Barbarea vulgaris (v1.0)
ID:
Contig1020_LTR-Copia_81Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
133Start:
48872End:
49004Strand:
+>Contig1020_LTR-Copia_81
TGACCCCATTATTTTACTTGAGATTGAGATGATCACGCAAAGGCGGAAGTGAGGGATAGGAAAATTTCCCATGACCCCATTATTCATTACACCTTTGAGTTAAAGAAAAAAAAAGTAGAAAAAGAAGAAAAAG
Barbarea vulgaris (v1.0)
ID:
Contig1021_LTR-Copia_82Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
126Start:
21681End:
21806Strand:
+>Contig1021_LTR-Copia_82
ATATAAACTTTGGAAAGGTAAAGTACATTTGTACAAATACCTGAAAGTGTGGGGGTGTCTTGGAAAAAGTCAAAATACCACTTCCTATGGTCATAAATTGACCAAAACCAATGAATTATATTTCAT
Barbarea vulgaris (v1.0)
ID:
Contig1021_LTR-Copia_83Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
819Start:
21798End:
22616Strand:
+>Contig1021_LTR-Copia_83
ATATTTCATTATGAGAGAAACCAGTCCCGACATTACGTGTACACTGTGATAGTCAATCGGAACACTGAATAATCTTTATAATGGTAAGTCTCGTCATATTAGAAGACGTCATAAAACCATTAGACACTTGATCTCAAGTGGTGTAATTATGATTGATTACATCAAATCAGCCGACAACCTAGCGGATCCATTTACTAAAAGTTTGGCTTGGGATCAAGTTTTGAAATCATCAAAGGGAATGGGTTTATTGCCTATAACCAAAGAGGATGTTTGATGGAAACCCTACTTACGTAACTGGAGATCCCAAGAAGTAGGTTCAAAGGGACAACTAAATCAAACAAACTCTATTACAAGCACTGATAGACTTTATGTCACTGCTCAGTTCCCAAGATGATAAACAGTGCTTCATGTATATAAACAAGGATAAGCATTAGCTTTTAATGATTCGCGTCCATAGCTTTGTACGTGGAGTATTACAAGATACTTCTTAAAGCAAATACTAGTGGCGATCACCTAGTGAGTGTGAAATGAGGCCGTTTCTAGTAGAATGAAGTTCAGGCTATATTCTCTAAGTTCACTCAAGAATAACCATGCAAGTTCAAGGCCACAATGAACACAATAGAGAACAAAGTTCTACGAGAAAATAAGCTGGGTTATATATGTTGTCTCAGTTTACATAAAAATCCGGGTGGTTCAAGACATCATGTTCACCTCCTGGCCGAGTAAACCCGATAGATATTTACAATAAATGGTTCAAGGCTGGAATATGCCACCATCTCAGATACAGTAAATTTTCGTTTATACTCTCGAAATGTCCTA
Barbarea vulgaris (v1.0)
ID:
Contig1021_LTR-Copia_84Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
158Start:
23477End:
23634Strand:
+>Contig1021_LTR-Copia_84
TCTGAGAGTATAGCGTAGTATTGAGTTCGTATATTCCGTCTTTCGAGTGTAGCGAATTCGGTCTCTAAGTGGTTGTATCCTGGGATTCTGAATCGTATCAAAACCGTCACACTACGGGCGATTTTAAGAATTAAGGAAAGAGATCAAATCTCGACTCC
Barbarea vulgaris (v1.0)
ID:
Contig1024_LTR-Copia_85Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
127Start:
12580End:
12706Strand:
->Contig1024_LTR-Copia_85
TTAAGATCGATCGATCCCAACTTGCGGGATTTACTCAGATCGATCGATCCTGGCCGGCCGTGAGTTTACCAGATCGACCATCCCACCTCCAGATCGATTGATCCGTCTTGGATCGATCGATCTAGCC
Barbarea vulgaris (v1.0)
ID:
Contig1024_LTR-Copia_86Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
116Start:
20456End:
20571Strand:
->Contig1024_LTR-Copia_86
TTTTCTTTATTAGACATTTAAACAATCCAAATATATGTTTAATCAGACTGCCACATAATAGAAAACAATACTACGTTACTGATCAATTTCTAAGCTATCCAATTTCTCACAACACA
Barbarea vulgaris (v1.0)
ID:
Contig1025_LTR-Copia_87Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
203Start:
5147End:
5349Strand:
->Contig1025_LTR-Copia_87
TTTTTAACTTTTTTTTTTTTTTTTTTTTATAACTCAAAGGTGTAGTGAATAATGGGGTCACGAGAAATTTTCCTACCCCTCACGTCCACCTCTGCGTGATCATATCAATCTCAAGTAAAATAATGAGGTCACGAGAAATTTTCCTACCCCTTTACTCAAGAGAGAATCATATCATCTTTTATGCTTTTATTCTTTTTTTCTTT
Barbarea vulgaris (v1.0)
ID:
Contig1025_LTR-Copia_88Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
180Start:
12995End:
13174Strand:
->Contig1025_LTR-Copia_88
GGATCGATCGATCTGGTCGGGAACGATCGATCCTGGTGGGATCGATCGTTCGGTTAAGGTCACGGCAAGGTGGGATCGATCGATCCTGACCAGGATCGATCTATCTGGTGTGTTCGGCGAGGTCTCGGCGTGTGGGATCGATCGATCCTGGCCAGGATCGATCGATCTGGTCGTTCTGGC
Barbarea vulgaris (v1.0)
ID:
Contig1025_LTR-Copia_89Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
132Start:
33087End:
33218Strand:
+>Contig1025_LTR-Copia_89
GATCGATCGATCCAAGGTCGGATCGATCGATCCAATTCAAGCAAACTTGCGGTGAGAATCAAGATCGACCAGAGCACATCAGATCGATCGATCTAGAGTCAGATCGATCGATCCAAGACCAGATCGATCGAT
Barbarea vulgaris (v1.0)
ID:
Contig1029_LTR-Copia_90Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
108Start:
38114End:
38221Strand:
+>Contig1029_LTR-Copia_90
GAAATGGAGATTGATCGATCCTCCATTGACATCGATTGATCTCAGCAGAATTTTAATGAGATGGATGTTGATGAGGATCGACCGATCTCCTCTAGGATTGATCGGTCC
Barbarea vulgaris (v1.0)
ID:
Contig1029_LTR-Copia_91Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
126Start:
40247End:
40372Strand:
+>Contig1029_LTR-Copia_91
ATAGAGATCGATAGATATACACTATGGATTGATCGATCCCTGAAACAGAGAAGTCGAGAAAAGATAGCTGGATAGATCAATCTCTCATAAGGATTGATCGATCTACATACCTGCATTCGTTGGGTT
Barbarea vulgaris (v1.0)
ID:
Contig1029_LTR-Copia_92Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
281Start:
43849End:
44129Strand:
->Contig1029_LTR-Copia_92
AATCAGTGATGAACGTCACGGTAGAACGAACCCTTGGTTCTATAGAGGTACGGATCCAACCAACGATCATCGAGTTCACCGAGAGCCAAAGCTCGAGGTTAGGATCATGCGACAATGGTTTTGGAATGGTTCCATCGATGAAACCTATCTTCCGTTTAGCACGAAGAGCATTGGTCATCTCACCGGACCATTCACTGTAGTTCTCGCCGGTTAACATAACCGCCGTTATCAACGCACCGGGATTGTCGGATGCGAAGAGAGAGTACGGAGCTGGTTCAGGA
Barbarea vulgaris (v1.0)
ID:
Contig1030_LTR-Copia_93Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
95Start:
23249End:
23343Strand:
->Contig1030_LTR-Copia_93
AGATGGTGGTGATGCTGGTACTGAAAACAATGATGATGATGGTGTTCATGCCCATGGCGATGATGATGATGATAATGATACGTTGACAAGTAGGA
Barbarea vulgaris (v1.0)
ID:
Contig1030_LTR-Copia_94Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
111Start:
30445End:
30555Strand:
->Contig1030_LTR-Copia_94
TGAGATGATGAAGAAGAAGAAAAATGGGAGCACACAAACGATTTAACGAGTTCAGCCACCAATGAGGTTAAGCCTACATCTCGCCGGGAACTGTGTCCCGGAATCAACTAA
Barbarea vulgaris (v1.0)
ID:
Contig1031_LTR-Copia_95Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
82Start:
24920End:
25001Strand:
+>Contig1031_LTR-Copia_95
GGGTTTTTCTCGGGAAAGGTTTTAATGAGGCAACATCCAAAGCGCATTACGAGCTCTTAGAGTTGTGGCATCCAAGGGGGAG
Barbarea vulgaris (v1.0)
ID:
Contig1033_LTR-Copia_96Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1618Start:
2703End:
4320Strand:
+>Contig1033_LTR-Copia_96
CATTCTCAAGGGAGTAAACTACATGGTTTGGTCAAGAACCACCAAATCAGCTCTATATGGCAAAGGTCTATGGAGTCACATTGAAAAGGGAGTATCTTCAAAGGAGGCTGCCGAGATAGGGAATGACAAGAAGCCCGTCAATGAAGAAGAGCAAGAGAGATGGCTCCAAGAGGACCACAAGGTTCTCTACTATCTTCAAAACTCTCTGGAATCGTCCATCCTTGAAGCCTACTCATATTGTGAAACGGCTAAGGAATTGTGGGATACCTTACAAAAGGTTTATGGAGACACATCTAACCTTCACCGTGTCTTTGAAGTCAAGAAAGCTCTCAACGCCCTCACCCAAAATGGAGTAGAGTTCAAACATCATTTTGGGAAGTTTAGGTCACTATGGGCTGAGTTAGAAATGTTGAGACCAAGCACCATTGATCCTAAAGTGTTAAATGAACGGCGTGAACAAGACAAGGTCTTCGGATTACTCATGACGCTAGACCCATGCTTCAACAGCCTTATTAAGCATATTTTAAGGGCTGACAAGCTTCAAAGTCTAGATGAAGTCTGTTCACAAATACAAAAGGAAGAAGGCTCGGTTGGTCTCTTTGGTGGAAAAGGCGAACTTGCTATGGCAAATAAAGGAGAACTCGCAACCGCTAACAAAGGGAACTACAAGTATGACAACCACTACAAACGAGGACCTCCCTGTTCATGTGAGTATTGCAAGAGCAAAGGATTCAACCCAACACATGCAAAAGATAAGTGTTGGAGGCTCTACCCTCATCTTCGACCGGAACACCATGGAGGTGGAAGAGAGTCAAGAACTAATCAAACCAGAGAAGGAAGTGGAGCGGGCATGGCGGCATCTTCGGAGTTTGTCCGCAAAGCTGACCTAGATGCTCTCATCAAAGCCCTCAAAGAGAATAACGGTAACATTTATCAAAGTTTTAAATCTCTCATGGAATCAAAACCGATTATTATAGATTCGGGTGCCTCTCACCATATGATTAGTGATGCTAAACTCATAAGTAATATAGAACCTGCCCTAGGTAATGTGATCATAGCAAATGGAACTAAAATACCGGTAAAAGGAATTGGTAGCCTAAACATATTTGATCATAAATCTGATGTTTTTTACATGTCCACATTTACATCCAATTTACTATCCGTAAAAAAGATTACTAATGACCTTGATTGTTACGCAATTTTTGGACCTAATGATGTACATTTTCAGGATATTAAAACAAGCAAAATGCTTGGTCAAGGTGCTTCAAAAGACGGATTATATGTTCTTAAGGATACAAACCAATCCATCCCTTTATCTTTATATTTAAGTTCTGTTGTTGTGTGTGCTAATAACGCAATATGGCATGCTAGATTAGGACATCCTCATTCTCGTGCCTTAGGGTTATTATTACCTAGTCTTTCCTTTAAAAATGATAAATGTGAGGCTTATATACTCGGTAAACACTGTAGAACCGTGTTCCCCAAGTCTCTTACTATCTATGAGCAATGTTTTGATTTAATCCATTCGGATGTGTAGACTTCTCCATGTGAATCAAGAGAGCATCATAAGTATTTTGTTACATTCATTGATGAGAAATCTAAATATACTTTTAATTTT
Barbarea vulgaris (v1.0)
ID:
Contig1033_LTR-Copia_97Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1044Start:
4630End:
5673Strand:
->Contig1033_LTR-Copia_97
CTCCCTTATTGTTAGTCTTGTAAGCGTCTATAGTGGAGTTTTGGCTGGGTTTTGGCTCCTATTTTCCCTGCCTTTTCTCAACAGATCAAGTGCATATTTTTCCTTTGAGGATAAAAATAGCCTTTTTTTGATCGACTTACTTCTATTCCAAGAAGTATTATAGTTCTCCAGATCTTTTAATTCAAAATGGATTTAAAGATATGATTTGGGTTTCTTGTATGCCTCCTTGTCATTCCGGAGATGATAAGATTCACTCTAACATATTACGAGAATGACTATAATACCTTCGTTGGCTTTTTGGATGGTGAAGAGGGTATGATCAGCTTCTGATTTCTGAATCCTCTATCCAACAGATTAGCTAAGTGTGATACGCCCCTGGAAGATGTTTTTAAACCATTAGATCGCCTTTTGAGTCTTAATTTTCCTTGGTTTCATCATGACTTCTAGGCCAGGGGGAGGTGGTTTCATATAACTTCATCTTCAACTTCTCCTTGGAGGAATGCATTCCTTAACTCCATCGTGCCAAAGATACCCAATTCCAAGTTAGTAGGCTAAAGATAGTCAACTCTTATTGTATTGGAGTTTTGCAACCGGTGCAAATGTGTCCATGTATTCTTTTCTCCATGATGTTTGTGTAGATCCTCTCGCCACCAGTCTTGCTTGTACGCGTTCAATCTCCCCTCACTTTTTGTACTTTATTGCGTGATAACACGAGACCTTACCGCTTTCTTCACCTTTAGGTAATCGGCTTCATCCCATGGTATTATTTATTTCCATGGCATTGTTTCTTCTTCCTTATTGCGACGTTTCTCCAACTTCATGTCTTTTGCTTCATCATAGGTCTCTGTATCCAGTTCTTGGTCTATTTGGAGTGTGAAGGAAAGCCTTGATGTTTTAAAGGTAAATACGCGAGTGCAACCTGGCTTGAATAGGTGGAGCAACGGCCTTGTTTGTTGGTTTCAAACCGTTTTGTTTTCCATGTATCCGGGGACGAACTTTGAGCCTTTCACTTCTTCTTAGGGAAGGTGGTTGCTGGTGGTGTAG
Barbarea vulgaris (v1.0)
ID:
Contig1033_LTR-Copia_98Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
680Start:
5904End:
6583Strand:
->Contig1033_LTR-Copia_98
CAGGTCTTTCTAGGATACTTCTAAGGTTACTTGCACGATCGGATGTGAGAATGAGCTAAGCTTTCAATATCCTTCCAATTCTTTTCCATGTAGTACTCATTGTCCTCAAGAAACTTCACATCTTGTGAGACACACACTCTTCTTGCCTCCGCATGTAGCATTTTGTACCTTTTTGTGTTGTTGAAGTATCAGATGAACATTCCTTTGGTCACTCTTAGCTTCAAGCTTATCTCGCCTTTCTCCTGGTATCAATACATAACCACACATCCAAAACAACGTAAGTGATTAATGAATGGTTTAGTTTTGTTCAATACCTCGAATGGTGAAGACATCTCCAAGGTTTTAGTTGGGGTTCGATTGATCAAGTAGCATGCGGTCGTCAGCATCACTCCAAAAATGTTTAGGTACATTGTATGAAACATTATGATCTTGCCACCTCCATCAAATGCCTATTTTTCCTTTCAGCCACTCCATTTTGTTGTTGGGTGTATATGGCAGCTTGTTTGATGTATGATTCCATATTTATTGAGGTGTTGTCGAAAAGCAATTGCTTGTGTACTCGCCACCATTATCTGATCTTAAATCTTAATCTTGCCATTATAGTGATTAGTAAACATAGTTTTGAAAGTTTATAAACGCCTCAAGCAACTCTATCCTTAGATGGAAGCAATGTTAACCAA
Barbarea vulgaris (v1.0)
ID:
Contig1033_LTR-Copia_99Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
200Start:
42983End:
43182Strand:
->Contig1033_LTR-Copia_99
TTATCTTTTTTTCTGTCTTCTCTTTTAATTCAAAAGTGTAGTGAATATGAGGTCACGGGAATTTTCCTAACCCCTCACTACCACCTCTGCGTGATCATCTCATCTCAAGTAAAATAATGAGGTCACGGGAATTTTCCTACCCATTTACTCAAGATGAGAATCATATCATCTTTTGGCTATTTATTATTTATTTTTTCTTT
Barbarea vulgaris (v1.0)
ID:
Contig1033_LTR-Copia_100Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
214Start:
45757End:
45970Strand:
->Contig1033_LTR-Copia_100
CTTTCTTCTTTTCTTTTTTTTTCTTTTTAAAATTCAAAGGTGTAGTGAATAATGAGGTCACGAAAAATTTTCCTACCCCTCACTGCCACCTCTGCGAGATCATCTCAATATTAAGGAAAATAATGATGTCACGGGAAATTTTCTTACCCTTTTACTCAAGACGAGAATCATATCATCTTTTCTGCTCTTTATTTTTTTCTTTTCTTTTTTGTTT