ID Class Order Superfamily Length Start End Strand View
R1_LINE-L1_81 RetrotransposonsLINELINE-L1187989705718972449+
R1_LINE-L1_82 RetrotransposonsLINELINE-L1184390426319044473-
R1_LINE-L1_83 RetrotransposonsLINELINE-L114890648349064981-
R1_LINE-L1_84 RetrotransposonsLINELINE-L155891465889147145+
R1_LINE-L1_85 RetrotransposonsLINELINE-L1292191477169150636+
R1_LINE-L1_86 RetrotransposonsLINELINE-L117191508899151059+
R1_LINE-L1_87 RetrotransposonsLINELINE-L19791515959151691+
R1_LINE-L1_88 RetrotransposonsLINELINE-L1217293763159378486+
R1_LINE-L1_89 RetrotransposonsLINELINE-L115594990479499201-
R1_LINE-L1_90 RetrotransposonsLINELINE-L1353794996539503189-
R1_LINE-L1_91 RetrotransposonsLINELINE-L167695039149504589-
R1_LINE-L1_92 RetrotransposonsLINELINE-L18495244469524529+
R1_LINE-L1_93 RetrotransposonsLINELINE-L18495419709542053+
R1_LINE-L1_94 RetrotransposonsLINELINE-L191396849539685865-
R1_LINE-L1_95 RetrotransposonsLINELINE-L148797256869726172-
R1_LINE-L1_96 RetrotransposonsLINELINE-L123297661589766389+
R1_LINE-L1_97 RetrotransposonsLINELINE-L18398228909822972-
R1_LINE-L1_98 RetrotransposonsLINELINE-L110198643679864467-
R1_LINE-L1_99 RetrotransposonsLINELINE-L110198811709881270-
R1_LINE-L1_100 RetrotransposonsLINELINE-L14021014543810145839-

< 5 6 7 8 9 > Total 875


Raphanus sativus (v1.0)

ID:

R1_LINE-L1_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1879

Start:

8970571  

End:

8972449

Strand:

+

>R1_LINE-L1_81

AGCTTATAAAGAGGAAGAAAGTTATTGGCGCCAAAGAAGCCAGATTTTATGGCTTCAATGCGGCGACCGTAACACGGGCTATTTTCATGCTACTACTCGGGGCCGACGAGCGTTGAACAAGTTCTCGGTTTTGGAAAATCAGGATGGCAGGGCAGTGTATCGGGAAGGAGACATTGTACAAGTGATCACTGAGTACTATTCCCGCATCTTCACGGCACAAATGTCTGACTCCTCTCTGGTGGTTCATGACGGGATCTCCCCGCTAGTAACCATGCAGATGAATGAGACATTAATAGCCTTTCCAAGTGCTATTGAAATCAAAGAAGCACTATTCTCGATTAACCCCGACAAGGCACCGAGACCCGACGGGTTCTCAGCGAGCTTCTATCAATCCTTTTGGGATATTTTGGGCGATGATGTTGTGTCTGATATTCAGACTTTCTTCTCCTCCAACACATTGGACCTGCGCCTAAATGAGACCCATGTAAGGCTTATCCCGAAGGTTACATGTCCGAAAAAGGTGGCCGACTATCGTCCCATTGCTCTCTGCTCCACGCACTACAAGATTATAGCGAAGTTACTGACTCGAAGGCTACAACCTCTTCTCCCAGACCTGATATCGGACCATCAGTCGGCGTTTGTTAAAGGGAGAGCCATCTCGGATAATGTTTTGATTACGCATGAGATTCTACATTATCTTCAGCATTCAGAGGCTCGAGTCATATGCAGTATGGCTATTAAGACCGATATGAGCAAGGCATACGATCGCATAGAGTGGGGTTTCTTGCGTAATGTGCTTGCGAGGTTTGGTTTCCACGAGGTGTGGATAAACTGGATCATGACATGTGTGACATCGGTGTCTTATTCATATTTGATTAATGGCGCAGCTCAAGGAATGGTCGCTCCATCTCGAGGGATCAGACAAGGCGACCCGCTCTCCCCGTACCTCTTTATACTCTGCACCGACGTTCTCTCTAGCCTTTGTAAGAAAGCCCAAGTACGGGGGGATGTAATAGGAGTAAAGGTATCTCGTAATGGATCTGCGATTAATCACCTCTTATTTGCGGATGATACTATGTTCTTTAGCAGAACAGATCCTAGGAGTTGTGCTGCTCTCATCACCATTCTCAAGAAATATGAGGAAGCTTCGGGCCAGTTCATAAATTTGGACAAATCGGCGATCACCTTCTCTGCTAAGACTCCGGGAGAAGCTAAACGACGTATCAGGGAGCAGCTTCGGATTCTAAATGAAGGCGGCCTTGGCAAATATTTGGGACTTCCGGAACATTTTGGCCGGAGGAAACGAGATATTTTTGCATCTCTGGTAGACCGTATTAGGCAGCGCTCTCACAGTTGGACATCCAGATTCCTGTCCGGTGCCGGGAAGTTAATTCTGTTGAAGTCTGTGTTAGCTGCCATGCCCACATACTCTATGACTTGCTTCAAACTCCCGCTCTCACTGTGTAAACATATTCAGTCGGTGCTCACAAGGTTCTGGTGGGACGCCTCTCCGGGAGTAAGAAAGATGTGTTGGGTATCATGGGAGAAATTGGCAAAACCAAAGAATGCGGGAGGCTTGGGTTTTAGAGAAATTGTCCAGTTTAATGATGCCTTGTTGGCTAAGCAATCGTGGAGGATTTTAAAAAATCCGAACTCCTTGCTGGCGAGGATCCTCTTAGCGAAGTATTGCGTCCACTCCCCCTTCCTGAAAGTACCAACCGCTGCAAGTGTTTCTCATGGATGGCGAGGCCTGCTAGTTGGGCGTGACCTTCTGAAGAAAGGGCTCGGTTGGTCTCTTGGGTCAGGCTCAGAGATTAAAGTTTGGAATGAGCCATGGTTGTCAACCTCGGAGCCTCTGGTACCAATGGGACCACCGACT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1843

Start:

9042631  

End:

9044473

Strand:

-

>R1_LINE-L1_82

CTATCCTATTGGAGGCGTAGGAATGCAAGAATGATCCCAGGTCTGTCTTCCCATGTCACACTGGAACAGCAAGTGATTAACAGATTCACCCTCTCCCACATAACTGGCATATATCACCACACGGAATGCCCCTAGAGAGAATGCGGTCTGCGACCGGAAGCGCATCCGACAGTACCTTCCATAAGAATGTCTTAATCTTAGGAGAAGTATGTACCTTCCAGCAGGCTGACTTGAGCGCATTAAGGAACGACATTGCCTCAGAATTAAGCATAAGATCCTTGTTCTTTTCTTTTGCCGCCAACCAGTATCCTGATATAATTGAATAATCTTTAGATATGTTGAAGTTCCAGATCCAGAAGTCTTCCCTGGTCACAACCGGTTGGTTTCTAAAAAGCACTTCAATATCCGAAGGGACGAAGACCTCCTCCAACGCCTCTCTGTTCCATCTTCTCAAGGGGAAAATCAATCAAACTTCTTACTTTAAGATTGAGATCAATTGTGCAGTTTTTAATCCAAGGCGCTCTAGGTCCATAACCATCTCTGTCATCTTCAAACCACTTATCAATCCATACATTAATCGAGTTCCCATCCCCTACCCGCTTTTGTATGCCTTTGATTAGTAAGTTTCTCCCCCACAACAGACTTCTCCATCCATACGAGGAACGATTCCATAGTTTTGTCTCCAGAAAATCAACCTCAAGAAAATACCTACTTTTCAGAAACTGAGCGAGCAAACAATGCAGTGATGTGAGAACTTTCCAGGCTTGCTTAGCAAGAAGCACCTGATTGAATGCTTCAAGATCTTTGAAACCCAGACCTCCAATATCTTTCGGCAAACAAAGCTGGTCACAAGCAATCCAATGAACCTTCATGTTATGACAGTCAGAACCCCACCAAAAGTCTGTCATTGCAGACACCATCTTATCGCAAACAGTCTTAGGAATCTTGTAACACGACATAGCATAGAGTGGTAAAGAAGAGGTTGATACTTTAATCAAGATCTCCTTACCTCCTTGGGACAGATTCCGTAAGTACCACGCATTGAGCCGTCCATAGATTTTTTCCTTCAAAAAACCAAATAGGTTCACATTGTATCCCTTTAAACATTCAGGAAGGCCAAGATATTTAGAGGTTCCTCCTTCTTTGAAAATCCCCAAAACATGACTTATGGAGTTTTTGATGTCCTGATCAACCATTCTTCCGAAGGAGATCACAGATTTCTGGACGTTGATCACTTGACCAGTCACTTCGCCGTAGGCAGTTAAAATACCCTGATGTTCACGAGCTTGCATCACTGTAGCTTTACACATGATCATGTCATCCGCGAAAAAAAGATGATGGATCGACGGACCATTCTCTGAGAACTTTAACCCATTGAGACACTCCTCCTCTTCTGCCTTATTCAACAAATGAGTTAATCCTTCAGTGCATAAAACGAAAAGGAACGGTGATAGGGGATCACCCTGTCGAATTCTCCTCTGCGGTTTAATCAGACCAAAAGGCTGATCATTAATCAGGACAGCGAAGGAGACAGACAAAACACAAGCCATGGCCAATCTCTGATCGAAGCCTAGAGCCTCTAATAGGCCTTTCAAGTAGCACCACTCTATCATGTTGTACGCTTTGGACATATCAATTTTTATAACCATAAAGTCTTTTTTACCACTTCATGACCTCCCAAAGCATGAATAGTTTCATGTGCAACCTCAATATTATCTGTGATGAATCTCTCAGCTACGAAAGCTGACTGATTGACCGATACAATCTTAGGGAGAATGGGTTGAAGTCTACTAACCATAATCTTCGGGATGATTTTATGGAGTACTAAACACAAGCTTATTGG

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

148

Start:

9064834  

End:

9064981

Strand:

-

>R1_LINE-L1_83

CCCACCCATTTAATTAGTTCTTTGTTAACCAGAAATTTAGCTGATACAATACTTCTCCATCCATGATGGGGAGTAAGAACGGATCGGTTCTAGGGGTGAGGCATTCCTGTAATACTGTCCTTTAAATACTTGAGCAAATTAACAATTA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

558

Start:

9146588  

End:

9147145

Strand:

+

>R1_LINE-L1_84

ACCTCTCTGGGATGACTTTCTGATAGGCAAATTCTTGGATGAAGCTCCTCACATAGCAAAGGTCCACTCGATAGTGAACAAGATATGGACTCTAAATGACAGGTCTCAGAAGATTGAAGTTTATGAGGTTAGTGAAACTATGATGAAGTTCCGTATCTTGAATCAAGCGGATAAGAACAGGATTTTGAGAAGGGGAATGTGGAATCTAGCTGGAGTGCCGGTGGTTATGACGAAATGGTCACCAGTGGTAGAAAAAGAGAAGCCGCCAACGCAGTCTATTCCGATGTGGGTTCATGTTAAACAAGTGCCTTTGAAGATGTTTTCATGGCAAGGATTAAGCTTTGTAACAAGTCCATTGGGGGTGCCAGCGAGATTACATCCTGAAACTGCTCAATGTTTAAATCTGGAGGTGGCAAAAGTGTTTGTAAATGTTGATTTGACGAAGGATCTCCCGAAGCAACTAAATTTCAATGTTCAAGGAGAAGATGTTCTAGTGGAATACAGTTACCCGTGGTTGCCAAAGAAGTGTTTGAAGTGCGGTAAATGGGGTCACACAGA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2921

Start:

9147716  

End:

9150636

Strand:

+

>R1_LINE-L1_85

ACGTCATTAACTATGTCAGGTTTCTTTTGGAATATTAGAGGTTTCAACAAAAAGTCTAAGCAGCTTGTAGTGAAGGATTGGATTAGAAGAAGTGGGTTTCAATTTGGGTGTTTGATTGAAACAAGAGTAAAAGAAACAAGAGTTAAAAGGATCTTGGAGGTTGTAGTTCCGGGTTGGTCTTATCTTGCAAATTATGAGCATAATAGATTGTGGAGGATATGGGTTATTTGGAGTCCGAAAGTGAGAGTTACTCCCTGTTTTCAGAGTGCTCAGTTAGTTACTGTGTCGGTTCTTATGGAGGGTATGGTTGATGAAGTTTTCTGTTCGTTTGTTTATGGGAAGAATTTGGCAGAAGAAAGAAAGGAGTTGTGGCAGGATTTGAAAGATCATCAAGACTCTCCTATTATTCAAAAAGCGCCATGGATCATTCAAGGAGATTTTAATGAGATTTTGAATATTATGGAGCATTCAGGAGGTTTGTTACAAGATAGTATGGGAATGGGTGACTTCCAAGAAACTGTCAGATATTGTTCGCTGCTTGATATGTCTTACCAGGGTCCTAGATACACTTGGTGCAACAAAAGAGATGTTGGAACAATATGCAAGAAATTGGATAGGGTACTGATGAATGAAGCTTGGATGAGATTTTTTCCTCAATCCTATTGTGTTTTTGAAGCTGGGGGATGTTCTGATCATCAGCGATGCAGAATGATTTTTCAAAAAGAGGAAATTAAGCCGAGGAAGCCTTTTAAGTTTGTTAATGCTCTGGTGGATATGGCAGATTTCTACACGCTTGTAGATGGGTTTTGGTCTGAGACAGAGCCTCTGTTCAATTCTACTTCAGCATTATTCAGATTATCAAAGAAGCTGAAAGCACTTAAGCCAATTTTGAGGAAGCTTAGTGGAGAGAAATTTGGTGATATTTTTAAGAAAACAAGTGAAGCTTATAAGAATCTTTGTTTGGCTCAAACGAGAACTTTGGAGGATCCAGGTCAGAGTAACATGGAGATTGAGTTAAGGGCTTATGATAGATGGTCGCTATTATCAAGAATTGAAGAGAAAGTGATCAGTCAGAGAGCAAAAATTCACTGGCTTGATGTGGGTGATGGGAATAATAAAAGCTATCATAGAGCTGCAAGAGTTAGAGAAGTCAGGAACTCCATTCGTGAGATTAAAAGACAGGATGGCACTACTGCTGAAAGTCAAGAAGAGATAAAAGAGGAAGCAGTCAATCATTTTTACAAATTTTTGACTCATTCTCCTGATGATTATGAAGGTGCAAGTTTGGAGGAGCTAAAAACTCTTCTCAATTATAACTGTACTGATGAGGATAGAAGTATGTTGATTGGAGAAGTGACAAGGGAGGAAGTAAAGAAGGTGTTATTCTCAATGGCTGCAGATAAATCTCCCGGGCCGGATGGGTATACCTCTGAGTTTTTCAAAGCCACTTGGTCTATTACGGGTGCAGATTTCACCATTGCTGTGCAATCTTTTTTTGAGAAGGGCTTTCTACCCAAAGGTATTAACTCAACCATCCTGGCATTAATCCCAAAGTCTACTGATGCAATTACCATGAAGGATTATAGACCCATCTCTTGCTGCAATGTGATTTATAAGGTAATTTCGAAGATTTTAGCAAACAGGATGAAAAGATTGCTTCCTCTGTTCATTTCTTTAAACCAGTCAGCTTTTGTAAAAGATAGATTGCTGATGGAAAATGTTCTTCTTGCATCTGAGTTGGTAAAGAGCTATCACAAGGATTCAGTTTCTGAGAGAAGTGCGGTCAAGATTGACATCTCAAAAGCTTTTGATTCAGTTCAGTGGGATTTCTTGTTGACGGTCTTGGCTGCGTTGAATTTTCCGGAAAAGTTCATTGTTTGGATCAAGAAATGTATTGAGCTGGCCTCTTTCTCTATTCAGGTCAATGGCGAGCTTGCTGGGTACTTTAATAGTAAGAGGGGACTTCGTCAAGGCTGTTCTTTATCTCCTTATCTTTTTGTGATCTGTATGCAAGTTCTTTCAAGACTGCTGGATAAAGCTGCTATGGAGAAAAGAATATGATATCATCCGTATTGTAAGGAGATGAGTCTGACTCATATTTGCTTTGCGGATGATGTTTTAGTATTTTCAGATGGGAAGAAGAATTCCATTGAGGGTATTTTAGCTGTGTTTAAGGAGTTTGCGAAGAAATCAGGGCTTAATATAAGTCTTGAGAAATCGACTTTATATCTGGCTGGTGTTAAAGAAGAAGATAGCGTTGCCATTCTGGAACAATTCCCTTTTGAGTATGGCTCTTTACCTGTTAGATACCTGGGTCTTCCTCTTCTCACAAAGAAGATGAATAGTCAGGATTATAGGCCGCTTATCTCGCGGATCAGAGCTCGTATATCCTCTTGGACTGCAAGGCATCTTACTTTTGCAGGAAGGCTTCAGCTTATTGGATCTGTTCTGTACAGCATCATAAACTTTTGGATGTCTGCATACAGACTTCCTAATGCGTGTATTGATGAAATTAATAGTATCTGCTCGGCTTTTCTCTGGTCTGGCCCTATTCTGTCGACACATAAAGCAAAGGTTTCTTGGAAAGATGTGTGCAAGCCTAAAGATGAGGGGGGATAGGTTTGAGAAACCTAAAGGAAGCAAATAATGTCTCTTGTTTGAAGCTCATTTGGCGCTTGATGTCAGCTAGAAAGTCTCTTTGGGTGCAATGGATTTGGAGATATCTTATAAGGAAGGGGTCTTTTTGGAGTATAAGGGAAAGTAGTTCTTTGGGTTCTTGGATGTGGAAGAAACTGTTAAAGCTAAGATCTTTGGCTTATAATTTTATTGAAGTGGAGATAAACAGTGGCGCATCTACTTCTTTTTGGCTGGATAATTGGTCTTCTTTGGGGAAGCTAATTGATCTTACTGGAGTAGGAGGA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

171

Start:

9150889  

End:

9151059

Strand:

+

>R1_LINE-L1_86

GGCATTTGGTTTCCTGAAGCAACACCAAAATTTGCTTTCATAACTTGGATTGCGATTCGCAATAGGCTGGCAACTTGTGACAGGATTCTTCGTTGGAATCCCCTAGCTTCTGATACTTGTTGGCTTTGCAAAGTGGATCAGGAGAGTAGAGATCACTTATTTTTTGCTTGT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

97

Start:

9151595  

End:

9151691

Strand:

+

>R1_LINE-L1_87

CTGTTTCTATTATTTTAGATTCGAAATTGCTGCATTTGATGTAAAAATGTTTTTTTTGTCTGAATAAAATTTAACATTCTTTCAAAAAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2172

Start:

9376315  

End:

9378486

Strand:

+

>R1_LINE-L1_88

GTTCTTCTCCTCAGGCGACTTGGATGAAAGGATAAACCAGACAAACATCTGTTTGATACCGAAGACAGGAAGACCCACATCCATGTCAGAATTCCGGTCGATCAGCTTGTGTAATGTAAGCTATAAAATCATATCCAAGGTCCTCTCTGCAAGACTTAAAAAAGTGCTTCTGAAACTTATCTCGGAGACACAATCGGCCTTTGTGGCTCGTCGACTTATCTCGGATAATATTCTTATAGCCCAAGAGATGTTCCACGCTCTACGGACAAATCCAAGCTGCCAGAGTAAATTTGTGGCGATAAAGACAGATATGAGTAAAGCGTATGATAGAGTAGAGTGGAGCTTTCTAGAGATTATGATGCATAAGATGGGATTTGACGTGAGATGGATTCAGATGATCATGAGATGCGTTTCGACAGTCTCATACCAAGTCCTAATTAATGGAGAGGCAAAAGGAAAAATTATTCCATCCCGTGGATTGCGGCAGGGTGACCCGTTGTCACCATTTTTATTTGTTCTTTGTACGGAAGTGCTTATCTCTCAGCTCAAACATGCAGAGAGAGAGAAAAAGATTTCCGGTCTGAAGATTGCGAGATCAAGCCCACCAATCTCGCATCTTCTATTCGCAGACGATAGCTTGTTCTTCTGTAGGGCAACCCAGGAAGAATGCAGTGAACTGATGCGGATCATCGACGTCTACAGCAACGCCTCAGGACAACAACTGAATAAGTCAAAATCTTCAGTTATGTTCGGTTCTAAGGTGGTAGCGTCCTCAAAATCTGACCTAAAAAGGTCAATAAACATAAGTCAAGAAGGTGGAATGGGTATGTATCTCGGACTACCAGAATCGATTTGTGGATCCAAGAAACAAGTGTTTAGCTTCGTACAGGAAAGATTAAACGACCGAACAAACTCGTGGTCAACGAAGCTTCTCTCAAAAGGGGGTAAAGAAATCCAGATCAAAGCAGTCGCTCAAGCGGTACCATCGTATGTTATGTCTTGCTATCTACTGCCGCATGGAATAACAAAAAATCTCACGAGCGCAGTTTCACGGTTCTGGTAGAGTACCAAGGAAAACAATAAAGGACTACATTGGGTGGCTTGGGACAAGATTTGTGTACCAACGGAGGAAGGGGGTTTGGGCTTTCGGAACTTCAATGACTTTAACCTTGCCCTCCTCGCAAAACAGTTATGGCGTCTACTAAAATACCCGCAGTCACTCCTTGCTAGAGTGTTGAAGGGAAGGTATTATAGACACATGAATCCCATGAATGTGAACCGATCAAATAATCCCTCGTATGGCTGGCGAAGCATAATGGCATCGAAACAGGTTCTTCAACGGGGACTAAGGAAAAGAATAGGAAACGGATATGATACAAAGGTCTGGGAGGAACCATGGCTGCCACTAACTCCAGCAAGACCACCGAATCACGCAGGAGGCACCCGAGATGAGGATATGCGAGTGCACCATCTGATCGACTTTGAACAAAAGTCCTGGAACCTGGATCTACTAGAGGAGAAGATCGCACCAGCGGATATACCACACATTACTTCGCTACGGGTAAGCAAGACAGGCCGCTATGACTGCTATAGTTGGGACTTTACAAAGTCTGGTTTATATACAGTTAAGTCATGCCATGCTGTTGCGTACGACATCCGTACGTCTCCAAAAAGCTTACTACTTTTGGAACCAAGTACGAAAGGGCTGAAGTCAGAAATATGGAAACTTAAAGCTCCTAGAAAGCTGAAACATTTTCTATGGCAAGCCACATCAGGTTATCTAGCTACAGCCCAACAACTCAAAGAACGGCACTGCTCGCAAGATAGTAGCTGTATGCGGTGTGGAACGGAGAGTGAATCAATAAATCACACCCTTTTCGAATGTCCTCCAGCACTCCAAGTTTGGGCGTTGTCTCCTGTTCCTTCTCCTCCGGGACGATTCCCGTGTACAGCACTATATGCAAATCTGGACTACCTGCTCCTACGTGCAAAGAAGCAAGGGTTAGATAGTGTAGTGATAGGCCCTGTTCCATGGATACTTTGGTATATCTGGAAGGCGAGAAACGAGAAGGTTTTCAACAATAAAGAGATCTTACCTCAGGAAATGCTACAACTGGCAATAAAAGAAGCAGAAAGTTGGTACTTAGTACAACGGATGGAAGCCTCAGAAGA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

155

Start:

9499047  

End:

9499201

Strand:

-

>R1_LINE-L1_89

TCATTCTCAAAGAGATCCTTAAGCCAAAAAGGAGCACCTGAAGCTACATAAGATTGCATATAGCCATCTTTAAGGACACTTTGAGCTATGATGAAAGCTCCTCTATTAGTTGATCTTTCTTCACTTAACAGTCTCCACCAATCTATCTTCTCCAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

3537

Start:

9499653  

End:

9503189

Strand:

-

>R1_LINE-L1_90

TCAAAAAGAATGCCATTTCTAAATTTCCACAGATACCAAACCAACCATGGTATCGCATTTCTAACCTCCTCAGGAATGTCACCGTTTTTCATCATCAACATGAGGGCATGAAAGTTAGAAAAGTGAGATACCTCATCAAATCCCTGCTCTAAATGTGGCACGTTGGCCAGAGCCCACACTTGTCTTGCAACCGTGCACTGGAAAATGATGTGGTTGATTGATTCACCTTGATATCCACAAGCTTGACACACAGGGTCCATCTTGATCCCTCTCTTCACCAGTAGCTCTCCCACCGGGATCGCATTGCTCACTGCTCTCCAAATAAAGGTTTTTATTTTCGGAGCAGTTTGAATTTTCCAAACTTCAGCTTTCAGATCATTCAAAGATGGGCGAGATTCTGCCGCTCTGATCTCCTCTCTGCGGGCGTAACTGTTGATGAACCAGTACCCCGACTTAACAGTATAGCTCCCATGTTTGTTATGCAACCAAACCCAATAATCCTCTTGATCAAAAACTGTCTTCATGGCTAGGATTCTACCAACATCCTCCTCGAAGAACAGTTCTCTGAGCTTGTCCAAACGCCAGACTTTATTATGGGAGTCTATGAGATCACTGACCTTAAGCTCAAGGTCTACAAAGATATTCTTCATCAAAGGCGCTCTTCTCCTATCTCCTTCTATCCAGCGTTCAGTCCACACTGACATCGTTGTACCATTACCCAGTTGTTTCCTCAAGCCCCGGCTCAGTAGCTCTTTCCCAAACTGGATACTCCTCCATGCGTATGAGGGTCTTGATCCGTTTTTAGCCGATAGGAAATCTCCATTCTCGAAGTATCTACTTTTGAAAACTCTTGCAAACAGAGATTCAGGGTCGTTGATGATCCTCCATGCCTGTTTGGCCAGCAGAGCCTGATTGAAGTTCTGGATGTCTTTAAACCCTAATCCACCGTGTTTTTTTGCAAGGCATAATGTTGTCCAGCTCAGCCAGTGCATTTTCCTTTTGTGCTCAAGAGAATTCCACCAAAAGTCAGCCATAGCTTTGGTGAGGTTCTCACAAGATTTCTTTGTCAACTTGAAGCATGACATTGCGTACACCGGCATTGCCATCGCAATCGCCTTGATTAAAACCTCCTTCCCTCCCAACGACAAGAGTTTAGTAAACCAGCCTGACAGTCTTTCCTTTAGCCTATCATAGATATAAGCTAGGATCTCAGTTTTGGAACCACTGAAGCACTCAGGTAGGCCTAAATACGAACCCGTACCTCCCTCTTTGTAAATCCCAGTAAAGCCTTGGATAAGAAGCTTTGTGGTTTCATCAACTTTCGCGCCAAAGGTGATTGCCGACTTCGCCACATTGATCAGTTGACCAGTCGCCTTCTCATAGACTTTGAGGATGTTCATTAGATCCTGAGCTTGAACCTCTGTTGCTCTGCATATTAGTAGACTGTCGTCCGCAAACATCATATGGTGAATCATTGGTCCGTCTGCCGATAACTGAATTCCTTGGATTTTTCCGGTATCCACAGCCCTTTGGATCAGATGTATCAGCCCTTCAGTGCACAAGACAAAGAGAAAAGGAGACAAGGGGTCTCCCTGTCTCAATCCTCTCTCCGGTTTTATCCATCCAAAAGGTTGGTCGTTGATGAGCGTTGCATACTTCACCGTGGAGACACAAAACATAATTGTATCAATCCACCGATTTTCAAAGCCAAGAGCCTCCAACAGAGCACGCAAATAACCCCATTCCACACGGTCATACGCCTTAGACATGTCGGATTTGATAGCCATGAAGTCTTTGGATATTTTGTCGTTCGTCTTTAAGGCGTGGATGATCTCGTGAGCAATTAGAATATTATCTGTGATGAGCCTCTCTTCTACAAATGCAGACTGCGTGGGGAATACTATCTTCGGCATCAATGGCTTCAACCTGGTGACCAAGATGTTGGATATGATCTTGTATAATACCGAACATAGGCTGATAGGTCTTAGATCAGACATGAGGACTGGATCATCAATCTTTGGTAGCAAGCACAGGTAGGTTAAATTCCACTCAGCAGGGAATATACCAGACGAAAAGAAATCACGCACTTCTTTCGTTACCTCTGCTCCTATTATATCCCAGTACCTCTGAAAAAAGAGGCCAGTCATCCCGTCAGGCCCAGGTGCACTTCCTGCCTTGATCGCAAATACAGCTATTTTGACCTCCTCAATACTGACTTCTCTGGCAAGCTTCTCATTCATTTCCCCCGAGACTTTTTTGGAGAATCCCTCAAACAATTCAGAGTAGTCCCCGCTGGTCGTAGACTTGAAAAGATTTGAGAAGTATTCTTTCGCAACTTCACCCTTAGCCTCTTCGTCAAAATGTTGTCTGCCCCTCTCATCCATCAACTTGATGAGTTTCTTCCTTGCTCTGTTGCTCTTCACTGATGCATGATAGAACTTGGTATTCATATCCCCTTTGACAGCCCATCTTTCTTTGCATCTCTGTTTCCAGTACAGGTCCTCCTCTTTGTATGCTTGGACTAATTCTGCTTTGAGGAAATTAATTCTCACCGTTGTTGGCACCAAAGCCGATTGTTCCAACTCCAAAGCACACTGGATTTGCTTTATCTTGTCTCTAGAATTCAGATTTTCTTTCTTTTTCCAGTTGCTGAGGGCCTTTCTGCATCTCTTGATTCTATCAGACACTTTAGTTTCGAACAGGGGATGGTTGGTCAACCAGGCTTTCTTGATCTCTTCTCTCACTCCATTTTTATGGAGAAATCTGCCATCAAATCTAAAGGATCCTCTGCGAGTAGATGAAGCCGCTAAGAGATTCACCAAAGCAGGTCTATGATCAGAGCCTCTTTTATCCATGAAGACCTGATTGGAAGCTGGGAACACTTGGAACCACCTCTTGTTACCAAAACATCTGTCTAGTTTGGATTGGATAGAGAGAGAGCCTCTGGTTCCTCCCCAAGTGAAACTGTCCCCAGAGCTTTGCAACTCCACCATCTCTCCTATCTCCAGCATGTCATTGAAGGGTTGAAAAGATATTTCACTCCTTCTCGGACCTCCAATTTTCTCGTCATTGTTTCTGATGTCGTTGAAATCACCCATCATACACCAGGGTTCTTTTCTATAGACACCAATACGCGAAATCCTCTCCCATAATTTAGGTCGGTTACCTCGAATGGGTTCACCGTAAATACATGAAACAAAGAAGCTGGAAGATCCATACTGTACATGAAAATCCAAAAGGTTCTTATTTACATACTTGAAATCTAGATACACCGAGCTCTTCCACATTAAAGCTAGGCCTCCGCTGTACCCAATAGGATTGACTGTCATGATCCTATCGTAGCCTAACCATGTCTGAAGATCCACCAAAACATCTCTGTTGTGCTTGGTTTCCATTAAAAACAAAATGTCTGGGAAATGATCTTGCTTCATCTCCCACAGTCTTGGAATCACCAGGTCCTGTGCACGGCCCAATCCCTGGCAATTCCAGCTCAGCATCGTCATTTAGATATTGGACGGTCCCTCACTTGGGACCACC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

676

Start:

9503914  

End:

9504589

Strand:

-

>R1_LINE-L1_91

TTTCAAGGTCCTCCTTTTTCTTGAGGAAGAAGGGACAATCGTCTCGCTCATGAGTAAGTCTTTGACAAGTGTAGCACCTTTTCTGAAGCCTTTCATAGTCATACCTGATCTTGATTTCCTCTCCTCCAGGAGTAGTAACAGTTTTAAACCTCCTTAGAGGTCTTGCAACATTGAACTTGACCAACACTCTAATGTAGTCCTTGACCTGCGGTTTCTCCGGGTCGAAAGCTACCTCCACCACTTGGCCTGCAAAATCTCCCAGAGCCCAGAGCGCCTTCTTGGTGTAGTGATTAACTGGTATGTTTCTCATCTGGACCCAAACCATTATGTGTTGCAGATAATCTTCAGGGGGCTTTTCAACCCATCTCTCCATCACCAAAGGCCAGAGCTTGAAAGTATGAACTCCCCTATTTAGGATATCCAGTAGGTCATGTTCATACTTGAATATGAACTGGAATCTTTCTCTTGAGAGCGCAACACCTCTGACTCTATCATAGAGTTGCCATTTCCTAGGCATATCCAGTATGAGATCAGACATCTTTTGGTAGGACGGATTAAGCAATCTTCCAACCAGACTCAGCGAGTTCCTTCCGGCCGAACAATACTCCGGCGTATCTGGTAGTAGAAACGGAACATCTTCTTCTTCCTCCAACGAGAGATCCAACAGAGCTTTATC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

84

Start:

9524446  

End:

9524529

Strand:

+

>R1_LINE-L1_92

TTTTATAGCAATTTTTTAAATAGAGTTGCATTTATTATTAAAAGGTTTTTTTATTCGAATAAATTTAACATTCATTCAAAAAAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

84

Start:

9541970  

End:

9542053

Strand:

+

>R1_LINE-L1_93

TTTTATAGCAATTTTTTAAATAGAGTTGCATTTATTATTAAAAGGTTTTTTTATTCGAATAAATTTAACATTCATTCAAAAAAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

913

Start:

9684953  

End:

9685865

Strand:

-

>R1_LINE-L1_94

GTTCCCAAACCTTTTTAGCAAACGGGCATTCAAAGAAAATGTGCTTTGCTGTTTCGAGAGCATTGCATCTTGTACAGTGTGCCTGAGCTTGAATCCCTCTTATTTGCAGGTTCTTTCCTGAAGGAAGCGCCTTTTGGACTATAAACCACATGAAGACTTTCATCTTTTGTGAGCATTCGCTACTCCAAATGTCTTTTATCCAATTGAAACCTTCCGGTGTCCTGATTTCTTGTAACTCCTTTGATGCTCTGGATACCGCATATCCTGATTTTGTTGAGTAGACTCCGGAGGTTGTTGGTTGCCAGATATGTAAGTCTTCTGCGTCTCGTGTCCCCGGCTGGATCATAAGTATCTGCTCTTTGAAAAGAGGTAAGATTTCTTCTACTCTCTTGCTATTCCACTTCATATCGTCTGTTAGCAAGTCTGATACCCTTAGATCAAGTTCCTCTTCCTGTATTGGTCCACATGGTTTGACTTGCTCTGTCAATGATATCCAAGAGTCTTGCCAGACTCTTGTTGTTTGTCCATTCCCAATAGCTCTAGCTAGGTGTCTTTTTAGGAGATTTATGCCGTGTAGTATGCTCCTCCACCCATGGGAGCAAGTTGATGGAGCCTCTGCGTTTAGAAAAGCTTGGTTATGGCAATATTTGCTTCGTAGGATTCGTGATAACAGACAGTCTGGTTTTATTAGGATCCTCCACGCTTGCTTTGTCAGTAAGGCTTGATTAAATAGCTGGATGTCCCTGAATCCTAGTCCTTCTTTATCTTTAATTTGCGTCATTTTATCCCACGAGACCCAGCATATTTTCTTCTTGTCTTCTGAATCATCCCATCAAAATCTTGTTAATACTAATTGAATGCGTTTGCATAGATTTGCAGGGAGTTCAAAGCATCACATGGCGTACGTGGGGAT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

487

Start:

9725686  

End:

9726172

Strand:

-

>R1_LINE-L1_95

ATTCCACCCTATCATATGCTTTACTCATATCCGTCTTAATCGCCATATACTTATTTTGACATGATTTATTTGTCCTCAAACCATGAAACATCTCTTGAGCAATCAGAATATTATCTGAAATCAACCTCCCTGGTACAAAAGCCGATTGTGTTTCCGATATAAGTCTTGGAAGACAAACTTTCAGCCTCTCACACAGCACCTTGGATATAATCTTGTATCCTACATTACAGAGACTGATGGGTCTCAACTCTGTCATTCTGGTAGGTCTTTCCGTTTTTGGAATCATACAAATATTGGTAAGATTCAACCTTGGATCCATGTCTCCTGTAGCTAGAAAATGATTAACCAAATCCACCAGATCATCCTTTATAATGTGCCAAGAAATCTGAAAAAATAGAGCAGTCATTCCATCCGGTCCCGGTGCCTTTTCTGGGTGCATCATAAATAAAGCTTGTTTCACCTCTTCCTCCGTTGCTACCCGGAGAAG

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

232

Start:

9766158  

End:

9766389

Strand:

+

>R1_LINE-L1_96

AAATTTCTCCACTCGAGAAACATGGCACTGTATTAGGGAGAAACACCAACTCTGCTTTTAGCATCCTGCTGTGTGGTTCAAACACGCAACCCCGAGGTACTCTTTTGTAACTTGGATGATGATGCATGGAAGATTATCAACAGGAGACCACATGAGGAGTTGGAATATAAATGTGGATGCATCCTGTATTCTGTGTCAAGATCCTTTGGAAACTGCAGTTCATTTATTCTTC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

83

Start:

9822890  

End:

9822972

Strand:

-

>R1_LINE-L1_97

TTTTCTTTTCTTTTCCGAATGAATGTAAACTTTATTCAATCAAAAGCTATGTACAACTAGTGCTTCTAGATCTAATATTGTTT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

101

Start:

9864367  

End:

9864467

Strand:

-

>R1_LINE-L1_98

CCCCAACTAATAAGCCGGTCTCGAGTGGGAAGCCGATCACTGAAGACAACCCAAGTATTAAAAGCATGTTTTGGAATACCCCCTGTAAACCACACTGTTTT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

101

Start:

9881170  

End:

9881270

Strand:

-

>R1_LINE-L1_99

CCCCAACTAATAAGCCGGTCTCGAGTGGGAAGCCGATCACTGAAGACAACCCAAGTATTAAAAGCATGTTTTGGAATACCCCCTGTAAACCACACTGTTTT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

402

Start:

10145438  

End:

10145839

Strand:

-

>R1_LINE-L1_100

TTTTATGAAAAGTTTTGGCAGTGTTCCTTAACTTTAAGATTTTTCTCCACATCCAAGACTCTTGACTTGTTTTTTCACCTAACTCCCAGAAACTCTTCTTTTTGAGCAGATTCATATGCACCTATTGTCCCTAAAGGGAAGAGGATGATAGAATTCTCCAAAGTAACTTCAGACCATTCATCAGATTGACTTCTTTTAGTGGCTTTAGACCCAATCCACCGTTGATTTTAGAATACAAACATCTTCCCTTGATACTTTCTCCCCTATACTTTTCAGCTCCGGACCCGACCACAAAAATGCAGAACATAGTTGTTCTATTTCTTTCATACATTGCCTTGGGAATCTGTCTGTTGTGGCCCAAAAGTTAACTATACTCAAAAGAACACAACAAATGAGTTGAAG