ID Class Order Superfamily Length Start End Strand View
R5_LINE-Penelope_21 RetrotransposonsLINELINE-Penelope1052872816528728269+
R5_LINE-Penelope_22 RetrotransposonsLINELINE-Penelope903010322730103316+
R6_LINE-Penelope_23 RetrotransposonsLINELINE-Penelope2492162193321622181-
R6_LINE-Penelope_24 RetrotransposonsLINELINE-Penelope1233445227634452398-
R6_LINE-Penelope_25 RetrotransposonsLINELINE-Penelope1304654891646549045+
R6_LINE-Penelope_26 RetrotransposonsLINELINE-Penelope1304655384246553971+
R6_LINE-Penelope_27 RetrotransposonsLINELINE-Penelope834857580948575891+
R7_LINE-Penelope_28 RetrotransposonsLINELINE-Penelope2242077712020777343-
R7_LINE-Penelope_29 RetrotransposonsLINELINE-Penelope1612623094326231103-
R8_LINE-Penelope_30 RetrotransposonsLINELINE-Penelope1302292717822927307-
R8_LINE-Penelope_31 RetrotransposonsLINELINE-Penelope1172401262524012741-
R9_LINE-Penelope_32 RetrotransposonsLINELINE-Penelope27019196361919905+
R9_LINE-Penelope_33 RetrotransposonsLINELINE-Penelope13019201191920248+
R9_LINE-Penelope_34 RetrotransposonsLINELINE-Penelope832435300024353082-
RUS00098_LINE-Penelope_35 RetrotransposonsLINELINE-Penelope1178016080276-
RUS00364_LINE-Penelope_36 RetrotransposonsLINELINE-Penelope1755730557479-
RUS00522_LINE-Penelope_37 RetrotransposonsLINELINE-Penelope20225862787+
RUS00779_LINE-Penelope_38 RetrotransposonsLINELINE-Penelope1151455514669-
RUS01047_LINE-Penelope_39 RetrotransposonsLINELINE-Penelope2331753417766+
RUS02459_LINE-Penelope_40 RetrotransposonsLINELINE-Penelope1161499615111+

< 1 2 3 > Total 3


Raphanus sativus (v1.0)

ID:

R5_LINE-Penelope_21

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

105

Start:

28728165  

End:

28728269

Strand:

+

>R5_LINE-Penelope_21

ATATGTATTGTATATGCATGTATATATTATATATATATAAGTATTTGTGGAATCCATAATTTTTAGTGTTATATATGTATGTATATATCATATATGTATAAATAT

Raphanus sativus (v1.0)

ID:

R5_LINE-Penelope_22

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

90

Start:

30103227  

End:

30103316

Strand:

+

>R5_LINE-Penelope_22

CTGCATATGCATACGTATGCATGCAGTCATGTGTATACACATTTATTTATAAAAATAAGGGAAGTGGATACACATGTATGAATGTACACG

Raphanus sativus (v1.0)

ID:

R6_LINE-Penelope_23

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

249

Start:

21621933  

End:

21622181

Strand:

-

>R6_LINE-Penelope_23

AATATATATAGAACTATATATATATACATATAAAGGCCTAAACATATACATACACATACGTACATATATATAGGCCTTTATATACATATATAAACCTAAATATATATACACCTATATAGACCTAAATTTAAATGCACACATATAGAGCTAAATATATATACATACTATAGAGCTAAATATACGTACATATATATATACAATATATATATATACAAAAAAATTCTACAAATTTATACTCAATAAATTAGT

Raphanus sativus (v1.0)

ID:

R6_LINE-Penelope_24

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

123

Start:

34452276  

End:

34452398

Strand:

-

>R6_LINE-Penelope_24

ATATACACATGTATACAAGTAAACATGTACACATACACACAAATAATCATGTATATATATACACAAGTAAACATATAAACATATAATCTTTGTACACATGTACACTTTTATATATGCACACAT

Raphanus sativus (v1.0)

ID:

R6_LINE-Penelope_25

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

130

Start:

46548916  

End:

46549045

Strand:

+

>R6_LINE-Penelope_25

TGTACATGTGTACACATCCACTTTGTATACATATGTACATTAATTTTATACATGTGCATTTTATCTATGTAGTGTACATTTGTACACATGCATTTTATCTATGTAGTGTACATGTGTTCCTATATATATG

Raphanus sativus (v1.0)

ID:

R6_LINE-Penelope_26

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

130

Start:

46553842  

End:

46553971

Strand:

+

>R6_LINE-Penelope_26

TGTACATGTGTACACATCCACTTTGTATACATATGTACATTAATTTTATACATGTGCATTTTATCTATGTAGTGTACATTTGTACACATGCATTTTATCTATGTAGTGTACATGTGTTCCTATATATATG

Raphanus sativus (v1.0)

ID:

R6_LINE-Penelope_27

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

83

Start:

48575809  

End:

48575891

Strand:

+

>R6_LINE-Penelope_27

ACATATGTACATGTGTACATCTAGTATGCGTACATGTGTATATGTTTATATGTGTACATTTTCACTTGTGTACATCAATATAT

Raphanus sativus (v1.0)

ID:

R7_LINE-Penelope_28

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

224

Start:

20777120  

End:

20777343

Strand:

-

>R7_LINE-Penelope_28

ATATGTATACATAAATAATATATAATATTATACATAACCACAATTGTACACATATACATAATTACGTATGTACATATATACACATGTACATAATTACGTATGTACATATATACACATGTACATAACTACATATGTACATATGTACACATGTACATAACTACGTATGTACATATGTACACATGTACACTAACGAATGTACACATGTACACTAACGAATATACACA

Raphanus sativus (v1.0)

ID:

R7_LINE-Penelope_29

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

161

Start:

26230943  

End:

26231103

Strand:

-

>R7_LINE-Penelope_29

ATGTACAAATACATAAGGTGTACATATACATAAGTATACATAAGGTGTACAAATACATAAAATGTATGAATACCAACATAACCCATCGAATACTTAAGGTGTACGAATACACAAGTATATATATACATAAGTATACATATATTTAAGGTATACGAATACAT

Raphanus sativus (v1.0)

ID:

R8_LINE-Penelope_30

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

130

Start:

22927178  

End:

22927307

Strand:

-

>R8_LINE-Penelope_30

CATATATATACGAACACATGTATACTACATAGATAAAATGCATGTGTACAAATGTACACTACATAGATAAAATGCACATGTATAAAATTAATGTACATATGTATACAAAGTGGATGTGTACACATGTACA

Raphanus sativus (v1.0)

ID:

R8_LINE-Penelope_31

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

117

Start:

24012625  

End:

24012741

Strand:

-

>R8_LINE-Penelope_31

CATATATATACGAACACATGTACACTACATAGATAAAATGCATTTGTACACATGTACACTACATAGATAAAATGCACATGTATAAGAAAATGTGTACACATGTACATCCGAAAGATA

Raphanus sativus (v1.0)

ID:

R9_LINE-Penelope_32

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

270

Start:

1919636  

End:

1919905

Strand:

+

>R9_LINE-Penelope_32

TGTACATGTTTACTTGTTGTCATGTGTACATTTTACTTGTGTACATATGTACATGTTTTTTATGTATATATGTACATGTTTACTTGTATATATGTGTATATATTTACTTGTGTACATGTGTACATGTTTACTTGTATATATGTGTACGTATTTACTTGTTTTCATGTGTACATGTTTACTTGTGTATATGTGTGTACATGTTTATTTATGTATATATGTACATGTTTACTTGTATATATGTGTACATATTTATTTGTGTACATGTGTATA

Raphanus sativus (v1.0)

ID:

R9_LINE-Penelope_33

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

130

Start:

1920119  

End:

1920248

Strand:

+

>R9_LINE-Penelope_33

TGTACACATTTACACATGTAAATGTTTACTTATTTTCATGTGTACATGTTTACTTGTGTACATGTTTATGTATATATGTATATGTTTACTTGTGTATATGTATACATATTTATTTGTATACATGTGTATA

Raphanus sativus (v1.0)

ID:

R9_LINE-Penelope_34

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

83

Start:

24353000  

End:

24353082

Strand:

-

>R9_LINE-Penelope_34

AAAAGAATGTATAAGTATATGTATACATATATGCATTTTTACATATTTCATATTGCAAGTAAGCATACATGTATATATATACA

Raphanus sativus (v1.0)

ID:

RUS00098_LINE-Penelope_35

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

117

Start:

80160  

End:

80276

Strand:

-

>RUS00098_LINE-Penelope_35

CATATATATACGAACACATGTATACTACATAGATAAAATGCATGTGTACACATGTACACTACATAGATAAAATGCACATGTATAATAAGATGTGTACACATGTACATCCGAAAGATA

Raphanus sativus (v1.0)

ID:

RUS00364_LINE-Penelope_36

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

175

Start:

57305  

End:

57479

Strand:

-

>RUS00364_LINE-Penelope_36

TAGACATATATGTACGTAATCATAAAATATGTTTTACTAATATATTGATGTACACAAGTGAAAATGTGCACATATGCATATATAAATATGTACACATGTACGCATACAAGATGTACAACATTATGTACACATGTACACATACTAGGTGTACACATGTACACATATAAGATGTACA

Raphanus sativus (v1.0)

ID:

RUS00522_LINE-Penelope_37

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

202

Start:

2586  

End:

2787

Strand:

+

>RUS00522_LINE-Penelope_37

TTATGTATGTGAATATGTAAATGTGTACAAAGTCTATATGTGTACATGTTTGCTTGTTTTCATGTGTACATTTTACTTGTGTACATGTGTACATGTTTTTATGTATATATGTACATGTTTACTTGTATACATGTGTACACATTTACTTGTGTACATGTTTACTTATATATATGTGTACATATTTACTTGTGTATGTGTATAT

Raphanus sativus (v1.0)

ID:

RUS00779_LINE-Penelope_38

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

115

Start:

14555  

End:

14669

Strand:

-

>RUS00779_LINE-Penelope_38

TAATATTATATTTGCATACATAATTGTATAACCAGAGTCTAGAATACATACATGTGTGTATGTGTACATGTTTATATATGTATATGTGTACAAATGTACATGGATATATGTTTAT

Raphanus sativus (v1.0)

ID:

RUS01047_LINE-Penelope_39

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

233

Start:

17534  

End:

17766

Strand:

+

>RUS01047_LINE-Penelope_39

TACATAATGTTGCTCTACATGCATTTTAGTGTACATAATGTTGTAATGAATAGTGAAAATAGTTTAGTGTACATAATGTTATACATCTTGTATGCGTACATGTGTACATATTTATATGTGTACATAATGTTGTACATCTTGTATGCATACATGTGTACATCTTGTATGCGTACATGTGTACATGTTAATATGTGTACATAATGTTGTACATCTTGTATGCATAAATGTGTACA

Raphanus sativus (v1.0)

ID:

RUS02459_LINE-Penelope_40

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

116

Start:

14996  

End:

15111

Strand:

+

>RUS02459_LINE-Penelope_40

TATCTTTCAGATGTACATGTGTACACATCTTCTTATACATGTGCATTTTATCTATGTAGTGTACATGCACACATGCATTTTATCTATGTAGTGTACATGTGTTCGTATATATATAT