TBGR-Browse-Bna-LTR.LTR-Ngaro

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffoldC05_LTR-Ngaro_41	Retrotransposons	LTR	LTR-Ngaro	308	46301307	46301614	+
scaffoldC06_LTR-Ngaro_42	Retrotransposons	LTR	LTR-Ngaro	102	8273595	8273696	+
scaffoldC06_LTR-Ngaro_43	Retrotransposons	LTR	LTR-Ngaro	92	26627170	26627261	-
scaffoldC06_LTR-Ngaro_44	Retrotransposons	LTR	LTR-Ngaro	203	48460582	48460784	+
scaffoldC07_LTR-Ngaro_45	Retrotransposons	LTR	LTR-Ngaro	105	39438301	39438405	+
scaffoldC07_LTR-Ngaro_46	Retrotransposons	LTR	LTR-Ngaro	87	40543013	40543099	-
scaffoldC07_LTR-Ngaro_47	Retrotransposons	LTR	LTR-Ngaro	117	48981646	48981762	+
scaffoldC07_LTR-Ngaro_48	Retrotransposons	LTR	LTR-Ngaro	236	58633829	58634064	+
scaffoldC09_LTR-Ngaro_49	Retrotransposons	LTR	LTR-Ngaro	111	1861401	1861511	+
scaffoldC09_LTR-Ngaro_50	Retrotransposons	LTR	LTR-Ngaro	113	4703872	4703984	+
scaffoldC09_LTR-Ngaro_51	Retrotransposons	LTR	LTR-Ngaro	82	15453499	15453580	+
scaffoldC09_LTR-Ngaro_52	Retrotransposons	LTR	LTR-Ngaro	277	57128364	57128640	+
scaffoldC09_LTR-Ngaro_53	Retrotransposons	LTR	LTR-Ngaro	114	60064913	60065026	+

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_LTR-Ngaro_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

308

Start:

46301307

End:

46301614

Strand:

+

>scaffoldC05_LTR-Ngaro_41

CACCACCTTCTTCAGACTCACAACCTCCACCATCACAACAACAAGGAAACAACAACAATGGTGGAAACAATGATAACAACAACAAGAATGGTAATAACAACAATGGTGGAAACAATGACAACAACAACAACAATGGCAATAACAACAATGGTGGAAACAATGACAACAACAACAGCAATGGTAATAACAACAATGATGGCAATAATGGTAACAAAAACAATGGCAACAATGGTAATAACAACAAGGGGAATAACAATGACAACAACAACAACAACAAGGGGAATAATAATAGCAACAAAAACAATAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC06_LTR-Ngaro_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

102

Start:

8273595

End:

8273696

Strand:

+

>scaffoldC06_LTR-Ngaro_42

CAGTCATCCTATTATTTAGTAAAAACATACAGCTCCTGCAGCATACTCCTTTTGTAGCATAATGCTACTGCTATTGCTAATGCTACTGTTATTGCTAATGCT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC06_LTR-Ngaro_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

92

Start:

26627170

End:

26627261

Strand:

-

>scaffoldC06_LTR-Ngaro_43

AGCATTAGCATTAGCAGTAGTAGTATGCTATAGAAGCAGTATGCTGCAGTAGCAGTATGCTATATAAGCAGTATGCTGCAGGAGCTGTATGC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC06_LTR-Ngaro_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

203

Start:

48460582

End:

48460784

Strand:

+

>scaffoldC06_LTR-Ngaro_44

CAACAGCAACTCCAGCAGCAGCAGCAACAACCCCAACAACAACAGTTCCAGCAGCAACCACAGTTACAGCAGCTAGCTCAGTCCCAACCACTTCAGCAGCTAGCTCAGCCTCAGCAGCAACAGCAGTTAGTTCAGTCTCAGCAGCAACAGCAGCAGCTACAACAACATGAGCTGCCTCAACAGCCACAACAGCAGCAGCAACA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC07_LTR-Ngaro_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

105

Start:

39438301

End:

39438405

Strand:

+

>scaffoldC07_LTR-Ngaro_45

CAGCAACAACAACAACAAGAGTGGTTTCAACAGCAGCAACAATGGCAACAACAACAGCAACAGCAACAGTATCATCTCTATATTCAACAACAACAACAGTTGCAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC07_LTR-Ngaro_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

87

Start:

40543013

End:

40543099

Strand:

-

>scaffoldC07_LTR-Ngaro_46

CCCGGTCAAGACCCGCTAAGCCCGTAAATATTTGAGCCCAGTCTGGCCCGGTCCAAAAATATTTTGGGTCTAGAATTCAAAGTCCGG

Brassica napus (ZS11_V2.0)

ID:

scaffoldC07_LTR-Ngaro_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

117

Start:

48981646

End:

48981762

Strand:

+

>scaffoldC07_LTR-Ngaro_47

TACATACATGCGTCCATTTTTTTGCATACATATATGCATATTGATTGAGAGCTTATATATATATATATGTGTGTGTGTGTGTGTGTGTTTGTGTCAGTGTGTGTAACATATGCATGG

Brassica napus (ZS11_V2.0)

ID:

scaffoldC07_LTR-Ngaro_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

236

Start:

58633829

End:

58634064

Strand:

+

>scaffoldC07_LTR-Ngaro_48

CGAGAACAGCAAATGCAGCAATCTCAACACCCACAGGTCTCACAGCAGCAACAACAACAACAGCAGCAGCAAATACAGATGCAACAACTCTTGTTACAACGTGCCCAACAACAGCAGCAGCAACAACATCATCAGCAACAACAACAACATCAAAACCAACCGCCTTCTCAACAGCAGCAGCCAGCTCCTCAACACCAACAGCAGTCGGCACCACAGCAGCAGCAGCAGCAGCCACA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC09_LTR-Ngaro_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

1861401

End:

1861511

Strand:

+

>scaffoldC09_LTR-Ngaro_49

CTGCTACAGTGCTACTGCTATTGCTAATTGTTATTGCTAATGCTCTACCAATCATACTGCTACAGTGCTACTGCTATTGCTAATTGCTATTGCTAATGCTCTACCAATCAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC09_LTR-Ngaro_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

113

Start:

4703872

End:

4703984

Strand:

+

>scaffoldC09_LTR-Ngaro_50

TTTTAATATTTATATATACACATTTATATATGTACATATATATATATATAGACGAATCTATGCCGTACCCGTATCTATAAATTTAAGATTTAGCCGTTTCCCGTCCCCGCCCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC09_LTR-Ngaro_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

82

Start:

15453499

End:

15453580

Strand:

+

>scaffoldC09_LTR-Ngaro_51

GCATACAGCTCCTGCAGCATACTGGTTCTATAGCATACTGCTACTATAGCATACTACTACTACTAATGCTAATGCTCTACCA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC09_LTR-Ngaro_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

277

Start:

57128364

End:

57128640

Strand:

+

>scaffoldC09_LTR-Ngaro_52

ACAACAACCACAATCACTGCATCAGCAGCAACAACAACAATCACTGCTGCTTCAGCAGCAGCAACAACAATCGCTGCAGCAACACCATCAACAACAGCTTCAGCAACACCATCAACAACCGCTACAGCAACAGACTCAGCAGCAGCAGCTACAACAACAGCAGCAGTTAAGAACGCAGCAACTGCAATCTCATACGCACCCACAGTCGCAGCAATCTCCTACGCACCCACAGTCACAGTCACATCCACAACAGCTACAGCCACATAAGCTGCAGCAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC09_LTR-Ngaro_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

114

Start:

60064913

End:

60065026

Strand:

+

>scaffoldC09_LTR-Ngaro_53

CAGCAGCAGCAGCAGCAACAACAACAACAGCAGCTTCTCTACCAACATCAATTACAACAGAGACAGCAGCAGATGCTTCTCTTACAGCAGTTGCAGAAACAGCAACAACAACAA