ID Class Order Superfamily Length Start End Strand View
R8_LTR-Ngaro_21 RetrotransposonsLTRLTR-Ngaro2052889067028890874-
R9_LTR-Ngaro_22 RetrotransposonsLTRLTR-Ngaro16049601024960261+
R9_LTR-Ngaro_23 RetrotransposonsLTRLTR-Ngaro16050138455014004+
R9_LTR-Ngaro_24 RetrotransposonsLTRLTR-Ngaro1202492438724924506-
RUS00028_LTR-Ngaro_25 RetrotransposonsLTRLTR-Ngaro91110275110365-
RUS00247_LTR-Ngaro_26 RetrotransposonsLTRLTR-Ngaro1919437394563-
RUS00538_LTR-Ngaro_27 RetrotransposonsLTRLTR-Ngaro2204068440903+
RUS03777_LTR-Ngaro_28 RetrotransposonsLTRLTR-Ngaro24919512199-
RUS07682_LTR-Ngaro_29 RetrotransposonsLTRLTR-Ngaro13324452577+
RUS08780_LTR-Ngaro_30 RetrotransposonsLTRLTR-Ngaro10521642268+

< 1 2 > Total 2


Raphanus sativus (v1.0)

ID:

R8_LTR-Ngaro_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

205

Start:

28890670  

End:

28890874

Strand:

-

>R8_LTR-Ngaro_21

GCGGCTGCTGCTGCTGGATAGGAGAATGTAGCAGACGGTGCTGCTGGTGATGGAACTGCTGCTGTTGAATGAACTGTTGTTGTTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGCTGTTGCTGTGGCTGGAACTGCTGCTGGGTTTGTTGTTGATGAAACTGTTGTGGCTGTTGTTGTTGTTGCTGGAGGAATAGATG

Raphanus sativus (v1.0)

ID:

R9_LTR-Ngaro_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

160

Start:

4960102  

End:

4960261

Strand:

+

>R9_LTR-Ngaro_22

CAACAGCAACTCCAGCAGCAGCAGCAACAACAGTTTCAGCAGTTAGGTCAGTCCCAGCAGCAACAGCAGTTATCTCAGTCTGAGCAGCAACAGCAGCAGCTACAACAACATGAGCTGCCTCAACAACCACAACAGCAGCAGCAGCAACAGTCAACAGCCT

Raphanus sativus (v1.0)

ID:

R9_LTR-Ngaro_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

160

Start:

5013845  

End:

5014004

Strand:

+

>R9_LTR-Ngaro_23

CAACAGCAACTCCAGCAGCAGCAGCAACAACAGTTTCAGCAGTTAGGTCAGTCCCAGCAGCAACAGCAGTTATCTCAGTCTGAGCAGCAACAGCAGCAGCTACAACAACATGAGCTGCCTCAACAACCACAACAGCAGCAGCAGCAACAGTCAACAGCCT

Raphanus sativus (v1.0)

ID:

R9_LTR-Ngaro_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

120

Start:

24924387  

End:

24924506

Strand:

-

>R9_LTR-Ngaro_24

TAGCTGCAAACTGAAGTGCTGTCGAGGTGTAGCAGTAGTAGTAGTATTAGAACTAGCAGAGGCAGAAGTAGTAGCAGTTGTGGTGGCTACTGATGGTAATAGTTGTGTCTTTGAAATCAA

Raphanus sativus (v1.0)

ID:

RUS00028_LTR-Ngaro_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

91

Start:

110275  

End:

110365

Strand:

-

>RUS00028_LTR-Ngaro_25

GCACTAACTTCAGTGAGAGAAGCAGGACTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCTCTAGTAACATAACGGAAGAGGACAATGCAGA

Raphanus sativus (v1.0)

ID:

RUS00247_LTR-Ngaro_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

191

Start:

94373  

End:

94563

Strand:

-

>RUS00247_LTR-Ngaro_26

CCTATAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTATTGAGCG

Raphanus sativus (v1.0)

ID:

RUS00538_LTR-Ngaro_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

220

Start:

40684  

End:

40903

Strand:

+

>RUS00538_LTR-Ngaro_27

AACAACAGCAGCAACAACAGATCCATCAGCAGCAGCAGCAACAACAGATCCATCAGCAGCAGCAGCAGCAACAGATCCAGCAACAACAACACCACCAACAGCAACAGCTGCCACAACTCCAGCAGCAGCAACATCAATTGTCACAACTCCAACATCATCAGCAGCAACAGCAACAGCAGCATCAGATGTCTCAGCTTCAACAACATCATCAGCAGCAGCA

Raphanus sativus (v1.0)

ID:

RUS03777_LTR-Ngaro_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

249

Start:

1951  

End:

2199

Strand:

-

>RUS03777_LTR-Ngaro_28

TCTGATTCAGCGGTGACGTCTGCTGCTGCTGCTGCTGCTGCTGGTGATGATGTTGAAACTGTGACAACTGGTGCTGTTGTTGCTGTTGCTGCTGGAGCTGTGACATTTGCTGCTGGAGTTGTGGCAGCTGTTGCTGTTGGTGGTGTTGCTGCTGCTGCTGGATCTGTTGCTGCTGCTGCTGCTGATGTTGTTGCTGCTGGATCTGTTGTTGTTGGAGTTGCTGCTGTTGCTGATTTGGAATTTGTGGCT

Raphanus sativus (v1.0)

ID:

RUS07682_LTR-Ngaro_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

133

Start:

2445  

End:

2577

Strand:

+

>RUS07682_LTR-Ngaro_29

TCGCTCAATACCAAAAGCTCACTCGCTACAAGCTCACTCGCTACAAGCTCACTCGCTACAAAATCGCTCGCTACAAGCTCACTCGCTACAAGCTCACTCGCTACAAGCTCACTCGCTACAAGCTCACTCGCTA

Raphanus sativus (v1.0)

ID:

RUS08780_LTR-Ngaro_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

105

Start:

2164  

End:

2268

Strand:

+

>RUS08780_LTR-Ngaro_30

CTTATATGTGTACATGTGTACACCTAGTATGTGTACATGTGTACATAATGTTGTACATCTTGTATGCGTACATGTGTACATGTTTATATGCGTATATGTGCACAT