ID Class Order Superfamily Length Start End Strand View
Scaffold8888_LTR-Cassandra_261 RetrotransposonsLTRLTR-Cassandra30761236429+
Scaffold8994_LTR-Cassandra_262 RetrotransposonsLTRLTR-Cassandra26626912956-
Scaffold8994_LTR-Cassandra_263 RetrotransposonsLTRLTR-Cassandra11329573069-
Scaffold9063_LTR-Cassandra_264 RetrotransposonsLTRLTR-Cassandra272676947-
Scaffold9063_LTR-Cassandra_265 RetrotransposonsLTRLTR-Cassandra36110611421+
Scaffold9063_LTR-Cassandra_266 RetrotransposonsLTRLTR-Cassandra11964286546+
Scaffold9063_LTR-Cassandra_267 RetrotransposonsLTRLTR-Cassandra26865636830+
Scaffold9781_LTR-Cassandra_268 RetrotransposonsLTRLTR-Cassandra97373469-
Scaffold985_LTR-Cassandra_269 RetrotransposonsLTRLTR-Cassandra30268827183+
Scaffold985_LTR-Cassandra_270 RetrotransposonsLTRLTR-Cassandra11172437353+
Scaffold985_LTR-Cassandra_271 RetrotransposonsLTRLTR-Cassandra31873697686+
Scaffold998_LTR-Cassandra_272 RetrotransposonsLTRLTR-Cassandra2194317243390+

< 10 11 12 13 14 > Total 14


Capsella grandiflora (v1.1)

ID:

Scaffold8888_LTR-Cassandra_261

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

307

Start:

6123  

End:

6429

Strand:

+

>Scaffold8888_LTR-Cassandra_261

TGCGGAGAGGTTTAAATGAATTGAATTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAAGGtcctgagagaactccacaattaagtgtgcttatactggagtagtcaaatgatgggtgaccttccaggaagtggttgtcggaactgtgtgagtgaggccaacacataGGGAAAGATCATGTGGTGATTTATAGGGTCGGTAAACAAGTATTTAAGCCTCCAGGACGTAGCAAACCGACCATCGGATATTGATGGGCTCATGACCCTAGTGAGAGGACGTGAGACCCATTAGGAGAAG

Capsella grandiflora (v1.1)

ID:

Scaffold8994_LTR-Cassandra_262

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

266

Start:

2691  

End:

2956

Strand:

-

>Scaffold8994_LTR-Cassandra_262

CCACCAATATTTGACAACCGGTTTATTACGTTCAATAATCTCTAAGGACTTGTTTATCGACCTGCATATCATCACATGATATTTCTATGTGTTTCTTCCCCACTCATCCATCCTGAAACTTTTCCAGCTAAAACACGCTTAACTGTAGAGTTCTCTCATGATGTTTAAACGAAAATATAAGTGCACTTTGATAGTATATGTGGCCAAATCATTTTTTTAAAACCTCACCGCATGCACCACCAATTTTCTGAAATCAGGTTGTCATA

Capsella grandiflora (v1.1)

ID:

Scaffold8994_LTR-Cassandra_263

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

113

Start:

2957  

End:

3069

Strand:

-

>Scaffold8994_LTR-Cassandra_263

ATTCATCCCCACTAACATATCACAATGTCCTCGTTGCACACCAAAACCATCACCCCCTAATGGTGTGAGCCTTCTTGACTCCACACTCGTTTGGATTTAGCTCTGATACCACT

Capsella grandiflora (v1.1)

ID:

Scaffold9063_LTR-Cassandra_264

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

272

Start:

676  

End:

947

Strand:

-

>Scaffold9063_LTR-Cassandra_264

ATGAGCCCATTCATATCTGACGGCCGGTTAGCTACGTCCAGGATGCTTAAAGACATGTTTACAGACCATACAAACCACCACATGATCTTTTTTGTGTTTTGGCCTCACTCACACAATTCCGCCAACCACTTACCGAAAGGTCACCCATCCTTTGATTACTCCAGCATAAGCACACTTAACAATGGAGTTCTCTCAGAACCTTTGACCGAAAAGATAAGTGCACTTTGGTGAGATAGGTGGCCAAATCAGTTCATTTAAACCTCTCCGCAAGC

Capsella grandiflora (v1.1)

ID:

Scaffold9063_LTR-Cassandra_265

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

361

Start:

1061  

End:

1421

Strand:

+

>Scaffold9063_LTR-Cassandra_265

TGTAACTACGTGATTTCATGCAATATGATAGGAGATGCGAAGAGGTTTAAAGGAGTTGATTTAGCCAACTATATCACCCAAGTGAATTTTAATTGTTTATATAGTCAATGTCATAAGAGAGCTCTATATTTTAGCGTACTTATGTTACTGATGCTTGACCTGCCGAGAAAGTGTTTTTCTAAACCATACAAATGAGAAAAAAAAAAACACGAAGAAAAAATCACGTAGTGCATGAGTTATAGTATCGGTAAACAGTTTTTTAAAGCTTCCAAAACATAGTGTACCGATAGTCACAGTCGGATAGTTTCACGGACGAAAGAAGATGTCGGAACCACTGACAAGAGTGACGGTAGGGAGCGTT

Capsella grandiflora (v1.1)

ID:

Scaffold9063_LTR-Cassandra_266

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

119

Start:

6428  

End:

6546

Strand:

+

>Scaffold9063_LTR-Cassandra_266

TATCAGAGCCGAACCTTGACGAGTGTGGAGTAGTGGGTTCACACCATCACCTTACACCGTCAGGGAGTGACAGTCTTGGTGCGCAACAAAGATGTTGCGATTTGTTAGTGCGTGAGAAT

Capsella grandiflora (v1.1)

ID:

Scaffold9063_LTR-Cassandra_267

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

268

Start:

6563  

End:

6830

Strand:

+

>Scaffold9063_LTR-Cassandra_267

TGCAAAGAGGTTTAAATGAATTAATTTGGCCTCTTATGTTACTAAAAGTGCATTTATTATTTTGGTCAAAGAACTTAAGAGAACTCCACAGTTCATGGTGCTTATGCTAGAGTAGTTCAAGGATGGGTGATTTTTCGGGAAGTGAATGTCGGAACTGTGTGAGTGAGGCCAAAACACAAGAAAATATTGTGTGGTGATTCTTAGGGTAGGTAATCAAGTTTTGAAGTTTCCCGGACGACAAACTGACTGTCGGATATTAGTGGGCCCA

Capsella grandiflora (v1.1)

ID:

Scaffold9781_LTR-Cassandra_268

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

373  

End:

469

Strand:

-

>Scaffold9781_LTR-Cassandra_268

AACCACACTTACACAGTTTCTCTCAAGACTTTTGACCAAAAAGATAAGTGCAATTTAGTGACATAAATGGCCAAATCAATTCTTTAAATCTCTCTGC

Capsella grandiflora (v1.1)

ID:

Scaffold985_LTR-Cassandra_269

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

302

Start:

6882  

End:

7183

Strand:

+

>Scaffold985_LTR-Cassandra_269

TGTGGAGAAGTTTAAATGCATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATATTTTCTGTCAAGGGTCCTGAGAGAACTCCAGAGTTAAGCGTGCTTATGCTGGAGTAGTCAAAGGATGGGTGCCCTTCCGGGAAGTGGTAGTCGGACCTGTGTGAGTGAGGCCAAAACatagggaaagatcatgtggtgatttatagggtaggtaaacaagtatatAAGTCTCCCGAACGTAGCAAACCGACCGTTCGATATTAATGGGCCTAATGAGAGGACGTGAGGCCCATTAAGAGATGTGG

Capsella grandiflora (v1.1)

ID:

Scaffold985_LTR-Cassandra_270

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

7243  

End:

7353

Strand:

+

>Scaffold985_LTR-Cassandra_270

AGTGGTATCAGAGCTGAAACCAGACAAGTGTGGAGTGGTGGGCTCACACTGTCAGGGGATGACGATCGTTGTGCGCAACGAGAACGTTGCGGTCTGTTAGTGGGGGAGAAT

Capsella grandiflora (v1.1)

ID:

Scaffold985_LTR-Cassandra_271

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

7369  

End:

7686

Strand:

+

>Scaffold985_LTR-Cassandra_271

TGCTGAGAGGTATAAATGAATTGATTTGGCCACCTATGTCACAAAAGTGCACTTATCTTTTCGATCAAGGGTCCTGagagaactccagattTAAGCGTGCTTATGCTAGAGTAGTCAAAGGATGGGTGACATTCCGGGAAGTGGTTGTCGGAACTGTGTGAGGCCAAAACAAAGAGAAAGATCATGGGCTCATGGGCCTAATGATTTATAGGGTAGGTAAATAAGTATTTAAGCCTCCCGGACGTAGCAAATCGACCGTTGTATATTAATGGGCTCATGGGCCTAATGAGAGGACGTGAGGCCCATTAAAAGAGGTGG

Capsella grandiflora (v1.1)

ID:

Scaffold998_LTR-Cassandra_272

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

219

Start:

43172  

End:

43390

Strand:

+

>Scaffold998_LTR-Cassandra_272

GCTGAAGTAGTCAAAAGATGAGTGACCTTTCGGGAAGTGGCTGTCAGAACTATGTGAGTGAGACCAAAACACAGGAAAATATCATGTGTTGATTTGTAAGGTCGGTAAACAAGACATTAAGCCTCACAGACGTAGCAAACTGACCGTCGGATATGTATAAGCTCACAGGCCTAATGAGAAAACATGAGGCCTACTGGAGAGGTGACGATCGGGGTGTTA