ID Class Order Superfamily Length Start End Strand View
Contig1020_LTR-Copia_81 RetrotransposonsLTRLTR-Copia1334887249004+
Contig1021_LTR-Copia_82 RetrotransposonsLTRLTR-Copia1262168121806+
Contig1021_LTR-Copia_83 RetrotransposonsLTRLTR-Copia8192179822616+
Contig1021_LTR-Copia_84 RetrotransposonsLTRLTR-Copia1582347723634+
Contig1024_LTR-Copia_85 RetrotransposonsLTRLTR-Copia1271258012706-
Contig1024_LTR-Copia_86 RetrotransposonsLTRLTR-Copia1162045620571-
Contig1025_LTR-Copia_87 RetrotransposonsLTRLTR-Copia20351475349-
Contig1025_LTR-Copia_88 RetrotransposonsLTRLTR-Copia1801299513174-
Contig1025_LTR-Copia_89 RetrotransposonsLTRLTR-Copia1323308733218+
Contig1029_LTR-Copia_90 RetrotransposonsLTRLTR-Copia1083811438221+
Contig1029_LTR-Copia_91 RetrotransposonsLTRLTR-Copia1264024740372+
Contig1029_LTR-Copia_92 RetrotransposonsLTRLTR-Copia2814384944129-
Contig1030_LTR-Copia_93 RetrotransposonsLTRLTR-Copia952324923343-
Contig1030_LTR-Copia_94 RetrotransposonsLTRLTR-Copia1113044530555-
Contig1031_LTR-Copia_95 RetrotransposonsLTRLTR-Copia822492025001+
Contig1033_LTR-Copia_96 RetrotransposonsLTRLTR-Copia161827034320+
Contig1033_LTR-Copia_97 RetrotransposonsLTRLTR-Copia104446305673-
Contig1033_LTR-Copia_98 RetrotransposonsLTRLTR-Copia68059046583-
Contig1033_LTR-Copia_99 RetrotransposonsLTRLTR-Copia2004298343182-
Contig1033_LTR-Copia_100 RetrotransposonsLTRLTR-Copia2144575745970-

< 5 6 7 8 9 > Total 318


Barbarea vulgaris (v1.0)

ID:

Contig1020_LTR-Copia_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

133

Start:

48872  

End:

49004

Strand:

+

>Contig1020_LTR-Copia_81

TGACCCCATTATTTTACTTGAGATTGAGATGATCACGCAAAGGCGGAAGTGAGGGATAGGAAAATTTCCCATGACCCCATTATTCATTACACCTTTGAGTTAAAGAAAAAAAAAGTAGAAAAAGAAGAAAAAG

Barbarea vulgaris (v1.0)

ID:

Contig1021_LTR-Copia_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

126

Start:

21681  

End:

21806

Strand:

+

>Contig1021_LTR-Copia_82

ATATAAACTTTGGAAAGGTAAAGTACATTTGTACAAATACCTGAAAGTGTGGGGGTGTCTTGGAAAAAGTCAAAATACCACTTCCTATGGTCATAAATTGACCAAAACCAATGAATTATATTTCAT

Barbarea vulgaris (v1.0)

ID:

Contig1021_LTR-Copia_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

819

Start:

21798  

End:

22616

Strand:

+

>Contig1021_LTR-Copia_83

ATATTTCATTATGAGAGAAACCAGTCCCGACATTACGTGTACACTGTGATAGTCAATCGGAACACTGAATAATCTTTATAATGGTAAGTCTCGTCATATTAGAAGACGTCATAAAACCATTAGACACTTGATCTCAAGTGGTGTAATTATGATTGATTACATCAAATCAGCCGACAACCTAGCGGATCCATTTACTAAAAGTTTGGCTTGGGATCAAGTTTTGAAATCATCAAAGGGAATGGGTTTATTGCCTATAACCAAAGAGGATGTTTGATGGAAACCCTACTTACGTAACTGGAGATCCCAAGAAGTAGGTTCAAAGGGACAACTAAATCAAACAAACTCTATTACAAGCACTGATAGACTTTATGTCACTGCTCAGTTCCCAAGATGATAAACAGTGCTTCATGTATATAAACAAGGATAAGCATTAGCTTTTAATGATTCGCGTCCATAGCTTTGTACGTGGAGTATTACAAGATACTTCTTAAAGCAAATACTAGTGGCGATCACCTAGTGAGTGTGAAATGAGGCCGTTTCTAGTAGAATGAAGTTCAGGCTATATTCTCTAAGTTCACTCAAGAATAACCATGCAAGTTCAAGGCCACAATGAACACAATAGAGAACAAAGTTCTACGAGAAAATAAGCTGGGTTATATATGTTGTCTCAGTTTACATAAAAATCCGGGTGGTTCAAGACATCATGTTCACCTCCTGGCCGAGTAAACCCGATAGATATTTACAATAAATGGTTCAAGGCTGGAATATGCCACCATCTCAGATACAGTAAATTTTCGTTTATACTCTCGAAATGTCCTA

Barbarea vulgaris (v1.0)

ID:

Contig1021_LTR-Copia_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

158

Start:

23477  

End:

23634

Strand:

+

>Contig1021_LTR-Copia_84

TCTGAGAGTATAGCGTAGTATTGAGTTCGTATATTCCGTCTTTCGAGTGTAGCGAATTCGGTCTCTAAGTGGTTGTATCCTGGGATTCTGAATCGTATCAAAACCGTCACACTACGGGCGATTTTAAGAATTAAGGAAAGAGATCAAATCTCGACTCC

Barbarea vulgaris (v1.0)

ID:

Contig1024_LTR-Copia_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

127

Start:

12580  

End:

12706

Strand:

-

>Contig1024_LTR-Copia_85

TTAAGATCGATCGATCCCAACTTGCGGGATTTACTCAGATCGATCGATCCTGGCCGGCCGTGAGTTTACCAGATCGACCATCCCACCTCCAGATCGATTGATCCGTCTTGGATCGATCGATCTAGCC

Barbarea vulgaris (v1.0)

ID:

Contig1024_LTR-Copia_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

116

Start:

20456  

End:

20571

Strand:

-

>Contig1024_LTR-Copia_86

TTTTCTTTATTAGACATTTAAACAATCCAAATATATGTTTAATCAGACTGCCACATAATAGAAAACAATACTACGTTACTGATCAATTTCTAAGCTATCCAATTTCTCACAACACA

Barbarea vulgaris (v1.0)

ID:

Contig1025_LTR-Copia_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

203

Start:

5147  

End:

5349

Strand:

-

>Contig1025_LTR-Copia_87

TTTTTAACTTTTTTTTTTTTTTTTTTTTATAACTCAAAGGTGTAGTGAATAATGGGGTCACGAGAAATTTTCCTACCCCTCACGTCCACCTCTGCGTGATCATATCAATCTCAAGTAAAATAATGAGGTCACGAGAAATTTTCCTACCCCTTTACTCAAGAGAGAATCATATCATCTTTTATGCTTTTATTCTTTTTTTCTTT

Barbarea vulgaris (v1.0)

ID:

Contig1025_LTR-Copia_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

180

Start:

12995  

End:

13174

Strand:

-

>Contig1025_LTR-Copia_88

GGATCGATCGATCTGGTCGGGAACGATCGATCCTGGTGGGATCGATCGTTCGGTTAAGGTCACGGCAAGGTGGGATCGATCGATCCTGACCAGGATCGATCTATCTGGTGTGTTCGGCGAGGTCTCGGCGTGTGGGATCGATCGATCCTGGCCAGGATCGATCGATCTGGTCGTTCTGGC

Barbarea vulgaris (v1.0)

ID:

Contig1025_LTR-Copia_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

132

Start:

33087  

End:

33218

Strand:

+

>Contig1025_LTR-Copia_89

GATCGATCGATCCAAGGTCGGATCGATCGATCCAATTCAAGCAAACTTGCGGTGAGAATCAAGATCGACCAGAGCACATCAGATCGATCGATCTAGAGTCAGATCGATCGATCCAAGACCAGATCGATCGAT

Barbarea vulgaris (v1.0)

ID:

Contig1029_LTR-Copia_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

108

Start:

38114  

End:

38221

Strand:

+

>Contig1029_LTR-Copia_90

GAAATGGAGATTGATCGATCCTCCATTGACATCGATTGATCTCAGCAGAATTTTAATGAGATGGATGTTGATGAGGATCGACCGATCTCCTCTAGGATTGATCGGTCC

Barbarea vulgaris (v1.0)

ID:

Contig1029_LTR-Copia_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

126

Start:

40247  

End:

40372

Strand:

+

>Contig1029_LTR-Copia_91

ATAGAGATCGATAGATATACACTATGGATTGATCGATCCCTGAAACAGAGAAGTCGAGAAAAGATAGCTGGATAGATCAATCTCTCATAAGGATTGATCGATCTACATACCTGCATTCGTTGGGTT

Barbarea vulgaris (v1.0)

ID:

Contig1029_LTR-Copia_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

281

Start:

43849  

End:

44129

Strand:

-

>Contig1029_LTR-Copia_92

AATCAGTGATGAACGTCACGGTAGAACGAACCCTTGGTTCTATAGAGGTACGGATCCAACCAACGATCATCGAGTTCACCGAGAGCCAAAGCTCGAGGTTAGGATCATGCGACAATGGTTTTGGAATGGTTCCATCGATGAAACCTATCTTCCGTTTAGCACGAAGAGCATTGGTCATCTCACCGGACCATTCACTGTAGTTCTCGCCGGTTAACATAACCGCCGTTATCAACGCACCGGGATTGTCGGATGCGAAGAGAGAGTACGGAGCTGGTTCAGGA

Barbarea vulgaris (v1.0)

ID:

Contig1030_LTR-Copia_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

95

Start:

23249  

End:

23343

Strand:

-

>Contig1030_LTR-Copia_93

AGATGGTGGTGATGCTGGTACTGAAAACAATGATGATGATGGTGTTCATGCCCATGGCGATGATGATGATGATAATGATACGTTGACAAGTAGGA

Barbarea vulgaris (v1.0)

ID:

Contig1030_LTR-Copia_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

111

Start:

30445  

End:

30555

Strand:

-

>Contig1030_LTR-Copia_94

TGAGATGATGAAGAAGAAGAAAAATGGGAGCACACAAACGATTTAACGAGTTCAGCCACCAATGAGGTTAAGCCTACATCTCGCCGGGAACTGTGTCCCGGAATCAACTAA

Barbarea vulgaris (v1.0)

ID:

Contig1031_LTR-Copia_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

82

Start:

24920  

End:

25001

Strand:

+

>Contig1031_LTR-Copia_95

GGGTTTTTCTCGGGAAAGGTTTTAATGAGGCAACATCCAAAGCGCATTACGAGCTCTTAGAGTTGTGGCATCCAAGGGGGAG

Barbarea vulgaris (v1.0)

ID:

Contig1033_LTR-Copia_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1618

Start:

2703  

End:

4320

Strand:

+

>Contig1033_LTR-Copia_96

CATTCTCAAGGGAGTAAACTACATGGTTTGGTCAAGAACCACCAAATCAGCTCTATATGGCAAAGGTCTATGGAGTCACATTGAAAAGGGAGTATCTTCAAAGGAGGCTGCCGAGATAGGGAATGACAAGAAGCCCGTCAATGAAGAAGAGCAAGAGAGATGGCTCCAAGAGGACCACAAGGTTCTCTACTATCTTCAAAACTCTCTGGAATCGTCCATCCTTGAAGCCTACTCATATTGTGAAACGGCTAAGGAATTGTGGGATACCTTACAAAAGGTTTATGGAGACACATCTAACCTTCACCGTGTCTTTGAAGTCAAGAAAGCTCTCAACGCCCTCACCCAAAATGGAGTAGAGTTCAAACATCATTTTGGGAAGTTTAGGTCACTATGGGCTGAGTTAGAAATGTTGAGACCAAGCACCATTGATCCTAAAGTGTTAAATGAACGGCGTGAACAAGACAAGGTCTTCGGATTACTCATGACGCTAGACCCATGCTTCAACAGCCTTATTAAGCATATTTTAAGGGCTGACAAGCTTCAAAGTCTAGATGAAGTCTGTTCACAAATACAAAAGGAAGAAGGCTCGGTTGGTCTCTTTGGTGGAAAAGGCGAACTTGCTATGGCAAATAAAGGAGAACTCGCAACCGCTAACAAAGGGAACTACAAGTATGACAACCACTACAAACGAGGACCTCCCTGTTCATGTGAGTATTGCAAGAGCAAAGGATTCAACCCAACACATGCAAAAGATAAGTGTTGGAGGCTCTACCCTCATCTTCGACCGGAACACCATGGAGGTGGAAGAGAGTCAAGAACTAATCAAACCAGAGAAGGAAGTGGAGCGGGCATGGCGGCATCTTCGGAGTTTGTCCGCAAAGCTGACCTAGATGCTCTCATCAAAGCCCTCAAAGAGAATAACGGTAACATTTATCAAAGTTTTAAATCTCTCATGGAATCAAAACCGATTATTATAGATTCGGGTGCCTCTCACCATATGATTAGTGATGCTAAACTCATAAGTAATATAGAACCTGCCCTAGGTAATGTGATCATAGCAAATGGAACTAAAATACCGGTAAAAGGAATTGGTAGCCTAAACATATTTGATCATAAATCTGATGTTTTTTACATGTCCACATTTACATCCAATTTACTATCCGTAAAAAAGATTACTAATGACCTTGATTGTTACGCAATTTTTGGACCTAATGATGTACATTTTCAGGATATTAAAACAAGCAAAATGCTTGGTCAAGGTGCTTCAAAAGACGGATTATATGTTCTTAAGGATACAAACCAATCCATCCCTTTATCTTTATATTTAAGTTCTGTTGTTGTGTGTGCTAATAACGCAATATGGCATGCTAGATTAGGACATCCTCATTCTCGTGCCTTAGGGTTATTATTACCTAGTCTTTCCTTTAAAAATGATAAATGTGAGGCTTATATACTCGGTAAACACTGTAGAACCGTGTTCCCCAAGTCTCTTACTATCTATGAGCAATGTTTTGATTTAATCCATTCGGATGTGTAGACTTCTCCATGTGAATCAAGAGAGCATCATAAGTATTTTGTTACATTCATTGATGAGAAATCTAAATATACTTTTAATTTT

Barbarea vulgaris (v1.0)

ID:

Contig1033_LTR-Copia_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1044

Start:

4630  

End:

5673

Strand:

-

>Contig1033_LTR-Copia_97

CTCCCTTATTGTTAGTCTTGTAAGCGTCTATAGTGGAGTTTTGGCTGGGTTTTGGCTCCTATTTTCCCTGCCTTTTCTCAACAGATCAAGTGCATATTTTTCCTTTGAGGATAAAAATAGCCTTTTTTTGATCGACTTACTTCTATTCCAAGAAGTATTATAGTTCTCCAGATCTTTTAATTCAAAATGGATTTAAAGATATGATTTGGGTTTCTTGTATGCCTCCTTGTCATTCCGGAGATGATAAGATTCACTCTAACATATTACGAGAATGACTATAATACCTTCGTTGGCTTTTTGGATGGTGAAGAGGGTATGATCAGCTTCTGATTTCTGAATCCTCTATCCAACAGATTAGCTAAGTGTGATACGCCCCTGGAAGATGTTTTTAAACCATTAGATCGCCTTTTGAGTCTTAATTTTCCTTGGTTTCATCATGACTTCTAGGCCAGGGGGAGGTGGTTTCATATAACTTCATCTTCAACTTCTCCTTGGAGGAATGCATTCCTTAACTCCATCGTGCCAAAGATACCCAATTCCAAGTTAGTAGGCTAAAGATAGTCAACTCTTATTGTATTGGAGTTTTGCAACCGGTGCAAATGTGTCCATGTATTCTTTTCTCCATGATGTTTGTGTAGATCCTCTCGCCACCAGTCTTGCTTGTACGCGTTCAATCTCCCCTCACTTTTTGTACTTTATTGCGTGATAACACGAGACCTTACCGCTTTCTTCACCTTTAGGTAATCGGCTTCATCCCATGGTATTATTTATTTCCATGGCATTGTTTCTTCTTCCTTATTGCGACGTTTCTCCAACTTCATGTCTTTTGCTTCATCATAGGTCTCTGTATCCAGTTCTTGGTCTATTTGGAGTGTGAAGGAAAGCCTTGATGTTTTAAAGGTAAATACGCGAGTGCAACCTGGCTTGAATAGGTGGAGCAACGGCCTTGTTTGTTGGTTTCAAACCGTTTTGTTTTCCATGTATCCGGGGACGAACTTTGAGCCTTTCACTTCTTCTTAGGGAAGGTGGTTGCTGGTGGTGTAG

Barbarea vulgaris (v1.0)

ID:

Contig1033_LTR-Copia_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

680

Start:

5904  

End:

6583

Strand:

-

>Contig1033_LTR-Copia_98

CAGGTCTTTCTAGGATACTTCTAAGGTTACTTGCACGATCGGATGTGAGAATGAGCTAAGCTTTCAATATCCTTCCAATTCTTTTCCATGTAGTACTCATTGTCCTCAAGAAACTTCACATCTTGTGAGACACACACTCTTCTTGCCTCCGCATGTAGCATTTTGTACCTTTTTGTGTTGTTGAAGTATCAGATGAACATTCCTTTGGTCACTCTTAGCTTCAAGCTTATCTCGCCTTTCTCCTGGTATCAATACATAACCACACATCCAAAACAACGTAAGTGATTAATGAATGGTTTAGTTTTGTTCAATACCTCGAATGGTGAAGACATCTCCAAGGTTTTAGTTGGGGTTCGATTGATCAAGTAGCATGCGGTCGTCAGCATCACTCCAAAAATGTTTAGGTACATTGTATGAAACATTATGATCTTGCCACCTCCATCAAATGCCTATTTTTCCTTTCAGCCACTCCATTTTGTTGTTGGGTGTATATGGCAGCTTGTTTGATGTATGATTCCATATTTATTGAGGTGTTGTCGAAAAGCAATTGCTTGTGTACTCGCCACCATTATCTGATCTTAAATCTTAATCTTGCCATTATAGTGATTAGTAAACATAGTTTTGAAAGTTTATAAACGCCTCAAGCAACTCTATCCTTAGATGGAAGCAATGTTAACCAA

Barbarea vulgaris (v1.0)

ID:

Contig1033_LTR-Copia_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

200

Start:

42983  

End:

43182

Strand:

-

>Contig1033_LTR-Copia_99

TTATCTTTTTTTCTGTCTTCTCTTTTAATTCAAAAGTGTAGTGAATATGAGGTCACGGGAATTTTCCTAACCCCTCACTACCACCTCTGCGTGATCATCTCATCTCAAGTAAAATAATGAGGTCACGGGAATTTTCCTACCCATTTACTCAAGATGAGAATCATATCATCTTTTGGCTATTTATTATTTATTTTTTCTTT

Barbarea vulgaris (v1.0)

ID:

Contig1033_LTR-Copia_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

214

Start:

45757  

End:

45970

Strand:

-

>Contig1033_LTR-Copia_100

CTTTCTTCTTTTCTTTTTTTTTCTTTTTAAAATTCAAAGGTGTAGTGAATAATGAGGTCACGAAAAATTTTCCTACCCCTCACTGCCACCTCTGCGAGATCATCTCAATATTAAGGAAAATAATGATGTCACGGGAAATTTTCTTACCCTTTTACTCAAGACGAGAATCATATCATCTTTTCTGCTCTTTATTTTTTTCTTTTCTTTTTTGTTT