ID Class Order Superfamily Length Start End Strand View
A09_LTR-Ngaro_21 RetrotransposonsLTRLTR-Ngaro2283004948530049712-
A09_LTR-Ngaro_22 RetrotransposonsLTRLTR-Ngaro833825647138256553-
A09_LTR-Ngaro_23 RetrotransposonsLTRLTR-Ngaro834355381443553896-
A09_LTR-Ngaro_24 RetrotransposonsLTRLTR-Ngaro1114439569944395809+
A10_LTR-Ngaro_25 RetrotransposonsLTRLTR-Ngaro4001456089514561294+
A10_LTR-Ngaro_26 RetrotransposonsLTRLTR-Ngaro1141579878615798899+
Scaffold0142_LTR-Ngaro_27 RetrotransposonsLTRLTR-Ngaro1243161931742-

< 1 2 > Total 2


Brassica rapa (Chiifu_V3.0)

ID:

A09_LTR-Ngaro_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

228

Start:

30049485  

End:

30049712

Strand:

-

>A09_LTR-Ngaro_21

CTGCTGCTGCTGCTGGTGATGATGATGAAGCTGTGACAGCTGTTGCTGCTGATGATGTTGGAGCTGTGACATTTGATGCTGCTGCTGCTGCTGGAGTTGTGGCAGCTGTTGCTGTTGATGATGGTGTTGCTGCTGGATCTGTTGTTGTTGTTGCTGCTGGATTTGCTGCTGCTGCTGTTGCTGCTGGATCTGTTGTTGTTGTTGGAGTTGCTGCTGTTGCTGATTTTG

Brassica rapa (Chiifu_V3.0)

ID:

A09_LTR-Ngaro_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

38256471  

End:

38256553

Strand:

-

>A09_LTR-Ngaro_22

AGTATTATATGTATATATATTCTCTATGCCCTGAATATATATATATATATATATAAATCATTTAAAAAGTCATGCAAGTGTGA

Brassica rapa (Chiifu_V3.0)

ID:

A09_LTR-Ngaro_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

43553814  

End:

43553896

Strand:

-

>A09_LTR-Ngaro_23

ACACACACACACAGAACCTATAGATACACACACACACACACAGACATTTAAACATGCATGTATATATCAATGGATGCATAGTT

Brassica rapa (Chiifu_V3.0)

ID:

A09_LTR-Ngaro_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

44395699  

End:

44395809

Strand:

+

>A09_LTR-Ngaro_24

AATAGATATTACAATAATCATTCCAACAGCAACAACAACAGAAACAGCAGCAGCAACAACAACAATAACAACAACTACAACAACAACATATTAATGGTTTTCATCAAGAAC

Brassica rapa (Chiifu_V3.0)

ID:

A10_LTR-Ngaro_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

400

Start:

14560895  

End:

14561294

Strand:

+

>A10_LTR-Ngaro_25

CAACAACAGCAGCTGCAGCAGTTGTTGCACTCCTCTTTGAACCATCAGCAATCACAGCCTCAGCAACAACCACAATCGCATCAGCAGCAGCAACAGCAACCACAATCACTGCATCAGCAGCAACAACAACAATCACTGCTGCTGCAGCAGCAGCAACAACAACAACAATCTCTGCAGCAACACCATCAACAACAGCTTCAGCAACACCATCAACAACCGCTACAGCAACAGACTCAGCAGCAGCAGCTACAACAACAGCAGCAGCAGTTAAGAGCGCAGCAACTGCAATCTCATACGCACCCACAGCCACAACAATCTCCTCCGCACCCACAGCCACAGTCACATCCACAACAGCTACAGCCACATAAGCTGCAGCAATTTCAGCTTCCGCAGAATCAGC

Brassica rapa (Chiifu_V3.0)

ID:

A10_LTR-Ngaro_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

114

Start:

15798786  

End:

15798899

Strand:

+

>A10_LTR-Ngaro_26

CAGCAGCAGCAGCAACAGCAACAACAACAGCAGCTTCTCTATCAACACCAATTACAACAGAGACAGCAGCAGATGCTTTTATTACAGCAGTTGCAGAAACAGCAACAACAACAA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0142_LTR-Ngaro_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

124

Start:

31619  

End:

31742

Strand:

-

>Scaffold0142_LTR-Ngaro_27

TTTTTTTTTTTTTAAGGGTTTCTACAACGGACGTCTTGTGTGTGCTGATGGACACACACAGACGTTTTGTGTGTGCTGACGGACACACACGGACACACACAGACACACACAAACATCCACAGAC