ID Class Order Superfamily Length Start End Strand View
scaffold3|size6152117_LINE-Penelope_21 RetrotransposonsLINELINE-Penelope8245970904597171-
scaffold3|size6152117_LINE-Penelope_22 RetrotransposonsLINELINE-Penelope9352243965224488-
scaffold41|size1192512_LINE-Penelope_23 RetrotransposonsLINELINE-Penelope137254400254536-
scaffold42|size1480117_LINE-Penelope_24 RetrotransposonsLINELINE-Penelope183298644298826-
scaffold42|size1480117_LINE-Penelope_25 RetrotransposonsLINELINE-Penelope179304330304508+
scaffold45|size1112655_LINE-Penelope_26 RetrotransposonsLINELINE-Penelope144587747587890+
scaffold4|size9045706_LINE-Penelope_27 RetrotransposonsLINELINE-Penelope250438357438606+
scaffold4|size9045706_LINE-Penelope_28 RetrotransposonsLINELINE-Penelope12543727504372874-
scaffold54|size764999_LINE-Penelope_29 RetrotransposonsLINELINE-Penelope99662963663061+
scaffold5|size8047781_LINE-Penelope_30 RetrotransposonsLINELINE-Penelope12425150382515161-
scaffold5|size8047781_LINE-Penelope_31 RetrotransposonsLINELINE-Penelope11942972334297351-
scaffold5|size8047781_LINE-Penelope_32 RetrotransposonsLINELINE-Penelope10363001116300213+
scaffold5|size8047781_LINE-Penelope_33 RetrotransposonsLINELINE-Penelope12374569667457088-
scaffold64|size621602_LINE-Penelope_34 RetrotransposonsLINELINE-Penelope104181911182014-
scaffold6|size5173884_LINE-Penelope_35 RetrotransposonsLINELINE-Penelope181684752684932-
scaffold7681|size529_LINE-Penelope_36 RetrotransposonsLINELINE-Penelope9983181-
scaffold7681|size529_LINE-Penelope_37 RetrotransposonsLINELINE-Penelope85311395-
scaffold7|size4355475_LINE-Penelope_38 RetrotransposonsLINELINE-Penelope8517808181780902-
scaffold8|size4582595_LINE-Penelope_39 RetrotransposonsLINELINE-Penelope157152579152735-
scaffold8|size4582595_LINE-Penelope_40 RetrotransposonsLINELINE-Penelope23034126883412917+

< 1 2 3 > Total 3


Boechera retrofracta (v1.0)

ID:

scaffold3|size6152117_LINE-Penelope_21

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

82

Start:

4597090  

End:

4597171

Strand:

-

>scaffold3|size6152117_LINE-Penelope_21

ATACATCTGCATTTACATATTTATACATATATATATATATATATGCCTGCTCATGAAGCCAATCGATGTATGCACATATATG

Boechera retrofracta (v1.0)

ID:

scaffold3|size6152117_LINE-Penelope_22

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

93

Start:

5224396  

End:

5224488

Strand:

-

>scaffold3|size6152117_LINE-Penelope_22

TGTATATATGCATATCACATACTCACATACGTACATGAACATAGACATATATATATCTACATATACGTATATATATATATATATACACGTACA

Boechera retrofracta (v1.0)

ID:

scaffold41|size1192512_LINE-Penelope_23

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

137

Start:

254400  

End:

254536

Strand:

-

>scaffold41|size1192512_LINE-Penelope_23

ACATACACACACATAACATACATACCGATGTATATACATACATACATACATATATATCTATACATATACATACATGCATGCATATATCTATCCACCCATACATACATACATACACATCCATACATACATACATGCAT

Boechera retrofracta (v1.0)

ID:

scaffold42|size1480117_LINE-Penelope_24

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

183

Start:

298644  

End:

298826

Strand:

-

>scaffold42|size1480117_LINE-Penelope_24

ATGTATGTACTACGTACACATGCATGCAGACATACATACCCTACCTACATAGATGCATACATATATTACATACACGTGCATACCTCTATAAATGCATACATACATTCATGCATAAGCGTATACATACATTATATTCATGCATAAGCATTCATGCATGTGCGTATACACATTCATGTATATATA

Boechera retrofracta (v1.0)

ID:

scaffold42|size1480117_LINE-Penelope_25

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

179

Start:

304330  

End:

304508

Strand:

+

>scaffold42|size1480117_LINE-Penelope_25

CAAGTATGTGTGTATGTATCTATGTAAATGTAAAGATGTATATGTGCATGTATCTATGTAAATGTGAAGATGTATCTATGCATGCATGTATGTATGCATAGTATGTATGCAGATGTATGTATGTACGCATGCATGTAATATATGCATGTATGCAGATGTATGCATGCAGATGTATGCAT

Boechera retrofracta (v1.0)

ID:

scaffold45|size1112655_LINE-Penelope_26

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

144

Start:

587747  

End:

587890

Strand:

+

>scaffold45|size1112655_LINE-Penelope_26

ATATATATATATATATATTTCATTATACATTTTCTGGTGAAAATATATATTATAATATACTATAATATACATATGTGTAATAATTAAATGAAATATATATACATATATATATATATATTTTTTTTTTCTTTCAATTTTTTACCA

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_LINE-Penelope_27

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

250

Start:

438357  

End:

438606

Strand:

+

>scaffold4|size9045706_LINE-Penelope_27

TATACATGTTTTATATACGCATATATATATATGTATGTATGTGTGTAATGTATATTATGTATGTATGCATGTACGCATGAATGATATGCATGTATGCATGAATGATATGCATGAATGTATATATGCATTAATGTATGTATGCATGTATGCATGAATGATATGCATTAATGTATGTATGCATGTATGCATGAATGATATGCATTAATGTATGTATATGTATGAAGGAATGCATGTATGTATGTGTATGCAT

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_LINE-Penelope_28

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

125

Start:

4372750  

End:

4372874

Strand:

-

>scaffold4|size9045706_LINE-Penelope_28

TGTGCATACATACATGCATACATCATACTATGTGCGTATATACATTCATTTGTGCATACATACATGCATACATAATACATTCATATGTGCATACATACATTCATTTGTACACGTACATACATGCA

Boechera retrofracta (v1.0)

ID:

scaffold54|size764999_LINE-Penelope_29

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

99

Start:

662963  

End:

663061

Strand:

+

>scaffold54|size764999_LINE-Penelope_29

ATTTATATATATATATATATATATATAGCTTGTGTGTTTGTGTGTATATTAGATAGATATATGTAAAGATTTGCTATCTATCTCTCTTTCTCCCACTCT

Boechera retrofracta (v1.0)

ID:

scaffold5|size8047781_LINE-Penelope_30

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

124

Start:

2515038  

End:

2515161

Strand:

-

>scaffold5|size8047781_LINE-Penelope_30

ATATTTATAAATACACATACATATATATATATATATATATATGTATATACACGCACGCATGCTTAATCCATATAGCATAGTACTATCTGAATATGCGTACGTATATCATTGTCATATCTACGTA

Boechera retrofracta (v1.0)

ID:

scaffold5|size8047781_LINE-Penelope_31

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

119

Start:

4297233  

End:

4297351

Strand:

-

>scaffold5|size8047781_LINE-Penelope_31

ATGCACACGTCTATACACAATTACACATGCATACATGTATAGATCATGATGTTATACACCATTACAATCAAACATATATATATGCGACATATATATATGCGACATATATACATCTACAT

Boechera retrofracta (v1.0)

ID:

scaffold5|size8047781_LINE-Penelope_32

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

103

Start:

6300111  

End:

6300213

Strand:

+

>scaffold5|size8047781_LINE-Penelope_32

ATATGATATCTTGTATACATGCATGGATCATTTGTATACAAATATGTATATCTAAAAATATGCAGTGTGTGTATGCATATATATACACAGATATATAGATACA

Boechera retrofracta (v1.0)

ID:

scaffold5|size8047781_LINE-Penelope_33

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

123

Start:

7456966  

End:

7457088

Strand:

-

>scaffold5|size8047781_LINE-Penelope_33

ATATATACATGTTTTCTTGTACATGATATATAACAAACATATTTATATTTACACGTATATATATATATACACATTATGCATATATATATATATGTTCATACGCATATATAATCTCATTTATAC

Boechera retrofracta (v1.0)

ID:

scaffold64|size621602_LINE-Penelope_34

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

104

Start:

181911  

End:

182014

Strand:

-

>scaffold64|size621602_LINE-Penelope_34

ATATGCATGCATACATACACACATATATATATATATATACATGAATGCATTTCAATACACACATGCATAACATACATATATATGTATATCCACATGCATGCATA

Boechera retrofracta (v1.0)

ID:

scaffold6|size5173884_LINE-Penelope_35

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

181

Start:

684752  

End:

684932

Strand:

-

>scaffold6|size5173884_LINE-Penelope_35

ACATATACATACATGCCTTCATACACATACATATATTAATGCATATCATTCATACATGCATTCCTTCATACACATACATATCATTCATGCATACATAAATGCATTCATAAATACATAAAAACATACATAATATACATTGCACACATACATACATATATATGCGTATGTAAAACATGTATAC

Boechera retrofracta (v1.0)

ID:

scaffold7681|size529_LINE-Penelope_36

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

99

Start:

83  

End:

181

Strand:

-

>scaffold7681|size529_LINE-Penelope_36

AAGATCTATATATATCTATATCTATAGTATTTTACTATTTTTTCATCGTCATATATAGTATATTATATATGCTTGTACATATATATACCTATATGTATA

Boechera retrofracta (v1.0)

ID:

scaffold7681|size529_LINE-Penelope_37

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

85

Start:

311  

End:

395

Strand:

-

>scaffold7681|size529_LINE-Penelope_37

ATAGAGATCTACATATTATATATATATATATATATCCACATATATCATAACACATATATACATCCATATAAAAATTTACATACAA

Boechera retrofracta (v1.0)

ID:

scaffold7|size4355475_LINE-Penelope_38

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

85

Start:

1780818  

End:

1780902

Strand:

-

>scaffold7|size4355475_LINE-Penelope_38

TATATATATATATATATATTTTTATATATTTTGTACATAAGTATATATACATTAATACATATATTACAATCAAATACACATATAT

Boechera retrofracta (v1.0)

ID:

scaffold8|size4582595_LINE-Penelope_39

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

157

Start:

152579  

End:

152735

Strand:

-

>scaffold8|size4582595_LINE-Penelope_39

TATTATTATTATTATTTACATTATTAAATTTTCTTTAAATTTACACATATATACACATATATTTCCTTATAAATATATTTATATATAAGTTATGTGTATATATATAAATAAATATAGGCATATCTATATATAAGTGCTTTACCTATATATATATATA

Boechera retrofracta (v1.0)

ID:

scaffold8|size4582595_LINE-Penelope_40

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

230

Start:

3412688  

End:

3412917

Strand:

+

>scaffold8|size4582595_LINE-Penelope_40

GCATATATGCTTGAATGTGTGTGCATGTATGCATATGCATAAATGTCTATGAATGAATGCTTATGCATGAATATATGTATGTATGTATGTATGCATGCATGCATGTATGTATACATGTGTATGTAATGTATGCATGTATGTATACATGTGTATGTAATGTATGCATGTATCTATGTAGGTAGGTATGTACGTGTGTATGCATGTGTACGTAGTATATATATGCAATGTGT