ID Class Order Superfamily Length Start End Strand View
Scaffold2381_SINE_21 RetrotransposonsSINESINE855099951083+
Scaffold27505_SINE_22 RetrotransposonsSINESINE30698403-
Scaffold27505_SINE_23 RetrotransposonsSINESINE3039881290-
Scaffold29223_SINE_24 RetrotransposonsSINESINE6953521046+
Scaffold29223_SINE_25 RetrotransposonsSINESINE48417212204+
Scaffold4770_SINE_26 RetrotransposonsSINESINE4666091074+
Scaffold6879_SINE_27 RetrotransposonsSINESINE184578761-
Scaffold6879_SINE_28 RetrotransposonsSINESINE2527681019-
Scaffold7720_SINE_29 RetrotransposonsSINESINE65435734226-
Scaffold8440_SINE_30 RetrotransposonsSINESINE15646864841+

< 1 2 > Total 2


Capsella grandiflora (v1.1)

ID:

Scaffold2381_SINE_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

85

Start:

50999  

End:

51083

Strand:

+

>Scaffold2381_SINE_21

ATGATCCTTCGTCGTGACCGCAAAACTGTAATTCTTGAGCCCGCCAGATTTAATGCTCCGGTTATCTTGCCGCCGACGATTAACA

Capsella grandiflora (v1.1)

ID:

Scaffold27505_SINE_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

306

Start:

98  

End:

403

Strand:

-

>Scaffold27505_SINE_22

GATCCCCGTAACTAGCCAtcaagaatatggtaaCAGATCAACCGTTAATCTGTTCGTAAAGTGGTCAAACCACCGGTTTGAAGCTCAACTTGCGCCGCAAGACAGATCTTTCGCTCACAAGTCACTTAGCCAAGAGATGTCTGATCCAGATCCGCCAAAGCCTTCAACAAGCAGATCGaaggaacatcatctcaggacaccgtgaaagagagaaatcgtctggcatcgaacgacagatccaaccacgccttacaccaccatagaagagaagtgcccaccacctgctttaatccccgCCCATCGGCC

Capsella grandiflora (v1.1)

ID:

Scaffold27505_SINE_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

303

Start:

988  

End:

1290

Strand:

-

>Scaffold27505_SINE_23

GATCCCCGTAACTAGCTGTCAAGGATATGGTCATAGATCAACCGTTATCTGTTCACAAATTGGTCAACCCACCGGTTTGAAGCTCAACTTCCGCCGCAAGACAGATCTATcgctcacaatcactaagccaagagaagtctgatccagatccgccaaatccttcaaccagtagatcgaaggaaaatcatctcaggacgtcgtgaaagagagaaatcgtctggcatcgaacgacagaTCCAACCACGCCTTACACCACATAGAAGAGAAGTGCCCACCACCTGCTTTAATCCTTGCCCATCGGCC

Capsella grandiflora (v1.1)

ID:

Scaffold29223_SINE_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

695

Start:

352  

End:

1046

Strand:

+

>Scaffold29223_SINE_24

cggctaatgggcaggGAATAAAGCAGGTGGTGGGGGCTTCTCTTCTATGGTGGTGTAAGGCATGGATGGAACTGTCGTTCGATGTCAAACGATTTCTCTCTTTCACGGCGACctgagatgatgTTACTGCGATTTGCTGGTTAAAGGCTATGGCGGATCTAGATCAGATTTCTCTTGCCTAAGTTGCTTGTGAACGGTAGATCTGTCTTGCGGCGGAAGTTGAGCTTCAGACCGGTGGgttcaccacttTGCGAACAGATTAACGGTTGATCTATGACCAATTCCTTGATGGCAAGTCACATGTATCCTTAACCAGATTTTGATGGTATATGGCTTGCTTGAGCTAGCATCCATCCTCCATCTCCGTGATTAGTTTTCTGTTCGCCGGATCGgaagggaggttGCTTTGGAAGTAAAGGTAAGTGTTATACGTTGGAATAGAGGGTTTGTTGCAAGGCCTCTTTTTGTTAGGCCCGCGAGAAGAAGGTATTGGATCTCTGGTTATGGCGGATCTTTTTTTCCAAAAGGAAAGTTCCGGGTTGGGTTTGACCTCAATGACCATTTGTGGCGGGGTTTGCGAGCtatagcctaagAATTGATGTCAAGTCTTAGTCACAGACCAGCCGTCCTTGCTAGAAACAGATTTAGCAGGTAAATTGTGTTTGCGGTGTACTGCTGTTTTCAGATCTCTTTTC

Capsella grandiflora (v1.1)

ID:

Scaffold29223_SINE_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

484

Start:

1721  

End:

2204

Strand:

+

>Scaffold29223_SINE_25

GGCTGATGGgaagggattaaagtaggtggtgggcgcttctcttctatggtggtgtaaggcgtggTTGGATCTGTCGTTCGATGCCAGACGATTTCTCTCTTTCACGGCGACATGAGATGACGTTCATGTGATTTCCTGGTTAAAGGCTATGGCGGATCTGGATCGGTTTCTATTGGCTAAGTGGCATGTGAGCGGTAGATATGTCTTGCAGAGGAAGTTGAGCTTTAGACCGGTGGgttcaccagtttgccaactgagcgacggttgatctgtgaccacatccttgatggctagtcacaggtatccttaaccggatttttatgattggtggcttgcttgagctagcgtccgtaatccaccgccgtgattggttttGGGTTCTCCAGATCGGAAGGGAGGTTGCTTTGGAAGTAAAGGTAAGTGTTATATGTTTGATCAGAGGGTTTGTTGCTAAGCTTCTTTTTGCTAGGTCGAGGAGAAGAAG

Capsella grandiflora (v1.1)

ID:

Scaffold4770_SINE_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

466

Start:

609  

End:

1074

Strand:

+

>Scaffold4770_SINE_26

CATCCCCTTACTTTTTTCTCTTTGTTCTCTGATCTTCAACGGCGGCTCTTTTATGTCGAACCGTGTTGCAGAGGTGGGCTTCATCTCCTTTCCGGCGGCTTTGGGTGTGGTAGATCTGGTCTCAATGCATCTTGGAGGCTTCTTCCATCGTGGTTTGAGTTGCTTCTCCTTCATGGCTCTGGTCTTGTTAATTAGCACGAGAACACTGGCAGGAGTTTAGAGTGGCTACTCATGGCTCCGCGGCTAATGGTTTGGCTTTGAGAAGCGGCGAAAAGTCGAGATCTAGATTGGTGGGTTTGCTGCTTGTGAAGAGATTGACTGTGGATCTTGGAAAATCCTAGATGGTTAGTCATGGAGATCAAGAGCTGAAGGGTTGTTTGAGCCATcaaccgtcttCAGTCGCCATGATTTGGATTCGCTTTACCAGATTTAAGGATTGGTTTGCTCGAAAGGCTCAATGGTGAGC

Capsella grandiflora (v1.1)

ID:

Scaffold6879_SINE_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

184

Start:

578  

End:

761

Strand:

-

>Scaffold6879_SINE_27

GATCACCGTAACTAGccatcaaggatCTGGTCACAGATCAACCGTTAATCTGTTCGCAAAGTGGAGAACCCACCGGTTTGAAACTCAACTTCGACAGCAACACAGATCTATTGCTCACATGCCACTTAgccaagagaagTCTGATCCAGATCCACCAAAGCCTTCATCCAGCAGATCGAAGGAA

Capsella grandiflora (v1.1)

ID:

Scaffold6879_SINE_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

252

Start:

768  

End:

1019

Strand:

-

>Scaffold6879_SINE_28

CTGTTACTCTGTTTTCAAAGTGGTGAACCCACCGGTTTGAAGCTCATTTTCCGCCGCAAGacaaatctatcgctcacaagccacttagccaagagaattctgatccgtATCCGCCAAAGCCTTCAACCAGCAGATCGAAGGAACATCATCTCAGGTCGCCGTAAAAGAGAGAAATCGTCTAGCATCGAACGACAGATCCAACCACGCCTTACACCACTATAGAAAAAAGTGCCCACCACCTGCTTTAATCCC

Capsella grandiflora (v1.1)

ID:

Scaffold7720_SINE_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

654

Start:

3573  

End:

4226

Strand:

-

>Scaffold7720_SINE_29

CACCGGAAACGCAAACCTCACCTTTTAGATCCGACGCTAGCAAAGACGGCTCCTTTGCGACTACGAACTTGGCATCAAGCCATGACCGGAGCTAGCGAAACCCGTCGCAGGGCCTCACCGAGAAACAAATCAGACCCAAAACTTTCCTTTCAGAAGAGGGAAGAGGAGGATTCGCCACAAATCGAGACCCAATCGTCTAATCTCCTCGACCTAGAAAGAAAAGACCTTGCCACTAACCCTCAAATCCAGCAACGCACACCCTTGAGCTACTCATAAAGCATATTTCCTTCAGATCTGGCAAAGAGAAAACCATTCACGGCGGTAGGAGAAGGAAGCTGGCTAAAACAAACCCTCAGCCACCGATATCCAGGAAAGGAACGCCCGTGATTAGCCATCTAGGATCTGGCCAAAGATCCACCGTTAATTGCAAAGTGGTGAACCCACCAATCCGAAGCTTAACTTCCGCCGTAATCATATCTtaacttcataagctgtcGAGCCGAGAGAAAATTAAACCAGATCCGCCGTAGCCTTCAACCTGCATAGCTCTGAAACAAAATCTCATTGGGATTGTGAAGAGAGACACCGAATTGCATCAAGCCAAGAATGTAACCATGCCTCACACCACCGAAGATGAAAAGACACCCACCACTG

Capsella grandiflora (v1.1)

ID:

Scaffold8440_SINE_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

156

Start:

4686  

End:

4841

Strand:

+

>Scaffold8440_SINE_30

CGTCTTTGCTAGTGTTGGATCTAAAAGATGAGATTTGCGTTTTCCGGTGTACTGTCCATTTTCAGATCTCGTTTCCTATGGTCTCCGATATGGGTTTTTCTTTTATCATTATATGTTTTGGCCCGTTAACCTTCAAACCCGTTAGGAAATGATATA