ID Class Order Superfamily Length Start End Strand View
A01_LINE-L1_81 RetrotransposonsLINELINE-L12771149605711496333-
A01_LINE-L1_82 RetrotransposonsLINELINE-L12031156014911560351-
A01_LINE-L1_83 RetrotransposonsLINELINE-L14401200442012004859-
A01_LINE-L1_84 RetrotransposonsLINELINE-L115401200514212006681-
A01_LINE-L1_85 RetrotransposonsLINELINE-L17621200722712007988-
A01_LINE-L1_86 RetrotransposonsLINELINE-L14631212355912124021-
A01_LINE-L1_87 RetrotransposonsLINELINE-L15491213675812137306+
A01_LINE-L1_88 RetrotransposonsLINELINE-L117601213760012139359+
A01_LINE-L1_89 RetrotransposonsLINELINE-L122071222403612226242-
A01_LINE-L1_90 RetrotransposonsLINELINE-L17581222681912227576-
A01_LINE-L1_91 RetrotransposonsLINELINE-L16131229008512290697+
A01_LINE-L1_92 RetrotransposonsLINELINE-L14611231829312318753+
A01_LINE-L1_93 RetrotransposonsLINELINE-L16381231883212319469+
A01_LINE-L1_94 RetrotransposonsLINELINE-L124891235291312355401-
A01_LINE-L1_95 RetrotransposonsLINELINE-L14041235589212356295-
A01_LINE-L1_96 RetrotransposonsLINELINE-L12711241188512412155-
A01_LINE-L1_97 RetrotransposonsLINELINE-L12201241480012415019-
A01_LINE-L1_98 RetrotransposonsLINELINE-L140681275281612756883+
A01_LINE-L1_99 RetrotransposonsLINELINE-L17031281766012818362+
A01_LINE-L1_100 RetrotransposonsLINELINE-L13801281855312818932+

< 5 6 7 8 9 > Total 663


Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

277

Start:

11496057  

End:

11496333

Strand:

-

>A01_LINE-L1_81

CTTCAGAACAAATAATCCAAATTTGAATATACATTGATTATTCAAAAAATGTTTGGGCTTGATAGAATTTAAAAGAGAGCTCATAGTTATAGGACATATATACATTCAAAAATTACATGATTGATAGATTCATCAAGTCTTTCACATCTAGAACAATGATTGTCACATCGCATATAACAATATGTTTAGATTCTTTGTAACCGCTAAATATCATGCGACCATTTACCGTAGTAGATGTTGAATCTTTCTGGGACATTGATTCTCCATATAAAGGCTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

203

Start:

11560149  

End:

11560351

Strand:

-

>A01_LINE-L1_82

TTTTTTTTTGACAACAAATATTTACAGACTCATGTTGACTTTGTTAACTAAATCGGTAACTCCCCATCCATGTGAACAACGAAAGACGGTTGTTTTCTAATATTGTGTGCTAAGCTATCTGCTCATAGGTTCTTCGTCCGAGGTACATGAGCGATGTCTTAGTTGAGGAAGCTTCTTTTTAAAAGCTTAATATCTTCCAGATA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

440

Start:

12004420  

End:

12004859

Strand:

-

>A01_LINE-L1_83

AGCCTCAAACCATGCCTGGCATTCACTCTCAGCATGTCTAACCAGTTCCAGAGGATCTCTATCTATTCCTCTGAAGAGTTTTTCATTTCTAGCCTTCCAAATGAACCATATTATCCAGAGATAAGGATCCCTATCTTGCTCTGGCTCCATGATACTATTTTTCCTCCAGAACAGATAATCCATGTTTGTGTAGACGCTCGATACCGGAAAAATATTTGGGCTCGTCGGAGTTGAAGATAAAGACCATACTTGACGGGCTGGTGGGCATTCGAAAATTGCATGTGTGACAGTCTCCTCTGCTTCTCCACATCTTGGGCAATAGTTGTCACACCTCATATTACGTCTAACTAAATTCCTTGTTACTGCCACATGACCAGTCAACAACTGCCATATAAGATGACATATCTTCGTAGGGGCCTTCAATTTCCACGCAAAGGCCT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1540

Start:

12005142  

End:

12006681

Strand:

-

>A01_LINE-L1_84

AGCTGGCCTGGCGGGATTCGATGGAATCCATGGATCCTCCCATACTTTAACCTCATAGCCTGAGTGTATCTTCTGTCTAATCCCCAGTAGCAGTAATTTTCTTGCAGCAGAGATGCTAGTCCACACATAGGATGGGCTACTAGTAGGGTTTACTCTCAATGGAGAGCTCAATCTATAGTACCTTCCCCGTAAGACTCGGGCCACCAGAGAATCAGGAAACTGTACTAATCTCCATAGTTGTTTAGCTAGAAGCGCCAGATTAAACTCATGAATCAATCGGAAGCCAATTCCACCCTCTTCTCTGGATAGGCAGACTTTCTCCCATTTCGCCCAGTGTATTCCTCTCTTTGGTGGATTCGAGCTCCACCAGAACTGAGCAATAGCACTTGCCAAGCTTTCACATGTCTCCAATGGGAGCAGGAAAGTTGACATGACGTATGTCGGAAGAGCGAGCAGAATTGATTTAATCAGTACTTCCTTTCCACCTTTCGAGAGCCATCTACCCGTCCATCCATTCACTCTATGCATCAGCTTATCTTTCAGGAATGCAAAAAGCTTGCATTTAGAGCCGCTTATATCCTCGGGGATGCCTAAGTACGTTCCCATTCCTCCTTCGTTCTGTATTCCAAGGGCATCCTTAATCTCTTGTCTTGTATTTGCATTAATCCGCTTACCAAAGAGTAAGGAGGACTTGTCAAAGTTGATGCATTGACCAGATGCTTTACCATATTTCCTGACTACTTTCATTACTTCTTCACATTCACGGGGCTCCGCCTTACAGAAGAAAAGGCTATCATCAGCAAAGAGAAGGTGGGATACCGACGGACACGTGCGTGTAACACGCATCCCTGTTATCTTCCCTTGTATCTCTGCATGATTAAGAAGGCTAGCGAGCGCTTCCGTGCATAGAATAAAAATGAAAGGAGACAAAGGATCTCCTTGTCTTAGTCCTCTACCTGGAATAATATTCCCTCTTGGCTCTCCATTCATGATAACCTTATATTTCACCGATGTAATACATCGCATGACCCAGCCGATCCAAGTTTCTGAGAATCCCATTTTACGCAGGACAGCTTCAATAAACGACCACTCCATCCTATCATATGCTTTGCTCATATCAGTCTTGATGGCCATCCTTTTATTTCGTCCACTTGGTTTCGGTCTCAATGCATGGAACATTTCCTGGGCGATCATAACATTATCCGAAATCTGTCTCCCAGCAACAAAAGCTGACTGGGTTTCCGATATCAGACCTGGTAGCACTTTTTTCAACCTCTGGCATAAGACTTTAGAGATTATCTTGTAGCTAACGTTGCACAGACTTATGGGTCTGAATTGATACATTGCAGTAGGCTTTGTTATCTTCGGGATGAGACATATATTTGTGTCATTCAGTCCGTTCGCCATCGTCCCCTCAAAAAGAAATTTATTAACCATAAGGGTTAAATCCTCCTTTACTATATCCCAAAATTTCTGGTAGAAAAGTGCAGTCATCCCATCGGGTCATGGAGCTTTCTCTGGGTGCATGGCAAAAAGCGCT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

762

Start:

12007227  

End:

12007988

Strand:

-

>A01_LINE-L1_85

CCGTAACTCCTCATTATCCAACCATCTTTTATCAAATTTAAACTTTTTGGATCGTCTCGTTGGCTTTATGAGTATGTCTGCAAGAATCGGACGATGGTCCAATCCCCATAGCCTCATGTACTTAACATTCGAGTGTGGAAACTTCTCATGCCAGTCCCCATTTCCTACCGCTCTGTCCAAACGACATCGAACAGTTGATCCTCCAGCTCTCTTCCCCACCCAAGAAAGCATATCTCCCGTGAACGGAAATTCTAACATGCCACAATCATTAAGCATCTGCTTAAAAGGAAGAAAAGAGCTATCAGGGCGTTGTCTTCCACCTGTCTTTTCATTGTGACATGTTATCTCATTAAAGTCTCCTATCATAAACCAAGGTCCATTTCTTGTTGTTGAGAAACGCGTAAGACGTTCCCAAACTTGATCCCGTCTTTCTAGTACAGGGTCGCCATAAACAAACGTCATATAGACTTTTATTCCATTAATGATTGCCTCAATGTCAATCATACGATTATTCGAAAACAAAACATTAACTTGAAATTCATCCATAAAAAACAAAGCTAAACCTCCGCTGAGTCCAAGTGGCTCAACAGTAAACAAATGATCAAATCCTAAGTCGGTCTGCATGTTTTGCAACAGCAGCCTTCTGTTCTTCGTCTCAGAAAGAAACACAAGTCCTGGGCGATGCTTCTGACACATCTCCGTAAGGCGTCGAACTGTGAGGTCGTTTCCAATCCCTCTACAGTTCCAACTGAGCGTCCTCAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

463

Start:

12123559  

End:

12124021

Strand:

-

>A01_LINE-L1_86

TTTTTTTTTTGACAGCAAACATTTACAAACTCATATTGATTCTGTAAACCAAGATGGTAACTCTGCATCCATATGTAAGACGAAAGACGGTTGTTTCTGAGCACTGCGTACTAAGTTATCCGCCTTAAGGTTCACCGTCCTAGGAACATGAATGATTTCTGAGTTGAGGAAACTTCTTCTGAGAAGCTTAATGTCTTCTAGGTAGCTTTCAAATGCTGGCCATTTTTCTGGTTCTGAAACCATCTTCACCAATTGAGAACAATCCGTTGCAAATGTAACCTGAAATTGTCTTAAACTTTTCACATTTCATTGCCCATATTAATGCCTCCATCTCCGAATGGAGAGGGGAGAGACATGCCCGTACATTCCTTGTCTTTAACAATCCATCAAAACCCGGGAGAGTGCTAAACCAGCCTTGCCCTGAAAACATGTCCTTATCCTTCCATGAACCATCTGTGAAACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

549

Start:

12136758  

End:

12137306

Strand:

+

>A01_LINE-L1_87

TTTTTGCAAGACTTTCAAGTTTCTTTTGGTTATAATAAATTATTCACCGTATAACCGGAAGGTAGAAGCGGTCGACTAGCACTTTTTTATATGGATTCGTATGATGTTTCTGTTCTCTATTTTGATAAGCGTATGATTGATATATCTGCTACCATAGAGGGACATAAAGTCTATCTGACCTTTGTCTATGGTGATCCGGTCGTTGAGTGCTGAGACTATGTTTGGGAACATTTAACCCGTATGAGTACTACCAGAACGGGAGTGTGGTTTATGTGTGGTAATTTTAATGAGATAACAAGGAACCATGAGAATATAGGGGGAAGGAAGAGACCCGAGACATCCTTCATCGCCTTCAAAGCAATGCTAGCGGATTGCGGAATGGTGGACTTTCCGTATAAGGGTAACCCAATGTCCTGGGTGGGTTATCGCAGGTCTAGAAAGGTCCAATGTAGTTTGGATAGAGCGGTAGGCAATGAAGATTGGCACCAATACTTCTCCCACACGAATGTGGAGTATCTTAAGCTTTGGGGTTCCGATCACCGTCCGGTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1760

Start:

12137600  

End:

12139359

Strand:

+

>A01_LINE-L1_88

GGAAACTATGTACGGCATTCCGAGAGGAAGAATTATATTGGAGACAGAAAAGTAGGGCTCTGTGGCTAAAGAATGGAGATAAAAAAATACCAAGTTTTTCCATGCCATAACAAAGCAGAGACGAGCTCGGAACCATATTACTAAGCTAAAATCTTTGAATGGGGGTTGGGCTGAAAGCAAAGATGGGATTGAAAAAGTAGCATCGGAATATTTCCAGAACTTATTTAAATCCTCACAGCCAAGAGATTTCGAAGAAGCACTCCGGTACATTACTGCGAAAGTGACTCTGGCCATGAACACAACGTTGACGTGCAGTCCAACTGATAAAGAGATAAAAAAGGCAATAGATGAGATAAATCCCGACAAGTCGCCAGGTCCAGACGGTATGACGAATCTCTTTTATCAACGTTTTTGGGAAGTTACGACAACAAACATCATAAAGATGGTGAAAGCTGTCTTTGGTACGAACTCTTTCGACACAAGGCTAAACCAAACACACATTTGTCTTATTTCAAAAACAGAACGTCTGAGAGAGATGACTGAATTTCGTCCCATCAGTCTATGCAACGTCATCTATAAGATCATCTCGAAGATCCTATGCTCGCGCTTGAAGAAAATTTTGCGTAAACTAGTATCGGAGACCCAATCCGCCTTTGTGGCGAGAAGACTTATCTCAGATAATATTCTATTAGCCGAGGAAGCTTTCCATGCTCTTCGTACAAACCCCATGTGTAAAGTGAAGTTTGTGGCTATCAAAACAGACATGAGTAAAGCATATGACCGAGTCGAATGGAATTTCCAGCCCTCTCACTAAAACTGGGCTTTGCTGAACAATGGGTCTCTTGGATTCACTGGTGCATTTCCTCGGTTTCTTACCAGGTTCTTATAAACGGAGAACCAAAAGGTAATGTCTCACCGACTCGAGTCCTGCAACAAGGTGATCCATTATCCCTTTTTTCTTCAATTTGTTGACAGAAGCTCTTATATCACAATTAAAAGGAGCAGAGGATGAAGGACGGATCACAGGGTTGAAAATCGCAAGAGCAAGCCCAGCAGTGTCTCATCTTTATTTGCAGATGATAGCCTATTATTCTGAAAAGTGGATGTCCAGCAATGTACTGAGCTAATGAGGATCATAAAGCTATATGTAAGGGTGTCTGGTCAACAGCTTAACCTAAATAAATCCTCAATCTCTTTTGGGAACAGAGTTGAACAGGAGATAAAAGGAGTGCTGAAACACACACTTAGTATCCAAAAAGAAGGAGGAGTGGGTATGTATCTCGGCCTACCTGAAAAGATATGCGGTTCCAAACGACAAGTATTTGCTTTTATTCGAGATCGTCTAAATGACAGGATGAATTCTTGGTCTGCAAAATTATTATCCAAGGGAGGTAAAGAAGTTCTTTTGAAATCCGTCGCTCAAGCACTTCCTACGTATGTAATGTCATGCTTCTTGTTACCCAAAGAGATTATCTTAAAGCTACAAGGAGCAAAAGAGAAGTTCTGGTGGAGTACAAAAGCGAATAATCGGGGACCACACTGGATCGCATGGGAAAAGATATGCATATCTTTTGATAAGGGGGATTAGGATTCAGAGATCTTCATGCTTTTAACTTGGCCTAACTTGCCAAACAAATGTGTCGATTACTACATTACCTGAACTCCCTTGTAGCCCGGGTCCTAAAAGGCAGATAATGCCGATATATTAGCCCTATGGAAGTGAGAACATCGAATTCTCCATCTTATGGATGTAAGAGTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2207

Start:

12224036  

End:

12226242

Strand:

-

>A01_LINE-L1_89

TCGCTCTCCGCATGTCGGACTAACTCCAAAGGATCTCGATCTATGCCCCTGAAGAGTTTCTCATTCTTAGCCTCCCAAATGTACCATATTATCCAGGGATAAGGGTCCCTATCACGATCAGGCTCAATAATGCTATTTTTTCTCCAAAAAAGATAGTCCATATTTGTGTAGATGCTTGATACTGGAAAGATGTTCGGGCTTGTCGGAGTGGAAGCTAAAGACCAAACTTGAAGAGCTGGTGGGCATTCAAAAATTGCATGTGTGACAGTCTCTTCTGCTTCTCCACATCTTGGGCAGTAGTTATCATATCTCATATTGCGTTTTACCATGTTCCTTGTTACTGCCACATGACCAGTTAACAACTGCCATATAAGATGACATATTTTCGTAGGAGCCTTCAGTTTCCACGCAAACGCTTGGAGCTTGATAATACTTGGGTCCAAAACTTCCCTTTCCTCTGTTTTATTCAATAAATTCTGAGCCACCCAATATCCAGACTTGACCGTGTACTGACCATTCCTTGTGAAGTTCCAGCAGTAAGTGTCTCGACGATGAGTTGAGCTTATGGCCAAACTCCTAATGAATGGTATGTCATCAGGATGAACATAGTTCTCCAGTAAGCCCACATCCCAATCCTTCGATTCCTGATTAATAAGATCGCTTACTCGCATATTAGGGTGCATCACTGGAGCCATTGGGGCAGCTGGCCTCGCGGGATTCGTTGGAATCCATGGATCCTCCCAAACCTTGACCTTATATCCAGAGTGTATCTTCTGTCGAATGCCCAATAATAGCAGATTCCTTGCAGCAGAAATGCTTGTCCACACATAGGATGGGCCAGTAGCAGCGATTACTCTTAGTGGAGAACTCAGCCTATAATATCTCCCCCGTAGCACACGGGCCACCAGAGAATCAGGGAATTATACTAGTCTCCATAGTTGTTTTGCCAACAATGCCAGATTAAACTCATGGATCATGCGAAAACCAATCCCTCCCTCCTCTCTGGGTAGGCAAACCTTGTCCCATTTCGCCCAGTGTATCCCTCTTTTTGGTGGATTCGAGCTCCACCAGAACTGAGCGATAGCACTAGCTAAGTTTTCACATATCTCCAATGGGAGAAGGAAGGTTGACATGACGTATGTCGGAAGAGCGAGCAGAATGGATTTAATCAACACTTCTTTTCCACCTTTCGAAAGCCATCTACCTGTCCATCCATTCACTCTATGCATCAGCTTATCCTTCAGAAATACAAAAAGTTTGCATTTAGAGCCACTTATGTCTTCGGGAATGCCTAAATAAGTTCCCATTCCTCCTTCATTCTGTATCCCAAGCACATCTTTTATCTCTTGTCTAGCAATTACACTAATCCGCTTACCGAAGAGTAAGGATGATTTATCAAAGTTGATACATTGACCTGATGCATGACCATATTTCCTGACTACTTTCATTATTTTTTCACACTCACGGGGCTCCGCCTTACAGAAGAAAAGGCTATCATCAGCAAAGAGAAGGTGGGATACCGACGGACACGCGCGTGTGACACGCATCCCCGTTATCCTCCCTTGATTCTCTGCATGATTAAGAAGGCTAGCGAGCGCTTCCGTGCATAGAATAAAAATGAAAGGAGACAAAGGATCTCCTTGACGTAGTCCTCTACCTGGAGTAATATTTTCTCTTGGCTCTCCATTCATAAGGACCTTATACTTTACCGATGTAATACATCGCATGACCCAGCTGGTCCAGATTTCTGAGAATCCCATCTTACGCAGAACAGCTTCGATAAAGGACCATTCCATCCTGTCATACGCTTTACTCATATCTGTCTTGATAGCCATCCTTTTATTGCGCCCACTTGGTTTGGTTCTCAGAGCGTGAAACATCTCCTGAGCAATCATGACGTTATCAGAAATCTGTCTCCCAGCAACAAAGGCTGACTGGGTTTCCGATATCAAACCAGGAAGCACTTTCTGCAACCTCTGATATAAGACTTTAGAGATTATCTTGTAGCTGACATTGCACAGACTAATGGGCCTGAACTGAGTCATCGCATTGGGCTTCGTTACCTTCGGGATAAGACATATATTTGTATCATTTAGTCCATTCGCCATCGTTCCCTCAAAAAGGAATTTGTTAACCATAAGAGTTAAATCCTCCTTTACAATATCCCAGAATTTCTGGTAGAAAAGCGCAGTCATCCCATCTGGTCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

758

Start:

12226819  

End:

12227576

Strand:

-

>A01_LINE-L1_90

AGCTCTTCATTATCCAGCCATCTCTTATCAAACTTAAACTTCTTGGACCTTCTCGTTGGCTTTGTGAGTATATCTGCAAGAATCGGACGATGGTCCGATCCCCATAACCTCATATACTTAACAGAAGAGTGGGGAAACCTCTCATGCCAGTCCGCATTTCCAACTGCTCTGTCTAAACGACATCGAACTGTTGATCCTCCTGCTCTCTTCCCCACCCAAGACAGCATGTCCTCTGTGAAAGGAAAATCTAGCATTCCACAATCATTAAGCATCTGCTTAAAAGGAAGGAAGGAACTATCAGCGCGTTGTCTTCCTCCCGCTTTCTCTTCGTGGCATGTTATTTCTTTAAAATCACCTATCATGAACCAAGGTCCATTTCTTGTTGTTGAGAAACGCGTAAGACGTTCCCAAACCTGATCTCGTCTTTCTAATACAGGGTCTCCATAAACAAACGTCATATAGACTTTTATTCCATTAAAGACTGCCTCAATGTCAATCATACGATTATTAGAAAATAAAACATTAACTTGAAAATCATCCATAAAAAATAAGGCTAAACCACCGCTGAGTCCAAGTGGCTCAACAGTAAACAAATTATCAAATCCTAGGTCAGCCTGAATGTTTTGCAACAGCGGCCTTTTATTCTTCGTCTCAGAAAGAAACACAAGTCCTGGGCGATGCTTCTGACTCATCTCCGTTAGGCGTCGAACTGTGAGGTCGTTTCCAATCCCTCGACAGTTCCAACTGAGCGTCCTCAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

613

Start:

12290085  

End:

12290697

Strand:

+

>A01_LINE-L1_91

GGACCAGATGGGATGACTGTGCTTTTCTATCAAAAATTTTGGGATATAGTAAAGGAGGATTTAACTATTATGGTTAATAAATTCTTTTTTGAGGGGACGGTGGCGAATAGACTGAATGATACAAATATATGTCTCATCCCAAACACAACAAATCCTAATGAAATGGCTCAGTTTAGACTCATTAGCTTGTGCAACGTCAGCTACAAGATAATCTCTAAGATCTTATGCCAGAGATTAAAGAAAGTGCTGTCAGGCTTGATATCGGAAACCCAGTTAGCTTTTGTTGATGGGAGACAGATTTCAGATAATATTATGATTGCTCAAAAAACGTTCCACGCTCTGAGAACCAAACCAAGTGGACGCAGTAAAAGGATGACCATCAAGACAGACATGAGCAAAGCATATGACATGATGGAATGGTCTTTTATTGAAGCAGTCATACGCAAGATGGGCTTCTCAGAAACATAGATCACCTGGATAATGCGATGCATTACGTCGGTGAAATTTAAGGTCCTCATGAATGGAGAGCCAAGAGGAAATATTGTTCCAGGTAGAGGTCTACGTCAAGGAGATTCTTTGTCTCCTTTCATTTTATTCTATGCACGGAAGCGCT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

461

Start:

12318293  

End:

12318753

Strand:

+

>A01_LINE-L1_92

CCTTCCAGGATGCAAGATATGAGGCCAATAAGCTTATGCTCGGTCCAGTACAAAATTATCTCAAAAATTCTCTGCAACAGATTGAAATCGATCCTGCCTGAGATAATTTCGGAAACCCAAGGTGCTTTTGTATCTGGTCGGCAGATCTCCGACAATATTATCATTGCCCACGAGATGGTCCACGGACTCCGTACAGTGGAGAAAGTCGCTGAAGGCTGGATGGCTATAAAGACGGACATGTCGAAAGCATATGATAGAGTCGAGTGGAATTTTGTTGAGACTTTGTTAGAGAAAATGGGGTTCGACCATATATGGATTCGCTGGGTGATGGCTTGTGTTAACTCAGTCTCTTTCTCGGTTTTACTGAACGGTGAATCACATGGCTACATCAAACCGGAACGAGGTCTTCGCCAAGGAGACCCGTTATCTCCTTTTCTGTTTATTCTTTGCGCAGAAGCTTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

638

Start:

12318832  

End:

12319469

Strand:

+

>A01_LINE-L1_93

TCACCTTCTGTTTGCGGATGACAGTCTACTGCTTTGTAAAGCGAATTCAGAGGAAGCTGCGGAGATTTTGGCGTGCCTTAAGCTCTATGGTGATGCGTCGGGTCAAGTAGTCAATCATCTTAAATCCTCAGTTATCTTTGGCGCCAAGGTACCTGATGTGACTAAATCTGAGGTGAAAGGAATTCTCGGGATTGATCAGGAAGGTGGAGAAGGATCCTATCTGGGTCTTCCAGAGTGTTTTAGTGGTTCTAAGATCAGACTCTTAAGTTTCATTCGGGAGAAGCTGCAAGGTCGTCTTCGAGGCTGGTTTTCCAAGGCTCTCTCGCAAGGTGGAAAGGAGATTTTGTTGAAATCAGTGTGCTTAGCTCTTCCAGTGTACGCGATGTCCTGTTTCAAGCTTCCTAAGGACGTTTGTACGAAGCTTACCAGTGTAATGATTGAGTTTTGGTGGAGTAGCGGAAATAACAGAAAAAAGATTCCTTGGGTGGCGTGGCAGAAGCTATGTAAAGAGAAAGAGCTGGGAGGGTTGGGTTTCAAAGATATTGAGAAGTTTAATCAGTCCTTACTAGCCAAACAGACATGGAGAGTTTGGTCGGAGCCTAATTCCTTATTGTCTCGGTTGCTCAGACAACGCTACT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2489

Start:

12352913  

End:

12355401

Strand:

-

>A01_LINE-L1_94

ATATGTTGGATTTGAAAGTGAGAGAAGAATTTCTTACATAGTTTAGTCTCCTCCATTTGGGGTGCGAATGCTGGTTATTATGTCGGTATATATACCATCTTCACCAACTATGAATATTCTGTAGCGAATCTCACCTCTGAGAACTGTAGGACCGTCATACACTCCATGACCCAAATAAAAGCTTCACATTCTGCATGTAAAGATGTCTACTAGGGAAATTCATTGACCCCATAATCTTGTCATTTGAAACTCTTGTGCACGAAAACCATCCTTGTCATGAAAATTTATCTTGTCAACTCGATGATCCATCTACATAACACCATCACATATCTCCTTCTTGTTATCCCATTTGCGAGCAATATGTATCATCTAGATTTTTTAACATCGTTAATTTGTGGTTTAGTCGGCAATTTTCTCTTTATTTCTGCTAGACACAAGATCTCTTATGGGTTTCCATTTTTTTATAGTTCTTGTCATTTCTATTTTTTCCAAATGTACCATAAAATCCATAGAAAATAATTGAAGTCATGATCCTTAGGAAGTCTCCAAAACAAATAATTCATGTTCACGAATATCAATGATACTGGAAAAACTCATGGATTAGATGAAATTTGTGACATCGCCCATATTTAAATTGCTGGTGGACATTCAAATAGGATGTGATTAATTGATTTGTCATCTGCACCACATGTACTGAATTCCTCTTGACTTTAAAGCCTTAGTAATTGGTAAATATCTTGATAATGCTTGCCAAACAAAATGTTTAAATTTTGGACAGAATTGAAGCTTCCAAGTGTACACCAAAAGTGGTTTAGTGTTTGGACTATAATACTATGTGTTTGTATTCATATCTGGGTATAATTTTCTGTTTTATATCTTGATTTCACTGTATACCTCCCAAATAATATATAATGTCATCCATATGTATCTAGTTTAGAGGTTCGACTCACTGCCATACTTTGAATGATTTTCACATCATCCGGGTGAATATATTGCCTTAAGAAAAATTTACATTCCAAGTATGATCCACCAGATTAATAAGATTATCCATATTAAGTAAAAGTAGGAAATTCATTTTGAAGTTTTGGTAATGCTGACCTCGGACGAGGAGCGGAAATCCAAGAATCATTCCATATTGACATAGATTTCCATGTACACACTGATTTGATTAGCCATTTTTTAACTAGAATTGAGCAAAAATCATACTTCTCCAGCCATATGATGTCGAATATGATTTTATTCGATCCAAAAAATATGAGTTTTGATAATACCTCCCTCTAAAGAAATTTGCAAATAAATATTTTGGCTCTCTATCAGTTTCAAAAATATTTTGCTAATAAAAAAATATTGAAATTTTGTAGGTCACAAAAAACTAATCTCCCATCTTCTTTATCTCTGCACACTTTTTCATATGAATACCATACATACCTTTTACGTTTCCTCTACTTCTCCACCAAAATTTTTCTATTATACTCATTAGTGTTTTCATCACCATTTTTGTCAACCTAAAACATGACATAACATGTGCAGCCATCGCTGATGTTATTTTTTTTCCTCCTTTTGTAAGAAAGCGAAATGTCCAACTGTTCACTTTATTATTAATCTCCCTATTTCCGAAACCAAAATTTTGGGTCTTTGACCCGCTTTAACTCTCTAAGATTTCTAAATAATTACTCATTCTCCCGATGGTTGTTATCCCCATGAGGTTTTGTATTTCCACCCTCGTGTCTTATATGACCTTATGAGGAACTGTAAAGGTAATTTGGAGACAATAATTTGTTGACCAGACACATGCTCATACACTTTAAGGATATTTAAAATAACCTTGCATTCTTCTTTTTTCTTCAAGAAAAAATAAATTATCATCTGCAAATAGATGAGGGATTTCGTACATAAAATAAAAAAGATAGGGTGATAAAAGATCTTCTTGCGTCAATCATCTTTTTGGTATAATATGTGTTTTAGTTGTCCATTTATGACGATTTTGTATTTTACCAATGGGATGCATTTCAACAGCCAGGAAACCCATACCTGTGAAAAATACCATTTTAGGAAGAAGTTGTTGTATAGAAAGCCATTCAAATCAATAATATGCCTAACTCATTTCCGTCTTTAGTGAGGCATTTTTCTTACATAAATTATTTGTTCGTAGCTCATGAAACATCTTCAAGAAATTAATATATTGTCTGAATATAGACGTTCTGACATAAACACAAACTGAATCTCCAAAATCAACATTAGAAGTAATACTTTCAATCAATGACAAAGCACGTTCAAAAATAGTTTTATATCCCACTTACACAAATTAAATGGCCGTAACTCCGTCATATTACTTGACCTAATTTTTTTTGGAATAAGAAAAATGTTAATTATATTTAATCTTTGATCAAATGATCTCGAGTGTAGAAAACTATGTTAACGGTAACAACAAAATCCGCTTTAATGATTGACCACGATTGCTGGAAAAGGCTATAATACCATCCAGCCCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

404

Start:

12355892  

End:

12356295

Strand:

-

>A01_LINE-L1_95

ATAAAAAGCCAGTCCAGTCGATAGTATACCGTACTCATATTTGTCTTTATTTTTAGATATTTTTCTTAAATGGGTTATTTATTCGTAACTTGTGAAACATATTTAAGAAATTAATATATTTTCGACGTCACGACACAAACGTAGTCTGAGTGTCCAAAATCGACTTTGGAAGTAATACCTTCAGTCTTTGACAAAGTACCTTTGAAATAATTTTATTTAAACTAAATGGCCATAACTCCGTCATATGATTTGACCTAACCTTTTTTAGAAATCAAATAAATATTAGTTACATTTAATCTTTTATCAAATGATCCCGAGTCTAGAAAAATGTTAACGATAACAACAACATCCACTTCAATGACTGACCACGATTGTTGGAAAAAGACTATCATGCCATCCAGTCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

271

Start:

12411885  

End:

12412155

Strand:

-

>A01_LINE-L1_96

CCACTTTGGATTGGCACTCACTATATCAAAAAAGCTTTTGATAAGATGAGAACCTATTTTGCCAATCCATGAAAATTTTCCATTTGTTCATATATCTCGTAAATCATAGGAACTAAACCTATTTTTAAAATAGACAAAGATTCATCACACGATAGGCCCTTTTTCTATTATTTGATATAATCTTGTTGAAAATCCCTGACCAATAACCAAAGTCCTTGTTTAATACTACCAATACGTTCTAATTTTTCCATAAATGGTGTTAATATTGTTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

220

Start:

12414800  

End:

12415019

Strand:

-

>A01_LINE-L1_97

GATCTAGTTACCATAAAAGAAAACAAAAAAAAACATATTTCATTGTTTTCAACATAAATATCAATTAATCAGGAAGATTCATACAATTTTTTTACTACTTCTTGCTTCCATAATACTGCTAAAACTCTATTTCTACCTCAAGGAGATACTAAACATATGTAATCAAATTCTAAGGACACACTTACATCCCTTACAATATCATTTTTATTCATAGTTACTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

4068

Start:

12752816  

End:

12756883

Strand:

+

>A01_LINE-L1_98

CTAAGGGAAATTGTCGTGGAGCGGGAAGCAAGTGGACTATAAGTTATATAAGAGAAATATGGCATAAACATAAACCATATTTTTATTTTTATCTGAAACAAAGCAGGACTTGGAGTTTGTTCAAGATTTTCAATCACACTTTGGATTTGATAACCTGGTTACAGTAGACCTAATTGGGAGGAGTGGTGGATTAGCTCTTTTTTCAATAATGAGTATCAGGTTAAGATTTTATACTCCAGTAACCGAATGATAGATGTGGAAGTGGTGACTCTTGGAAAAACGGTTTATTTAACTTTTGCGTATAAGGTCCCAGTCCAAAAACTGAGGGAACAAGTATGGGAGCGATTGACTAGATATGGGCTATCGCGATCCGAAACCCTGGTTTATCATTGGAGATCTAAATGGGATCACTGGAAATCATGAAAAAGAGGGAGGATCTTTGAGAAGTGCGGATTCTTTAATCCTTTTAACAACATGATAAGAAATATTGGTTTATTAGAATTCCCAGGTCGGGGAAACAAAATTTCATGGCAAGGGAGAAGAGAAAAAGAGAAAGGTGCAGTGATGATCAGATGTCACCTAGATCGTGCTCTAGCAAACGAGGAATGGCATACTCTTTTTCCATGTTCTTATACAGAATACTTAGGAATGATAGCATCTGATCATCGTCCAGTGGTGGCCTACTTAGTAGATAAAGTTTCCAGAAAGAAAGGGCAGTTTCGGTTTGATAAGCGTTGGATTGGACAGGATGGCCTGATGGAATCAATTAAAATGAGATGGTCGGATTATAGTGAAGGACAAACATAAGATGTAGTGGCAAAGATTAGCAATTGTCGGCATGAAATTTCTAAATGGCGGAAAAACAATCCACCTTATGAAAAGGAAAAAAATAATGAATTACAAAAGTCTTTCTCTTTGATACATACGAATAATAACAGATCCCAAGAGGATATTATGGAGGTATCAAGGAAGTTACATGATGCATATAAGGAAGAAGAGGACTACTGGCATCAGAAAAGCAAGAATATGTGGTATTCATCTGGGGACCTTAATACAAAATTCTATCATGCTTTAAAGAAGCAACGGCGGATTCACAATAGGATTGTGGGGCTACATGATGCTGCGAGAAATTGGATCACAAAGGATAAAGGTGTTGAAAAGGTGGCAGTGGACTATTTTGAAGATCTATTTAGTACCACTTCACCAACGGAGTTTGATAGTTTCCTGACAGAGATAACACCGGTCATCACTTCTCAGATGAATCAAAATTTACTAAAGATAGTGACTGAGGATGAGGTTAAACAGGCGTTGTTTATGATGCATCCAGAGAAGTATCCAGGACCGGATGGCATGACAACTCTTTTTTTTCCAACATTCCTGGCATATTGTTAAGAATGATCTGGTAGAGATGGTGAATAATTTTTTGATTTCAGGAGAAATGGATTCAAGGTTAAATATTACTAATACTTGTATGATTCCGAAAACGGAAAGGCCTACAAGGATGCAGAACTGTAGCCAATCAGTGTATGTAATGTAGGGTACAAGATTATTTCGAAGGTTTTGTGTCAGCGATTGAAAATCTGTCTCCCCTTTCTCATATCAGAGACCCAATCAGCATTTGTGGCAAGAAGGTTGATCTCAGATAATATTCTTATAGCTTAGGAAATGTTCCATGGATTACGGACCAATAAAGCATGTCAAGGAAAGTATATGGCAATCAAAACGAACATGAGTAAAGTGTATGATATGGGGGAATGAGATTTTATTAAGGCTCTACAACAAAAAAAAATGGGGTTTGATCTACAGTGGATTAATCTAATGATGGAGTGTATCTCGTCGGTTCAATATCGGGTTTTACTAAATGGTCAACCACAGGGTCTCATTGTCCCACATATGAGTTTACGTCAAGGAGATCCACTATCTCCTTATCTATTTATTTTATGTACTGAGGCTTTGATTGCAAATATCAAAAAAGCGGAGAGATGGCAACAATTAACGGGGATGAAGATAGCCAGAGCATGCCCATCGATATCTCATCTGCTTTTTGCAGACGATAGTCTATTTTTTGTAAGGCTCAAAAAGAAGAGTATCACACCATTCTCAGGATTTTAAAGGAATATGAGGTCGTATCGGGTCAACTCATCAATTTTGATAAATTCTCAATCCAATTTGGACATAAAATTGAGGAATCAACCATATAAGAGTTAAGAGATATATTGGGAATCCAGAATTTAGGGGGAATGGGATCTTACCTAGGCCTACCAGAAAATCTTGGAGGTTCAAAGATACAAGTTTTTAGCTTTGTGCAGGATCAGTTAAATAATAGGATCAATGGTTGGACTTTTAAATTTTTTACTAAAGGAGGAAAAGAGATGATCATTATGTCAGTGGTCACGTCATTACCAAATCATGTTATGTCTTACTATCGTTAACCTAAGATAACTGCAAATAAACTGACAAGTGCAATAGCCTAATTTTGGTGGAGTTCAGAGGGAAGCACAAAAGGCATGCACTGGAAATCAAGGGATAAAGTTTCTGTAAATAAGGATGAAGGAGGTTTGGGTTTTAAAGATATTAGTGATTTCAACACAGTGATGCTTGTAAGCAGTTATGGCGTCTGATAGATAAGCCTTATACATTATTTTCTATAGTTTTCAAAGGTCGGTATTACAGGAACGCCTCACCCCTTGAACCGATTCGTTTATATTCTTCGTCATATGGCTGGCCGAGTATAGTATCTATTAGATTTCTGGTAAGCGAAAGGCTAATCAAAACGGTGGGATCGGGATCATCTCTATGTGTATGGAATGATCCATGGCTTCCAACCACTCGCCCGAAACCAGCAAACAAAAATTAACATAATCTTTACCCATACCTTATAGTGGATTCTCTCAGTGATTCCACTTCGCGAACTTGGACTCGCAGGCAATTCAAGCTTTAGTGGATTCCAGGGATGCAAAAATTATCGAAAGTATACCACTGAGTAGTAGTCAGATGGTAGATAGATATGGTTGGCATTTCACACAACATGAGAAATACACGGTTAAATCAGGATATCAGATAGAACGGGTTTATCGAGATAAGGAAAAAACACCAATGCTGATTGGACCCACAGTTGACGTATTAAAGGCTTTATGCTGGAAAATACGCTGTCCCCCAAAAATAAAACATTTCTTATGGCAATTGGTGTCAGGATGTATATCAGTTAGGAAAAATCGGCGAGCGAGAGGGATACAAGGGGATATATGATGTGCAAGATGCGGAGCCGATGAAGAATCGATAAACCATGTATTTTTTGAGTGTCCTCCAGCACTTCAGGTTTGGGCCTTTTCTACGATACCTTCAAATCCAATCATTTTCCCAACAAGTTCCCTCTTTAGAAACATGGATCATCTATTTTGGCGAGTTCTCCCGCAGATGGACGATCATCAGTTTGCATGGATTCTATGGTACATTTGGAAAAGACGGAATAATAAAATCTTCAGTAATCTGGACATTAATCCTAGGGACACACTTAAATTGGCAGACACAAAATCTATACTATGGGCTGAGGCACAAATATTGGACACACAGAGGACACCACCACACATAGAGGCAGTGACCCTACCCTCAATACCAGGAAGATGATGTTTCACAGATGGTTCTTGGAAATAGAATGATATTTTCTCTAGACAATGTTGGTTTAGTACTCTAGCGGGTTTTGATGGGGTGATGAGGGCGATAAATGTTAGGGCTAGTCTCTCCCCTCTTCATGCGGAGATGGAAGCACTATTATGGGCAATGGAATGTATGAGAAACTTACAACAGTTTCAGGTTACATTTGCAACGGATTGTTCTCAATTGGTGAAAATGATTTTAGAACCAGAAGAATGACCAGTTTTTGCAAGCTATTTATAAGATATCAAGACCTTGAAAGGAAGTTTTTCAGATCAGAGATCATTTATGTACCAAAGACGCAAAACTTAAAGACAAATAGCCTAGCACGTAGTGTGAGGAAGTAACCGTCTTTCATCGTTCACATGGATGCAGATCTTCTGGTTTGGTTTACAGAGTCAATATGAGTCTGTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

703

Start:

12817660  

End:

12818362

Strand:

+

>A01_LINE-L1_99

ATTCATTCGCTCGAGACCAACAAACAATAATTTTTTTTTGTCACAGATTCTGCATTTACCGTAGATAAGCTCATTAACTCTACATCTCATATGTGGAATTCGCAGTATATCAGAAATTTGGTGGATTCGGAAGATGCGAAACTCACTGAAAGCATTTCTTTAAGTAGGTTTCAGACTATAGATAGGGATGGAAGACATTTTACACAATCTCGGAAGTACTCAGTTAAATAAGGCTATGAAACAGAACAGCCTTATTCGGATATAATGAGGCATGTACCCATATTTTGACCGGACACAAAGTCTTTGAAGGCTCACTCATGGAAAATCAAGTACCCTACGAAGCTGCAACATTTTTTTGGCAAGTCTTTTTGGGGTGTTTACCGGTCCGGACGAATTTTAAAACTCGTGGCATAAAATGTTATATTCCTTCTGAACGGTGTGGACAGACTGAGGAGGCGGGTAATCATGTTCTATTTGAATGCCCCCCGACCATACAAGTATGAGCTCTTTATAAAGTTTCCACAAACCAGGGAAGTTTCACATGCAATCAGTTTTTTGCAAATATGGACTATTTATTATGGTGGATGAGATCTATAGAGGATCACTAATTTGCTTGGATTCTTTGGTATATTTGGAAATAACATAATGAAAAGATTTTTACTGGTTTTGACAAAGATCCTACAAATACTCTACAACTGGCAGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

380

Start:

12818553  

End:

12818932

Strand:

+

>A01_LINE-L1_100

TTGCTGGAGGCACGAAATATAAAGCCTTCATAATCACTCCTTCATTCAGAATTTGAAGCATTCACTTGGGCAGTGGAGGGTATAAAAAACCTCAGACAATTTAATGTTACGTTTGCGACAGATTTTTTTCAGTTGGTAAATATGATTTCGAAACCAGAATAATTGTCTGCTTACATAACTTACCTAGAAGATATTCAATGGCTGAAGAAGATTTTAACCTCCTTTCAGCTCACATGTACCTTGGACTCAGAATACAAGGACATATAATCTTTGAAGTGGTGCTCGATGTCAGTCATTATTTTTTTGTCCATATGGACACGGAATCATCATTTTGGTTAATATAATCTTAATTGAGTTTGTTTATGTTGATGACAAGAAAA