGGCCACTCATATTTTTGATAATGAGTTGACCCCGCCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

RUS05570_snRNA_35

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

205

Start:

1381

End:

1585

Strand:

+

>RUS05570_snRNA_35

ACTTACCTGGACGAGGTCAACTCATTATCAAAAATATGAGTGGCCTAGGCTAGTGATCTCTCTCCATTGCACAAAAGAGAGGATACAAGGAGAGGGCGCTGCTTAAGGTCTCTCCAAGTGAGAGAGCCTGCGTCATTATTTGTGGCACAGGGAGCCTGTGTTCGCGCGGCTCCTACCATCCATTAACAGTTTAAATTATTTTTTG

Raphanus sativus (v1.0)

ID:

RUS08385_snRNA_36

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

135

Start:

4

End:

138

Strand:

+

>RUS08385_snRNA_36

GTGGCCTAGGCTAGTGACCTTCATTGCACTGAGGAGGGGCGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCATTCAATTTTAAA

Raphanus sativus (v1.0)

ID:

RUS09507_snRNA_37

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

132

Start:

1

End:

132

Strand:

-

>RUS09507_snRNA_37

TGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAAAGCTAAGCACCCCTCCTTAGTGCAATGGAGGTCACTAGCCTAGGCCACTCGCCTTCTTGATTACGTGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

RUS09507_snRNA_38

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

100

Start:

1648

End:

1747

Strand:

-

>RUS09507_snRNA_38

AAGAATGGATGGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACGCAGGCTCTCTCACTTGGGGAGACCTTAGGCTAACGCCCTCTCC