TBGR-Browse-Chi-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
Chr4_rRNA_41	Retrotransposons	Ret_other	rRNA	114	106214	106327	+
Chr4_rRNA_42	Retrotransposons	Ret_other	rRNA	117	109945	110061	+
Chr5_rRNA_43	Retrotransposons	Ret_other	rRNA	354	1600	1953	+
Chr5_rRNA_44	Retrotransposons	Ret_other	rRNA	205	2062	2266	+
Chr5_rRNA_45	Retrotransposons	Ret_other	rRNA	523	2353	2875	+
Chr5_rRNA_46	Retrotransposons	Ret_other	rRNA	558	3227	3784	+
Chr5_rRNA_47	Retrotransposons	Ret_other	rRNA	291	14494	14784	+
Chr5_rRNA_48	Retrotransposons	Ret_other	rRNA	285	14782	15066	+
Chr5_rRNA_49	Retrotransposons	Ret_other	rRNA	269	15044	15312	+
Chr5_rRNA_50	Retrotransposons	Ret_other	rRNA	234	15986	16219	+
Chr5_rRNA_51	Retrotransposons	Ret_other	rRNA	272	16478	16749	+
Chr5_rRNA_52	Retrotransposons	Ret_other	rRNA	272	18271	18542	+
Chr5_rRNA_53	Retrotransposons	Ret_other	rRNA	129	19408	19536	+
Chr5_rRNA_54	Retrotransposons	Ret_other	rRNA	119	26186	26304	+
Chr5_rRNA_55	Retrotransposons	Ret_other	rRNA	83	752044	752126	-
Chr6_rRNA_56	Retrotransposons	Ret_other	rRNA	201	2186796	2186996	+
Chr7_rRNA_57	Retrotransposons	Ret_other	rRNA	247	12152	12398	+
Chr7_rRNA_58	Retrotransposons	Ret_other	rRNA	83	12522	12604	+
Chr7_rRNA_59	Retrotransposons	Ret_other	rRNA	1015	12672	13686	+
Chr7_rRNA_60	Retrotransposons	Ret_other	rRNA	249	18198	18446	+

Cardamine hirsuta (v1.0)

ID:

Chr4_rRNA_41

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

114

Start:

106214

End:

106327

Strand:

+

>Chr4_rRNA_41

AAAAAATGACGGTCAAGACCTTGTCCCACTCTCAATTTCCTTTGCGTTTGCGAGAATGTGGCGAGGGATTTCTGTGATCAATGAATGCTACCTGGTTGATCCTGCCAGTACTCA

Cardamine hirsuta (v1.0)

ID:

Chr4_rRNA_42

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

117

Start:

109945

End:

110061

Strand:

+

>Chr4_rRNA_42

AGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGGTCAGATACCGTCCTAGTCTCAACCATAAACGATNCCAACCAGGGATCAGCGGATGTTGCTTATAGAACCC

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_43

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

354

Start:

1600

End:

1953

Strand:

+

>Chr5_rRNA_43

CTTTGTGCTGGCGACGCATCATTCAAATTTTTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGTTAATGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATATCGGGCTCTTTGAGTCTGGTAATTGGAATGAGTATAATCTAAATCCCTTAACGAGGATCCATTGGAGGGAAAATCTGGTGCCAGCAGGCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAATCGGCTCGT

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_44

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

205

Start:

2062

End:

2266

Strand:

+

>Chr5_rRNA_44

ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTAGATTTATGAAAGACGAACAACTGCAAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAGCAAAATTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAAACGATGCCGACCAGGGATCAGCGGATGTTGCTTATA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_45

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

523

Start:

2353

End:

2875

Strand:

+

>Chr5_rRNA_45

TTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGACCGTTCTTAGTTGGTGGAGCGATTTGTCTGGATAATTCCGTTAACGAAAGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCTTTCACGGCCGGCTTCTTAGAGGGACTATGGCCATTTAGGCCAAGGAAGTTTGAGGCAATAAAAGGTCTGTGATTCCCTTAGATGTTCTGGGCCGCATGCANTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCCTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCATTGACTACGTCCCTAACCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAGTGTTCGGATCCCGGCGATGTGGGTGGTTCGCCGCCTGCGATGTCGCGAGAAGTCCGCTAAACCTTATCATTTAGAGGAAGGAGAAGTTGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATCATTGTCGAATCCTGT

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_46

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

558

Start:

3227

End:

3784

Strand:

+

>Chr5_rRNA_46

GCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGCAGAAGAAATTAACAAGGATTCTCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTAAAAATCGAATGTCTTTGGCATTCGAATTGTAGTCTGGAGAAGCGTCCGCAGCGACGGACCGGGCTCAAGTTCCCTGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCTGTTGTGCCCGGACCCTGTCGCACCACGAGGCACTGTCTACGAGTCAAGTTGTTTGGGAATGCAGCCCCAATCAGGCGGTAAATTCCATCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCCGCAAGGTAAAGATGAAAAGAACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGTCCCATCGATGCATCCCAGTCGGATGCGGAATGGAGCAATCCGGTCCGTCGATCGATTCGGGGAATGGACCGATGTGGATTATGGTGGTGGTCTAAGCCCGTGCTTTTGATTCGCTCGTGGAGACGTC

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_47

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

291

Start:

14494

End:

14784

Strand:

+

>Chr5_rRNA_47

GACACGTTGCTGCCGTGATCGTGGTCAGCAGCACGCGCCTTAATGGCGTGCCTTGGCATCTGCGTGCTCTGGGCGTCGGCATGTGGGTTCCCCATTCGATCCGTCTTGAAACAAGGACCAAGGAGTCTGACATGTGTTTGAGTCAACAGGTGAGTAAACCCGTAAGGCGCAAGGAAGCAGATTGGCGGGATCCCATATGGGTGCACCGCCGACTGACCTTGATCATCTGAGAAGGGTTCGAGTGTGAGTATGCCTCTCGGGACCCAAAAGATGCTGAACTATGCCTGAACG

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_48

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

285

Start:

14782

End:

15066

Strand:

+

>Chr5_rRNA_48

ACGTCGCTGCCGTGATCATGGTCAGCAGCACGCGCCTTGGCATCTGCGTGCTTTGGGCGTCGGCCTGTGGGTTCCCCATTCGACCCATCTTGAAACACGGACCAAGGAGTCTGACATGTGTGTGAGTCAACGGGTGAGTAAACCCATAAGGCGCAAGGAAGCAGATTGGCGGGATCCCATATGGGTGCACCGCCGACTGACCTTGATCATCTGAGAAGGGTTCGAGTGTGAGCATGCCTCTCGGGACCCAGAATATGCTGAACTAAGTCAGAATCCGGGCTAGAG

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_49

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

269

Start:

15044

End:

15312

Strand:

+

>Chr5_rRNA_49

CTAAGTCAGAATCCGGGCTAGAGGTGACGCATGCGCCCGCCGCCCGATTGCCGACCCTCAGTAGGAGCTTCAGCTCCCAAAGGCCACGTGTCGTTGGCTAAGTTCGTTCGGTGAAAGCGCCGTTCGGACCGCCTTGAATTATAATTACCACCAAGCGGCAGGTGGAATCCATTGAAGACGACTTCAATACGTGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCAAGATCTACTGAGATTCAGCCCTTTGTTACTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_50

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

234

Start:

15986

End:

16219

Strand:

+

>Chr5_rRNA_50

GCCTCTAAGTCAGAATCTGGGCTAGAAGCGACGCATGCGCCCGCCGCCCGATTGTCGACCCTCAGTAGGAGCTTCGGCTCCCAAAGGCACCTGTCGTTTGCTAAGTTCTTTCAGTAAAAGCGCCATTCGGACCGCCTTGAATTATAATTACCACCAAGCGGCGGGTGGAATCCATTGCAGATGACTTAAATACACGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCCACTAC

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_51

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

272

Start:

16478

End:

16749

Strand:

+

>Chr5_rRNA_51

GCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGCCCGATTGCTGACCCTTAGTAGGAGCTTCGGCTCCCAAAGGCACGTGTCGTTGGCTAAGTTCGTTCGGTGAAAGCACCGTTCGGTCCGCCTTGAATTATAATTACCACCAAGCGGCAGGTAGAATCCTTTGCAGACGACTTAAATACGTGACAGGGTATTGTAAGTGGCAGAGTGGCCCTGCTGCCAAGATCCACTGAGATTCAGCCCTTTGTTGCTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_52

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

272

Start:

18271

End:

18542

Strand:

+

>Chr5_rRNA_52

GCCTCTAAGTAAGAATCCAGGCTAGAAGTAAAGCATGCGCCCGCCGCCCGATTGCCGACCCTTAGTAGGAGCTTCGGCTCCCAAAGGCATGTGTCGTTGGCTAAGTTTGTTCATTAAAAGCGTCGTTCGGCCCGCCTTGAATTATAATTACCACCAAGCGGCGGGTAGAATCCTTTGCAGATGACTTAAATAAGTGACGGGGTATTGCAAGTGACAAAGTGGCCTTGAAGCCACGATCCACCAAGATTCAGCCCTTCGTCGCTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_53

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

129

Start:

19408

End:

19536

Strand:

+

>Chr5_rRNA_53

ATAATTTCCACGAAGCGGCGGGTAGAATCCTTTGCAGACTACTTAAATACACGACAAAGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_54

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

119

Start:

26186

End:

26304

Strand:

+

>Chr5_rRNA_54

CCGAGCGGCTGGTAGAATCCTTTGCAGACAACTTAAATACGCGACGGGGTATTGTAAGTGGCTGAGTGGCCTTCCTGCCACGATCCACTGAGATTCAGCCCTTTTTCGCTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr5_rRNA_55

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

83

Start:

752044

End:

752126

Strand:

-

>Chr5_rRNA_55

GTTCTTTTCACCCTTCCCTCACGGTACTATTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCACCAGTCGA

Cardamine hirsuta (v1.0)

ID:

Chr6_rRNA_56

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

201

Start:

2186796

End:

2186996

Strand:

+

>Chr6_rRNA_56

GTACCATTGGCTAAGTCCATTCCGTGGCAGTGGAAATTGCCTCGAAATTATAGTTATCATCAAGCAGTTGATACTTGATAACAATTTTTTAAGGCGATTTAAATATGAAATGAGCTCTAATAAATAGCAAAGTGGGTTTGTTACTTGCCAGTTGCCACAATTTACAATCCATTTAGACGTAGTCTTGTTTTCGTTAAGATT

Cardamine hirsuta (v1.0)

ID:

Chr7_rRNA_57

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

247

Start:

12152

End:

12398

Strand:

+

>Chr7_rRNA_57

GGAAACAGCTTCTCCGAGAGCTTTCCCCAGGCATCGAACAGTCAGCTCAGAACTGGTACGGAAAAGGGGAATCTGACTGTTTAATTAAAACAANGCATTGCGATGGTCCTCGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAAGCAAGCGCAGGTAAACGGCGGGAGTAACTATGATTCTCCTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGA

Cardamine hirsuta (v1.0)

ID:

Chr7_rRNA_58

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

83

Start:

12522

End:

12604

Strand:

+

>Chr7_rRNA_58

CATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGATTCA

Cardamine hirsuta (v1.0)

ID:

Chr7_rRNA_59

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1015

Start:

12672

End:

13686

Strand:

+

>Chr7_rRNA_59

AACGGGCTTNGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGTTTTGGCAATAGTGAATAACCACTACTTTTAATGTTATTTTACTTACTCCGTGAATCGAAGGCGGGGTACAACCCCTTCTTTTGGTCCTACGGCTCGCTTCTGCGGGTCGATCCGGGCGAAGGACATTTTCAGGTTNGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGATCTTTTGATTCTGATTTTCAGTACAAATACGAACCATAAAAGTGTGGCCTACCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTAGTGGCAGCCAGGCGTTCATAGCGACGTTGCTTTTTGATCCTTCAATGTCGGCTCTTCCTATCATTGTGAAAAAGAATTCACCAAGTGTTGGATTATTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTAAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTGAACCTAGTACGAGAAGAACCGTTGATTCGCTTAATTTGTCATCATGCTTGGTTGAAAAGCCAATGGCATGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGTGCCCGCCGCCTGATTGCCGACCCTCAATAGGAGCTTCGGCTTCCAAAGGCATGTGACGTTGGCTAAGTTCATTCGGCGGAAGCCCCGTTCGGACTGCCTTGAATTATAATTACCACCGAGCGGCGGGTATAATCCTTTGCATACGACTTAAATAAGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGGTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTAAGATTCGA

Cardamine hirsuta (v1.0)

ID:

Chr7_rRNA_60

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

249

Start:

18198

End:

18446

Strand:

+

>Chr7_rRNA_60

ACAGTCGGGGGCATTTGTATTTCATAGTCAGAGGTAAAATTCTTGGATTTNTGAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGCTCAAAGACGAAAGTTGGGGGCTCAGATACCGTCCTAGTCTCAACCATAAACAATGCTGACCAGGGATCAGCGGATGTTGGTTATAGGACTCCGCTGGCACCTTATGAGAAATCATAGTTTTTGGGTTCC