ID:

LA_scaffold2399_LTR-Caulimovirus_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1612

Start:

1554  

End:

3165

Strand:

-

>LA_scaffold2399_LTR-Caulimovirus_61

ATCGTGACGTTAAGGCTTCATCGCATGACAAAAATCCTGGGGATAATGATTTTGGTTTCGGACCATAATGGTTTGAAAAAAAACCAGGAGAATAGGACCCTTGATACGTCGAAAAACTGGATGGAAAGTCTCCAAAAGTTGGAAAATACGAGTCTGAAGGCTTCCTATGATTTTTCATACTATCAAGACACCGTTGAAGATCTTTGAGTTTGTTTTTAAAATTGGCCATCTCTGCTTCTTTTGTGCGAAAATGAGAGGTGTTTGTTAGCATGTTTTTTGCCATGTTCATTATCTAATGATGGAGATTATCAAGCCTGCCGTTGATATCGGAGATAGAGCCTTGGAGAACGGTCATTCTCTTGATGTAATCTTCTGTTAAACGATCGACTTTATGATTTATTGTATTGAGGATTTAATTTTGAACTATTGCATTCTCCGTTTGCCAGTTGAGCACTTTTTCTCCTCGACTGAGCTGGTCTGGTCCAGAAGTGCCGATAACTTTAGGAATGATTTTAGGACTGTGAGCAATGTTATCTTTAGTAAAATCTCTATGTGGAGGAAAATCGTTTATCATCATAAACTCTTTTGACCGAGTGTCCTTGTTGTTCGAATATCGAACGACAAAATCATAGCGTCCACCTTCTCTAAGAGGACCAATTGTAGGATCATCTTCAAGGTATCGCCCGTATAGTGGATCTTTTTTCTTTCTCCTTCTCCTCTTAATTTTGTCGTCAGATTCATAATTGAGTTGGTCTTCTGAACATGCAGAGCAGTTACATACGTCAAAATATATATAACCTTCTTCATTTTTAAATGGATAGATTGGCATTCCATCTGTATCAAATCATAACGGTGCTGGCATTCGGTCTTCTATGTATTCTCTAGTTTGTTCGGTTAGCTCTGTAGAGAACTATGTGAAGAGCGGTCTGCGAAAAGATGAAGATCTTGGTTTTTCGAATTTTACTTCAGTTTTCCTATCACTTTTAGAGCTGTACGTGACCTCAGAGCTTTGGATCGGGGCGTTTGTTGCTTCATGAAGATTTTCACAGCAAGTTACCCAAGTTTCTGGTAGTTTTTTGATGAGTTCTTCTCGGGAGATCTGTCTTGGGATTTGGACTGAGGTTGGAGAAGCTGATGTGACTTCTAAGAATAAAGCTTTATCTGAGGACGGTAGTGTGAGGTCAAGAGCATGGTCTTGTACTCGGTAGACCATCTGATGGTGTAAGGTTGCTACGATGCTATTTTTTTGCATTAGTGCACAAACAAGTTGAAGTTAACGCCTTTAATAAATTTGGATCAGCTAGCAAAATATTGAAGTTTGGGAATAGTGTGATAAACACTGTTCCGGCGTTCAGAATTGTTTGAACTGTTCTGATACATGCTTGTTGGTATATTTTTAGTCGTGAGTCAGCTAAAGCTGTCATGGCTATAACTGGTAATCCCTTGCGAGCATGTAGGGTGAGACCAAGTCGTACTACACCGAAGTGTAGGTGAGTGAATCCTTGTTGTCTCCACATATCTAGTAGCTGTTTTGGGATGTTGAGACTTATAAATTGTTCTTCTTCTGTAGCTGGTATTTGACATGTAGAGAATTTGCTTGATTGTACATATT

ID:

LA_scaffold2399_LTR-Caulimovirus_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

264

Start:

3207  

End:

3470

Strand:

-

>LA_scaffold2399_LTR-Caulimovirus_62

ACTCCTTTCACTGAGAAAGGGCTGGTTTTTTTAAAAATATTTCATATGGATTTACTAGAGGGAGAGTTGTTTGTGGAATTTGATCAGTGTTTGAGACATATTCGATTTCGTAAAGAAAATCGATATGTGAAGATGAGGATTGGTTTTTTTATTTAGGCAAAGTTGAAAAAGAAAAAGGAGATTCGATTATCGAGAGATTAGAAGTTGACATTATATGAGATGTGTTTTCTAGTTTTCCGAAGCAATCACCCATAGACAATATTC

ID:

LA_scaffold2511_LTR-Caulimovirus_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

113

Start:

1  

End:

113

Strand:

-

>LA_scaffold2511_LTR-Caulimovirus_63

CCTTGTTGTCTCCACAGATCGGGTAGCTGTTTTGGGATGTTGAGACTGACAAACTGTTCTTCTTCTGTAGCTGGTATTTGACATGTAGAGAATTGACTTGATTGTACATATTC

ID:

LA_scaffold2511_LTR-Caulimovirus_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

262

Start:

154  

End:

415

Strand:

-

>LA_scaffold2511_LTR-Caulimovirus_64

ACTCCTTTCACAGAGAAAGGGCTGGGTTTTTTTGAGAATATTTCATAGGGATTTACAAGAGGGAGAGTTGTTTGTGGAATTTGATCAGTGTTTGAGACATATTCGATTTCGTAAAGAGAATCGATATTTGAGGAGGGTTGGCTTTTTGATCTGGGCAAAGTTGAAAAAGAAAAAGGAGATTCGATGACCGAGAGATTTGAGGTTGACATTATTTTGAAATATGTTTTCTAGTTTTCGAAGCAATCATCCATAGACAATATTC

ID:

LA_scaffold2581_LTR-Caulimovirus_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1866

Start:

12970  

End:

14835

Strand:

-

>LA_scaffold2581_LTR-Caulimovirus_65

GAGGTGTTTCAAGAGTGCTATTCTATTTGGTAGTGAAAACTTGACATCTTGTAGATATTGATTCAAATGTTTGTAATCAATAACTAGCCTTAGTTTATTTCTTGTTTGTTCTACTCTGTTGTTAACATATAAAGTTTTACACACTCATGGTGAGTTTATCAATGATACTATTTCTTGGTTAACGAGTTGATCACATTCCTCATTTGCTTGTTACAATAAAGCAAGTGACATTCATGCGCGGTTTATCTTAGTTGGAGTTGTGTTGACGTTCTCCTTAAATGGTAATGAGTAATGACACAACAAAACTCAGGATTTAACTATAAACGATTTTTGCATTTCAGCAAGAAGTCAGCATGAGAGTCTGCACAAGAAATTGCAGAAATCTCTTGCTTGATTTCAAATGCTACTGTCTTTGACTCTTCGATTATGTATAGATGAGAGAGTGTGGTGAAAATTTTGAAAAGATTTTTCCACTTGACTCCTTCAAGTTCTATCGGGATGCCAAATTTTCTTCGCATTATTGTGTAAACATTCTATCCAAGAACAATATCTTTTCTTGATTGGAAGAAATAAGAATTTGTGTTGTAATCTGACATCCTGAAAAAATTTATATAATGAATGGCTTGGATTTGAGTCTTACAGTTAGTATATCATGTGTCGCACTCGGAAATTCTTCATGAAAAAGTAACCACATTGATGGTGACAGAATCTTAAAATTAATAAATATTGAGTATGCTCCCGTAACGATGAAGACAATTATATGAAAATGGTCTTCTGCTCCAGTTAGATCAAATACCATTATTGGTAGATGCGATGATTGTCTTTCTCCTTTTTGAGGAATGTCAACAATTTCTATCTTTTGTTGGAAGATTTGACTGATTTTAAAGCATTAATCTTTATTTTCTTCACTATAAGAAGAATAAGAATCAGAGTCCAAAAATCCACATATAACATCTTTTTGGTTGTTATCGTAAGAAATGAATAATTCAAGATCATGCTCGTCGAAATCGATATTTTTAGCAAATTTGGATATCGAAATGATAATGTACTTTTTTTTCTTGGATTTTTTGGGATAAACTTTTGCAAAGTGTTTCTCTTTATGGCATAAAAACACTTAGAAGATTTTCTGAAGCTTTTCTTTTTTCGGAAGAAGCTTATGCGCCTGAATTTTGAAAATCTTTTGTCTCTTGATGATTTCTTAAATTCTTGAGATCTTATGTGCGATCTTCTATGATTAACACACGATCATGATTTTTTGAACATTTAGCTGAGGGGTTTGATCAGGCACATATTTTTGAAAGATGTTTTGATTTATCCATGAATTCTGTCCAGAATTCCTTTTACTTGCATTTGATGAATTTGTCCAATAGATAATTCTTATATTGATTGCCTTTGATCTATGATATACATCTTTGTTTGTTGACTGAGATAATCATCAACTAAAGATAAATATACATGCTTCAAACTATGATTGTTAAAGCCATTGAGAGCGTAATACCTCTTTGTTTGGTTCTCTAAATGTTTCGCCAAATTTTTCTTGTTCAAGGAGCAATATTTTGCTATAAAATATTCTTCTTGTAGTTAATCTTTGATGTGACCAGGCGTACCAATAAATTTTATGTGAATTTCACCAAAAAGTAGTGGTATTATCGTTTGATAGAGTTGTTATTGTCTATAGTCTCCAAGTGAAGTCAAACATTCTTTAAAAGCTTAAGAGAATTGGGTCGTTTATTGTTGTATAACTTCAAAAGTTATCGAAGTTAACGCCTCAGAAATTAACCATGCATGAAATCCGTCTACGTGATTATTCTATTGGTTGAAAAGAATATCATCAAATGTGAAGGTTATCACTTTTGATGCAAATTG

ID:

LA_scaffold2581_LTR-Caulimovirus_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

425

Start:

15642  

End:

16066

Strand:

-

>LA_scaffold2581_LTR-Caulimovirus_66

TATACTATCAAGACATCGTTGAAGATCTCTTAGTTGATTTTTGAGAATTTCCATCTCTGCTTCTTTTTTGCGGAAATAGGAAGTATTTATTAGTATAAGTTTGGCCATATTCATCATCTTATGATGGGGATTATCAAGTCTGCCGTTGATATTGGAGATTAAACTCTGGAAGATAGTCATTTTCTTTATGAAGTCTTCTGTTAGGCGATCAATTTTATGATTTATCGTATTTGGGATTTGGTTTTGAAGTATGGCATTATCCGTTTGGTAGTTGAGTACCTTTTCTTCTTGATTTAGCATGTTTAGTCAAGAAGAGCCGATGACCTTCGGGATTATTTTTGGGCTATGGGCAATATTGTCTTTACTAATATCTTCGGGCGAGAAAAATTGTTTATCATCATGAACTATTTTGTTTGATTATCCTT

ID:

LA_scaffold2782_LTR-Caulimovirus_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

862

Start:

379  

End:

1240

Strand:

+

>LA_scaffold2782_LTR-Caulimovirus_67

AAGAAAATTTGCGTCAAAAGTGATAACTTTCACATTTGATGATATTCCTTTCAAACAGTGGAATAGCTGCCTAGATGAATTTCATGCATGGTTAACTTCTGAAGCTTTAACTTCAACTACTTTTGAAGTTATACATCAATTCACGGCCCGACTCTCAGAAGCTCTAAAAGAATGGGGGACTTCTCTTGGAGATTATAGACAACAACAAGTCTATCAGACCACGATACTGTTACTTCTTGGAGAAATACATAGAGAATTCATTGGTACGCCTGGTCATATCAAAGATCAACTGCAAGAAGAATATTTCATGGCTAAATGTTGTTCTTTGAACAAAAAAGATTTGGAGAAACATTTCGAGAACCAAACAAAACTGTATTACGCACTCGACGGTCTTAACAATCCAAGTCTGAAACATGTCTATTTATCCTCGATTGATGACTATCTTAGTCAACAAACAAAGATGTATATTAGAGATCAAGGACAGTCAATAGAAGAAATATCTGTTGGACAAATTCAGCAGTATGTTTTTCGGACACTTGACAAACTTTGCAAGCAAAAGAATTATGGACAGAATTCATGGATAAATCAAAACATCTTTCTAAAGTTTGTGCAAGGCCAGATCTCTCCATCAAATGTTCAAAGAATTCATGCTCGTGTGATAATCGTCGAAGATCACACAAAAGGTCTCAAATCTTTAGAAGATCATCAGAGAAAATAATTTCATGAAATTTAGTCGCAAACGTTTCTTTCGAAGGAAGAAAAGCTTTAGAAAATCTTCTAAATGCTTCTAATGTCATAAAGAGGGACATTTTGCCAAAAATTGTCCGAGCAAGTCCAAGAAAAATAAACAATACATCATCCA

ID:

LA_scaffold2782_LTR-Caulimovirus_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2837

Start:

1811  

End:

4647

Strand:

+

>LA_scaffold2782_LTR-Caulimovirus_68

ATATCATCAATTCGATATCAAGATTCACTGGAGATATCAACCTCGACGAGCATGATTTGGAATCTGTTCTTTCTTACGATAGCGATAAAAAGATGTTACATGTGGATTTTCGGACTCAGATTTGGAATCTGACTTTCCTTATAGCGAAGAAGAAGAAGATTGCTGTTTCAAAATCAGTCAAATCGTCCAACAAAAGTTGTAGATGGTCAATACCCCTCAAAGAGAAGATAGACAACCACCATATCTACCAATAACGGTATTTGACCCAACTGGAGCAGAAGACCCTGTTCATCTCATTGCCTTCATCAATACAGGAGCATAGTCAACATTCATGAATCCCAATATTATACCACCATCAATGTGGTTGCCTTACCATGAAGAATTTCACAGTGAGACACAAGACATATTAATCGTCAGACTCAAATCTAAGCCAATCACTATAGAGATTTTTCCGGGCTGTCAAATTACAATGCAAGTTCTCGGTTCTTCATATCCAAGGAAGGATATTGTTCTAAGATGAGACATTTACACAACAATGAGAAGAAAATTTGGCATCTCAATAGAACCAATGGAGTCAAGTGGAAAAATCACTTCAAGCCTTTCACTACACTTTCTCGTCTCTATGCGATTGAGGAGCCAAAGACAGTAGCATTAAAAGAAATCGAGCAAGAATCTCTGCAATCTCTTGTGCAGACTCCCATATCGACTTCCTACTGAAATGCAAAAATCCCTTATGGTTAAATCCTGAATTTTTCGTCTCTTTGCCTTTTAAAGAAGACATCAACATCACTCCAACTAAGGCAAGTCATGCAGGAATGCCACCAGCTTTACTACAGCAAGAAAATGAGGAATGCGATCAACTAGTCAACCAAGGGATAGTATCATCAACAAATTCACCATGGGCATGCAAAGCTTTCTACATTAACAACAGAGCAGAACAAGCAAGGGGAAAACTGAGGCTAGTCATTGATTATAAGCCTTTGAATCAATATCTACAAGATATCAAATTCTCACTGCCAAATAGAACATCACTTTTTCAACATCTCTCTGGAGCAACAATTTTTTCAAAGTTCGATCTCAAATCAGGATTTTGGCAAATCGATGTACATCATGAAGAAAGATACAAAACAGCATTTTGTTAACCAATCGTCATCTTCAGTGGAAAGTCCTACCATTCGGTCTCATGACAGCGCCATCAATATTTCAACAGGCTATGTTACGAATATTCAAACATATACTAAACACTGTTTTGGTATACATTGACGATATTCTACTATTTTCATCAAACGAAGAAACCAATATTCAACTACTTCAACAGTTCCATGACATCATTAAGAAATATGGAATAATGCTATCAGCCCAAAAAATGATCATAGTCAAGCCCAAGATCAAGTTTCTAGGAGTTATTATCGAAGACGGACATATAGCAACAGAGCTCATTGATTTTCCCGAAGAAAACTTAACAAAAAAACAAGTCCAACAATTCTTAGGCGTCATCAATTATCTCAGAGACTTTATTCCAAAACTATCAGAAGTGACACAACCACTCAGGAAAATGCTGACAAAGAATCCACCACAATGGAAAAAGAGACAAAATCATTATCTTGAAGAAAGTAATTCAAAAGCTGCCACCTTTAAAGATTCCCTCAACAGGAACCCGCATTATCCAAACTGATGCAAGCGACAAATATTGGGGAGCGGTACTTTTCGAGACAATATCTCAAGAAGGCGACAAAGAAAAAAGACAAATCTGCGGATATCAGAGTGGACGTTTCACGAATTTGGAACTGCACTAGCACTCAACTTTCAAAGAGATCATAGCAGTCAAAAAAGCCATCAAGAAATTTGAATTCCACCTCATAGGGTACAGATTTCAAATAGAAATGGACATGTTTTCTTTTCCAAAGATGTTACAATTCAAGCAGAAGATGGTCCCACACCATTAATTATTACGATGGAGTGGATGATTCTCAAAATACGACTTCGAATTGTTCTATTTAAAGGGTGAGAAGAACATTCTTGCAGATATGCTCAATAGAAATCCATTAAAAGAAAACAAAAAATATCACATGATGGAAGGATCCTCTACCCCCTCCGCTTCCGAAATCAAAGACCTTTTCGATTTCAACGCAACTGTTCCGAAAGACGTTTACGAACTCATTGATGCCGGAAAGTTCCACGAAGGACTCAAACATAAGATATTTTACTGTCAAGGAAGGATACTTTCATGGCATGGCGCGATGTGTTGTTACATACAACCACTAGGAATTCATCCTGACTATCCATTCGCACATCTATTCCGTATTCAAAGCTCTTCCTTACCACAAGAAGTTTTATGCTTTCTCTGCTATTTGTGTTCAGTTTACACCATCGGAATAATCTTTGATATACAATGACTATATCAATATGTCAACAAGGTTCAAGGACAGAAAGATTGTCTAGCAGAATTTCTCTCTTGGTTCGACCAACTAGGAAGCTGGAGCGAAAAACTGAGGAACTCGACAAAACAAATGGATATACCATACAAAAAACTTAAAAATTCCAGACGTATGAATCCATTTTTCAACCCTCACACCATCTACTTCTTCCACAGGCCAGTCCAAATTAACAAACGGTCAAAGAAAATACATGCATTGCTGACTCTCATTCATCACAAAGATTTCAAAAATGGTGTTTGCCTTGACTTCAACATCTGTGATAATAAACCATATGAAGAATTTCAGAGACATGCATTTCGCCTCAACAATGCAACACAGTCATTTCCTATCCCGTTTAACATGAGTTAGACGTATTACCCGATTGATTATCAGATTAATCTAGACGAGGATCTATCATAT

ID:

LA_scaffold2804_LTR-Caulimovirus_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

246

Start:

977  

End:

1222

Strand:

+

>LA_scaffold2804_LTR-Caulimovirus_69

TAGTGATATAGAAAATGATCTTATCACATAATTAAAAGATAAAAGAAATGATGTAATTGTGAGGTAAGCGCTTATGTCAGCACACTTATCATCCACTATAAATGTGTGTATACCATTCATTGTAATGCATTCACAAATTTCCTATAAAACCTATCTCTATTTTCTCTCTCTAAATGAGTCTCTAGATTTATCTCTAATTTTTCAGAATTTGAATGTCTTCATAACTATTCTTTCTTTGCGATTCTA

ID:

LA_scaffold2881_LTR-Caulimovirus_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

229

Start:

37920  

End:

38148

Strand:

+

>LA_scaffold2881_LTR-Caulimovirus_70

AGTCATAGGTAACAAGATAAGAGAAAGTACATCAATCACCCCAAGTATTAGTCCATAAGTGAGTTTAGAACAACTGAGATCAAGTTTGAAAAGCCTAGATCTTTCTAATTTTGAAAACATTTGTTCACCAATTTTCAATATTAATTGATGAACAAGAATTCTTCTTCCTGTACAAAGATCATTTCTTTGAGTTAATATTGAACAATTGTTGATCCTGTCAAGGATGAAA

ID:

LA_scaffold2881_LTR-Caulimovirus_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

239

Start:

45975  

End:

46213

Strand:

+

>LA_scaffold2881_LTR-Caulimovirus_71

AGTCATAGGTAACAAGATATGAGAAAGTACATTAATCACCCCCAAGTATTAGTCCAGAAGTTAATTTAGAACAACTGAGATCAAGTTTGAAAAGCCTATAGATCTTTCTCATTTTGAAAACATTTGTTATTTCAATATTAATTGATGAACAAGAATTCTTCTTCCTGTACAAAGATCAAGTTTCAAAGCCAAATTTTCAGGTTAATATGGAACAATTGTAAATCTTTTCAAGGATGAAA

ID:

LA_scaffold308_LTR-Caulimovirus_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

694

Start:

7620  

End:

8313

Strand:

+

>LA_scaffold308_LTR-Caulimovirus_72

GAATATGTACAATCAAGCAAATTCTCTACATGTCAAATACCAGCTACAGAGGAAGAACAATTTGTAAGTCTCAACATCCTAAAACAGCTACCAGATCTATGGAGACAACAAGGATTCACTCACCTACACTTCGGCGTAGTACGACTTGGTCTCACCCTACACGCTCGAAAGGGACTACCAGTCACATCCAGAATAGCTTTAGTCGACTCACGACTAAAAACATACCAACAAGCATGTATCGAAACAGTTCAAGCAATCTAAACGCCGGAAGAGGGTTTATCACACTATTCCCAAACTTCAACATTTCGCTAGCCGATCCAAATCTACTAAAGGCGTTAAAAGTTCAACTTCAATTTGTTGGTGCACCGATGCAAGAAAATAGCATCGTAGCAACCTTACACCATCAGATGGTCTACCGAGTACAAGACCATGCTCTTGACTTCACACTACCGTCCTCAGATGAAGCTTTATTCTTAGAAGTAACATCTGCTTCTCCAATCTCAGTCCAAATCCCAAGACAAATTTCCCGAGAAGAGCTCATCAAAAAACTACCAGAAACATGGGTAACTTGCTATGAAAAACTTCATGAAGCAACAAGCGCCCCAATCCAAAGCTCTGAGGTCACGTACAACTCAAAAAGTGATGGTACAACTGAAGTAAAATTCGGAAAAAAAACCAAGATCTTCATCTTTTC

ID:

LA_scaffold3542_LTR-Caulimovirus_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

957

Start:

9930  

End:

10886

Strand:

+

>LA_scaffold3542_LTR-Caulimovirus_73

CAACTCCGAAGCACGTATATTTATCTTCAATTAGTGACTATCTTTGTCAACGAACTAAGATGTATATATATCACATATCAAAGTTAGTCAATAGAAAAAATATCTATTTGATAAATTAAATTTGATAAACTTTGCAAGCAAAAAGAATTCTAGACAGAATTTATAGATATATCAAGACATCTTTCGAAAGTTTGTGCTAGACCAGATCTCTCCATCAAATGTACAAAAAAGTCATGTTCGTATGATAATCGTCGAATATCGCACAAAAAGTCTCAAATATCTAGAAGATCGTCCGGAGAAAATAGATTCACATAATTCAAATGCAAACATTTCTTTCGAATGAAGAAAAGCTTTAAAAAGTCATCTAAATGTCCCAGCAAGTCCAAGAAGAAGAAGCAATACATTATCAATTCGATATCAAGATTTGTTAGAGATGTCAACCTTGACGAGCATGATTTGAAATCTATTCTTTCTTATGTTGGCGATAAAAAAGATGCTATACGTGGATTTTCGGATTTAGATTCAGATTATGACTCTCCCCTTATAGCGAAGAAGAAGGAGATTGCTGTTTTAAAATCAGTCAAATCGCCCAACAAAAGTTGCAAATAGTCGACACCCCTTAAAGAAAAAATAGACAACCACCACATCTACCAATAAACATTGTTTGACCGAACTAGAGCGGAAGACCCTGTTCATCTCATTGTCTTAATCGATACATGACCATACTCAACGTTTATGAATCCCAAGATTCTACCACCATCAATGTGGTTGCCTTACCATGAAGAATTTTGCAGTGTGACACAAGATATATTAACCGTAAGACTCAAACCTAAACAAATCACTATAGAGATTTTTCCAAGCTGCTAACTTACGACGCAAGTTCTCGGTTCTTCCGAACCAAAGAAGGATATTGTTCTAGGATGAAACATTTACACAACAGTGAGAAGAAAATTTCTC

ID:

LA_scaffold3542_LTR-Caulimovirus_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2643

Start:

10955  

End:

13597

Strand:

+

>LA_scaffold3542_LTR-Caulimovirus_74

TCTTGTGCAGACTCCCATACCGGCTTCCTGCTGAAATGCAAAAATTCCTTGTGGTTAAATCCCGAATTTTTCATCTCTTTATCTTTTAAAGAGAACATCAACACCACTCCAACTAAGGCGAGTAACGCAGGACTTCCAGCTGTTTTACTGCATCAAACAAATGAAGAATGTGATCAACTAGTCAACCAAGGAATAGTATCATCAACAAATTCACCGTGGGCGTGCAAAGCTTTCTACATTAAAAACAGGGCAAAACAAACAAGGAGAAAATTGAGGCTAGTTATTGATTATAAATATTTGAATCAGTATCTACAAGATATCAAATTCTCACTGCCAAATAGAAGAGCACTTTTGCAACATCACTCTGGAGCAACAATTTTTTTAAAATTCGATCTCAAGTCAGGATTTTGGCAAATCGGCGTACATCCTGAAGAAAAGTATAAAACAATGTTTTTTTTACCAAATTGTCATCTTTAGTGGAAAGTACTACCGTTCGGTCTCAAGACAGCGTCATCACTATTTCAACAAGCTATGTTATGAATATTCAGACCTATATTAAATACTGCTTTGGTATACCTTGACAATATTCTACTATTTTCATCAACCGAAGAAGCCCATGTTCAACTACTTCAACAGTTTCATGACATTGTTAAGAAGTATGAGATAATGCTCTTGTCCCGAAAGATGATCATAACCCAGCCCAAGATCAATTTTCTAAGAGTTATTATCAAAGAAGGACAAATAACACCACAGGCCCATTTGGCGACAGAGCTCGTTGATTTTCCTGAAGAAAATTTGACAAAAATATAAGTCCAAAAATTCTTAGGCGTTATCAATTATCTTAGCGATTTTATTCCGAAACTGTTAGAAGTGACACAACCACTCAGAAAAATGCTAACAAAGAATCCACCACAATGGACAAAAAGACAAACAGAAACTATCATTATCTTGAAGAAAGTAATTCAAAAGCTACCCCTTTTAAAGATTCTTTCAACAGAAACTCGCATTATCCAAACTAATGCAAGCGACAAATATTAGGGAGCAGTACTTTTCAAGGCAATATCTCAAGAAGGCGACAAATAAAAAAGACAAATTTGCAGATATCAGAGTGTACGTTTCACGGATTCGAAGCTACATTACCACTCAACTTTACTTTCGAATCAAAATGGACATATCTTCTTTTCCAAAGATGTTACAATTCAAGCAGAATATGGTCACACACCAGCAATTATTACGATGGAGCGAATGGTTATCAAAATACGACTTCGAATCGTTCTATTTAAAGGGCAAAAAAAAATATTCTTGCAGATATACTCAACAGAAATCCACTAAAAGAAAACAAAGAAGTTCATATAATGAAAAAATCCTTTCTTGCCTCCAAAACCAAAGCCCGTTTCGATTTCAACGCAACTGTTCTGAAAGACGTTCATGAACTCATTGATGCCAAAAATTTCCACGAAGGACTCAAACATAAGATATTTTACTAGCAGAGAAGAATATTTTCATACCATGGCGTGTTGTGCTGTTACATACAACCACTAGGAAATCATCTTGACTACCCATTCGCACATCTATCCCGTATTAGAAGCTCTTCCTTACCACAAGAAGTTCTATGCTTTCTTTGGTATCTGTATTTGGTTTACACTATCGGAATAATCTTTGATATACAGTGGATATATCAATATGCCAACAATGTTCAAAGTCAGAAAGAATTTCTCTCTTGGTTTGACCAATTAGGAAGCTGGAGCGGAAAACTAAGGAACTCGGCAAAACAGATGGATATACCATACAAAAAACTAAAAAATCCTAGAGGTATGAGTCCATTTTCAGCCCTCACACCATCTACTTCTTCCACAGGTCAGTCCAAGTCAACAAACAGTCAAAGAAAACACACGCATTGCCGACTCTCATTCATCACAAAGATTTCAAATATGGTGTTCATCCTGACTTCAACGTTAGTGATAATAAACCATAAGAAGAATTCCATGACATGCATTTCGCCTCGAAAATGCAATACAGTCGTTTCCCATCCCGTTTAATATGAGTTAGACATATTATCTGATTGATTATCAGATGACTCTCGACGAGGATCAATCATATTCTACTTGAAGTCAGAACTCGCCCTGCAAAAAAGAAAAATTGAACAACCAATAACTCAGCCTCAACCAAAGACTGAGCTTAAAACTAAAGATCCACAAGATATTTTAAAGACTTTCAATTACCAGAGGAACAAGACTTTGATGAGATCGAAAGAATATTTGATATCAATGTCAAAATGGATACAGAAGAAACCGAAGACGAGTCTCAATGGAATGAAGAAATATACAAAAACATGTGCAGAGGAGAATATTATGGCTGCTGCGATGAACACATTATCAAGTTCGAGATAGACCACTAAGAATATTCTTGAAGATCCTGCATAATAATAATTAAATAATAATTATGTATAATATAAAATGTGCTAAACATAAAAAAATAATACTCCAAATAATTTAAAGTGAAGTAACCGCTTATGCAATCAAGAACTCCCTCACAACGATAAATATGTGTGTACCCATTGTAATATCCCATTCAAAAATTTCTTATAAAACCTCTATCTTATTTATCTCTCTAATATCTCACTAAAAACTCTCTCTTGTTTTC

ID:

LA_scaffold3542_LTR-Caulimovirus_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

106

Start:

13602  

End:

13707

Strand:

+

>LA_scaffold3542_LTR-Caulimovirus_75

TACCAAGGTTCTTATTCTCCTGGTTTTTTATCGAGCAACAATAGTCCAAAACCAAAGTCATTCTCACCAGAATTTTTGTCATGTGATGAAGCCTTAACATCACGAT

ID:

LA_scaffold3542_LTR-Caulimovirus_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1379

Start:

14054  

End:

15432

Strand:

+

>LA_scaffold3542_LTR-Caulimovirus_76

GAAGAATCTCTGCCTAATTTATTTGCCATTGGAGATCAAGGAAATTCGTCGAATCCTAAGTTCAAAGTATACTCCAGTGATGAAGAAATTAATCAAGGCAGAGATAGAAGCCGACAAACTTTTCATGAGCAAGACAATTTGCATCAAAGGTGATAACTTTCACATTTGATGATATTCTTTTCAAACAATGGGATAACCGCCTAGAAAAATTTCATGCATGGTTAACTTCTGAAGCATTAATCTCAATAACTTTTGAAGTTATACAACAATTCACGGTCCGACTCTCAAGAGCTCTAAAAATGGTGGACTTCGCTTGGAGATTATAGACAACAATAAGTCTATCTAACAATAATACCGCTACTTCTAGGTAAAATTCATAGAGAATTCATTGGTACGCCTGGTCACATCAAAGATCAACTACAAGAAGAATATTTCACGGCTGAATGTTGTTTTTTGAACAAAAAAATGATTTTGCAAAACATTTCGAGAACCAGACAAAACGGTATTATGCCCTCGACGGTCTTAACAATCCAAGTCTAAAGCATGTATATTTATCCTCGATTGATGACTATCTTATTCAAAAAACGAAGATGTATATCAAAGATCAAAGGCAGTCAAAAGAAGAAATATCTATTGAACAAATTCAGTAGTATGTTTTTCAAACACTTGATACTCTTTGCAAGCAAAACAAATTCTGGACAGAATTCATGGATAAATCATGAAATCTTTCAAAAGTTTATGCTAGACCAGATCTCTCCATCAAATGTACAAAAAATTCATGTTCGTGTAATAATCGTCGAATATCGCACAAAATTTCTCAAAGATTTAGAAGATTGTCCGGAGAAAATAGATTCACGAAATTCAGACGCAAACGTTTCTTTCGAAGGAAGAATAGCTTTAGAAAGTCATCTAAATGCTTCTTATGCCATAAAGAGGGACACTTTGCAAAAAGTTGTCCCAACAAGTTAACCTCGACGAGCATGATTTGGAATATGTTCTTTCTTCCGATAGCGATGAAAAAGAACCTATATGTGGATTTTTGGATTCAGATTCTGACTCCCCTTATAGCGAAGAAGAAGGAGATTGTTGTTTTAAAATTAGTCAAATCGTCCAACAAAAGTTGCAAATGTTCGACACCCCTCAAAGAGAAAATAGACAACCACCACATCTACCAATAACTGTTATTGACCCAACTAGAGCGGAAGATCATGTTCATCTCATTTCTTTCATCGATACAGGAGCATACTCAATGTTTATGAATCCCAAGATTCTACCACCATCAATGTGGTTGTCTTACCATGAAGAATTTTGCAGTGCGATACAAGATATATTTACCGTGAGACTCAATTCTAAGCTAATCACTATAGAGATTTTTACAG

ID:

LA_scaffold3542_LTR-Caulimovirus_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

250

Start:

15748  

End:

15997

Strand:

-

>LA_scaffold3542_LTR-Caulimovirus_77

GAGAAGAACAAAGGCTATGGAGATGCCTAAGAGAACCATAAAACAAGAGAGAAAATTTAGTGAGACATTAGAAAGAGAAACAAGAGATATTTTATAAGAAATTTTTTTAATCGGATCTTACAATGGGGTGCACACATATTTATAGTAGTGAGAGAGTGTTTGATGACATAAGCGCTTACCTCACTTTACATTATTTATTATTATTTTTATATTTAACACATTTTATATTATACATAATTATTATTTAATT

ID:

LA_scaffold3566_LTR-Caulimovirus_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1628

Start:

690  

End:

2317

Strand:

-

>LA_scaffold3566_LTR-Caulimovirus_78

ACCGTGACGTTAAGGCTTCATCGCATGACAACAATCCTGGTGAGAATGACTTTGGTTTTTGACCATGGTTGCTTGAGAGAAAACCAGGAGAATAAGATCCTTGATACATCGAAAAATTGGATGGAAAATCTCCAAAAGTTGGAAAATATGAGTCCATAGGCTTTCTTTGATTTTTCATACTATCAAGACACCGTTGAAGATCTTTGAGTTGGTTTTTTAAATTGGCCACCTCCGCTTCTTTTGCGCGAAAATGAGAGGTGTTTGTTAGCATGTTTTTTGCCATATTCATCATCTCATGATGGAGATTATCAAGCCTGCCATTGATATCTGAGATCGAACCTTGGAGGATGGTCATTCTCTTGATGTTTTCTTCTGTTAAGCGATCGACTTTAAGATTTATTGTATTGAGGATTTGGTTTTGAACTATTGCATTCTCTGTTTGCCAGTTGAGTACTTTTTCTCCTTGACTGAGCTGGTCTGGTCCAGAAGCGCCGATGACTTTTGGAATGATTTTAGGACTGTGGGCAATGTTATCTTTAGTAAAATCTCCATGTGGAGGAAAATCGTTTATCATCATAAACTCTTTTGACTGAGTGTCCTATTTGTCAGAATATCAAACGAGGAAATCATAGCGTCCACTTTCTCCAAGAGTATCGATTGTAGGATCACCTTCAAGGTATCACCGGTATAGTGGATCTTTTTTCTTTCTTTTTCTCCTCTTAATTTCGTCGTCATATTCATAATTGAGTTCGTCTTCTGAGCATGCAGAGCAGTTACATATGTCAAAATATATATGAGCTTCATCATTTTTAAATGGATAGATTGGCGTTCCATCTGTATCAAATTATAACGGTGCTTGCATTCGGTCTTCTATATATTCTTTTGTCTGCTCGGTTAGTTCTATAGAGAACTGTGTGAAGAGCGGTATGCGAAAGGATGAAGATCTTGATTTTTAGAACTTTACTTCAGTTGTACCATCAGTTTTAGAGTTGGACGTGACCACAGAGCTTTGGATCAGGGCGTTTGTTGCTTCATGAAGTTTTTCATAGCAGGTTACCCAAGTTTCTGGTAGTTTTTTGATAAGCTCTTCTCGGGAGATCTGTCTTGGGATTTGGACTGAACTTAGAGAAGCTGATGTGACTTCTAAGAATAAACCTTCATCTGAGGATGGTAGTGTAAGGTCAAGAGCGTGGTCTTGTACTCAGTAGACCATCTGATGGTGTAAGGTTGCTAGGATGCTATTTTCTTGCATTGGTGCACCAACAAGTTGAAGCTGTACTTTTAACGCCTTAATAGATTTGGATCAGCCAGCGAAATGTTGAAGTTTGGAAATAGTGTGATAAACACTGTTCCAGCGTTCAGAGTTGCTTGAACTGTTCCGATACATGCTTGTTGGTATGTTTTTAGTCGTGTGTCGACTAAAGCTATTCTGGCTGTGACTGGTAAACCCTTTCGAGCGTGTAGGGTAAGACCAAGTCGTACTACACCGAACTGTATGTGAGTGAATCCTTGTTGTCTCCATAGATCTGGTAGCTGTTTTGGGATATTAAGACTAACAAATTGTTCTTCTTTAGTAGCTGGTATTTGACATGTAGAGAATTTACTTGATTGTACATATTCTCTAACAC

ID:

LA_scaffold3566_LTR-Caulimovirus_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

272

Start:

2350  

End:

2621

Strand:

-

>LA_scaffold3566_LTR-Caulimovirus_79

ACTCCTTTCACAGAGAAAGGGCTGAGCTTTTTTGAAAATATTTCATATGGATTTACAAGAGGGAGAGTTTTTTGTGGAATTTGAACAGTGTTCGAGACATATTCGATTTCGTAAAGAGAATCGATATTTGAGTAAGAGGACTGGCTTTTTGATCTGGGCAAGGTTGAAAAAGAAAAAGGAGATTTGATAACTGAGAGATTAGAAGTTGACATTATTTTGAGATATGTTTTCTAGTTTTCCGAAGCAATCATCCATAGACAATATTCATCTTT

ID:

LA_scaffold734_LTR-Caulimovirus_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3612

Start:

30206  

End:

33817

Strand:

-

>LA_scaffold734_LTR-Caulimovirus_80

GTGATGAATGAGAGTTGGCAATGCGTGTATTTTCTTTGATCTTTTGTTTATTTGGACAGGTCTGTGGAAGAAGTAGATGGTGTGAGGGTTGAAAAATGGATTCATATCTCCGGGATTTTTTAGTTTTTTGTTTGGTATATCCATTTGTTTTGCCGAGTTCTTCAGTTTTCCGCTTCAGCTTCCTAGTTGGTCGAACTAAGAAAGAAATTAGGCGAGACATTCTTTCTGACCTTGAACATTGTTGACATATTGATATATCCAATGTATATCAAAGATTATTTTGATGGTGTAAACTGAACACAGATACCAGAGAAAGCATATAACTTCTTATGGTAAGGAAGAACTTTGAATACAGAATAGATGTGCGAACGGATAGTCAGGATGAATTCATAGTGGTTGTATGTAATAGCACGTCGTGTCATACTAGGAAATTATCCTTCCTTGCCTGTAAAATATCTTATGTTTGAGTCCTCAATAGAACATTCCGTTATTAATGAGTTCATGAACGTTATTTGGAACAGTTGCGTTGAAATTGAAACGGTATTTGATTTTGGAGGCGGAGGCGGTAGAGGATCCTTCCATCATATGAACTTCTTTGTTTTCTTTTAATGGATTTATGCTGAGCATATCTGCAAGAATGTTCTTCACACCCTTTAAATAGAATGATTCAAAGTTGTATTTTGAGAATCATTCGCTCCATCGTAATAATTGCTGGTGTGGGACTATTTTCTGCTTGAATTGTAAAATTTTTGGAAAAGAAAACATGTCCATTTCTATTCAAATTTTTGAAGGCTCTTTTGACCGCTAGGATCTCTTTGAAAGTTGAGTGGTAGTGCAGTTTCGAATCCGTGAAACGTCCACTCCAATATCAGCAGATTTGTTTTTTTTTTTAATCGCCTTTTTGAGATATTGCCTCGAAAAGTACCGCTCCCCAATAATGCGGGTTCCCGTTAAGGGAATCTGTAAAGACTTTTGAATTACTTTCTTCAAGATAATGATAACTTATGTTTGTCTCTTTGTCCATTGTGGTGGATTCTTTATCAGCATTTTCCTGAGTGGTTGTGTCACTTCTAACAATTTGGGAATAAAGTCGCTGAGATAATTGATGACACCCAAGAATTGTTGGACTTGTCTTTTTGTCAAATTTTCTTCAGGAAAATCAACGAGCTCTGTCGGCTGCCGCCAAATGGCATGTGGTGTTATTTGTCCGTCTTCGATAATAACTCCTAGAAACTCGATCTTGGGCTGGGTTATGATCACCTTTCGGGCCGAGAGCATTATTCCATATTTCTTAACAATGTCATGTAATTGTTGAAGTAGTTGAACATGGGCTTCTTCGGTTAATGAAAACAGTAGAATATCGTCAATGTATACTAAAGTAGTATTTAATGTAGGTTTGAATATTCGTAACATAGCCTGTTGAATTAGTGATGGCGCCGTTTTGTGAACAAACGGTAGTACTTTCCACTGAATGTGTTGATTTGGTAAACAAAATGCGGTTTTATTCCTTTCTTTAGGATATACACCGATTTGCCAAAATCTTGACTTGAGATCAAATTTTAAAAAAGTTGTCGCTCCAGAGAGATGTTTCAAAAGTGTTCTTCTTTTTGGTAGTGGGAATTTGATATCTTGTGATATTGATTTAAAGGCTTATAATCAATAACTAGCCTCAGTTTTTCTCTTGCTTGTTTTGCCCTGTTGTTAACGTAGAAAGCTTTACATGCCCATGGTGAATTTGTTAATGATACTATTCCTTGGTTGACCAGTTGATCACATTCCTCTTTTGCTTGCTGCACTAAAGCAGGTGGAATTCATGTGTTGGTCGCTTAGTTGGAATGATGTTGATGTTCTCTTTAAAAGGCAAAAAAACGAAAAACTCGGGATTTAACCATAAAGGATTTTTGCATTACAGTAGAGAGTTGGTATGGGAGTCTGCACAAGAGATTGCAGAGATCACTTGTTCGATTTCTTCAAATGTCACTGTCTTTGGCTCCTCAATTGCGTAGAGACGAGAAAGTTTAGTGAAAGGCTTGAAGAGATTTTTCCACTTGAATCCTTCTAGTTCTATCGAGATGCCAAATTTTCTTCTCATAGTTGTGTAAATGTCTCATTCTAGAACAATATCCTTCTTCGGTTTGGAAGACCGAGAACTTGCGTCGTAATTTGGCAACCTAGGAAAATCTCTATAGTGATTGGCTTAGATTTGAGTCTTACGGTTAATATATCTTGTGTTGCACTGCAAAATTCTTCATGGTAAGGTATTCACATTGACGTGGTAGAATCTTGGGATTCATGAATAATGAGTATGTTCCTGTATCGATGAAGGCAATGAGATGAATAGAGTTTTCTACTCCGATTGGGTTAAACACCGTTATTGGAAGATGTGGTAGTTGTCTATCTTCTCTTTGAGGGATGTTGACCTCTGCAACTTTTGTTGGGCAATTTTACTAATTTTAAAACAGCAATCTTCTTCTTCTTTGCTATAAAGGGAGTCAGATTCTGAATCCGAAGATCTACATATAGTATCTTTTTCATCGCTATCGTAAGAAATAACAGATTCCAAATCATGCTCGTCGAGGTTAACATCTCCAGCAAATCTTGATATCGAATTGATAATGTATTGGACCTGTTGGAACCATTTTTGCAAAGCGTCCCTTTTTATGGCATAATAAGCATTTAGATGACTTTCGAAAGTTTTTCTTCCTTCGAAAGAAACGTTTGTGCCTGAATTTCATGAATTTATTTTTTCTAAACGATCTTCTAAATATTTGAGACCTTCTATGCGAACTTTGACGTTTATCACATGAACATGACTTTTTGGAACATTTGATGGAGATATTTGGCTTTGCACAAACTTTAGAAAGATGTTTTGATTTATCCATAAATTTTGTCCAAAATTCGTTTTGTTTGCAAAGTTTATCAAGTGTTCGAAAAACATACTGCTGAATTTGTCCAATAGATATTTCTTCTATTGACTGCACTTGACTCTGATATACATCTTTGTTTGTTGACTAAGATAGTCATCAATTGAGGATAAATAAAGATGCTTCAGACTTGGATTATTAAGACCGTCGAGGGTGTAATACCGTTTTATTTGGTTCTCAAAATGTTTTTGCAAATCTTTTTTGTTCAAAAACAACATTTAGCCGTGAAATATTCTTCTTACAGTTGATCTTTGATGTGACCAGGCGTACCAATGAATTTTCTATGTTTTTCACCAAGAAGTAACGGTATTGTTGTCTGATAGACTTGTTTTTGTCTATAATCTCCAAGAGAAGTCCACCATTCTTTTAGAACTCCTGAGAGTCGGGCCGTGAATTGTTGTATAATTTCAAAAATTTTTGAAGTTAAAGCTTCAGAAATTAACCACGCATGGAATTCATCTAAGCGATTATTCCACTGTTTGAAAGGAATATCATCAAATGTGAAAGTTATCACTTTTGACGAAAATTGTCTTGATCGTCCTTTATACTTGTGGAATGTTTGACGGCTTTTATCTCCGCTTTGGTTCATTTCTTCATCACTAGAGTCTACTTCGTACTTAGGATTTGATGAGGTTCCTTGATCTCCAATGGCAAATAAATTTGGCAGAGATTCTTCGTTGGATTCGTC