Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_21Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
446Start:
3082285End:
3082730Strand:
+>C01_LTR-Gypsy_21
CCAGAGAAGATGGAAGATCCTGGGAGTTTTGTGTTATCATGTGAGATCGAAGGAGCTGTATTCGAGAAATCTCTCTGCGACTTGGGATCTAGTGTGAACCTGATGCCATACACTGTGGCACAGAGGCTTGGTCTCACAAACTTCAGGTCAACGAAAATCCAGCTAGTCTTCGCAGATCGCTCAGTGAGACATCCCGTCGGAGTTATTTTAGACATCGATGTGGTGATCGGAAACCATAGAATTCCTGCAGACTTTGTAGTGCTGGAGCTCGATCAGGAGCCAAAGGACCCTCTCATTCTGGGACGTTCATTTCTGGCCACAGCAGGAGCTATCATCGATGTAAAGAAAGGGAAGATAGATCTCCATCTTGGAGACATAATCATGAAGTTCGAGGTGAATAAGATGCTGAAAAGACCCACACTGGATGGACACACGTTCTCCATCGA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_22Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
85Start:
3275265End:
3275349Strand:
->C01_LTR-Gypsy_22
GCCTCGTTAAAACCTTGTCATGGAAAAACCCAATGGGATAAAAAAAAAACCATGATAAGGAAAAAGAGTACAACCACACTTACTA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_23Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
404Start:
3289824End:
3290227Strand:
->C01_LTR-Gypsy_23
TTTTTTATATATTTTGGAACATTATTCTTTTAAGATGTTTTGTGCTCTTTTCCCATATTTTGACCGCGAGCCGTCACCATTTATGTATTTCGTTTATCTTTCTGGTGTGCGGTATTTCTCACCATTTCCAAAAAGACTCACATTCGTGCTCTTATTCTTCCTCGCCTTCTTCTCCTGTGAGATTATCTGATATTTTTTGTAAATCGGGTTTATGAATTCTCATTTGTGCGGTTGTTTCTGACGCGTTGTAGGCTGTTCCAGTCAATATTGACGCTCCTCTTCTTCCTTAGATTTTGGCATATGTTAGGAGCTGCATCCCCTTGGGTTGGGACAAATTTTAGTCGTCTTTGATGTTGTCTTCCCCGTCGTTGGTTTGCCGTCAATAATCCATGCTCGTCTTGGTT
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_24Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1312Start:
3374508End:
3375819Strand:
->C01_LTR-Gypsy_24
CCCCCTGCTTGAGATCATCCTTGTCCTCAAGGATGGAAATGAGGATACTGAGCAATGAAGTCCTTGTAGAACTCCCATGTTGCGTCTTCAGGACGTTCCCTTTTCCACTGGATCAAGACTTTAGTGACAGCTAAGTTGCGACGTTTTGCCATCTTTGTTTCCAAAATCATCTCAGGTTCCTTGGAAGTTCCCAAATCAGACCAAAACTGTGGCACCGTTGGAGATGAAGTAGGAGGGTTTGGACAAAGCTTTAGCTGGCTCACATGAAACACATTGTGTACTGCGGCCTCAGGGGGAAGTTCCAAGCGATAAGCTGCAGAGCCTACTGTGTCGGTGACCTTAAAGGGGCCGTAGTAGCGTGGAGACAACTTATGCGGGATTTTCCTGTTCTTGAGTGTGTTCTGTCGGTAGGGTTGGAGCTTGAGGTACACGTAGTTGCCAACCACAAACACCCTCTGTGATCTGTGTGAATCAGCGGCTTGCCTATTTCTGTTTTGAGCGCGCAGTAAGTGAAACTTGAGCATTGAGATTACCTCTTCCCTCTTGCGTAAGCTTCGGTCAACCAGTGTAGAAGAGCTTTCACCAGGTAGGTAAGGAAGGTGTAGAGGAGGAGTTTGACCGTAAACAATCTCAAAAGGTGTGCTCTTGATAGCAGAGTGATAGGTTGTATTGTACCACCATTCTGCTAGGGCGAGCCACTTGCTCCAAGTCTTCGGTGCTTCAGCAGTCATGCATCGCAGGTAAGTCTCCAGTGTCTTATTTGTGACCTCAGTCTGCCCGTCAGTTTGAGGGTGATAGGCAGTAGAGTATCGCAAGTCTACACCGTGGACTCTGAATAATTCCTTCCATACCTCACTTAAGAAAGTGGGGTCTCTGTCACTGACAATGTCCTTTGGAAGGCCATGTAGCTTGAAGATGTTGTCTAAGTAGGCTTGCGCAACTTCAATAGCAGTGTAGGGGTGAGATAAAGCAATGAAGTGTGCATTCTTACTGAGCCTGTCGATGACCACGAGAATGCAATGCTTCCCAGAAGATGGAGGGAGTCCTTCAATGAAGTCCATGCTGATTGATTCCCAAACACCTTGCGGAACTGGTAGCGGATGCAACAAACCAGGCTTTGCCACATTCTCATATTTGTTTTTCTGACACACGCTTCCAGAGACATTTTCTGCCAAAAGAAGAGCGATTTGATTCTGTGGAGTGTAGCATCTCTACCTGAGTGTCCTCCCACTGCAGAGTCGTGTAACCACTTGAAAATGTGAGTTTTGATCTCCACGTTGTTGCCAACTACTAGCTTTCCTTTTCTTCTCAA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_25Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1313Start:
3375983End:
3377295Strand:
->C01_LTR-Gypsy_25
ACTCGAGAGAGAGCGTATGCGGCCACATTTTCTTTCCCAAGCTTGTACTGCACCTCGAAATCGTATCCCATGAGCTTAGAAAGCCACATATGTTGGAATGGAGTAGTAGCTTTCTGTTCCATCATATATTTGAGACTTTTTTGGTCTGTTTTGATGATGAAAGGGCGATGTGCGAGATATGCACTCCATGTCTGAACAGCAAAGACTACAGCCATTAACTCCTTCTCGTAGACTGAAAGTGCTTGCTGTCGAGGACCTAGAGCACGACTGATGTAGCAGATTGGGTGACCTTCTTGCATAAGTACTGCACCAATTCCCGTGTTGCAAGCATCCGTTTCTACAACAAAGGTTTTGTTGAAATCCGGTAGAGCAAGAACAGGAGCGGAGCTGAGAGCATCCTTAAGGTTGTCAAGTGCAGTATCAGCTTCAGGACTCCAAATGAAACCGCCTTTCTGCAGCAGTGTAGTGAGAGGGCGAGACAGTATACTGTATCCTCTGATAAAGCGTCTGTAGTAGTTTGCTAGTCCAAGAAAGCTCCTCAATTGCTTTATAGAATTAGGGGTTGGCCAGCGTTTGATAGCGTCCACCTTAGCTGGATCAGTGCTTACTCCCTTTGCCTCAATGAAGTGCCCCAAGTACTCAATCTTTATGGCTCCAAATGTGCATTTCGAAGCTTTAAGATAGAGCTGCTGTTGGCGTAGGATGGAGAACACTTCTTGAAGGTGAATCATATGAGTTTCCCAATCTGGACTGTAAACCAAGATGTCGTCAAAGAACACTAGGAGGAATTTCCTTGAAATGTCTTTGAAAACATGGTTCATGAGGCTCTGAAAAGTACAAGGTGCGTTGGAGAGGCCAAAGGGCATAACCAGGTACTCATAGTGGCCTGCGTGGGACTTGAAAGCAGTCTTATACACATCATTAGGAGACATCCTCAACTGATGAAACCCGGCGCAGAGGTCAAGCTTAGAGAAGTAAACTGCTCCACCTAATTCATCAAGAAGGTCTTCTAGCAGAGGTATTGGATATTTATCCTTAATTGTTTGGGTGTTAAGGCCTCTGTAGTCGACACAGAGACGCCAGCCGCCGTCCTTTTTCTTCACGAGCACAATAGGTGATGCATACGGACTGTTGCTGCACTGGATGATTCCCTGTTGGAGCATGTCTTTCAACAGTTCATCAATAGCATCTTTCTGTAAGGAGGAGTACCTGTAGGGTCTAAGGTTAACGGGATTCGCATCAGCTTTCAACGGGATCGTATGGTCAAAGCCTTCTCTGAATGGAGGGAGATTCGTAGGTTCCTCGAACAGGTC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_26Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
84Start:
3377540End:
3377623Strand:
->C01_LTR-Gypsy_26
TTGAACTCCATTCTTAAATTCAGGAAATCCCATAAGATTGGTCCGAGTGTTGATAGCCACTGAACACCCAATACAAGTTCACAA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_27Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
119Start:
3377993End:
3378111Strand:
->C01_LTR-Gypsy_27
TCCTCATCTTCGCATTCCATGACAAAAATCTGAGATCTTTTGTGTTTTAGTTGATGCCCCGGTGTGAAAGCTTCATCACAAAACATACAGAGTCCCTTGGCTCTGCGATCTTGCATCTC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_28Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
504Start:
3799838End:
3800341Strand:
->C01_LTR-Gypsy_28
TGCTCCAACAGTAGCCATGAATGTCCTTCCAAATATCAAAGGCATCTAATGATCCTTGTTCATCTCAACAACTTGAAACTCAGTAGGAACAATGCATTCCCCTACTTGAACATGAAGGCTATGGATGGTTCCATATGGGACTGCTTTGGAAGAGTTTGCAAAGGTCAGGGTCAGCTGAGAACGCTCAACATCAGCAATACCCAAATCGTCTACAATAGCCTTTGAGACGAGATTCACACAAGAACCAGAGTCACAAAGAGCGCCCTTAAAGGTTGTTCCTGCGATAGAACATGGGAAAACAACCTTTCCAGGATAATCAACCTTAGACAATACCTTCAGTGCTGGTGTAGACAGTGCTTTGGTATAGAGGACCTTGATCTCCTCTTGAGTCTCTCTACAGTTTTTAAAAAACTTGAACAATGGACGAATCTGCAGAGCATCTTTGAATGCCAGTTCTTTAGGCAGCTTTCTCACCATCTTGTTAAAACCTATCAGATGTTCTTC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_29Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
481Start:
3801001End:
3801481Strand:
->C01_LTR-Gypsy_29
GCTAGCAGCCATGTTCTCAATCAGCTTAAGCTCTCCATCAGTGGTTTGAGTCATGGAGTCTCCATTGCTCGCAGAGTTTAGAGCACCTTGGTATTTCCAGTCCACTCCATCATAGAAAATGTCCAAGAGGTAATCATCATCAAATCCATGGTGAGGACATTCTCTGCGATAGTCATTAAAGCGCTCCCATGCGTCGCAGAAAGGCTCATCAGTGAGTTGTCTGAAGGAGGTGATCTTATTCCTCAATGCAGTTGTTCTCGCCTTAGAGTAGAAATGGCAGAGGAACGCTGATCGGACATGTTCCCATGAAGTGAGAGAGCCGGTAGGGAGAGAGTTCAACCACCGTGCAGCTTTTCCATCAAGAGAGAATGGGAATAACATGCACCTGATGTAATCTGGTGGAACACCATTCGCACGAGTGAAACTGCAGACTTTTTCGAGGCTCTCAATATGCTTCATTTGAATTTCTGTAGAGAGACCA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_30Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
193Start:
4254517End:
4254709Strand:
->C01_LTR-Gypsy_30
TGAGAAATCGTCCATAAAAACCTCCATAATGTCCTCAATAAGATCAGTAAAGATCGACATCATGCATCTCTGGAAAGTGGCAGGAGCATTGCACAATCCGAAAGGCATTCTCCTGTAGGCAAAAGTACCGTATGGGCAGGTGAATGTTGTCTTCTCTTGGTCGTCTGGATGAATGGGTATCTGAAAGAACCCG
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_31Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
338Start:
4255619End:
4255956Strand:
->C01_LTR-Gypsy_31
CCATTCTGTACATCAATCATGGCTCCAGCAGTAGCTAAAAACGGTCTGCCCAAAATGAGAGGATCTTTAGGTTCCTCTTCCAGCTCCAGAACTACAAAATCGGTAAGCACATATCCCTTTCCAACACCAACAGGGATGTTTTCTAGTACACCGACTGGTCTTCGCACTGATCGGTCAGCAAGGACCAAGGAGATCCTTGTAGGTTTGTAGTTCGTCATGCCTAGCCTCTCAGAGACAGAGAAAGGCATTAGGCTCACTCCTGAACCCAGATCGCAGAGACTCTTCTCAAAAGTAAGTGATCCAATGCGGCATGGTAGAACAAATGCTCCGGGATCTTC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_32Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
535Start:
4257125End:
4257659Strand:
->C01_LTR-Gypsy_32
TTGCTGGATGACAGGTTGTTCAACAAGGTGTAAGCTTCTTCAACAGTCTTGGTCATGAAATCACCATTACTTGCTGTGTCCATGGCATCTTGACTCTCTTCATGAACTCCATTATAGAAAATGTTCAGCAAACTCACATCAGTGTAGCCATGGTGAGGGCAGTCCTGTGTGTACTCCTTGAAACGCTCCCAAGCCTCATGAAAGCTTTCTGAATCAAGTTGCTGAAAGCTTCCAATTCTGCTTCTCAGATATGTGGACCTTGACTTGGTGAAGAAATGCTGTAGAAAAGCAGCTCTTGTCTCTTCCCATGTAGTAAGAGATCCTGGAGGGATGGACTTTAACCATCTGATAGCTTTATCAGCTAAGGAAAACGGGAACAACCTGCATTTCAAAGCGCCTTGAGGAACTCCATTATGTCTGCTGGTGTCACAGACTCGCTCAAAATGCTCCAAGTGATACATCGGGTCCTCAGACGGGTTTCCATGAAACGGATTTTTCTCCACCAAATTAATGAGACCAGTCTTGATCTCAAAGT
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_33Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
942Start:
4388342End:
4389283Strand:
+>C01_LTR-Gypsy_33
TGTTGGGGTCAAAATCGGTCACGACGGAATCAATGTCTGAAAGTCCCCGTAAAAATCAGCATGAACGTTTTTACGAAAAGAAATCTTCGTAAAGAGATCTTTACGAAGAACTTTGCGGTAAAATCTTGCACTAATCTCGGCTGATTCGTCGAAACTAAACACCAATAGTCCGAGAACACGTTCATGAAACATCAGAAAAAGATCCAGACAAGGTCGCCATGTAGCGACCGGTCCGCGAACGAGCTGGTCGCTACGTAGCAACCAACAAAGCCATTCGGTCGGTCGCTACGTAGCGACCGACCAGCGAACGAGTCGGTCGCTACCAAGCCACTTGGTTGGTCGCTACGTAGCAACAGACTTGCGAACGAGTTGGTCGCTACGAAGGGACCGACCAAACCTTTCGTTCGGTCGCTACGTAGCGACATATCCACCGCTGACCAGGTTGCAACGTAGCGACCGAACTGTCTCGGACATCAATCAATGGGTACGACCCAATTCCGTGCATTCTCGTCTGTTCCTCAATGCTAGCTCTCATGTACCGAATTCATATCATCTCTCACATCATTCCGATCGAAGTTACCGTTGAAACTTTACGATAAAAACCACGAGAACTTTTTTTGTCGAAAAGAAAATCATAACAAACGTTTCATGTCGAAAGACGACCCAACGAGGTCTAAAACGTGACTACAAGCCTACTTACGATTCTTTAAGAATGAGCTCGTAGATACTATGGTGGTTTATGTTTTTATTATAAAAACAAATATAAAGATAAGTTTCCGCAGAAAAAATGTTAAGTTTCCGCGGATAAACATGGAGATTGGAAAAAATGGAATATCTCCATTTTTCACTTAAGACGGCTTAAGGGAAAAAAGGGAAAAGCTAAAACCGACCTTGGAGGAGTATAGAAGGAGTCCTAGGTGAGAGGCACAAAGGGAGAACTCT
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_34Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
308Start:
4389481End:
4389788Strand:
+>C01_LTR-Gypsy_34
ATTTTCCGTCTTCTGATCGAGCTGCGACTCAACTAGGTTTAAGGTTTTAGGTTGCTAGAGCTAGGTAATTCGCTGACCGCTCTTGCAGCCAAAGCTTTTATAATCTCTTGTAATGATCGCAACGCTTTTACGCGGATGCGAAATAAGATCTACCTTTTCTATAAATTTGTTTTGTTATCTTTTCATATTTTTCGCATTTATTTGGTCAGTTGTCGTTGGCTCTTGCAAAGAATCCGGGACCTCAAGGAAAGTTAGGGTTTCCTGACTTTCTTCCGATTATGGAAATTGACGGTGTGAATTTCGGTTCC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_35Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
111Start:
4392084End:
4392194Strand:
+>C01_LTR-Gypsy_35
ACCCTCGGAAGAAGAAACGTACACAGCCCTTCAAAGTATCGGTTCAACCATTTTCTTTCGTAAAAAAAGGGGGTGGGGAGTAGGTACATATACTATACTCGTATACTCCCA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_36Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
322Start:
4394427End:
4394748Strand:
+>C01_LTR-Gypsy_36
TCGTACACCCGACACAAAGGTAATAACGCTATATACAAAAAATCCGAAATTTTGGTCAGCACTTTCGGGAGACTTAAAAATTGTCCTCGAAGAGATGCTCGATTCCTACTATACAAGTCACATAAGCCGAGAACATATAGCGGACTTTAAAGCGGGATGAAATCAGGTCGAAAACGATACGGGAAACGTAATTCGAAGTAGTCATCACACCACCCAAAGCCGTGATTAGACCTAGGTCTTGCCCTAAACCCAGCACACTGGTCTCTAACATCTCTACGCATAGTATCAAACACCCTGATACGAGATCCCAAAATTTGTCTCT
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_37Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
383Start:
4395214End:
4395596Strand:
+>C01_LTR-Gypsy_37
TGTTGGGGTCAAAATCGGTCACGACGGAATCAATGTCTGAAAATCTCCGTAAAATCAACATGAACGTTTTTACAAAAAGAAATCTTCGTAAAGAGATCTTTGCGAAGAACTTTGCGGTAAAATGTTGCACTAATCTCGGCTGATTCGTCGAAACTAAACACCAATAGTCCGAGAAAACGTTCATGAAAAGTCAGATAAAGATCCAGACAAGGTCGCCAAGTAGCTACCGGTCCACGAACGAGCTGGTCGCTACGTAGCGACCAACCAAGCCACTCAGTCGGTCGTTACGTTGCGACCACCAGAGAACGAGTCGGTCGCTTCGGTCGGTCGCTACCGCGAACGATCGGTCGGTCGTTACGTAGCGACCGACCCGTGACCCCCCC
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_38Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
295Start:
4396262End:
4396556Strand:
+>C01_LTR-Gypsy_38
TCGAGCTGCGACTAAACTAGGTTTAAGGTTTTAGGTTGCTAGAGCTAGGTAATTCGCCGACAGCTCTTGCGGCCGAATCTCTTATAATCTCTTGTAATGATCGCAACGCTCTTACGCGGATTCGAAATAAGATTACCTTTTCTATAAATTTGTTTTGTTATCTTTTCATATTTTCCGAATTTATTTGGTCACTTGTCGTTGGCTCTCGCAGAGAATCCGGGACCTCAGAGAAAGTTAGGGTTTCCTGAATTTCATCCGATTACGGAAATCGACGGTGTGAATTTCGGTTGTCACA
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_39Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
371Start:
4505722End:
4506092Strand:
+>C01_LTR-Gypsy_39
GCGACGAGTTCTGCTCCCGATATCGACATGGTCATCGAGGAAACGAGAAGGACCCCATTCACAAACATAATCGCCAGCGTAAGGCTCCATCACGTCGGGAAACTGAAATTCCCTGAAGACGCCGGAAACTCCGACCCGAAGGCCCATGTACGAGCCTTCCGTTTAGCAATATCAAGAGCTACCTCACCGATGACGAAAAAAGCAGGTTATTGCCGCTTCTTCGCCGAGAACCTCACCGGGGCCGCCCTCGAGTGGTTCGCAGGATTAAAAGAAAATTCAATCGACAATTTCGCCCAGTTGGTATCTAAGTTCCTCAAACAATACTCAGTCTTCATAGAGACAAGAGTTACCGAAGGAGATCTCTGAAATCT
Brassica oleracea (Capitata_V1.0)
ID:
C01_LTR-Gypsy_40Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
452Start:
4507156End:
4507607Strand:
+>C01_LTR-Gypsy_40
ATCACCTTCAACGAAACGAAACCGCAGACCTCGATAAACGACACGACGACGCTCTCGTGATACGAATCGACGTTGGTGGCTGCGAACTATCCCGGGTAATGATTGACACCGGAAGCTCGACCGATGTCCTCTTCTACGAGGCGTTTAAAAAAATGAGATTCACTAAAGCACTCCTAAAGCAAGAGCAAACTCCCCTCATCGGCTTCGCATGAGAGACCACATATTCTCTCGGATCGATCGAGCTCGCGGTAACCGCTGGAGAAATCAGAAAAATCATAGAATTCATCGTGACAGACCGTCCAGCCCCATTCAACGCAATCCTTGGGAAACCTTGGCTATACAACATGAAGGCAGTCCCCTCGACATATCACCAATGCCTGAAATTTCCAACCTCGAAAGGAGACAAAACTATCAGAGGAAGCCAGAAGAACTCCAGGATAAGCTACATCGCG