ID Class Order Superfamily Length Start End Strand View
B1_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA13035545263554655+
B1_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA15935570963557254+
B1_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA21137151853715395-
B1_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA31738142173814533+
B1_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA28638589663859251-
B1_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA10941901424190250-
B1_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA19442976854297878-
B1_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA15042990024299151+
B1_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA12743847684384894+
B1_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA9345080124508104+
B1_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA9245178354517926+
B1_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA11445569764557089+
B1_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA10646057884605893-
B1_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA17351117985111970-
B1_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA26052691005269359-
B1_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA13853991765399313+
B1_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA8354126275412709+
B1_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA16355290255529187+
B1_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA14355858775586019+
B1_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA23855948895595126-

< 2 3 4 5 6 > Total 121


Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

130

Start:

3554526  

End:

3554655

Strand:

+

>B1_SINE-tRNA_21

CATGGATCCGCCTCTGGGCGGTCCAAGTAATACAGTCAGATGTAAATCTTTATACGGCATATAGAACTGTTTGACCGTGGAATTGTCTGTAATATTTTTCATAGTTGTAATACCATAATTATACAGTGTT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

3557096  

End:

3557254

Strand:

+

>B1_SINE-tRNA_22

AACCAAGCGCTCGTAGCTTGGTGGTAAAGGAGGTACAGCTGTACTGCCCGCCACCCGGGTTCGAGTCTTGGCCACAAATTTAACATCCCTTCCGTTGGGGCGTTGGACCCTTTACAAGGGAATAGTTGGGAATGTGGCTGCCCAGATACCAGAATTACC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

211

Start:

3715185  

End:

3715395

Strand:

-

>B1_SINE-tRNA_23

ATAACCGAGTGTCCTGACCCCACCGAGGTGGTCCAAACTAGAGACCGAAGCAAGCAAGAACACTGTCAAGACGTCACTATGTGGCTCACCGTGAACGGTCTTCGGTCTCGGGCGCTGGGGTTCCGCATGTGAATTCCCCAGTGGCCAGTGCGAATCGAACCCGGGGCCGTACTTGCAGTTGCAAGCCGTTCACCACCAGACTAACACGTCC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

317

Start:

3814217  

End:

3814533

Strand:

+

>B1_SINE-tRNA_24

TGAAAACACCTAACCAACTAATTAAAGTTTAAAGGTTTCTACATACAGATCTGGGGTTCGAACCCTAGACTATAGAATTCTTGCATATTATAGAAAATTCAGAAGAGAACGGTTTATTAAACAATTATGCAGACTACGGAAAAGAAACTTACAAGAGATCTTCAACATAGTACAAGTAAATCTGGTCAAGCGTAAATCTTCATAAGACAGTTCAAGTGATGCAGTTAAGCATAGATTTTCATAGACAGAAAGTATTGTTGGATGTCGAATAATCTATGTATTCATTCTCATATTATAATTGTATTATCATAATAAAT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

286

Start:

3858966  

End:

3859251

Strand:

-

>B1_SINE-tRNA_25

AACACTGGATAATTATGCTATTACAAACTATGAGAAATATTACAGACGATTCTACAGCCGACAATTCTACCTGTCTTATGAGAATTCCCGCCTGACTGCATCACCTGAGCTGCCCTATGGATCTTCGTTTGACCGGCACTCCTTGCGCCATGCTGCAGATCTCTTGTAAGCCTTTTCTCCCTTAATTCGCATAATTCCGCTTTGTCTGGGGCTCGAAACCCAGACTTCCTGGTGTAGAAGCATTAATGAACCCTTAGTCAAACCACTGGACCAAGGGGGCTTCCAC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

109

Start:

4190142  

End:

4190250

Strand:

-

>B1_SINE-tRNA_26

CCGGAGGCCCGGAGAAACCATGTGAAAACCCCGGTGACCAACGCGGATCGAACCTGCGGAGAGCGTATTGGATTTTCTTCCTCAATTACCACTAGGCCAACCCGTGTTG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

194

Start:

4297685  

End:

4297878

Strand:

-

>B1_SINE-tRNA_27

GTGTCCTGCCTCCACATCGTGGGTCAAGACTAGCCACGTAGCAGGCTTAGAGTATTTGGTGACCTCTTTGGATCAGACCACGTGTTGGTCTCCTCCGGCCGAAGAACCCATGTGAAAGCCTCAGTGGCCAGTGCGAGTCGAACCCAAGACCGTACTTGCAGCCGTAAATCGCACACCACCAGACTAATTTATCC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

150

Start:

4299002  

End:

4299151

Strand:

+

>B1_SINE-tRNA_28

CAACATGGGTTGGCCTAGTGGTAGTTGAGGAAGAAAATCCAATACGTTCCCCGCAGGTTCGATCCGTGTTGGCCACCGGGGTTTTCACATGGTCCCTCCGGGCCTCCGGGAAGCCGCCGCTGCCGTAAAAACCCTCCGGGCCCTTAGTGG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

127

Start:

4384768  

End:

4384894

Strand:

+

>B1_SINE-tRNA_29

AACCGGGGCTTCTACCTCTAGTGGTAAAGGGCTTACAGCTGTGAATACCGCCACTTGGATTCGAATCCCGACCAGTGGAGAATTAACATTTCGGCATCGCCAGGGACATATGACGGACACGTGGCAA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

93

Start:

4508012  

End:

4508104

Strand:

+

>B1_SINE-tRNA_30

GTTTGATCACTGTTGTGACGAAACTAATATTACATATATTGTGGTTTCGGATCTGAAAGGATTACGGGCTTTGGCCTCGAACCTCCTGGTATT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

92

Start:

4517835  

End:

4517926

Strand:

+

>B1_SINE-tRNA_31

GTTTGAATGACCATTGTGATGAAACTAATATTACATGTTGTGGTTTCGGATCTGGAAGGATTTCCTCCTTCAGCCCCGAACCTCCTGGTATT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

114

Start:

4556976  

End:

4557089

Strand:

+

>B1_SINE-tRNA_32

GTTCGACTCGCGCTGGCCACCCGGGCTGCCTTAAATGGCAAGAATACGCGGAGTGCCGTGGGCCTCTTGGGATTAGTCCTTGGGCCTAGAAAGCTTTTGGGAAACCCAAGGTTA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

106

Start:

4605788  

End:

4605893

Strand:

-

>B1_SINE-tRNA_33

CCGGAGGCCGGAGGGACCATGTGAAAACCCCGGTGGCCAACGCGGATCGAACCTGCGGGGAGCGTATTGGATTTTCTTCCTCAACTACCACTAGGCCAACCCGCGT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

173

Start:

5111798  

End:

5111970

Strand:

-

>B1_SINE-tRNA_34

GATATACCTTATCGATTGATCCGATCAATTTTGGTAAAAATGTTTTAGCTCTACAGTGTGGACTTCTCTCTAAAATTTGGAATGCTTTCCATCTAATGTTAGGATATCTGGATTACCCATTATCGAACTACCATGTAAACTAATTGAACTTAAGCTCAAATCCAAATTTTCCA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

260

Start:

5269100  

End:

5269359

Strand:

-

>B1_SINE-tRNA_35

AATACTGGTTCATTATGATACTATAATATATTGCGAAGACGATTCTATAGTCGATAATGTTCTACTTGCTTTATGAGAATTTACGTTTGACTGCATTACTGTGAGCTATCCTACGAGATCCAACATACTAAAAATTTTATGTAAGTTTTTACTTATCTAATCTGTATACTTCACCTTTTTAAAAATTTGTAATTGAGACCTCTTTGTATAAAAGCATTAATAGACATTTTCTCAAATCACTGAATTAAAGGGGTTTCTAC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

138

Start:

5399176  

End:

5399313

Strand:

+

>B1_SINE-tRNA_36

CAAGAGCTCTTGGTCCAGTGGTAATGGAACTCCAGCTGGAATGCCCGTCCCTGGGTTCAAGTCGTCTTGGCCACCTTCCCGCCTATAACCGTGTGTGCCCGGATGGAGGATCTCGTGGAGATTAGTCTGGACTTACCG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

83

Start:

5412627  

End:

5412709

Strand:

+

>B1_SINE-tRNA_37

CGATTGACGTTTGAGATGAAACTAATATTAAATGTTTTGGTTTCGGGTTTGAGGAGATTAGGGGATTCGGCACTGAACATTCT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

5529025  

End:

5529187

Strand:

+

>B1_SINE-tRNA_38

TCTTGGTCTAGTGGTAAAGGAGTTCTAACTAAATTTTCAGCCCTGGGTTCGAGTAGCATTGGCCACCCATAGACGTCTTAAGTGGCAAGAAAATCTGGATTTTTATGGGCCTCGTGGGATTAATCTTTGGGCCTAAAAAGCCTTTGGGATCCCCACGGTTATC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

143

Start:

5585877  

End:

5586019

Strand:

+

>B1_SINE-tRNA_39

GTGCAGTGGACTAGTGGTTAAGCGCATGGGTCGGTTTTGTTGCGCTCCTACTTTGAGTCCCGGTAGGAAAAGTTGATTTAACATGTTCCATTGTAAGGTCAAAGACTGGCTCCGGGTCGGAAAGATATATAAAAGCCGTAGGC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

238

Start:

5594889  

End:

5595126

Strand:

-

>B1_SINE-tRNA_40

GTCTGGTTAATTATGCTATTACAAATTATGAGAAACATTACATACACGATATCACAGCCGAGAAATCTATCTATTTTATGAAGATTCACGCCTGACTGCATCACTCTGAGTCACTTTATGAGATCCATTCCTGGCGGTATTCACAGACCTTTTCCTGTAAATTGTGTTGCCTGAGATTTGAACTTCAGACCTGGGTGTAAAAGCCTTTAAACCTTGACTACTAGGACATGGTACTTCC