TBGR-Browse

Gene	Chromosome	Gene_start	Gene_end	Ath_gene	Identity(%)	E-value	Score
Rs501660	Rsa-R9	36922657	36925199	AT5G63110	91.966	0.0	898
Rs271060	Rsa-R5	39266354	39269811	AT5G64170	74.437	0.0	891
Rs304990	Rsa-R6	9258720	9262071	AT5G64960	85.078	0.0	869
Rs394200	Rsa-R7	6663715	6666588	AT5G64960	82.081	0.0	822
Rs351060	Rsa-R6	43073242	43076001	AT5G67180	75.482	2.73E-171	481

Flowering.rsa (v1.0)

Gene:

Rs501660

Chromosome:

Rsa-R9

Gene_start:

36922657

Gene_end:

36925199

Ath_gene:

AT5G63110

Identity(%):

91.966

E-value :

0.0

Score:

898

Annotation_abr. :

HDA6, RTS1

Annotation:

HISTONE DEACETYLASE 6, RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1

CDS:

>Rs501660

ATGGAGCCAGACGAGAGCGGCGTAGCTCTAGCCTCAGGTCCCGACGGACGCAAGCGCCGAGTCAGTTACTTCTACGAGCCGACGATCGGCGACTACTACTACGGCCAAGGACACCCCATGAAGCCCCACCGGATCCGCATGGCTCACTCCCTAATCGTCCACTACAACCTCCACCGCCGCCTCGAGATCAGCCGCCCTAACCTCGCCGACGCCTCCGACATCGGCCGGTTCCACTCTCCGGACTACGTCGATTTCCTCCGCTCCGTCTCGCCGGAGTCCATGGGCGATCACTCCGCCGCGCGGAACCTGAGGCGGTTCAACGTCGGCGAGGACTGTCCCGTGTTCGACGGGCTATTCGACTTCTGCCGCGCTTCCGCCGGGGGCTCGATCGGCGCCGCGGTTAAGCTGAACCGGCAGGACGCGGATATCGCGATCAATTGGGGCGGTGGGCTCCACCATGCGAAGAAGAGCGAAGCCTCGGGGTTTTGTTATGTGAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGAGAGTTCTCTACATTGATATCGATGTGCACCACGGAGATGGAGTAGAAGAAGCGTTTTACACAACCGATAGAGTTATGACTGTTTCTTTTCACAAATTCGGCGACTTTTTCCCAGGAACTGGTCACATCAGAGACATTGGCGCTGAGAAAGGGAAATACTACGCTCTAAATGTTCCGTTAAACGATGGCATGGACGATGAGAGTTTCCGCAGCATGTTTAGACCTCTTATCCAGAAGGTTATGGAGGTGTACCAGCCAGAGGCAGTTGTTCTTCAGTGTGGGGCTGACTCCTTAAGCGGTGATCGTTTGGGTTGTTTCAACTTATCAGTCAAGGGTCATGCTGATTGCCTCCGGTTCTTGAGATCTTACAACGTTCCTCTTATGGTCTTGGGTGGTGGAGGGTATACTATTCGAAATGTTGCTCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAACAAGCTCCCTTACAATGAGTACTTTGAGTATTTTGGTCCAGACTATACGCTTCATGTCGATCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAAGATAAGGAACACATTGTTAGAGCAACTGTCGGGACTAGTACATGCACCTAGCGTGCAGTTTCAGCACACACCTCCAGTGAATCGAGTTTTGGATGAGCCGGAAGAAGACTTGGAGCAAAGACCAAAGCCTCGGATTTGGAGTGGAACTGCAAGTTATGAATCAGACAGTGACGATGATGAGAAATCACCACCTCTTGTTGGTTTCTCAGGTATTGATAACCCACCTATGGACAGGGACTCTACTGGTGAAGATGATATGGAAGATGAGCCGGAAGTGAATCCACCATCCTCCTAA

Pro:

>Rs501660

MEPDESGVALASGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPNLADASDIGRFHSPDYVDFLRSVSPESMGDHSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGAEKGKYYALNVPLNDGMDDESFRSMFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPGPMENLNTPKDMEKIRNTLLEQLSGLVHAPSVQFQHTPPVNRVLDEPEEDLEQRPKPRIWSGTASYESDSDDDEKSPPLVGFSGIDNPPMDRDSTGEDDMEDEPEVNPPSS

Flowering.rsa (v1.0)

Gene:

Rs271060

Chromosome:

Rsa-R5

Gene_start:

39266354

Gene_end:

39269811

Ath_gene:

AT5G64170

Identity(%):

74.437

E-value :

0.0

Score:

891

Annotation_abr. :

LNK1

Annotation:

NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED 1

CDS:

>Rs271060

ATGTCAGACTTGTGCTTTGATCAGCTGGACAATAATACTTCAGACGAGTTTTATGGTAACGATGATGGTATAGTGCCAAACTCGGCGTACGAGGCCAGTAGCAGGAAGAAACAAAGACATGAAGATAGTGGTAGCGGAAAAAACCACTTAAAGAGTAATACTTTTATCAAGAGGCAGGGCGATATGTTAGGAAGAAATCCCTGGTCTGAGAAAAATAGTGCCGTCTCTCCGGTTTCTCGTGACGCCGGATCAGACAAAGATGTTCAGGATATGACACTAGAGGATGCAAAGATATCAGATCATGGTTTCAACGGTGGCAACGTCAACGTGGCTGGGAATTTCTGCTCTGCGGATCCCATGTTGTGTGACAGTTCCACTGCAACACATAATGGCGTGTATAATAATTATTCCGTCAACAGCGTTCCAGATGCTGAAAATAACCTCAGTTTCTTGAATAGTGGAGATAAAGAAAGCAATGATCTCTTCTACGGATGGGGTGATATTGGAAATTTTGAAGATGTGGACCATATGCTTAGGAGCTGTGATTCAACTTTCGGGTTGGAGAGTATTAATAATGAAGATAACTTGTGCTGGTTCTCTTCTGCTCAGCCAAATGAGGATACAGACATTGCGATGACAGATGATACAAAACCAGACACAATGTTGGGAAACCAAAGGACACCTTTGTTGCAGGTGGAGGACTTTCTGAACAATGGCGAGTCCAACCATACTGTTGAAGATGAATATGGTGGTTATACCGCTGTCAGCGGCTCAGCTCAAGGAAACTCTTCAGTAAAAGGATATGATACAAATTTGCAGAAGAGTGATATATTGATGCTGGATGAAGAGGCTAATCTTGAAAAGAAGCAGACTGGTCATCTTCATAATCTTGATGGGTACTCGGGTAACAGTTTTACGTTACAGAACAGCGGTATTTCCAGTGAACAAATGGACACAAATCAGTATTATCCTCCCTCTGCATTCCAACAACCAGGTGTTCCATACTCGCATTTCAATTTTGAGCAGCCTTCACATCAAGTATCAGCATGTGAAAGTAATTCTGGTACCAAATCTGAGAACAAACCCAATCCTTCCTCTGCTTCAAATGAGTCATACACATCAAATCAGGCACAATCTGTCGAGAGCTTGCAAGGTCCAACTGTTGATGATCGGTGTAGGAAGGGATTTGAGAAGAGAGTTAGCTTGCAGGCCGGGCAAGATTTGGCTCCTTATGCCGCAAGTACCAGGAAGAGTACTAAGACAAACCCATTGGTGTTTCCTTATGCTGCTCCGATCCCAAAGATCGGGCTTGAGGATGACCACAGAAAAGTTGCAGCTAAAGTGGAAACATCAAACAGGCAAGAAAGTTCATGTGTTAGCTCTGTAGTTCAAGACATTTCACTGGAGGCAACAAGTTTTCGCCATCTTCAACAAGTTATAGAACAGTTGGATGTTAGGACGAAGCTTTGCATAAGGGACAGCTTATACCGATTGGCAAAAAGCGCCGAGCAGAGACATCATTGTATGGATGCAAATGGTGGAAACGGACAGGTGAAAGGTGCTGGCTCGCATCTCGAGACTAGTGAAACAGACAAGTACGTGGGATTCTTGGATATAGAAACTGATACAAACCCGATAGACCGATCCATTGCTCATTTGCTGTTTCATAGACCCTCAGACTCATCTCTTTCATCAGATCACGATGTTCTCTCTTATAAATCCCATCCAATGATTCCTCAGCCCAACAATAGTCCGAGCCTGAGGATAGAGAACCAAGAGGAAACCCAAGAACTTAGAACCGAAGCTGTAGCAAGTGACAACAAGTAG

Pro:

>Rs271060

MSDLCFDQLDNNTSDEFYGNDDGIVPNSAYEASSRKKQRHEDSGSGKNHLKSNTFIKRQGDMLGRNPWSEKNSAVSPVSRDAGSDKDVQDMTLEDAKISDHGFNGGNVNVAGNFCSADPMLCDSSTATHNGVYNNYSVNSVPDAENNLSFLNSGDKESNDLFYGWGDIGNFEDVDHMLRSCDSTFGLESINNEDNLCWFSSAQPNEDTDIAMTDDTKPDTMLGNQRTPLLQVEDFLNNGESNHTVEDEYGGYTAVSGSAQGNSSVKGYDTNLQKSDILMLDEEANLEKKQTGHLHNLDGYSGNSFTLQNSGISSEQMDTNQYYPPSAFQQPGVPYSHFNFEQPSHQVSACESNSGTKSENKPNPSSASNESYTSNQAQSVESLQGPTVDDRCRKGFEKRVSLQAGQDLAPYAASTRKSTKTNPLVFPYAAPIPKIGLEDDHRKVAAKVETSNRQESSCVSSVVQDISLEATSFRHLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHCMDANGGNGQVKGAGSHLETSETDKYVGFLDIETDTNPIDRSIAHLLFHRPSDSSLSSDHDVLSYKSHPMIPQPNNSPSLRIENQEETQELRTEAVASDNK

Flowering.rsa (v1.0)

Gene:

Rs304990

Chromosome:

Rsa-R6

Gene_start:

9258720

Gene_end:

9262071

Ath_gene:

AT5G64960

Identity(%):

85.078

E-value :

0.0

Score:

869

Annotation_abr. :

CDKC;

Annotation:

CYCLIN-DEPENDENT KINASE C;

CDS:

>Rs304990

ATGGCGATTGCGGATTTTGGGCAATTGAATATGGAGGAGCCCCCTCCGTTCTGGGGATCTCGTGGCGTCGATTGCTTCGAGAAGCTTGAACAGGTCGGCGAAGGAACTTACGGTCAAGTATACATGGCTAGAGAAATTAAAACTGGGGAGATCGTGGCTCTTAAGAAGATCCGTATGGACAATGAAAGAGAAGGGTTTCCCATCACAGCCATCCGTGAAATCAAAATTCTGAAGAAGCTGGATCATCCAAACGTCATTCACTTGAAAGAGATTGTTACTTCCCCTGGTCGAGATAGGGACGATCAAGGAAAGCCAGATAATAACAAATACAAGGGCGGAATCTACATGGTCTTTGAGTACATGGATCATGACTTGACCGGACTTTCTGATCGTTCTACTCAGGGATTTACTGTTCCTCAGATCAAGTGTTACATGAAGCAACTGCTCACTGGGCTTCACTATTGCCATATTAAAAAAGTTCTTCATCGTGATATTAAAGGTTCCAACCTCCTTATTGACAATGAGGGAAACTTAAAGCTTGCGGATTTTGGGCTTGCACGGTCCTATTCTCATGATCACGATGGAAATCTTACAAACCGTGTCATCACGTTGTGGTATAGGCCCCCTGAATTGTTACTCGGTGCCACAAAATATGGACCAGCGATTGACATGTGGTCAGTTGGTTGCATATTTGCTGAGCTTTTGAATGGGAAACCAATCTTGCCTGGCAAAACTGAGACTGAACAATTGACTAAGATTTATGAACTCTGCGGATCTCCTGATGAAAACAACTGGCCTGGTGTTTCGAAGATGCCTTGGTTTGACCAACTGAAATCACCTCGGCCCTTGAGAAGACGTTTAAGGGATATCTACCGAAACTTTGATCGCCATGCCCTTGAACTACTGGAAAGAATGTTGGTGCTTGACCCGTCTCAGAGAATATCTGCAAAGGATGCTCTTGATGCAGATTACTTTTGGACTGATCCGTTGCCGTGTGATCCAAAGAGTCTACCCAAATATGAATCATCACATGAGTTCCAGACAAAGAAAAGGCGGCAAGAGATGCGTCATAATGAGGAAGCAGCCAAAAAACAGAAAATGCAGCATCCGCAGCAACACTCTCGTTGGCCTCCACAGCAACACGGTGTTGGTCAGGCTCATGCCGCTCCACACTGGCCTGCTGGACCGAACCACCCTATTAACAACGGACCACCACCTCAACTACCTGCTGGTGGACCTAGTGGTCATCACTATTATCAGAATCCCCGTGGCCCCGCACCTGCTTCAAACGGGTACCAGACTGGAGGGTATAATAATCGGAGCCGTGGAGGTTATAGCAGCGGATCATACCCTTCACAAAGTCGAGGTGCACCTTATGGCGCTGGTCCTAACGGTGGCTATGGTGTTAGACCGCCCAACTACTCACAAAATGGCGGTCAGTTTAGTGGCTCTGGAAGAGGACAGAACCCAATGGGTGGTGCTAGAAACCAACGATATGGAGGATGGCAATAA

Pro:

>Rs304990

MAIADFGQLNMEEPPPFWGSRGVDCFEKLEQVGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLDHPNVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLSDRSTQGFTVPQIKCYMKQLLTGLHYCHIKKVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHDGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLNGKPILPGKTETEQLTKIYELCGSPDENNWPGVSKMPWFDQLKSPRPLRRRLRDIYRNFDRHALELLERMLVLDPSQRISAKDALDADYFWTDPLPCDPKSLPKYESSHEFQTKKRRQEMRHNEEAAKKQKMQHPQQHSRWPPQQHGVGQAHAAPHWPAGPNHPINNGPPPQLPAGGPSGHHYYQNPRGPAPASNGYQTGGYNNRSRGGYSSGSYPSQSRGAPYGAGPNGGYGVRPPNYSQNGGQFSGSGRGQNPMGGARNQRYGGWQ

Flowering.rsa (v1.0)

Gene:

Rs394200

Chromosome:

Rsa-R7

Gene_start:

6663715

Gene_end:

6666588

Ath_gene:

AT5G64960

Identity(%):

82.081

E-value :

0.0

Score:

822

Annotation_abr. :

CDKC;

Annotation:

CYCLIN-DEPENDENT KINASE C;

CDS:

>Rs394200

ATGAATATGGTGGTGGCAGATCAAGGGAAGCTAAACCTAGAGGAGCCTCCTCCGCTCTGGGGATCTCGCAGCGTTGATTGCTTCGAGAAGCTCGAACAAATCGGCGAAGGAACTTACGGGCAAGTTTTCATGGCTAAAGATATTAAGACTGGTGAAATCGTGGCTCTTAAAAAGATCCGTATGGACAATGAAAAAGAAGGGTTCCCTATAACTGCTATCCGTGAGATAAAAATTCTCAAGAAGCTGCATCATGAGAATGTCGTTGAGCTTAAAGAGATTGTGACTTCACCAGGTCGGGACACAGATGACCAAGGAAAGCCAGATAACAACAAATACAAGGGAGGCATCTATATGGTTTTTGAGTACATGGATCATGATTTGACTGGACTCGCTGATCGTCCTGGACTCAGATTTACTATTCCTCAAATCAAGTGTTACATGAGGCAACTACTCACGGGGCTTCACTATTGTCATGCTCACCAAATTCTCCACCGTGATATAAAAGGCTCAAATCTCCTCATTGACAATGAGGGACAGCTAAAGCTAGCCGATTTTGGGCTTGCAAGGATGTATTCTCAGGATCATTCTGGAAACCTCACAAATCGTGTCATCACCTTGTGGTATAGGCCCCCTGAGTTACTGCTAGGGGCCACAAAATATGGCCCAGCGATTGACATGTGGTCCGTTGGTTGCATATTTGCTGAACTTTTGTATGCAAAACCAATCCTACCTGGGAAAAATGAGACTGAACAGTTGAACAAGATTTTTGAGCTTTGTGGATCACCTGATGAAAATAATTGGCCTGGGGTTACCAAGATGCCTTGGTTTAACAATTTTAAGCCATCACGGCCATTGAAGAGACGCGTTAGAGAGTTCTTCGGACAGTACCAAGTCTTTGATCGCCATGCACTTGAACTACTGGACAAAATGTTGGTGCTTGACCCATCACAGAGAATAACTGCAAAGGATGCTCTTGATGCCGAGTACTTTTGGACTGATCCTCTTCCATGTGACCCAAAGAGTCTACCCACATATGAGGCATCGCATGAGTTCCAGACAAAGAAAAAGCGGCAAGAGCAGCGTCAAAGAGAGGAAGCAGCAAAAAGACAGAAAGTGCATCATCCACAGCAGCAGCACTCTCGCTTGCCTCCGTTGCAACACGGTGGCCAATCTCATGCTGCTCCACATTGGCCTGCCCATCCTACTAACAACGCACCACCACAAGTACCTGCTGGACCTAGCCACCACTTCTATGGGAAGCCGCGTGGTCCACCTGGTCCAAATCGGTACCCTCCTAGCGGAAACCAGAGCAGGGGTTATAATCAGAGCCGGGGAGGTTACAGCAGCGGGTCATATCATCAACAAGGACGGGGAGCTCCTTATGTGGGCGGTGGTCCTAGAGGGCCTAGTGGTGGTGGTGCCTACGGGGTTGGACCACCTAACTACACACAAGGTGGTCAGCATGGTGGCTCAGGAAGAGGTCAGAACACAATGGGTGGTAGTAGAAACCAGCAATACGGATGGCAACAGTAA

Pro:

>Rs394200

MNMVVADQGKLNLEEPPPLWGSRSVDCFEKLEQIGEGTYGQVFMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNETEQLNKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKVHHPQQQHSRLPPLQHGGQSHAAPHWPAHPTNNAPPQVPAGPSHHFYGKPRGPPGPNRYPPSGNQSRGYNQSRGGYSSGSYHQQGRGAPYVGGGPRGPSGGGAYGVGPPNYTQGGQHGGSGRGQNTMGGSRNQQYGWQQ

Flowering.rsa (v1.0)

Gene:

Rs351060

Chromosome:

Rsa-R6

Gene_start:

43073242

Gene_end:

43076001

Ath_gene:

AT5G67180

Identity(%):

75.482

E-value :

2.73E-171

Score:

481

Annotation_abr. :

TOE3

Annotation:

TARGET OF EARLY ACTIVATION TAGGED 3

CDS:

>Rs351060

ATGTGGAACCTTAACGACTCACCCGATCACCACGAAGAATCCGACGGTAGATGGAATCGGGCTGGAGATGTACCAATCTCTATGAGCTCATCGGACATGTGGCTGTTGTCTGCTCCTCCGGTGACCCGGAATTTTTTTCCCAGTCAAATCATGGAACAAGAAGTTCCAGGATTAATATCTGGTTCCGGTTTCAATAGAAACCAATGTCTTGTTCGGTCGGATCCTAGTGGGTCTGCTCGTCCGGAAAACCTAGAGCTGGAGATAACACCGCCTGTAAAAAAGAGCCGACGTGGTCCTCGCTCACGGAGCTCTCAGTATAGGGGAGTTACTTTTTACCGACGAACCGGAAGATGGGAGTCACATATATGGGACTGTGGGAAGCAAGTGTACTTAGGTGGATTTGACACCGCACATGCCGCTGCTCGTGCCTATGATAGAGCCGCAGTTAAGTTTAGAGGCGTAGATGCAGATATCAATTTCAATATTGAAGACTACGTGGAAGATGTGAAACAGATGAGCAGTCTGACAAAGGAAGAGTTCATGCATGTCATTAGAAGGCAAAGCACTGGGTTTCCAAGAGGCAGTTCAAAATATAGAGGAGTCACTTTGCATAAATGTGGAAGATGGGAGGCTCGATTGGGTCAATTTCTCAACAAAAAGTACGTTTATTTGGGTCTCTTTGATACCGAGATGGAAGCTGCAAGGGCATACGATAAAGCAGCAATAAAGTCTAATGGAAAAGATGCAGTTACCAATTTTGACCCTAAAGTATACGAGGAAGAGCATAATAGCCAAGAGAAGCAGTGGAATGATCATAGCCTTGATCTATGTCTAGGGGAATCAAACTCGGAAGAGTTTGGAACCAAATCCGAGATTGGGAGCATGAGAAATGGATTTAGAGACGAGGAGAGACTGTTAGGAAGCCATCTCTCGCTAGCGATGACGACAACCGCGACTGTCGGATCGGATAAGCAGTTGGACGGTGGAGGAAAGCGAGTGGGAATGGCGGCATCATCAGGATTCTCTCCTCGCTTTCCTCCTTGGAACCACCACACTCCTCGCACCTTCCACTTCTTTCGTCCCTGA

Pro:

>Rs351060

MWNLNDSPDHHEESDGRWNRAGDVPISMSSSDMWLLSAPPVTRNFFPSQIMEQEVPGLISGSGFNRNQCLVRSDPSGSARPENLELEITPPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAVKFRGVDADINFNIEDYVEDVKQMSSLTKEEFMHVIRRQSTGFPRGSSKYRGVTLHKCGRWEARLGQFLNKKYVYLGLFDTEMEAARAYDKAAIKSNGKDAVTNFDPKVYEEEHNSQEKQWNDHSLDLCLGESNSEEFGTKSEIGSMRNGFRDEERLLGSHLSLAMTTTATVGSDKQLDGGGKRVGMAASSGFSPRFPPWNHHTPRTFHFFRP