ID Class Order Superfamily Length Start End Strand View
Contig123_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA3302043120760+
Contig123_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA3089591296219+
Contig123_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA332206234206565-
Contig1252_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA3291740017728-
Contig1279_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA15962906448-
Contig128_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA2973725837554+
Contig129_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA2441614216385-
Contig1296_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA1461881418959-
Contig1303_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA851415514239+
Contig131_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA94142547142640-
Contig1311_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA2432621226454+
Contig1316_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA1722227022441-
Contig1318_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA1444969149834+
Contig1320_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA2911373414024+
Contig1326_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA1031458514687-
Contig1350_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA1361879618931+
Contig1356_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA1163210732222-
Contig1357_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA1756608766261-
Contig1362_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA1644142341586+
Contig1364_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA1671635316519-

< 2 3 4 5 6 > Total 14


Barbarea vulgaris (v1.0)

ID:

Contig123_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

330

Start:

20431  

End:

20760

Strand:

+

>Contig123_SINE-tRNA_21

GTGGAAGCCCCCTTGGCCAATCGTTTGGTCAAGGGTTCATTAATGCTTCTACACTAAGAGGTCTGAGGTTCGAGTTTCAGATACTGCGATTTATTAACAAATTTGCAGATTAATGGAAGCAAGTTTACAAGAGGTCTCCAGCGATGTACAATTATAGCCGTTCGCCGTGATTCTAGGTAGAGAGGGAAGTGTCATCAGTGTGTCCATCAAGAGCATGGAGAAGGTAGTGTCGTCTCTCATGGATCTAATAAGGATCGGAAAGAATTGTCCGTGGTAGAATCGTCTATGTAACAGTTCTCATAATTTGCAATAAAATAATAAATTTAGATG

Barbarea vulgaris (v1.0)

ID:

Contig123_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

308

Start:

95912  

End:

96219

Strand:

+

>Contig123_SINE-tRNA_22

TGGAAGCTCCATCATCCTATTGGTTGACTAAGAGTTAATTAATGTTTCTACACTAAGAGGTCTGGATTCGAATCTCAGATATTGTGATTTTTTTGCAGATAATAGAAGCAAGTTTACAGAAAATCTCCATCGAGCACAATTAGAGTGTTCGCCGTGATTCTACACAAAGGGAGAAAATGTCTATCAAGAGCATGGATAAAAAAATATCGTCTGTCGTAGATCTAATAAGGGTCAAAAAGAATTATCCATGGTATAATCGTCTATGTAACAGTTCTCATAATTTACAATAAATAATAAATCTAGATGAC

Barbarea vulgaris (v1.0)

ID:

Contig123_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

332

Start:

206234  

End:

206565

Strand:

-

>Contig123_SINE-tRNA_23

GTCATCTAGATTTATTATTTATTGCAAATTATGAGAACTGTTACATAGATGATTTTACCACGGACAATTCCTTCCGACCCTTATTAGATCCACGAGAGACGACACTTCCTTCTCCATGCTCTTGATGGACACACTGACGACACTTCCCTCTCTACGTAGAATCACGGCGAACGGTTCTAATTGTACATCGCTGGAGACCTCTTGTAAACTTGCCTCCATTATCCTGCAAATTTGTTAATAAATCGCAGTATCTGAAACTCGAACCTTAAACCTCTTGATGTAGAAGTATTAATTAACCCTTAGTAAAACCATTGGGGCAAGGGGGCTTCCAC

Barbarea vulgaris (v1.0)

ID:

Contig1252_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

329

Start:

17400  

End:

17728

Strand:

-

>Contig1252_SINE-tRNA_24

GTCATCTAGATTTATTATTTATTACAAATTATGAGAACTGTTACATAGACGATTTTACCACGGACAATTACTTCCGACCCTTATTAGATCCACGAGAGACGATACTTCCTTCTCCATGCTCTTGATGGACACACTGAAGACAGTTCTCTCTACGTAGAATCACGGCGAACGGCTCTAATTGTACATCGCTGGAGATCTCTTGTAAACTTGCCTCCATTAATCTGCAAATTTGTTAATAAATCGCAGTATCTAAAACTCGAACCTCAGACCTTTTGATGTAGAAGCATTAATTAACTCTTAGCCAAACCATTGGGCCAAGGGGCTTCCAC

Barbarea vulgaris (v1.0)

ID:

Contig1279_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

6290  

End:

6448

Strand:

-

>Contig1279_SINE-tRNA_25

TTTGGATTATTAAAAGATTCTGGGCGCGAAATTCGTAATTCTTCATATCTGAAACCATAACATGTATGTAATATTAGTTTCGTCCCAAAATATCACTTGATCTTATAACTTCTAAGCTTTATCTAGGATAATTTTTCAGTTGAATTAAAGACACTTGGT

Barbarea vulgaris (v1.0)

ID:

Contig128_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

297

Start:

37258  

End:

37554

Strand:

+

>Contig128_SINE-tRNA_26

GTTAATTAATGATTCTACATCAAGAGGTATGTGGTTAATTCGAGTTTCAGATACTGCGATTTATTAACAAATTTGCAGACTAATGGAGACAAGTTTACAAGAGGTTTCGAGAGATCTACAATTAGACTCGTTCGCCGTGATTCTAAGTAAAAAGGGAAGTGTCGTTAGTGTGTCCATTAAGAGCATGGAGAAGGAAGTGTGATCTCTCGTGGATTTAATAAGGGTCAGAAGAAATTGTCCGTGGTAGAATCGTCTATGTAACAGTTCTCATAGTTTGCAATAAATAATAAATCTAGA

Barbarea vulgaris (v1.0)

ID:

Contig129_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

244

Start:

16142  

End:

16385

Strand:

-

>Contig129_SINE-tRNA_27

CATTTAGGTTTATTATTTATTGCAAATTATGAGAATTATTAAATAGACGATTCTACCACGAACAATTCCTTCCAACCCATATTAGATCCACGAGAGACGACACTTCAGTCTCCTTGCTCTTGATGGACACACCGACGACACTTCCTTCTTTACGTAGAATTACAGTTTCTGAGACTCGAACCTCAAACCTCTTGGTGTAGAAGCATTAGTTAACCCTTGGTTAACCAATGGGCCAAAGGCTTCC

Barbarea vulgaris (v1.0)

ID:

Contig1296_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

146

Start:

18814  

End:

18959

Strand:

-

>Contig1296_SINE-tRNA_28

ATCTCTCTAGGGCAAGATTCATACCATGTGATTTAACTTTCTTTCGGAGAGCAGACTTCTCCCAACGTGAATCGAACCCGCGACCCCTGAACCCCTACATTATCAACAATTCAAGAGCTTAACCACTAGGCCAATACAACGTTGGT

Barbarea vulgaris (v1.0)

ID:

Contig1303_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

85

Start:

14155  

End:

14239

Strand:

+

>Contig1303_SINE-tRNA_29

TAATAAGGGTCGAAAGGAATTGTCCGTGGTAGAATCGTCTATGTAACAGTTTTCATAATTTGCAATAAATTAATAAATCTAAATG

Barbarea vulgaris (v1.0)

ID:

Contig131_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

94

Start:

142547  

End:

142640

Strand:

-

>Contig131_SINE-tRNA_30

CCCACATGTGAAATCCGCAGTGGCCAGGACTCGATCCCCCGAGGCGGAACTTACAGCTGCAAGCCCTTTACCCCTGGACCACGAGGCCCTGGTT

Barbarea vulgaris (v1.0)

ID:

Contig1311_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

243

Start:

26212  

End:

26454

Strand:

+

>Contig1311_SINE-tRNA_31

TGCAAGCTCCCTTGGCCTAGTGGTTATCAAAGATTAATTAATGCTTATACACCAAGAGATCTTGGGTTCGAATTCCAGAGAGTGAGATTTATTATCATTTATGCAGATTAATAAAGGCAAGCTTACTGGAGATCTTCAGCGTGGTGCATGCAGAACCGTTTGACATGGAGGTTATCAGGCGGTAGAATTGTCCGTTGTAATATGTCATTGTAATAGTTCTCATAATTTGTAATAGAATAATAA

Barbarea vulgaris (v1.0)

ID:

Contig1316_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

172

Start:

22270  

End:

22441

Strand:

-

>Contig1316_SINE-tRNA_32

TTATTTATTTTTTATATTTTTTGAATAAATAAGAGGTTCTAGGCCTAAGCCCGTACATCTTCTAAGGCTCGGAACCAGAGCATGTTATATGGTCCTGTTCTAAGAGCCACTCGAACCAGCGACCTTTAGGCTTTGCCTGAGATCTTTACCAGTTGAGCTATTGGCTCTTGGT

Barbarea vulgaris (v1.0)

ID:

Contig1318_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

144

Start:

49691  

End:

49834

Strand:

+

>Contig1318_SINE-tRNA_33

ATCAAATATAGTTAGTTCTACTGATAAGGTACAAAAGGTAAAGCGTAAAGGTCACATGTATGAGTGGCACTTGAAAGGGACCATATTACATGCTCAGATTCCTGATCTGAGAGAATGTATGAATCTAAACCCAAAACCTCTTAG

Barbarea vulgaris (v1.0)

ID:

Contig1320_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

291

Start:

13734  

End:

14024

Strand:

+

>Contig1320_SINE-tRNA_34

GTTAATTAATGTTTTCACACCAAATGGACTGAGGTTCGAGTCTTGGATATTATAATTTCTTAAAAAATTTGTAGATTAATAGAAGCTAAGTTTAGAAGAGATCTCAGCAAAATACAATTAGAGTTGTTTACCATGATTCTAAGGAGGGAAGTATTGTCAGTGTGTCCATCAAAAGCATGGAAAAGGAACTGTCATCTCTTGTAGATCTAATCAGGGTCAGAAAAAATTATCCATAATAAAATCGTCTATGTAATTGTTCTCATAATTTGTAATAAATAATAAATTTAGATG

Barbarea vulgaris (v1.0)

ID:

Contig1326_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

14585  

End:

14687

Strand:

-

>Contig1326_SINE-tRNA_35

TTGCATCATTTAATCTGCAAGAAACGGCGTTTGTTGGGGTTCGTACCCCAAACTTGGTATAGAAACCTTTAAACCTTTAACCAATGGGCCAAGGATGCTTCTA

Barbarea vulgaris (v1.0)

ID:

Contig1350_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

136

Start:

18796  

End:

18931

Strand:

+

>Contig1350_SINE-tRNA_36

GTGGAAACCCTCTTGGCTCATTGGTTGACCAAAGGTTAATTAATGCATCTACACGAAGAGGTATGAGATTCGAGTATCAGATACTGCGATTTATTAAGAAATTTGCAGATTAATGGAGGTAAGTTTACAAGAGATC

Barbarea vulgaris (v1.0)

ID:

Contig1356_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

116

Start:

32107  

End:

32222

Strand:

-

>Contig1356_SINE-tRNA_37

CCTCCATTAATCTGCATAAATGATGATAAATTGTATTCTCAGTGATTCGAATTCTAGACCTCATAATGTAGAACCATTGTTGAACCTTAGATAACTACTAAGCCAAGGGGATTCCA

Barbarea vulgaris (v1.0)

ID:

Contig1357_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

175

Start:

66087  

End:

66261

Strand:

-

>Contig1357_SINE-tRNA_38

ATAATCCAGTATCCGACCACTTTGCGTGATCGACTAGCCCACTGGACCGAAGCCCAAGCCATGACAGAATTTTTAAGCGTCCACTTAAGGGCCCCTGTTTACGCTAAGTGGTCTGGAGGGTCGGGCCAACAACCCAGGTAAATTACCCGTGGCCACCGCATGTCGAACCCGGATG

Barbarea vulgaris (v1.0)

ID:

Contig1362_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

41423  

End:

41586

Strand:

+

>Contig1362_SINE-tRNA_39

ATCAAGTGTGGTTAGCTCGATGAGAAAAGTACTCTAGACAAAACTTAGAGGTCATAAGATCGAGTAACGTTTGAAACAAAATTAATATTATATGATGTGGTTTCAAGTCTGGGAGATTACGGGCTTTTGGCCAAAAAATTCTTAGTATTTAAAAAGAAAAGAAA

Barbarea vulgaris (v1.0)

ID:

Contig1364_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

16353  

End:

16519

Strand:

-

>Contig1364_SINE-tRNA_40

TTTTTTTTTTCTTTTTTGATCATCAGGAGTTTCTGGATCAAAATCCATAATCCTTCCAGACCCGAAACCACAACATGTAATATTAGTTTTGTCCCAAATGTCACTCGATCTTGTGACTTTTAAGTTTTGTCTATGGTAGTTTTCCCGTCGAGCTGACGACACTTGGT