Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_41Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
199Start:
25487End:
25685Strand:
->Contig1001_LTR-Gypsy_41
GTGGTGTCGACCGACACTAGTGGGTGGTGTCGACCGACACCAGCACCATGATTGCTTTCCAAATTTGCTCCAAAATCGCACGGGAACCCAAAACGTACCTAAACCTGCAAAAGACTCAAAAAGATTTTAGAAATACCAAAATACTTTATAAATAAGACTTATATCATGGTTGAAAACCGGTAAAAACCACGATATATCA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_42Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1072Start:
25824End:
26895Strand:
->Contig1001_LTR-Gypsy_42
CTTTCCTTTTCTTCTTTTTGTTCTTTTCTATTTTGTTTCTTTTCTTCTTTTTATAATACCTGAAATGCAAAAACAAAAATGACAAAAGCAAAGTAAAACTAAAAATGATAAAGAAAACTTACATGTGGGTTGCCTCCCACTAAGCAAACTTGTTTAACATTGTTGGCTCGACTGCAGTTGCCTTTTTAGGCCTGAGAAGAGGAAGTAGCCTTGGAATCACCATTCCCGCAGTTTCTTTGATATCTTCTTGGTTAGTTCCGGCTTCAATAAAAAGTTGTCCTCTTGTTGCGGTTTCGATAACTTTAGATGTAAGGAGAACTTCTTTGGAATGCCTTATCATCTCTTGGATTTGTTCCTTGCTTTCCTTGCTTAGCTCAGGAGGAACTATGATCTTGATCTTGGAGATTTGAGGCTGCTCGGGTGGTTTGGATAGTAGCTTCCTATTCTTCTTACGAGTTCCTCGGGTTCCCATCTCGGTTTTGTCGATTCCGGGGTCCAGGGACTCATCACTAGAGGAGCTATAACATTGAGAAGTAGTCACGGAGAATGCTGGATAAGAAAACTTCTTATTGACATTTGCAAAGATTGTCCGCTTGTTGTTATGGTCGATGATAGCACCAACTTTTGCGAGAAACAGTCTTCCCAAAATCAAAGGTCTCTCGGTCCGTTCATCCATATCAAGGATGTGAAAGTCCGTAGGGATAATGCAGTCACCCACGACTAGTTGTAGGTCACGAACTAGTCCGTCCGGGGTTTTCTGAGATGAATCTCCGAACACTAAGCTTAGGTTGGATTGAGATACATCTTGCAACCCAAGCTTCTCTGCAACATTTCTTGACATAACATTCACATTAGCACCAGATTCACAAAGAGAGTTAGAGAATTCGATGCCAGTTATGAAGCAGGACCAAACAAAACGCCCGGGGTCTTCTACTTTTGGTAGCCTCCTTAGAGGGTAACGTCATGGCTTGTCTTCTTCAACCATATGGGTCATGCGGATCATATCCTCATGGGAATCAAAGAGAGTTACCAACGGCTCGGTTTCACGGATAGTGAAGGCTGGTACGGTGGA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_43Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
342Start:
26902End:
27243Strand:
+>Contig1001_LTR-Gypsy_43
TGATAAAATCGTATTTTTACCACTTCTAACTCTTATTTTCTTTTGTTTTGAGATGTGTTTGGTATGATTTCATGGAAAATTAACTATTTATTAAGTATTTTCAGGTTCAAGAAGGTTTTAAAGGTTTTAAGGCAAAATGTCAAAGAAAAACCGTTTTTAGACAGTTTCAGAAAGCCAAAAGTATAATATCTTTTGAAAGACTTCCTGATACTAAAATTTGGAGTTCTTGGTGTCTCTGGAAAGCCAGAAGTGTCAAGTTTCACCTAGAATAAGAATAAATGCAATCCCTTTAGCCGTTTGTGAGATATTATCCGATGAGTGAAGCCCTGTCACGAACCGGTC
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_44Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
119Start:
27540End:
27658Strand:
+>Contig1001_LTR-Gypsy_44
GAGATCTTGGTGTCTACGGGAAGCTAAAAGTGTCCAGATTCACCTCAGACAAGAATCAATGCAATCCATTCAGCCGTTTGGGAGATACGACCCGATGAGTGAAGCACTGTCGAGACCGG
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_45Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
264Start:
27934End:
28197Strand:
+>Contig1001_LTR-Gypsy_45
GCTCCTCTTGCCGCCGCACCAAGTCTTTGAAGTCATCAACTCTTTTCTTCTCATCGCTTCTCCCTAGTCACTGTTCTCTACTTATTTAAGGAAGAAGATTCATCTCCTCTATATCGCAGATCAGATCTCTAAACCCTTTTCTCATACTTATAAGTTTATTCAATCTATTATCCATGTCTTTGATTTGCTTGAGTATGTGTGAGTAGTTTACTTGTTGGGTTTAAGAGTTTCAAAGGGGATTCATGTGGTCGATTTGTTAGGTTG
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_46Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
764Start:
28213End:
28976Strand:
->Contig1001_LTR-Gypsy_46
TGATATGCTCAAATTATCCCTCAGAGGTACTCTCTCAAATTAAGAGATCACAGTGGTACTTAGGGTTCGAATCCACAAAGACTATGTGGTTTCACAATAGAGGTGTTCGCTTCAAATCCAACTAAGCAATAGAGAAGTATTAAAATAACAATTGCACAAAAGGAAATAGAGATGTAAATCAATGGGAGGAAAGCGTAAGGTCTAGGGAAGTTCTCAGGAAATCAATCAAAGCAAGTAAAACAACTGGTCAAAAACTAATTAAGAATCGTTCTAGAACTCAAATCACTAATGCATAGCTAACCAACTGTCGTTGCGAAAACTATCTATGACATAAACCTAAGAGACCAACTGTCGTTGCGAATTCTAAAGTTCAGACAAGCTTTAAGTACAAGTTCGATATGTTCACAAGTTATCTAAACCAACTGTCGTTGCGAATATCTAACATGCTCACTAGGATTAGTTCAGATCTCAAATCACGCTGTCGCGCCAATTTAACAACCTAATATCATACTTCTAGGTGATCAAGCCAAAAGAAGCATTAAGTACAATCCTAGATGAAGAACTAACAAGTTTGAATCTTAACCAGTGTTAAACCTAACAAATCATGAAATCCCTTCTGAGAATCCCTAAACCTAACTAGGGATCTACTCAGACATATCAAATGAAAAACAAGACATAGCTGAAATAGATATCATATAAAACTGAATCAAAAGTAGAATAAAAAACAGGGGTTCAAGATCTTCTCTCAGAAGTACAAGTAGCAA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_47Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
194Start:
39894End:
40087Strand:
->Contig1001_LTR-Gypsy_47
AGCTTCCTCTGGAGATCTTGTGTTGAAATTCCCATTGCTCGCTGAATCTAGAGCCATCTGGTGCCTCCAATCAACTCCTCTGAAGAAAATACCCAACAACTGAACCTAAGAGAAACCATGATGTGGACAATCTCCCTGATAAGCTATGAAAGGAACCCATGCCGCCTTAAAAACCTCAGTAGGCCTCTGCGTAA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_48Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
244Start:
40436End:
40679Strand:
+>Contig1001_LTR-Gypsy_48
TTGTTCTTCTTTATCTCTTTCTTCTTCTTCTGTTTGCTTTGTGGGAGACAAGCTATCTTCTGTGACATCTATAGAGAAGTATCCTTCGAAACCCTTGGATATATTTGAATCGTTTATGATGTTGATTTTTATGATATCTATTGAGTTTCTTTGCATCATGAGCGAGTAGATCTCTTTGTTGGATTTTATGGGGTGATATTCAAGGGGAATTCACAGTTGGATTCATTTAGGTTGTTGATTTATA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_49Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
131Start:
41571End:
41701Strand:
->Contig1001_LTR-Gypsy_49
AGTCCATCCTTAAGATCTCCTGAAACAGAGAAAAACAAAAACCAAAATTAAAAAGAAGGTGTCCTAGACGTTACTCTAGTTCTTAGATCTGCAAACAAACAATCTCTCCCCGGCAACGGCGCCAAAAACCT
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_50Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
918Start:
41702End:
42619Strand:
->Contig1001_LTR-Gypsy_50
TGATACATGTGATATTTTGCTTCAGTCTTTTACCTTAAAGACCACATGATTACTGCAAGTGCACAGTAAACGTAAGTAGTATTTAAGGATCGAATCCCACAAGGAGAGAAGATGTATTGCAAAACTTATAGACCAAAGTATAGCTAGGACTCAATATAAGATTTGGTTGATTGTGTGTCACGGTAACAAGTAACGAAAGCAAGTCAAAGCGGTTGTAAAACTATAAAGAGAAACATTGGGCTATTAAGAGATCGCAGGGAGTTCCGAGATCTATCTATTCAAGTGAAACCTAAGACAAAGCATTCTTATTTCCAAGTCTCGGACATACGAAACACTAATGAACGATTAACCTTATTGCCTAGAGATAAACGTCTAAAATCTTTATACTCCATTACTTAACTCACGCAGGCAACGACGCATAGATCAAAGCATTATTAATGAGTTTGATTATAGTCCATGAAGTCATATAGGTAAGTGGTATGTGCTTCCTATAACACAACATTCATCCAACCTATTTTCTAGCACTTAGGCAAGCGATTAGCAAAACCAAACTACCTATGATCAGAGCTAGTTCAAGATGCTAACTACATGCATTATAAGCAAGCTTAGACCAAAAGAACAGTATAAACGATCATACAAGACTCAGATCTTGCCACCTAAACCTATGGATTCATTGCCCCCTTTGATAGTCCTTTTAAACCCAACAAGAAAACTACTCAAACATACTTAAAGGAATCATCAAAGCAAGGTTTCAACAATTCATAAGCATAAACTGAATAGATATAAGAATAAGGTTCAGAGATTACTTCTTTAAAAGGGTCTACAAGATGCAAAGACTATTCCTTAAGAACAAAGAATGAATAAGAGAAAGAGATGATGAACTTCAAGAAATTTGCAAGAGAGGGGAGGTGGCTGCTC
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_51Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
147Start:
42803End:
42949Strand:
->Contig1001_LTR-Gypsy_51
TTTTGGTCCATTTTGCCTTAAAACCTTCAAAACCTTCTTAAACCTGAAACAAGTGATATTTGGCTCTTTTTCCAAGGTATAACACCAAACTCTTCTCAAAAGTATAAGTAACCAATGGCTATAATAGGTAAAAATACGATGTTATCA
Barbarea vulgaris (v1.0)
ID:
Contig1001_LTR-Gypsy_52Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
136Start:
42925End:
43060Strand:
->Contig1001_LTR-Gypsy_52
AATAGGTAAAAATACGATGTTATCAACTCCCCCAGACTTAAACCTTTGCTTGTCCTCAAGCAAACAAGAAGGCAAAGTTGTAGAAAAGTGTTTTTGAAAATCACAGGAACTCACTTATATGTAGGAATCTTGTCTT
Barbarea vulgaris (v1.0)
ID:
Contig1002_LTR-Gypsy_53Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
129Start:
45675End:
45803Strand:
+>Contig1002_LTR-Gypsy_53
CTCAATCAAGAGGTTATAGCATTAAATGCGGAATCAAAACAGACGCATTTAAAAGAAACCATGGATTTAATTAGCACATTTAATCTTTTTGATGTATAAATACAAGACCCCATAACATTGTGAAGGGGA
Barbarea vulgaris (v1.0)
ID:
Contig1005_LTR-Gypsy_54Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
678Start:
9End:
686Strand:
+>Contig1005_LTR-Gypsy_54
GATCTATAGGTTTAGGTGGCGAGATCTGTAGCTTTGCATGATTCGTTTACACTTTTCTTTCGGTCTAAGCTTTCTCTTAATGCATGTAGTTAGTGTCATGAACTAGCTCTGATCACAGATACTTATGTTTTACTAATCGCTTGCCTAATTGCTATAAACTAGCTTGGATGAATGTTGTGATATAAGAAGCACATTCCAGTTACTTATAGGGCTTAATGGACTAGAATCGAACTCGTTAATAATGCTTTGATATGTGCATCGTTGCATGTGTGAGTTGAGTAACGGAGTACAAGGATTTTAGACTATTATCTCTATGGATTATAGGTTAATTGTTCATTATGTTTTGTATGTCCGAGACTTGGAAGTAAACATGCATTGTCTTAGGTTTCTCTTGAATAGATAGATCACGGAACCCCATGCGATCCCTTGAATGCCCAATGCTTTCTCCTATTGATTTACATTCGTTTTTATTGTTTTTATTTCGTTACTGCAATCGTGACACACAAAACCCATTTTTCTTATTATCGTTCTAGCCTTACTCCGGTCCATAAGGTTTGTAATACAACTTCTCTCTCTGTGGGATTTGATCTTTAGATACTACAGACGATTCACTGTGCACTTGCAGTAGTCGTTTGGTCTTTTGAGGTTAAAGACTGAAGCGAAAATACACACGCATCA
Barbarea vulgaris (v1.0)
ID:
Contig1005_LTR-Gypsy_55Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
129Start:
687End:
815Strand:
+>Contig1005_LTR-Gypsy_55
AGCTTTTTGGCGCCGTTGCCGGGGAGAAATTATTTGTTTGCAGATCTAAGAACTAGAGTAGCGTCTAGGACACTTTGCTTTTAATTTTTCTTTTTGATTTTCTTTGTTTCAGGAGACCTTGAGGATGAA
Barbarea vulgaris (v1.0)
ID:
Contig1007_LTR-Gypsy_56Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
134Start:
271End:
404Strand:
+>Contig1007_LTR-Gypsy_56
TGATATTCTTATGACGAAATGAGTTTCTGCGTTTTCAAACTTCTTTCTCTGGTTTAGTTTTCTGTTTTGCTTGAGGGCAAGCAAAAGCTAAGTCTGGGGGAGTTGATATATCATGGATTTTACCGGTTTTAAGC
Barbarea vulgaris (v1.0)
ID:
Contig1007_LTR-Gypsy_57Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1171Start:
374End:
1544Strand:
+>Contig1007_LTR-Gypsy_57
TGATATATCATGGATTTTACCGGTTTTAAGCCATGATATATTGCTTTATCGAGTCTTAACCGTGTCTTTCGAGTCTTTCTCGAGCCTTTTACAGGTTTTATGAGTTTGGGACTTTTTGGATGATTATGGAGCATTATGGAGCATTTGTTGCTGAGAAGACGAAGGCGATGCTTTCAGTGATCAGTGGTGTCAAAGATACTCATCACTGGTGTCGGTCGACACCCATCGTTAGGCGTCCATGCGGAAATTATCAAGTTCTGATGGTTTGCAGTTTTGCCCCAGAAGTTGCAGGAGTTTACAAAAGAGACTCAGCTCGTGTATTAGTCTATATATTAGGTTTTTAGGTTAAGTTGGAGAATCAATCATCTAGCTTCTGTCATCTTTTATTCTATCTATTCCTTTGCTTAGGGGCTGATCTTGCTACTTGTACTTCTCAGAGAAGATTTTTAACCCCTGTTTCTTTATTCTACTTTTGATTCAGTTTGTGATATCTATTCCAGCTATGTCTTGTGTTTCATTTGATATGTCTGAGTATATCCCTTGTTAGGTTTAGGGATTCTCATAGGGATTTCATGATCTGTTAGGTTTAACACTGGTTAAGATTCAAACTTGTTAGTTCTTCATCTAGGATTGTACTTAATGCTTCTTTTAGCTTGATCACCAACAAGTATGATATTAGGTTATTAAATTGGCGCGACAGTGTGATTTATAATCTGAACTAATCCTAGTGAGCATGTTAGATATTCGCAACGACAGTTGGTTTAGATAATTGTGAACATACCCAACTTGTACTTAAAGCTTGTCAGAACTTTAGGATTCGCAACGACAGTTGGTCTCTTAGGTGTATGTCATAGATAGTTTTCGCAACGACAGTTGGTCAGCTATGCATTAGTGATTTGAGTTCTAGAACGGTTTTTAATTAGATCTTGACCATTTTTTTCTTCCTGCTTTGATTGAATTCCTGAGAAGTTCCCTAGACCTGACGTTTTTCCCCACTTGATTATATCCTTATTTACTTTTCTGCAATATGTCTTTCAATACTTATTTACTGCTTAGCTGAGCTTGAAACGAAAAAGTCTACTGTGAAACCACATAGTCTCTGTGGATTCGAACCCTAAGTACTACCGTGATCTCTATATTTGAGAGAGTAGCTCTAGGGTTAATTTGACCC
Barbarea vulgaris (v1.0)
ID:
Contig1007_LTR-Gypsy_58Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
743Start:
1556End:
2298Strand:
->Contig1007_LTR-Gypsy_58
GACCAATGCTTCCTCGTTTTTCCTACTGTTTTCTCCAAGATCCTTTTGATTTCTCTATTGAACACCTCCACTTGTCCACTGATCTGAGGGTGATAAGGTGTAGCAACCTTGTGTCTCACTCCAGATTTCTTCGAAAGATTCTCAAACACTTTGTTGATGAAGTGGGAACCTCCATCGCTAATCACAATTCGTGGAACGCCAAACCTTAGAAAAATGATTGACTTGAACATCTTCATTACTACTTTTGCATCGTTTGTGGGGCTGGCAAAGGCTTCCACCCACTTAGACACGTAGTCAACAGCAAAAAGGATGTATCTGTTTCCATATGATGAAGGAAAAGGACCCATGAAGTCAATTCCCTAAACATCGAAAACTTCGACTTCTTGTATGAAGTTTTGCGGCATCTCATTCCTTTTGTTGATGTTCCCTTTTCTTTGGCAAGCATCACACTTAGATATAAAGCCATGGGCGTCCTTTAACATTGTTGGCCTCCAAAAACCAGCTTGTAATGCCTTAGAGACTGTTTTGTAAGTGGTGAAGTGTCCACCATAGTCTAATCCGTGATAAGCAAAGAGAATACCTGGAACGTCTTCTTCTGGAATGCATCTTCTAAACAATTAATAAGAACACTTCTTGTATAAATAAGGCTCATCCCAACAGTATCTTCTAACCTCACGCAAAAACTTTTTCTTCTTGTAACCAAAGAATTGAGGAGGCTCGACATCTGCAGCTAAGTAGTTAAC
Barbarea vulgaris (v1.0)
ID:
Contig1007_LTR-Gypsy_59Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
386Start:
3866End:
4251Strand:
->Contig1007_LTR-Gypsy_59
TCCTCCATAAAAAGTTCCTAACAAACTCAGTTCATTGAACTGATGGTGAGGAAAATCTCTTTTGTATTCTTCAAAACGTTCTACAGCCTCATGGAATGGTTTATTTGATCCTTGGTTAAAGTCCCAAATTCTCCTCCTCATACGGTCTAATCTATTCCTTGTGTAGAACTGCTTGAAGAAAGTTCGCTTGTATTCTTCCCAATTAGTGATTGACCCTGGGAGAAGAGACTTTATCCATTTATGAGCTTTCTCAACCAAAGAGAATGAGAATAGCATGCACTTCAAGTAGTTTTCGGAAACTTCATTGGATCTCCTCGTACTGCAGATTTCTTCAAACCTCTCGATATGATCTACGGGGTTTCCTTGATCCAAACCACGAAACTGAT
Barbarea vulgaris (v1.0)
ID:
Contig1007_LTR-Gypsy_60Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
260Start:
4562End:
4821Strand:
->Contig1007_LTR-Gypsy_60
TCAGGTTTTAACCTTGAATAACACAACGATAAGGCTGCAAGTGCACAGCAAATCGGTTGTAGTACTTAAGGTATCGATCCCACAGAGACCAAAAAGCTACACGGCGAGTTTTCTAGTTAAGGGTAAGGCTAAGACAAAATAAATGGGGGCTGGTTCTGGGTTTTTATAACGAACGAAAATAGAAAGCAAGCAATGAATAAAGCGATGTAAATATTAATAAAAGAAGTGTTGCGCCGTAGGGAATTCTCAGGGTATCATGG