ID Class Order Superfamily Length Start End Strand View
Scaffold120_LINE-L1_81 RetrotransposonsLINELINE-L1300619224927-
Scaffold120_LINE-L1_82 RetrotransposonsLINELINE-L134153245664-
Scaffold12046_LINE-L1_83 RetrotransposonsLINELINE-L11121114211253-
Scaffold12061_LINE-L1_84 RetrotransposonsLINELINE-L19075077596-
Scaffold12061_LINE-L1_85 RetrotransposonsLINELINE-L112676007725+
Scaffold12091_LINE-L1_86 RetrotransposonsLINELINE-L118114941674+
Scaffold12107_LINE-L1_87 RetrotransposonsLINELINE-L1168395562+
Scaffold12113_LINE-L1_88 RetrotransposonsLINELINE-L13163256632881+
Scaffold12117_LINE-L1_89 RetrotransposonsLINELINE-L11281218312310-
Scaffold12117_LINE-L1_90 RetrotransposonsLINELINE-L11722406224233-
Scaffold12134_LINE-L1_91 RetrotransposonsLINELINE-L1102038294848+
Scaffold12134_LINE-L1_92 RetrotransposonsLINELINE-L1290653178222+
Scaffold12134_LINE-L1_93 RetrotransposonsLINELINE-L144684528897+
Scaffold12134_LINE-L1_94 RetrotransposonsLINELINE-L147890379514+
Scaffold12145_LINE-L1_95 RetrotransposonsLINELINE-L1160465318134+
Scaffold12168_LINE-L1_96 RetrotransposonsLINELINE-L14881488-
Scaffold12168_LINE-L1_97 RetrotransposonsLINELINE-L120876422728-
Scaffold12168_LINE-L1_98 RetrotransposonsLINELINE-L1129734034699-
Scaffold12168_LINE-L1_99 RetrotransposonsLINELINE-L122747995025-
Scaffold12168_LINE-L1_100 RetrotransposonsLINELINE-L1106950586126-

< 5 6 7 8 9 > Total 62


Capsella grandiflora (v1.1)

ID:

Scaffold120_LINE-L1_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

3006

Start:

1922  

End:

4927

Strand:

-

>Scaffold120_LINE-L1_81

TTACGCCAAGTACAAGCTTCTTCTTTGGCGACCTGCAGGACTTCCATAGGATCTTTGTCCACATTATCAAAAACCTTGTCATTTCTGGCCTTCCAGATATACCACAGTAACCAGGGACATAATCTATAGTCATCCTTCACCAGTATATGTAAGATATAATCCATATTTGCAAATACTAAGGATGTAGGAAACCCTATAGACCCCACTGGGACATTCCCTAAAGCCCAAGTTTGTCGAGATGGTGAGCAGCCTAATATTACATGATTTACCGTCACCATGGGGTCTCCACATCGTCCACACCGCGTATCACAATTGATCTCGCGTTGACTCAAATTGGCCAAAACAGAAATACAACATGTAAGTAACTGCCACATAAAGTGATGAATCTTGGGTGGACACTTTAGTTTCCATATACCTGCTAGAAGCGGGATAATATCTGGACCGCACACCTGCGGAGGTGACATTTGCATATAAGGCATCCTGGCTACAAAATAACCAGATTTAACCGTATATGTACCATTCTTTGTGAAATGCCATCCATAGTAATCTGGGATAGGGCAGTTACCAACCAGAAGAGCATTTATCAAAGAGACATCCTCCGCAGAAAAATGGTCGTGTAACACATCAAGATTCCAAGAATTTGTTTGACGATCAATTAACTGTCGAAAATGAAGTGAAGGATCCATAATCAATCCATTACTCATAGCTGGTCTCGGGAATCGAGCTAGAATTCAAGGGTCCGTCCAAACGGATAGAGAGTCCCATGTTCCTACTCTTTTGATGAGTCCTTTCATAACAAGAGATCTAGCTGATATCATACTTCTCCATCCATACGAAGGAGAATATGATTTAACCTTTTCTAATGGGGAAGCATTTCTATAATATCTTCCCTTAAAAACCTTTGCGAATAGGGAATCCGGACAGTCAACCAGTCTCCAAAGTTGTTTCGCCAGAAGGGCTTTATTGAAATCATTTACATCACGAAATCCTAAGCCACTGTCACTCTTACTAGAGCACAGTTTATCCCAAGCGCGCGAATGCATTCCTCCTGATTGACCATTTGTGCTCCAACAAAACTTTGCCACCGCACAAGTCAGTTTGGCTGTTATCGACTTTGGGAGCCGAAAACAAGAGATCACATAGGTTGGTAAACCTGCTGCTACCGACTTAATCATAACCTCCTTACCTCCTTTGGACAAGAATTTGGCTGACCACCCATTTATATGAGCCTGTAGCCTATCCCGTACAAAGGAAAACTCCGCCAAAACTTTCTGGTAAACCAAGATATAAACCCATGGCCCCTATCTTGACAATTCCAAGAGTTTTCTGTATCTCAATTTTTCTCAATTCATCCACTTTATGACCATATTGTAACGACGATTTTTCAAAATTTATTTTCTGTCTTGACAATGTTTCATAGACGTTGAGAATCCCCAAAACAACCATGCATTCCTCTTTAGTTGCTTTGCAAAAAAAAATAGGCTATCATCCGCAAATAACAAGTGAGAAATTGGCGGACACTTATTTGCAACTTTAATCCCCGTTAGAAGTTTATCTTGCTCCGCCTTCCGGATATTAGCAATTAGTACCTCCGTGCAAAGAATGAAAAGGTATGGTGATAGCGGATCACCTTGTCTCAACCCTCTCCCCAGATGAATGAAACCTTGCGGCTGACCATTGATAAGGACGCGATATTCTACCGAGGTGACACAAAACATAATCCACGCAATCCATTTCTTAGAAAATCTGAACTATCTGAGTAGGCGTTCAATAAAAATCCACTCCACCCTGTCGTATGCCTTGCTCATATCCGTTTTAATTGCTACAACCTGCTCTTGCATGATGGATTTGTCCGAACCACATGAAACATCTCCTGAGCTATTAATATGTTATCTGAAATCAGTCGACCTGGAACTAAGGCGGATTGGGTCTCCAAAATAAGGGTTGGGAGTACCGTTTTCAACCTTTGACACAACACCTTCAAAATTATTTTATAACCGACATTGCACAAGCTAATCGGACGCAATTCTGCCATCTTAGTTGGTCTGTCCACTTTAGGAATAAGACATATATTTGTCTGATTTAACCGTTTGTCAAAAACCCCTGACGTCAGGAACAAATTAACCAAACCAGGTCCTCCTTTATCACACTCCATGCTTTCTGAAAGAACAAAGCTGTCATCCCATCTGGCCCTGGTGCCTTATCAGGAAACATCATGAACACCACATTATGAATTTCATTCTCTGTAGCTGGGGCCGTTAAAAAATTATTAATATCATTCGTGATACATGCCGCCACCTCATGAAGATAATCCTCAAAATCTTGGGGATTAGTCGAAATAAAAAGATCTTCAAAATAAGATATAGCCACACCACTTATATCCTTATCCTCAGTAACACATTTATCATACTTATCGAATAAACCTACAATCCGCTTTCTAGCCCGTCGATTTTTtgtttgcgcgtGGAAAAATTTAGTATTTTTATCGCCCACCCGCATCCACCGATTTCGGCTCTTTTGATACCAGTATACCTCCTCCTCCTCCTCCTCATATGACTCACGCAACCTACTCGACAAAACATAATATCCGATGGTAAACTCGTATCACCTGCCTGTGCAGCCGCCAATTTACCTTTTAATTCTTCAATCACATCCCTACCAAAATCTTTCTGGTTACTCCTCCAGTGAGAAATTGAACGACGAAAGTTTATCACTTTGTCCATAAAATTTCTGGATCCCCTACCCGGAACATCAGTCCAACCTTCATCTATTGCCTCCATAAGTCCCTCTTTACCTATCCAACATTTATCAAACATAAAACTCCGCTTCCTTCTAACCTGCTTTTCCGCTATGAATGCTACTATTGGTTTATGATCCGACCCAATCATGGGCAAGTATTCCACAATAGTATCAGAAAACATTTCATGCCAATCTTCCTTACCAAGTGTCCTATCTAACCGACACCGAATATGTATTTTGTCCCGCCAACCCCGCCATGATAACCAG

Capsella grandiflora (v1.1)

ID:

Scaffold120_LINE-L1_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

341

Start:

5324  

End:

5664

Strand:

-

>Scaffold120_LINE-L1_82

TAAGTGAATTGTCTTTCCCTTAAAAACCAACTCCACATCAATGAGACGATTAGATTGAAATAAAATGACAACTTTATTAAAATTATTATTATAAAAAATAGCTAAACGCCCACTACAACCTAGAGGATCAACCGCAACTAAATTATTATAACCAAAATGACTTTGAAATTTTTCAATAAAATGTGACAATTGTTTTGTTTCCGAAAGAAAAAGAAAATCCGGTTTATGACGCTTCCACAAATCCCGGAGATAACCAATAGTTGGCATATTCCCTAATCCTTGGCAATTCAAACTCAAAACCTTCATTTAAAATTATTTGGCTTTGGTGGTTTTGGTCCACC

Capsella grandiflora (v1.1)

ID:

Scaffold12046_LINE-L1_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

112

Start:

11142  

End:

11253

Strand:

-

>Scaffold12046_LINE-L1_83

CGGTCGAGAAACTGAATGTGTTGATCCGGAGAGCTTGGAAGATCTCCATGCCTGTGTCGATTGATCCATTATATTCAAGCCAAAGAGTGTGGACAGTTGCTTGAAAGACAAG

Capsella grandiflora (v1.1)

ID:

Scaffold12061_LINE-L1_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

90

Start:

7507  

End:

7596

Strand:

-

>Scaffold12061_LINE-L1_84

GCATTTTGTGATATTAAAGATAAAGAAAATGATGAGAATTATTCCCTATCTTGCTTGATATCCTTTAGATACACAAAGCAGATTATTTGG

Capsella grandiflora (v1.1)

ID:

Scaffold12061_LINE-L1_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

126

Start:

7600  

End:

7725

Strand:

+

>Scaffold12061_LINE-L1_85

ATGTAAAAGCAGATTATTTGGCACGCAAAGCTCGTGCTTGTCCGTATGCTATGAAGTTTGTAAACAGTTTCCCAACTGGTTGGCTCGTTTGAGTTAATTTAAGCTTATTTGGTGACAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold12091_LINE-L1_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

181

Start:

1494  

End:

1674

Strand:

+

>Scaffold12091_LINE-L1_86

TGGTTATCCACCTTCATGCATAGTTTGAGTATCTCATTTTGGCAATAAGATACCTAGGTTATTTCACTTTTTTCTATGTGATGTTGTGTTTTAGACCATTTGATGGATTATAAAGAAGTTAAATTCAGCTTTTAGACACTTCCGTGATAAGTGTGTCATGCATGCTTTTGCATCGGAGTTA

Capsella grandiflora (v1.1)

ID:

Scaffold12107_LINE-L1_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

168

Start:

395  

End:

562

Strand:

+

>Scaffold12107_LINE-L1_87

ACCAAAAGCGTTTCAAAAGACTTATGAGCCTGTGGCTGCGCTGATCGTTCCTTCTGTCGTATGGGCCTAATTGTTTTCTTGCTTTTCCCTTTTTTTTTGCCAAGAACTCAATGTAATTGGTTGTCAAACCACCTTTTCATTTATATGATATTTGCAATTTAGCAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold12113_LINE-L1_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

316

Start:

32566  

End:

32881

Strand:

+

>Scaffold12113_LINE-L1_88

AAGATTGTGGCTCATGCTATAGTACTCTATGCTATTTGGAAGCAGAGAAACAATCTTCTTCACAATGGCCAAGTTATCCCCTCGTCGATCATCTTTAAGACCATTGACAGGGAGATCATCAATTCTATAAATACCAGGCGTCACTGAAAAAAGTTTAGAAATCTAATGCGTCTTTGGATAGTCTAATAGGCTTTTTCTAAGATCTGGTTTGCTTCCTTGTTTTTAATTTTTTTGCCAAGGAACCTGCTTATTTGGTTTTCCTTTTGTAAACCCAACCATCTTTCATTTTATATGATATTTACTTGCTTAGCAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold12117_LINE-L1_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

128

Start:

12183  

End:

12310

Strand:

-

>Scaffold12117_LINE-L1_89

TCTTTTTTATTTTGTTATCAATATGAAGAAATTAACTCAAATGAGCCAATTCGGAGGACAGTACGTTGTTTACAAACTTGACAAGATGCGGCATGGTACGGACATTTCGCGCCAAAAGATCCGCCTTT

Capsella grandiflora (v1.1)

ID:

Scaffold12117_LINE-L1_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

172

Start:

24062  

End:

24233

Strand:

-

>Scaffold12117_LINE-L1_90

TTTTTTTTTTGTTATCAAAGGGCCTACTATCACCTCAAATGAGCCATTGCGAAGGACAACTGTTCACATATTTGACTAGATACAGAGTGGAACGAACTTGTCGAGCCAAATAATCCGCTTTTACATTTAAATTTCTAGGAATAAAAGAGAGAGAAAAAAGTTGAGAATTCTT

Capsella grandiflora (v1.1)

ID:

Scaffold12134_LINE-L1_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1020

Start:

3829  

End:

4848

Strand:

+

>Scaffold12134_LINE-L1_91

GTTTCTCTCTCGCGAAAAGGGTGATTTTTTGAGCGATTCTTCCCCTTTTCCGATTTGGTGTAATTATTCTCCACTTTGGAGTGTTTTTCCGACAGATCATAACAGTTTTGTTCAGTTTTGGTTTGACGGTTTCGATCTGAATCAGTTTTCTGAATTCAGTTTGCTTTTTCCTTGGTTTTTGATTGGTAACCGTCAGAAACCGCCATGGGCGAACTTATATATATATGTCGGAATTTCTACTTTCTTCTTTACTTTCTTTCCTACATTCTATCTCTGTTTCGTATATCCACATCAATCTGTGTCATGAGTGATTACGTTCGTAAATCGCTGCAAAATCTCGACTTAGGGATCAACGATGAACCGGTGTCTCTTCCACCGGATCTTTGTGGCAGGGCCGCAACTGCTAACCGGTTCTCTTTGATTGTTTCGGTGGTAAACTCAAATAAACAAAACCTTCGTGCTATTGTAAGCCAAATGCCAAAGATTTGGGGTTTTGTTAATGATTGTCGTGGCCGTATTTTGGGAGATGGAAAAGTCTTGTTCATCTTCAAATTGGAGGAGAAAATGAATTTGGTTCTTCGTCGTGGGCCTTGGGCATTCAATGAATGGATGCTATCTGTGCATCGCTGGTATCTGAATATCAGTAAAGAGGAGATGAAGATAATACCTTTTTGGATTCAAATCAAAGGCATTCCAATCATGTATCTTACTACTGCGATGGTTAATTTCGTCGGTGAAAAATTGGGTCATGTGGTTAATGTTGACTTTGATGAGAATGTTAATTGGGTGAAGTTCGTTCGTGTATGCGTCAATTGGAGTATCGACACATCGCTTCTCTTTCAGAGGAACTTCCAATTTTATGTTGATAAGAACACGAATTTAAAATTTCGTTTTGAGAGGCTCCGTAACTTCCGCTCTCGCTGTGGTTCACTAAAACACGATATAAAAGAATGCGAGTTAGCTTTTGAGGATCCCCTGTTGAAGATGAAGACAATGGTGAACCAGATGACAACCAAAATG

Capsella grandiflora (v1.1)

ID:

Scaffold12134_LINE-L1_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2906

Start:

5317  

End:

8222

Strand:

+

>Scaffold12134_LINE-L1_92

TGGCGGTCCTGAGCCACATCCACAAGAAGGAGAACACTGAGTCGATGGGGTCAAGCAGCAGCCCAGCTGTGAACGTAGGCGCGGGAGGCCCGGTACTTCCATTGTTCCCCCCATGAGAGTCTATTCATGGAATTGCCAAGGAGTTTGCACTCATCTGACTTAAATGAGATGCACTCATCGTATTATTAAACCTAATGTTTTATTTCTGTGTGAAGCACTTAATAAGTGTGATGTTGTGTGTGATTTTGCTTGTGTTTTAGGATTTTTAAATGTCATAACTGAATCACCTATTGGCAGAAGTGGTGGTTTGGCAATGATGTGGACAAATAATGTAAGTTTATCCAGAGTTTCtcaggatgaacGTATGATTGATGTTCATATCAACTATAATAATATAAGTTTTTATTTGTCTCGTGTGTATGGTAATCCTGTCCAAAGTGATAGACATTATTTTTGGGAACAATTACAAACTCTAGGTAGTACAAGGGCTGGTCCTTGGATGCTTGTAGGTGATTTCAATGAGATTTTGAATAATAATGAAAAGATGGGACGTCCTCGTCGTGAAGAATGGACATTTAGAGATTTTAGGGCCATGGTTACTTCTTGTAAACTTCAAGTTGATAAGTTCAAAGGCAATCGGTTTTCTTGGGTAGGAGATAGATGTCAACATACTGTCAAATGTTGCCTTGATAGAGTCATGGTTAACAAAGAATGGGCAGCTACTTTTCCTAATGCTTTAACAGAGTTCATGGACTTTAATGGCTCTGTTCATAAGCCAACATATACTACATTCACGACAAGCTACATAAATCACCAAAAACCATTTCGATTTGATAAGCGTTTAATTACAATCCCTGACTTTGACTTTATTGTGAAAACAGGCTGGAATTTATGTAAAGCTAATCCATTCTATTCTATTGGTGATCCAATCTCTGATTGTCGTGTTGCTATGGCAAAATGAAAACATCTATCCAACATCAATGCTGCCAAACTTATTGTTTATTTTCAAGACGTTCTTAATAAGGCCATGGAAAGCATGAACCGTAGTCATCGCCAAAAAATACCGAAGTTGCAACGAGAGCTCCAGCAAGCTTATAACGACGAAGAGTACTATTGGAAAAAGAAAGGTAGGAATATGTGGATGCATCTTGGCGATCGTAACACGGCTTTCTTTCATGCGAGTACAAAAACACGTTATTTTAACAACTATATTTCTATTATTCGTGATGATCTTCACAATACATATCAAGGCGATATAGAGGTTCGAAACCATGCCCCAGAGCATTTTGTAATATACCTCAAGCCACACTCCGGTTGCGCCTATAGATTTTGGAGACTTTCCCTCCAATGTTACTCCGACTATGAATGACGACCTAACCAGAGAGTTTAGAAATGCTGAAATTTTTGAAGCAGTTTCTTCTATTGGCGATGATAAAGCACCTGGACCGGACGGATTGACTGCTTGTTTTTACAAACATTATTAAGATATCACTGGCGATGATGTAATTCTGGAAGTTAAGGATTTTTTTGCAACCTCTTTTATGAAACCAGGTATCAACCACACCAATATATGCATGATAGCTAAACATGATAAACCCTCCACTCTATCAGATTATAGACTTATTGCTCTATGTAATGTTCTTTACAAAATCATATCTAAATGCCTAGTAAATCGGTCAAAAAATCATTTAGATGGCATTGTTTCTGATACCCAGGCTGCTTTCATTCCGGGTAGGAATATAAATGATAATGTTATGATTGCTCATGAAGTAATGCATTCTTCAAAAGTAAGAAAAAGAGTTTCCCATAATtatatggccataaaaactaatgttactaaggcatatGATAGAGTGGAATGGGATTTTTTGGAGGTTGCAATGAAATTGTTTGGTTTTTCTGAAACTTGGATCAATTGGATATTGGCTACTGTTAGAACTGTCCGTTACTCAATATTAATCAATGGATCACCTCAAGGTTTAGTAGTTCCAGAAAGAGGaatacaccaagGAGATCCTTTATCTCCTTATCTTTTTATCCTTTGTGCTGATATGATGAGTCACCTAATTAGAACTTGATTAAAAGATGGAGATATTCGAGGAGTGCGTATAGGAAATGGTGTTCCAGCAATAACTCACCTCCAATATGCTGATGACTCTCTTTTCTTTTGTCAAGCAAATGTTAGGAATTTTCAAGCAATAAAAGAGGCTTTTCAAGTCTATGAATATTATTCAGGCCTCAAAATCAATATGAACAAGCCTTTAATAACATTTGGCTCAAGAGTAGATGGACGTACTCAGAATAGATTAAAAGGCATCCTAAAAATACCTAACCATGGAGGTGGGGGAAAATATTTAGGTCTACCAGAACAATTTGGAAAGAAAAAGAAAGAAATGTTTAGTTACATCATTGACCGAGTGAAACAAAGGACTTCGTCATGGAGCGCAAAATATTTGTCTCCAGCTGGCAAGGAAATAATGCTCAAGTCTGTCGCTATGTCAATGTCAGTTTACTCAATGTCTTAATTCAAGCTCCCCCTTGGTATTATATCAGAAATAGAATCGGTTCTTCAGAAGTTTTGGTGGGAAAAAGGAAATCAAAGTAGCGGAATATCTTGGATAGCTTGGAAACGTCTCCAACATTCTAAAAAGGACGGAGGTTTAGGATTCAAGAATTTGGAGAAATTTAATGACGCCTTATTTGCGAAACAAGCATGGCGAATCATTAAACAACATGAATCTTTATTTGCTAGAGTTATGAAAGCTATGTACTTCAGAGACAGTTCAATCCTAGAGGCGAAATGTAAAGCAAAACAATCGTATGGTTGGGCATCTATCCTTGCAGGTTTGGAAATTATATAGAAAGGATCACGTTTTACGATAGGAGATGGTGAGCATATTCGGATT

Capsella grandiflora (v1.1)

ID:

Scaffold12134_LINE-L1_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

446

Start:

8452  

End:

8897

Strand:

+

>Scaffold12134_LINE-L1_93

GTTCTGGCTATTGGTTTACCATGATTGATCCCATTTTTGTAGCTACCCGTCCACCTTTACCACATGGTTCTACTGGTTTAAAAAATAAAATTTGGAATCTGAATGTTCTTCCAAAACTTAAACATTTCCTTTGGCGTATTGTCACACGATCTTTAGCCACAATTTCAAGATTAAATGCTCGAGGCATGAATATTGATCCGGTTTGTCCTCGTTGTTTTCGGGCTGATGAAACAATAAACCATATTTTTCACATGCCTTATGCTAAACAAATGTGGGAACTCTCACATATTCCCCTTCAGAACCTTTATTCCCCTTCCATTGACAGCGAACAAAATTTACAGCATATCATAGATTTTCAGTCAACTTCTTATTCACTTCACGACAAACTTTTGCCTTTATGGCTTCTTTGGCATATTTGGAAATCTAGGAATAAGTATATTTTTGAA

Capsella grandiflora (v1.1)

ID:

Scaffold12134_LINE-L1_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

478

Start:

9037  

End:

9514

Strand:

+

>Scaffold12134_LINE-L1_94

AAATGTAATTTCGATGCGGCTTTCAATAACAATAGTAATAGATCATCGGGAGGTTCGATTGTTCGTAATTCGGAGGGAGCTGCTTTAGGATGGGGTGCTTCTCAATTTGGAACGTCTATCTCGGCCTTGGAATCTGAAGCAAAGGCTTTATTAGCAGCGTTACAACAGGTTTGGATAAGGGGAGTATTTGCTTTGAATGAGAGTGTGAGTTATTGATTAAAATTCTACGTAATGAACACTATGATATTTCAATTAAAGCTGTTCATCGGGACATTCTTATGTGGGCTGCTAAGTTCTCCAATATTTCTTTTGATATTTGTAATAGACATTGTAACAAAGTGGCTCATTTGCTTGCTTCATTTGGGTGTAATATGGTTTCATTTTATTCTGATTTCTTGAATCCGCCAACATGGCTCTTAGAACAGTTGTATTAtgactttaacaattatcaaatataattatattttgacggaaaaaa

Capsella grandiflora (v1.1)

ID:

Scaffold12145_LINE-L1_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1604

Start:

6531  

End:

8134

Strand:

+

>Scaffold12145_LINE-L1_95

TTACCGGCGGCGACAAATGATGCCTTGATTGTTTTGTTAGCCAAGGTGGAGAGCCCGGATAGGATCACACAGTTTCGCCCCGTAAGCTTGTGTAATGTTCTGTTCAAGGTGATAACTAAGATGATGGTTATAAGACTGAAAAATGTGATATCCAAGCTTATAGGACCGGCCCAAGCAAGCTTTATCCCCGGCCGTTTGAGCATTGATAATATCGTCATTGTACAAGAAGCCGTGCACTCTATGCGGAGAAAAAAGGGAGGAAAGGTTGGATGTTGTTGAAACTGGACCTTGAAAAAGCTTATGATCGGGTCCGTTGGGATTTCTTAGAGGAGGCCTTGGGAGTTGCGGGATTGGATGAAGAGTGGAGAAGAAGGATAATGAGGTGTGTTTCTAATCCTTCAATGTGCCTATTGTGGAATGGGGAGAAGACAGAATCGTTTGTCCCAGAAAGGGGTTTGAGACAAGGAGATCCTCTTTCACTGTATTTATTTGTCTTGTGTCTCGAGAGACTATGTCACCTTATTGAGGAAGCGGTTGGCCAAAAAGAATGGAAATCTATCACAATCTCACGCGGTGGACCGAAGTTATCACATGTATGTTTTGCGGATGACATTATATTGTTCGCAGAGGCATCAGTTGAGCAAGTTAGGGTGATCCGGAATATTTTGGATAGATTTTGTATGGCCTCGGGGCAGAAGGTGAGCCTTGAGAAGTCAAAGATCTTTTTCTCGGCGAATGTGAGTCGTGACATGGAGAGGATGATAACGGGTGAGAGTGGAATTGGATCTACACGAGACCTAGGCAAGTATTTGAGCATGCCGATTTTACAAAAACGAATAAATAAAGAGAGAAGTCCTACAACGGGTGTCGTCTTGTCTTGCGGGGTGGCGGAGTCAAACTTTGAGCATGGCGGGTCGTGTGACGTTGACAAAGGCGGTTCTATCCTCCATACCGGTGCATACGATGAGCACAATTTTACTTCCATCATCTATATTGAAGAGTTTAGATAAACTTTCTCGATCGTTTGTGTGGGGAAGCACACCGGAGAAACAGAAAATGCATTTGATAGCTTGGGACCGTGTGACTAAGCCGAAGGGTGATGGAGGTTTAGGGATACGTGATTCTACTGAGATGAATAAGGCGCTGTTAGCAAAGGATGGATGGAGGTTATTGGCTGAGGATGGGAGTTTGTGGGCTCGGGTGCTTAGCCAAAAGTACAAAGTGGGGGACATTCATGATGCGGCATGGTTGCGTCCGAAGAGTTCTTGGTTGTCCACTTGGCAGAGTATTGGCGTGGGTTTAAGGGAGGTGGTGTTGAAAGGGATAGGCTAGGTACCGGGAGATGGATCGCGGATTTGTTTTTGGACGGACAAGTGGTTGCTTAGGAGGCCGTTGTTGGAATGGGTCCCGGGTCAGCTTTTGTTTGATGTTCAACGGCAGACTGCGGAGGAGTATTGGATTGATGGGGTCGGCTGGGATATGACGAGAATAGCGGGATTCTTACCAGAGAATATACGTCAGTTGTTGTATGCGGTGGTGGTAGTCCCGGAAATGGCTGATCACATGTCTTGGAAAGGAACAGAGAATGGGAGTTTTACGGTGAA

Capsella grandiflora (v1.1)

ID:

Scaffold12168_LINE-L1_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

488

Start:

1  

End:

488

Strand:

-

>Scaffold12168_LINE-L1_96

TTTTTTTTTTCGTCAAAATATGATTATATTTGATAATTGTAAAAATCGTAATACAATTGGTCTGATAGCCATATAGgcgggtttaagAAATCAGAATAAAAGGGAATCGAATTACAACCAAACGAAGCTAATAAATGAGCAACTTTATTACAATTTCTACTACAAAAGGCAAATgaaactttagaAAACTTGTCCACCCAAAAAAGAATATCACGAAGAACAGCTTCAATTGTAATATCACAATGTTTGTTTTGTAGCatgtcaattaaTAGCTTGCAGTCACCTTCAAAACAGATATTCGTGATACCCCTTAACCAAGCTTGTTGTAAAGCAGCCAAAAGTGCCTTTGCTTCGGCTTCTAACGGCGAAGTAGACGTTCCTAATTGAGAAGCTCCCCAACCTAAAGATACTCCATCCGAATTGCGAATAATCCATCCCCCCATTGTTCTCTTTGTGATATTATCAAAAGCCGCATCAAAATTACATTT

Capsella grandiflora (v1.1)

ID:

Scaffold12168_LINE-L1_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2087

Start:

642  

End:

2728

Strand:

-

>Scaffold12168_LINE-L1_97

TTCAAAAATAAATTTATTTCTTGACTTCCAAATATGCCAAAGAAGCCATAGAGGCAACATTCTTTCTTGCTGTGAAAAAGAGGTGAACTGATAATCAATAATATTTtttaaattttgTTCACTATCAATGGAAGGAGTGTAGAGATTTGGAAGGTGAATATGAGATTGTTCCCAAATTCGTTTAACGTAAGGGCAAGTGAAAAAAatgtgatttattgtttcatcagcccgaaaacatcacGGACACACTGGATCTATATTCATACCCCTAGAATTTAATCTTGTAATTGTGGCTAAAGATCTAGTGATGAAACGCCACAAGAAATGTTTAATTTTGGGAAGAATGTCAAGTTTCCAAATTTTGTTCTTTAAACAAGTGGAACCGTGAGGTAACGGCGGTCGATTAAGCATGATATTGGGATCGTTCATGGATAGCCAATAGccggaacgtacggaatattcccctgttttgttataatgacAAACAAAACCATCCGGTGTTTGTTGTTGAGATAGGTAAATATCGTGGATAATAGCATGATCCTCAGGTCTAATTAATTCTGTAAGCTTTGTTGTATCccattgtctgtATCCTCTAGTCGTCGTGATCAAGTCACTCATATGAACTTCTGCATCTGGATTGATACTAAAAACTGGTCTGGGAGGGTGAGTTAGTGAGACATTATCTTTATTAATACGAATATGGTCACCATTGCCGATTGTGTAACGAGTTCCCTTTTTAATCACTTCTAAACCTGCAAGTATTGATGCCCATCCGTACGATTGTTTTAATCTATTTTTCGCATCTAAAATTGAACAATCCCGGAAGTACATAGCTTTCATAACACGGGCAAATAAAGATTCAGGTTGTTTAATGATTCTCCATGCTTGCTTCGCAAGTAAGGCGTCATTGAATTTCTCCAAATCTTTGAAACCCAATCCACCATCTTTTTTGGCATATTGAAGTCGTTTCCAAGCTATCCAAGATAtgccgcgattcTGATGACCTTTTTCCCACCAGAATTGCTGAAGAACTGATTCTATTTCCGATATAATACCAAGAGGGAGTTTGAAGCAAGACATCGAATagacatgcattGACAAAGCGACTGACTTCAGCATTATCTCTTTTCCAGCCGGTGATAAATGTTTTGCACTCCAAGTCGAAGTACGATGTTTGACTCTATCAATAATGTACTTAAACATTTCCTTCTTTTTTTTACCAAATTGTTCCGGTAAACCTAAATATTTTCCCCCACCTCCATGATTTGGAATATTTAAAATGTTTTTTAgtctactttgaGTACGTCCATCTACTCTCGAACCAAAAGTTATAAGAGATTTATTCATATTAATTTTTTGTCCTGAGTAGTATTCATAGACTTGaaaaacttcttTTATAGCTTTACAATTTCTAACATTTGCTTGACAAAAGAAAAGAGAGTCATCAGCAAATTGAAGGTGGGTTATTGGTGGAACACCATTGCCTATACGAACTCCTCGAATATCCCCATCATTTACTCGAATTCTAATAAGATGACTCATAATGTCAGCACAAAGAATAAAAAGATATGGAGATAAAGGATCCCCTTGACGAATCCCTCTCTCTGGAATGACTAAACCTTGTGGAGAGCCATTGATTAAAATAGAGTAACGGACAGAACGAACTGTAGCCATTATCCAATTAATCCAAATTTCAGAGAAACCAAACAATTTCATTGCAACCTCCAAAAAATCCCATTCCACTCTATCataagccttagtaacatcagttttgatggccatataattttttgaaactcgttttcttacttttaaagaatgcatcacctcatgtgcaatcataACATTATCATTTATATGACGACCCGGAATGAAAGCAGCTTGGGTGTCTGAAACTATGCCATTTAAATGTTTTTTAACCGGTTTACTAGGCATTTAGATATGATTTTATAAAGAACATTACACAAGGCAATAGGtctgtaatctgataaagtggatgGTTTGTCATGTTTAGGTATCATGCATATATTTGTGTGATTGATACCTGGCTTCATAAAGGAGGTTGCAAAGAAATCTTTAACTTC

Capsella grandiflora (v1.1)

ID:

Scaffold12168_LINE-L1_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1297

Start:

3403  

End:

4699

Strand:

-

>Scaffold12168_LINE-L1_98

CCACTGCTTTGTCTCCTTGATAAATATTGTTGTGTTCATCTCGAATAAATGAAATATAATTGTTGGAGTATCGGGTTTTTGTACTCGCATGGAAgaagccagtgtTACGATCACCCAAATTCATCCAAGTATTCCTACTTTTATTCTTCCAATAGTATTCTTCATCATTATAAGCTAATTGGAGCTCCCTTTGAAGATTTGGAATTTGTTGACGATGGCTCCGATTCATACTTTCCATGGCTTTGTTTAGAGCTTCTTGAAAATAAACAATACGCTTGGCTGAATTAATGTTAGCATTGTGTTTTCCTTTTGCCATAGCCATACGACAATTTGAAATTTGATCACCAATAGAATAGAAACGGTTTGTTTTGCAATAATTCCATCCCTTTCTCACAATAAGATCGAAGTCAGGAATATTGATTAACCTCTTATCAAAACGAAAAGGTTTATGGTGAGTGCTATAGTTTGTCGTGAATGTAGTAGAGGTAGGTTTGTGGTCAGAACCACAAAAGTCCATGAACTCCGTTACAGCATTAGGAAACGTAGCAGTCCACTCTTTGTTGGCCATGGTTCTATCAAGACAGCATCTAACAGTGTGGTTATGCCTCTCTCCTACCCAAGTGAAACGATTACCCTTGAACTGAATATCTTGAAGATTACAACAAGTAACCATGTCCCTAAAATCCCTAAAGGTCCACTCTTCTCTTCTAGGACCTCCTATTTTTTCATTATTATTCATGATTTCATTAAAGTCACCTActaacaaccaaGGACCAACCCTTGTTCTACCTAAAATTTTTAACTGATCCCAAAATAAATGTCTATCTCTTTGAACTGGATTACCATACACACCagacaaataaaAACTTATATTATTAAAGTTGACATGAACATCAATCATACGTTTATCCTGAGAAACCTTGGAtaaacttacatTGTTTGTCCACATCATTGCCAAACCACCACTTCTGCCACTAGGTGGTTCAGTTATTACATTAGAAAATCCTAAAACAGAAGCAAAATCACACACAACATCACACTGATTAAGTGTTTCACACAGAAATAATACATTAGGCTTTACAATACGACATAAACGTTTTAATCTCATTTGAGTCAGCTGAGTGCAGACTCCTTGGCAATTCCATGAGACGACTCTCATGGGGGAAACAGTGAGGGTACCGGGCCCCTCGCGCCTCCGTCCATTGCTGTACCACTGGTTGAACCCATGGATTCAGTCTTCTCCTTCTTTCGAATTTGGCTCAGGACCACCAAATCCTCTGTTTCTTCACACCTCTGG

Capsella grandiflora (v1.1)

ID:

Scaffold12168_LINE-L1_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

227

Start:

4799  

End:

5025

Strand:

-

>Scaffold12168_LINE-L1_99

CCTTTTCCCCTAGCAAACTTGGAGTGAAGAAAGCGGAGACGCTCAGCAGTTAGTTCCGTGTCTTCAAAGAAACTAGGAACAGAAGAATCACTCGACTCAGTGATGATAAATTCTTGGTGTCGCTTTGTCCTGAAGCGTGGTGAACCAACGGAGTCCCGACGGTGAATTGCAAGGCCTGGAATGATATCCACCGGGTCGACAGTTTCCAAAGTGTTCACATCAGACAT

Capsella grandiflora (v1.1)

ID:

Scaffold12168_LINE-L1_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1069

Start:

5058  

End:

6126

Strand:

-

>Scaffold12168_LINE-L1_100

CAGGAATGATATCAGGATTGTACTCTTCGCCTCTCACATCATCATCATTGTTATCCCCATGGTTGTCGTCATTGTCTTCAGCATCATCGTTCTCAACCGGAGGGTCCTCAAACACCAAGTCGCACTCCTTCACATCATGCTTCAGAGACCCACAACGGGAACAGAAGTGCCTCAACCTTTCGAAATGGAATTTCAGCGTCGTGTTCTCCCCTGCAACAAACTGAAAATTTCTCTGAAACCGGAGAGGGTTGTCGATATTCCAATCAATGCAGACCCGGACAAATTCAACCCAGTTAGCGTTTTCATCAAAGTCTGTTGCAGCAACGTGTCCCAAGTTTTCCCCGATGTAGTTCACCATCGCCGACGTAAGATACATAATCGGAATCCCCTTCATCTGAATCCAAAAGGGGATTATCTTCATTTCCTcgtccgtgatatttggataacaacgattaACAGACAGCATCCAATCGTTGAAAGCCCATGGCCCACGGCGGAGAACCAGATTCAAAGGTTCTTCAGACTTGAAGACAAACAGAACTTTCCCATCTCCCAGAATTCGGCCTCGACATGCATCAGCGAATCCCCAAATCTTTGGCATCTGACTCACTATTGCTCTGAGATTCTGTTTCCTCGGATTAACCACAGTGACAATTAGGGAAAAGCGATTTGCAGTGGCGGCTTGCCCACATAACTCCGGTGGAAGCGAGACTGGGTCATCATGAATTCCCAAATCGAGATTTTGAAGTGACTTTCGAACGTAATCACTCATGATCGTGTTTATTTTGGACTGTAAATTTTCAGTGTTTTGAATCGAAAACGAAGTGAAGAAAGAAGAAGAAAGTAGAACAGATATATAGTTTGTCGGCCATGGCGGTTTTAAACGGTTACCCTTCGATAAACAAGGGATCGATAAACTGAAACCAGAAAACTGTCTCAGATCGAAACCGTCAAACCATAACCGAACAAAACTAGAATGGTTTGTCGGAAAAACACTCCAAATTGGAGAAGAAAAAGAACAAATCGGAAAAATGGGGAGAGTCCCCcggaaatcgccTCTCAAGAGAGA