TBGR-Browse-Bvu-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
Contig4013_LINE_61	Retrotransposons	LINE	LINE	186	20529	20714	-
Contig41_LINE_62	Retrotransposons	LINE	LINE	107	222653	222759	-
Contig412_LINE_63	Retrotransposons	LINE	LINE	104	15872	15975	+
Contig417_LINE_64	Retrotransposons	LINE	LINE	150	30274	30423	+
Contig418_LINE_65	Retrotransposons	LINE	LINE	385	8893	9277	-
Contig42_LINE_66	Retrotransposons	LINE	LINE	172	185668	185839	+
Contig450_LINE_67	Retrotransposons	LINE	LINE	100	72631	72730	+
Contig468_LINE_68	Retrotransposons	LINE	LINE	302	65213	65514	-
Contig5075_LINE_69	Retrotransposons	LINE	LINE	100	2142	2241	+
Contig5237_LINE_70	Retrotransposons	LINE	LINE	105	1553	1657	-
Contig58_LINE_71	Retrotransposons	LINE	LINE	82	43266	43347	+
Contig58_LINE_72	Retrotransposons	LINE	LINE	177	47282	47458	+
Contig589_LINE_73	Retrotransposons	LINE	LINE	148	60950	61097	-
Contig5949_LINE_74	Retrotransposons	LINE	LINE	109	1215	1323	+
Contig6085_LINE_75	Retrotransposons	LINE	LINE	106	1142	1247	-
Contig671_LINE_76	Retrotransposons	LINE	LINE	360	33455	33814	-
Contig6716_LINE_77	Retrotransposons	LINE	LINE	112	2042	2153	+
Contig6870_LINE_78	Retrotransposons	LINE	LINE	105	4083	4187	-
Contig6877_LINE_79	Retrotransposons	LINE	LINE	100	3610	3709	+
Contig7013_LINE_80	Retrotransposons	LINE	LINE	139	10520	10658	+

Barbarea vulgaris (v1.0)

ID:

Contig4013_LINE_61

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

186

Start:

20529

End:

20714

Strand:

-

>Contig4013_LINE_61

GAAACACTGATTCCGAATCAAAAAACTCGGACAATCGCGTCATTGCCTCAGCTCCAAAGAAGCTCGAATCCTCATCCTCGTTGCCACGAGTAACCCCCACACAAGGCCCACCTTCAAAAACCTCAAAAGAAGGAGCACCTACAGCTTCTCCAAAGACTAACGCGAAAACATAACCGCTACCGTGAA

Barbarea vulgaris (v1.0)

ID:

Contig41_LINE_62

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

222653

End:

222759

Strand:

-

>Contig41_LINE_62

TTTTCTTGTTTTTGGTAAATAGAACTGTTAAATTAGATACCAATTTCAAGTTTTGACAGAATTTACAGAGATAAACAGAGAATTTGAAAGACCAAAAACTACAGAAA

Barbarea vulgaris (v1.0)

ID:

Contig412_LINE_63

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

15872

End:

15975

Strand:

+

>Contig412_LINE_63

TTCTGTAGTTTTTTGGTTTTTCCGTCTTCTTGTCCTCTCTGTAATTTCTGTCAAAAATTTTGAAGTCGGTATTGAATCTTAACATTTTTACCAAAAAAAAGAGA

Barbarea vulgaris (v1.0)

ID:

Contig417_LINE_64

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

150

Start:

30274

End:

30423

Strand:

+

>Contig417_LINE_64

TGCCTTAGTTGGGAGTTGAGGCGCTCTTCTTCTGGGGTTCGAGGACCGGCCTCAGATGGGGTTGCTCGTGGCAACGAAGATGAGGACTCGAGTTCTTTGGAGCTGCGGCAATCACGCAAATTTCTGAGTTCTTCTCGGAATCGGTGTTTC

Barbarea vulgaris (v1.0)

ID:

Contig418_LINE_65

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

385

Start:

8893

End:

9277

Strand:

-

>Contig418_LINE_65

TTTTTTTTCTTTTGGTAATATGTGAAGTATTTATGCCATTTTCGAAGTTGCGATAGCAGTTACATAGGAAACAAAGAAGACAGAAAAACAAAAAATCTACGACAAAAGAAACGAAAACGACAATACAAGAAACAAACAAAATGCAGTAAGAACGGTAAATGCACAAAGCAAGACGAAGGAACCGCGATGAAGAAACACCGATTCCGAGCGTCGAAACTCGGACATTCGCGTAATTGCCGCAGCTCCAAAGAAACTCAAGTCTTCATCGTCGTTGCCACGAGCTACCCCTATCCAAGGCCAAGCCTCAAAACCTCAGACAAAGTGGCGCCTACAGTTTCTCCGAGAACTAACGCAAAAACGGAATCACTACCAAGGATTTCTTCAC

Barbarea vulgaris (v1.0)

ID:

Contig42_LINE_66

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

172

Start:

185668

End:

185839

Strand:

+

>Contig42_LINE_66

CGTTTTCGCGTTAGTCTTCAAAGAAGCTGTAGGTGTGCTAGTAATTTGAGGTTTTGAGGAGGACTTCGGGTCGGGTATGCTCGTGGCAACAAGGATGAGGTCTCTGGTTCTTTGGAGTCGTGGCAATCACGCGGATGTCCGAGTGTCACTGTTTGGAATCAGTTTTTCTTTT

Barbarea vulgaris (v1.0)

ID:

Contig450_LINE_67

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

100

Start:

72631

End:

72730

Strand:

+

>Contig450_LINE_67

TTTACGTTTGTTCTCAGAGAAGCTGTAGGCACTACCTAATCTAAGGATTTGAAGACTGGCCTCGGATCACAGTTGCTCGTGGCAACTACGATGAGAACTC

Barbarea vulgaris (v1.0)

ID:

Contig468_LINE_68

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

302

Start:

65213

End:

65514

Strand:

-

>Contig468_LINE_68

TCTTCTTTTTTTTTGTAAAAATGTTAAGTATTTATACCAATTTTTAAATTGTGACAGCGGTTACAGAGGATACTACGAATACAAAAAGACCAAAAATCTAAAGCAAAGGCTAAGAATACAACAAGAACAAATAACGGACAAAGAACAACAAATAAAAGCTCACGCGAGAAACTGACAAAAGAAACCAAATGAAGAAACACCGATTCCGAGAAAGAACTCGGAAATTTGCGTGATTGCCGCAGCTCCAAAGAACTCGAGTCCTCATCTTCGTTGCCACGAGCAACCCCATCTGAGGCCGGTCC

Barbarea vulgaris (v1.0)

ID:

Contig5075_LINE_69

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

100

Start:

2142

End:

2241

Strand:

+

>Contig5075_LINE_69

TTTTTGAGAATTATTTTTTTTATTTTTCCGTGTTCTAGTTGTCTCTATAACTTCTGTCAAAAAATTTAAAATGATAAGCAATCTTGAATTTTTACCAAAA

Barbarea vulgaris (v1.0)

ID:

Contig5237_LINE_70

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

105

Start:

1553

End:

1657

Strand:

-

>Contig5237_LINE_70

TTCTTTTTTTTTTGGTAAAAATGTTAAGATTCAATACCGATTTTGAAATTTTTGACAGAAATTACAGAGAGGACAAGAAGACGGAAATACCGAAAAACTACAGAA

Barbarea vulgaris (v1.0)

ID:

Contig58_LINE_71

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

43266

End:

43347

Strand:

+

>Contig58_LINE_71

TCCGCTTTCTAGTTTTCTCTGTAATTTCTTTCAAATATTTTTACAAAATTGTATGCGATCTTAATTTTATCAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig58_LINE_72

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

177

Start:

47282

End:

47458

Strand:

+

>Contig58_LINE_72

TTCCGTTTTTGCGTGTGTCCTCGGAGAAGCTGTATGTGCCCTCTTATCTGAGGTTTTCGACGGCTGGCATCTGGGAGAGTTTCTTATGGCAACAACAATGAGGACTCTAGTTCTTAAAGATTGTGGCATCAACGCATATGTCCAAGCTTTAATGCTCGGAATCAGTGTTTTTTCGTA

Barbarea vulgaris (v1.0)

ID:

Contig589_LINE_73

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

148

Start:

60950

End:

61097

Strand:

-

>Contig589_LINE_73

AAACACCGATTCCGAGTCAAGAAACTCGGACAATCGCGTGATTGCCTCAACTCCAAAGAAACTCGAGTCCTCATCTTTGTTGCCACGAGTAACCCCACACAAGACCCGCCTTCAAAAACCTCAAAAGTAGGAGCACCTACAGCTTCTC

Barbarea vulgaris (v1.0)

ID:

Contig5949_LINE_74

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

1215

End:

1323

Strand:

+

>Contig5949_LINE_74

GTTGTTTCTGTAGCTTTTTGGTCTTTCAATCTTCTTGTTATCTCTGTAAATTCTGTCAAAAACTTGAAATTGGTATCTAATCTTAACATTTTTACCAAAAAAGAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig6085_LINE_75

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

1142

End:

1247

Strand:

-

>Contig6085_LINE_75

TTTTTTTTTTTGGATAAAAATTTTAAATTCAATACCATTTTAGAAGATTTTGATAAAAGTTACAGGAAAAACAAGAAGACGAAAATACTGAAAATCTACAGAACAA

Barbarea vulgaris (v1.0)

ID:

Contig671_LINE_76

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

360

Start:

33455

End:

33814

Strand:

-

>Contig671_LINE_76

TTTTTTTTTTTTTGGTAAAATGTTAAATTTTATACCATTTTAAAATTTTTGACAGAAATTACAGAGATAACAAGGAGACGGAAAGACCAAAAACTACAGAAACAACAAACAAACAACAGAAACACAGAGACGGACCAAAGGATACAACAAAATAAGCGCACGCCTAAGCAAACACAGCAAAGCTCGACAAAGAAACACCGATTCCAAGCAATGAAGCCCGGATATTCGCGTCGATGCCACAATCCCTAAGAATTGGAGTCTTCATCGTCGTTGCCACGAGCAACCCCTCCCGAGGCCAGCCTCAAAACCTCAGACTATGGAGCACCTACAGCTTCTCCGAAGACACACGCAAAAACGGAA

Barbarea vulgaris (v1.0)

ID:

Contig6716_LINE_77

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

112

Start:

2042

End:

2153

Strand:

+

>Contig6716_LINE_77

TGTTTTTGTTTCCGTAGATTTTTGGTCTTTCTGTTTTTCTATGTTTCTCTGTAACCGCTATCACAAACTTTAAAATGATATAATTTAATATTTTATCAAAAAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig6870_LINE_78

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

105

Start:

4083

End:

4187

Strand:

-

>Contig6870_LINE_78

TTTTTTTTTATAAAATGTTAAATTATATCATTTTAAAGTTTGTGGCATCGGTTACAGAAAAACATAAAAAAAAAGAAAGACCAAAAATCTACAGAAACAAAAACA

Barbarea vulgaris (v1.0)

ID:

Contig6877_LINE_79

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

100

Start:

3610

End:

3709

Strand:

+

>Contig6877_LINE_79

TTTCTGTAGTTTTTCGGTTTTTTTGTCTTCTTGTTGTCTCTGTAATTTCTGTCAAGAACGTTAAAATGGTATCTAACCTTAACATTTTTACAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig7013_LINE_80

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

139

Start:

10520

End:

10658

Strand:

+

>Contig7013_LINE_80

AGAAGCTGGACACCACTGCTTAGAGGTTTAAGGATTGACTTCTAGTGAAGGTTCCTCGTGGCAACGACGATTGGGATATGGGTTCTTTGGAACTACGGAACCAAAATATCCTAGTTGTTTCGGCTTGGAATCAATGTTT