ID Class Order Superfamily Length Start End Strand View
scaffold146_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra36429620842962447+
scaffold146_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra11229624482962559+
scaffold146_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra36529625602962924+
scaffold146_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra8629629252963010+
scaffold146_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra36329630112963373+
scaffold146_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra32429747722975095+
scaffold146_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra13341743734174505-
scaffold146_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra11042875714287680+
scaffold146_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra33542877504288084+
scaffold146_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra33867941806794517+
scaffold152_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra3674596046326+
scaffold152_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra345323352323696-
scaffold152_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra109323697323805-
scaffold152_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra338323808324145-
scaffold152_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra110324146324255-
scaffold158_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra3547293673289+
scaffold158_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra1427329573436+
scaffold158_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra3637352773889+
scaffold158_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra1417389274032+
scaffold165_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra235732356732590-

< 5 6 7 8 9 > Total 33


Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

364

Start:

2962084  

End:

2962447

Strand:

+

>scaffold146_LTR-Cassandra_81

TGTAACACCCTAGTTTCAAAAAATATAATATATAGTGGTGCATACAGAGATTTAAAAGAAATAATTTGGACACCTATGTCACCAAAGTGAATTTATCTTTTTAGTCACTTATCTAGAGAAAACTTTAGAGTTAAGCATGCTTGACCTCGAGTAGTTGAAAGATATGTAACCTTTCTGGAAGTGATTCCCAGAACCGTATGAGTGGAGACAAAACACATGCAAAGATCATGTAGTAATTTGTAGGGTCAGTAAACAAGTCTTTAAAACCTCTCGGACGTAGCATACCAACTGTTTGACTGATAAGGTGGGCCCACGGGCCCATGGAGGATGTGAGACCCATTAAGGTGGCGGTCGGTACGTTATA

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

2962448  

End:

2962559

Strand:

+

>scaffold146_LTR-Cassandra_82

AGTGGTATCAGAGTCGAACCCAGACGTGTGTGGGGACAAAAGGGCTCACACCGTCCGGTTTGACGATCTTGGTGTGCAACGAGGACGTTGCGGTCTGTTAGTGGGCGTGAAT

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

2962560  

End:

2962924

Strand:

+

>scaffold146_LTR-Cassandra_83

TGTAACACCTTGATTTCAGAAAATATGGTATATAGCGGTGCATGCGGAGAGATTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCACTTGTCTAGAGAAAACTCGAGGGTTAAGCGTGCTTGATCTTGAGTAGTTGAAGGATATGTGACCCTTCAGAAGTGATTCCCGGAACCATGTGAGTGAGGACAAAACACAGAAAAATATCATGTGGTAATTTGTAGGGTGGGTAAACAAGTCTTTAAAGTCTTTTAGACGTAGCATACCGATCGTTCGACTGGTAAGGAGGGCCCACATATCCGAAAATGATGTGGGACTCATGAAGGTGGCAGTCGGTGAGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

86

Start:

2962925  

End:

2963010

Strand:

+

>scaffold146_LTR-Cassandra_84

AGTGATGGAGACAAAAGGCTCATACTGTCTGGGGTGACGATCTTGGTGCGCAACAAGGACATTGTGGTCTGTTAGTGGGGGCGAAT

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

363

Start:

2963011  

End:

2963373

Strand:

+

>scaffold146_LTR-Cassandra_85

TGTAATACCCTGGTTTCAAGAAATATAGTATATGGTGGTGCATACAAAGATGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGTACTTATCTTTTCAGTCACTTGTCTAAAAAAATGTCAAGGTTAAGTGTGCTTAACCACAAGTAGTTGAAAGATAGGTGAGTTTTCGGGAAGTGATTTCCAGAACTGTGTGAGTGAAGACAAAATGGAAAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAACCTCCTAGACATAGCATACCGATCGTTCAACTGGTAAGATAGGCCCATGAGCCCAAAGAATATATGTGGCTCATTAAGGTGGTGGTTGGAATGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

324

Start:

2974772  

End:

2975095

Strand:

+

>scaffold146_LTR-Cassandra_86

TGTAACACTCCGGTTTATGAAAAATATGATATATGGTAATACATAAAAAAATATTTAAAAAAATTGATTTGGCTATCTGTATCACTAAAGTGCATTTATTTTTTTTTGATTATTTATCTAGAAATTTTTTTAGGATTAAACATGCTTGAACTACAGTAGTTAAAGGATGAGTAATATTTTGAGAAGTAATTTTAGAACTGTGTAAGTAAAGATAAAATATGAGAAAATATCATGTGGTGATTTGTAAGGTTGGTAAACAAGTTTAAAAATTTTTTTGGACGTAATGTATCAATCGTCGGGCCGATAAAATGGGTTTATAGGCCC

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

133

Start:

4174373  

End:

4174505

Strand:

-

>scaffold146_LTR-Cassandra_87

AAATTATTCTAACTTGAACATATTTAACCTTGAAGTTTTATATGGACAAATGATAAAGAGATAAGTGTCTAAATTAATTATTTTAAATCATCTCTTCATGCACCATTATATTTCCTAGAAATAGGATGTTATA

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

4287571  

End:

4287680

Strand:

+

>scaffold146_LTR-Cassandra_88

AGTGGTATCAGAGTCGAACCCAGTCGGGTGTGGAGTCTAGATGGCTCACACCGCATGGGTGTCGAACTTTGTACACAACAAGGACATTACAGTCTATTACTGGGGTGAAT

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

335

Start:

4287750  

End:

4288084

Strand:

+

>scaffold146_LTR-Cassandra_89

TGTAACACTCCGGTTTCAGAAAACTAAAAGAATTGATTTGGCCACCTATATCACCAAAGTGCACTTATTTTTTTGGTTACTTGTCCAAAGATAACTCCATAGTTAAGTGTGTTTAAGGTGAAGTAGTTGAATGATGAGTGACCTTTTGGGAAGTGATTCCCGGAACTGTGACTGAGGACAAAACACGAAAAAGATCATGTGGTGATTTATATGGTCAGTAAATAAGTTTTTAAAATCCCCTGGATGTAGCGTACTGACAACCTGACCAGAGAAAGTGGGCCCATGGGCCGGGAAAAGATGTGAGGCCCATTATAGGTAGCGGTCAGGGCATTACA

Lepidium meyenii (v1.0)

ID:

scaffold146_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

6794180  

End:

6794517

Strand:

+

>scaffold146_LTR-Cassandra_90

TGTAATATCTCGATTACAGAAAATATAGTAGTGTATATAAAGAAATTAAAAAAATTAATTTAACTACTTATATTATTAAGATGTAATTATTTATTCAATTATTTGTTTACTGAAAAGTTCAGAATTAAATATGTTTGAATTGGAGTAGTTAAAAAATAAGTTAATTTTCAGGAAATGATGACAAAATCACGTGAATAAAAACAAAACAGAAGTGATTTATATGTTCGGTAAACAAATTTTTAAAACCAAACATAACATATCGACCGTGCAGCTAAAAAGTAGACTCATGAACTGAAAATATATATAGGGCCGACAAAAAATAACTGTGGGACATTACA

Lepidium meyenii (v1.0)

ID:

scaffold152_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

367

Start:

45960  

End:

46326

Strand:

+

>scaffold152_LTR-Cassandra_91

TGTAACTTCCCGATTTTCAAAAAATATGATATATGGTGGTGCATGCAAAGATGATTAAAAGAATTGGTTGGCCACCTATGACACAGAAGTGCACATATTATTTCAGTCACTTATCTAGAGAGAACTCCTTGGTTAAACATGATTGAGCTGGAGTAGTTGAAAGATGGGTGACCTTCCAGGAAGTGATTCTCGGAATCGTGTGAGTGAGGAAAAAATACAAGGAAAGATTATATGGTGATTTGTATGGTCGGTAAACAATTCTTTAAAGCCATCCGGACGTAGCATACCATCCGTTCGACCAGTAAGGTGTGCCCACAGGCCTATAGAGTACATGAAGCCCATTACAGTGGCAGTCGGGGGTGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold152_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

323352  

End:

323696

Strand:

-

>scaffold152_LTR-Cassandra_92

CCCGATCGCCACCTTAATGGGTCCTCTTTTGGCCTATGGGCCCATCTTTACTGGTTGGATGGTCAGTACAATACATCTGGGAGGTTTTAAACACTTGTTTACCGACCTTGCAAATTAGCACATGATCTTTCCCCGTGTTTTGTCCGAACTCACACGATTCTAGAAATTACTTCACGGAAGGTCATCCATCTTTTAACTACTCCAGCTCAAGCACGCTTTACTCTGGAGTTCTCTTTAAACAAGTGACCGAAAAGATAGTGCACTTTGATAACATAAGTGGTCAAATCAATTCTTTTAAACCTATCTACATGCACCACTATAATTTCCTAGAATTCTGGTGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold152_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

323697  

End:

323805

Strand:

-

>scaffold152_LTR-Cassandra_93

ATTCACCCCCATTAATAGATCCAACACCCTTGTTGCGTACCAAGATCGTCACCCCATGCGATGTAAGCTTTCTAGACTCCACACTCGATTTTGTTCGACTCTAATACCA

Lepidium meyenii (v1.0)

ID:

scaffold152_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

323808  

End:

324145

Strand:

-

>scaffold152_LTR-Cassandra_94

TGTAATGCCCCGCCCGCCACCTTAAAAGACCTCATATCCTTTCCAGGCTCGTGGACCCTCCTTTACCGGGCTGACGGTCGGTATGCTACGTCCATGATGCGTTAAATACTTGTTTACTCTTTGTGTCTTGTCCTCATTCACATGGTTCCAAAAATCACTTTCCAGAAAAACTCATCTTTCAACTACTCCAGCTCAATCACACTTAACCCTGAAGTTTTCTCTCAACAAGTGACAGAAAAGATAAGTGCATTTTTGGTGATATATGTAGCCAAATCAATTCTTTTAAACCTCTCTGCATGCACCACCATATACCATATTTCTCAAATCGAGGTGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold152_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

324146  

End:

324255

Strand:

-

>scaffold152_LTR-Cassandra_95

ATTCACCCCCATTAACATATCGCAACACCCTTGTTGCGTACCAAGATCGACTCTCTATACGGTGTGAGCACTGTAGACTCCACACTCGACTATGTTCGGGTCTGATACCA

Lepidium meyenii (v1.0)

ID:

scaffold158_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

72936  

End:

73289

Strand:

+

>scaffold158_LTR-Cassandra_96

TGTAACATCCCAGTTTTATAAAATATGGTATATGATAGTGCATGCGGATATGTTTAAAAGAATTGATTTGGCTATCAATGTTATCAAAGTGCAATTATTTTTTCAGTCACTTGTCTAGAAAGAACTTCACAGTTAAACGTGCTTAAGCTGAACTAATTGAAAGATAGGTAACCTTTTGGGAAGTAATTTTTAGAGATGTGCGAGTAGGAAAAATACGAGAAAAGATCATGTGGTGATTTATAGGTCTGTAAACAACTCTTTAAAGCCTCCCAGACATACCATACCTACTATCGGACCGGTAAGGTGCCCCACAAGCCGAGAGAGGATGTAAGGCCGACTAAGGTGGTGGTTGGG

Lepidium meyenii (v1.0)

ID:

scaffold158_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

142

Start:

73295  

End:

73436

Strand:

+

>scaffold158_LTR-Cassandra_97

AGATCATTTGATGATTTTTGAGGTCGGTAAACAAGTTTTTCAAGCCTCTCGGATGTAACGTACAGACCGTTCCACCAAAAAGGTGGGTACACGGGCCTCGAGAGAATGGGGGGCCCATTAAGGTGGTGGTCAGGGTGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold158_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

363

Start:

73527  

End:

73889

Strand:

+

>scaffold158_LTR-Cassandra_98

TATAACATCCTAGTTTCATAAAATATATTTTATGGTGGTGCATGCGGAGAGGTTGAAAAGAATTGATTTGACTTCTTATGTCACCAAAATGCACTTATCTTTTCGGTCACTTGTCAAGTGAGAACTATAGGGTTAAGCATGCTTATGCTAGAGTAGTTAAAGTATGGGTAACATTTCGGGAAGTGATTATCGGAACCGTGTAAGTGAGGACAAAACACAAGAAAAGATCATGTGGTGATTTGTAAGGTCAGTAAACAATTCTTTAAAGCTTCTCGGATGTAATGTACAAACTGTTCGACAGATAAGGTGGGCCCCTAGATCCATAGAGGACGTGGGGCCTATTAAGGTGGCAATCGGGGCATT

Lepidium meyenii (v1.0)

ID:

scaffold158_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

141

Start:

73892  

End:

74032

Strand:

+

>scaffold158_LTR-Cassandra_99

GATCATGTAGTGATTTGTAGGGTTGATAAACAAATCTTTAAAACCTCCTGGATGTAATGTACCAACTGTTCGACTGATAAGGTGGGCCCACATGCCCAAAAAGAACATGGGACCAATTAAGGTGGCGGTTAGGTTGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold165_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

235

Start:

732356  

End:

732590

Strand:

-

>scaffold165_LTR-Cassandra_100

ACTTCTAAAACATTTTAAAACTTGTTTACTGTCCTTAACATTACCATATATATGCTGTTTTTGTGTTTTGTTTTCACTTATAATGTACCAATAATTATCTTTTGGTATGTTATTTATTCTGAAATAATTGTAAAGTTGTTTTGATAAAATAAATGAATTTTAACGATATAGGTAATTTAATCAATTCTTTTTAAACACCTTATGCACCACTGTATTTCTAAATCGGAATGTTACA