ID Class Order Superfamily Length Start End Strand View
B2_LTR-Ngaro_21 RetrotransposonsLTRLTR-Ngaro906512744965127538-
B3_LTR-Ngaro_22 RetrotransposonsLTRLTR-Ngaro8322106432210725-
B3_LTR-Ngaro_23 RetrotransposonsLTRLTR-Ngaro20340072024007404-
B3_LTR-Ngaro_24 RetrotransposonsLTRLTR-Ngaro25780652698065525-
B3_LTR-Ngaro_25 RetrotransposonsLTRLTR-Ngaro2322700406527004296+
B3_LTR-Ngaro_26 RetrotransposonsLTRLTR-Ngaro1044758199447582097-
B3_LTR-Ngaro_27 RetrotransposonsLTRLTR-Ngaro884908508349085170-
B4_LTR-Ngaro_28 RetrotransposonsLTRLTR-Ngaro941284295212843045-
B4_LTR-Ngaro_29 RetrotransposonsLTRLTR-Ngaro1042221555222215655-
B4_LTR-Ngaro_30 RetrotransposonsLTRLTR-Ngaro2962223116222231457+
B4_LTR-Ngaro_31 RetrotransposonsLTRLTR-Ngaro1102278012822780237+
B4_LTR-Ngaro_32 RetrotransposonsLTRLTR-Ngaro904801178348011872-
B5_LTR-Ngaro_33 RetrotransposonsLTRLTR-Ngaro26228543242854585-
B5_LTR-Ngaro_34 RetrotransposonsLTRLTR-Ngaro9090786029078691-
B5_LTR-Ngaro_35 RetrotransposonsLTRLTR-Ngaro1151070197410702088+
B5_LTR-Ngaro_36 RetrotransposonsLTRLTR-Ngaro1042618066026180763+
B6_LTR-Ngaro_37 RetrotransposonsLTRLTR-Ngaro101875123875223+
B6_LTR-Ngaro_38 RetrotransposonsLTRLTR-Ngaro1411166491311665053+
B6_LTR-Ngaro_39 RetrotransposonsLTRLTR-Ngaro1244786003147860154+
B7_LTR-Ngaro_40 RetrotransposonsLTRLTR-Ngaro19915940431594241+

< 1 2 3 > Total 3


Brassica nigra (Ni100_V1.0)

ID:

B2_LTR-Ngaro_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

65127449  

End:

65127538

Strand:

-

>B2_LTR-Ngaro_21

TAACTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

2210643  

End:

2210725

Strand:

-

>B3_LTR-Ngaro_22

AGCTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGTCTTG

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

203

Start:

4007202  

End:

4007404

Strand:

-

>B3_LTR-Ngaro_23

GTTGCTGCTGCTGAGGCGCTGACTGCTGTTGGTGTTGAGGCGCTGGCTGCTGCTGCTGCTGTTGTTGAGAAGGTGGTTGGTTTTGATGTTGTTGTTGTTGTTGTTGATGCTGTTGCTGCTGATTATGTTGCTGCTGCTGTTGTGCACGTTGCAATAAGAGTTGTTGCATTTGTATTTGCTGCTGTTGTTGTTGCTGCTGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

257

Start:

8065269  

End:

8065525

Strand:

-

>B3_LTR-Ngaro_24

TGCTGCTGCTGATGATGTTGAAGCTGTGATAACTGATGCTGCTGTTGCTGTTGCTGCTGATGATGTTGGAGTTGTGACAATTGATGTTGCTGCTGCTGTTGCTGGAGTTGTGGCAGCTGTTGCTGTTGGTGGTGTTGCTGCTGCTGGATCTGTTGTTGCTGCTGCTGCTGCTGATGAATCTGTTGTTGCTGCTGCTGCTGCTGGATTTGTTGTTGCTGCTGCTGCTGTTGTTGGTGCTGCTGCTGTTGCTGATTTGT

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

232

Start:

27004065  

End:

27004296

Strand:

+

>B3_LTR-Ngaro_25

AACAACAACATCAACAACCCCAACAACAGCATTTGCAGCAGCAACAACAGTTACAACAGCCTATGTTTAAGCCACTTCAGCAGCTAGGTCAATCCCAGCAGCATCAGCAGTTAACTCAGCCTCAGCAGCAACAGCAGCAGCTAGCTCAGTCTCACCAGCAACAGCAGCAGCTACAACAACATGAGCTGCTTCAACAGCCACAACAACAGCAGCAGCAGCAACAGTTAACAAC

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

47581994  

End:

47582097

Strand:

-

>B3_LTR-Ngaro_26

TAGCTGTAAAAGTTTAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B3_LTR-Ngaro_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

88

Start:

49085083  

End:

49085170

Strand:

-

>B3_LTR-Ngaro_27

GGAACGGGAACGGGAAACGGCTAAACTTAAAATTTATAGATACATGTACGGCATGGATACGTTTATAAATATATATATATATATATAT

Brassica nigra (Ni100_V1.0)

ID:

B4_LTR-Ngaro_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

12842952  

End:

12843045

Strand:

-

>B4_LTR-Ngaro_28

AACTCCTGTGGAGAGTTATTAACTTGAGGTTCTCAATATTAATATATATATGTATATATATAGTTATATATATTAATATACATTAATATTTAAT

Brassica nigra (Ni100_V1.0)

ID:

B4_LTR-Ngaro_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

22215552  

End:

22215655

Strand:

-

>B4_LTR-Ngaro_29

TAGCTGTAAAAGTTTAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B4_LTR-Ngaro_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

296

Start:

22231162  

End:

22231457

Strand:

+

>B4_LTR-Ngaro_30

CAGCAACATCAGCAACTCCAACAACAGCAACAAATCAAGCAGCAATATCACCAACAACAGTAGCAGCAACAACATATCCAGCAACAACAACAACAACAACAGATCCAGCAGCAGCAACACCACCACCACCAATAGCAACAGCTGCCACAACTCCAGCAGCAGCAGCATCAAATGTCATAGCTCCAACATCATCAGCAGAAACAGCAACAACAACGCTAGTTGTCGCAGCTTCAACATCATCACCAACAGCAGCAGACATCACCACTGAATCAGATGCAGCAGCAGCAGCCTTAACA

Brassica nigra (Ni100_V1.0)

ID:

B4_LTR-Ngaro_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

110

Start:

22780128  

End:

22780237

Strand:

+

>B4_LTR-Ngaro_31

ACCCCACACTTACATACACATATATATAATATACATGCATATACATTCATATATATTAGTGTATAAAACTCCAATGGATAGATACTCCTGTTGGAGGTGTTCTTAGGGCA

Brassica nigra (Ni100_V1.0)

ID:

B4_LTR-Ngaro_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

48011783  

End:

48011872

Strand:

-

>B4_LTR-Ngaro_32

TAGCTGTAGGTAAATTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B5_LTR-Ngaro_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

262

Start:

2854324  

End:

2854585

Strand:

-

>B5_LTR-Ngaro_33

GTGGCTGCTGTTGCTGCTGCTGTGGTGTTGGCTGCTGCTGGTGTTGAGGCGCTGGCTGCTGCGGCTGCTGCTGCTGTTGCTGCTGAGAAGGTGGTTGGTTTTGATGTTGTTGTTGGTGTTGCTGCTGCTGTTGTTGATGATGTTGCTGTTGTTGTTGTTGCTGCTGTTGTGCACGTTGCAGCAACATTTGTTGCATTTGTATTTGCTGTTGCTGTTGTTGCTGCTGTGAGACCTGTGGGTGTTGAGATTGTTGCATTTGCTG

Brassica nigra (Ni100_V1.0)

ID:

B5_LTR-Ngaro_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

9078602  

End:

9078691

Strand:

-

>B5_LTR-Ngaro_34

TAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTATTACTGTAGATTTTATTGCAGAGACTTTTGTTATAGCTAAATTTGTTGTAGCTGT

Brassica nigra (Ni100_V1.0)

ID:

B5_LTR-Ngaro_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

115

Start:

10701974  

End:

10702088

Strand:

+

>B5_LTR-Ngaro_35

AACAGCAGAGACGGCAGTGGTGGAACAACGGTCACAGTAGTAGCTTCAACAACAGTGACAATAGTAGCTTTAACAACAGTCATAATAATCGGCAATGGCAATACAGTAGTAGCCA

Brassica nigra (Ni100_V1.0)

ID:

B5_LTR-Ngaro_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

26180660  

End:

26180763

Strand:

+

>B5_LTR-Ngaro_36

TATGTATTAGTACATGATCAAATGGGTTTCAATATATATTTTGTTTGTTTGTATGGGTGTGTATATGTGTACGAGTGTGTGTGTGTGTGTGAGTGTATACATAT

Brassica nigra (Ni100_V1.0)

ID:

B6_LTR-Ngaro_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

101

Start:

875123  

End:

875223

Strand:

+

>B6_LTR-Ngaro_37

TGGCCCAATGGATAAGGCGCTGGTCTACGAAACCAGAGACTCTGGGTTCGATCCCCAGTGGAGTCGGTTAATCTTTCTTTTTTATTCTATAAAATGCATAA

Brassica nigra (Ni100_V1.0)

ID:

B6_LTR-Ngaro_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

141

Start:

11664913  

End:

11665053

Strand:

+

>B6_LTR-Ngaro_38

ACAGCAGCTCCAGCAGCTGCAGCTTCATTCACAGAAACAACAACAGCATCAACAACAACAACAACAGCAGCAGTTTCAGTTTCAACAGCAACAGATACAACAGCTTCTGCATCAGCGTCTTCGACAGCAGGAACAACAAAA

Brassica nigra (Ni100_V1.0)

ID:

B6_LTR-Ngaro_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

124

Start:

47860031  

End:

47860154

Strand:

+

>B6_LTR-Ngaro_39

ACAACAGTTCCAGCAGCTCCAAATCCATTCACAGAAACAACAACAGCAGCAATTTCAGTTTCAGCAGCAGCAACTGTATCAGCTTCAGCTTCAGCAGCAGCGGATTCAACAGCAGGAACAACAA

Brassica nigra (Ni100_V1.0)

ID:

B7_LTR-Ngaro_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

199

Start:

1594043  

End:

1594241

Strand:

+

>B7_LTR-Ngaro_40

CATCTATTCCTCCAGCAGCAACAACAACAACAGCCACAGTTTCATCATCAACAACAACAACAGACGCAGCAGCAACAGTTCCAGCCACAGCAACAACAACAACAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGTTCATTCAACAACAGCAGTTCCATCACCAGCAGCACCGTCTCTTACATTCTCCTC