TBGR-Browse-Bna-LTR.LTR-Copia

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffold0025_LTR-Copia_81	Retrotransposons	LTR	LTR-Copia	313	1068127	1068439	+
scaffold0025_LTR-Copia_82	Retrotransposons	LTR	LTR-Copia	543	1070179	1070721	+
scaffold0025_LTR-Copia_83	Retrotransposons	LTR	LTR-Copia	227	1071100	1071326	+
scaffold0025_LTR-Copia_84	Retrotransposons	LTR	LTR-Copia	730	1071678	1072407	+
scaffold0025_LTR-Copia_85	Retrotransposons	LTR	LTR-Copia	184	1072875	1073058	+
scaffold0025_LTR-Copia_86	Retrotransposons	LTR	LTR-Copia	172	1074127	1074298	+
scaffold0025_LTR-Copia_87	Retrotransposons	LTR	LTR-Copia	310	1074299	1074608	+
scaffold0025_LTR-Copia_88	Retrotransposons	LTR	LTR-Copia	108	1166162	1166269	+
scaffold0025_LTR-Copia_89	Retrotransposons	LTR	LTR-Copia	175	1166306	1166480	+
scaffold0025_LTR-Copia_90	Retrotransposons	LTR	LTR-Copia	545	1168235	1168779	+
scaffold0025_LTR-Copia_91	Retrotransposons	LTR	LTR-Copia	228	1169162	1169389	+
scaffold0025_LTR-Copia_92	Retrotransposons	LTR	LTR-Copia	717	1169743	1170459	+
scaffold0025_LTR-Copia_93	Retrotransposons	LTR	LTR-Copia	167	1170932	1171098	+
scaffold0025_LTR-Copia_94	Retrotransposons	LTR	LTR-Copia	171	1172143	1172313	+
scaffold0025_LTR-Copia_95	Retrotransposons	LTR	LTR-Copia	108	1172314	1172421	+
scaffold0025_LTR-Copia_96	Retrotransposons	LTR	LTR-Copia	175	1172458	1172632	+
scaffold0025_LTR-Copia_97	Retrotransposons	LTR	LTR-Copia	108	1358963	1359070	+
scaffold0025_LTR-Copia_98	Retrotransposons	LTR	LTR-Copia	175	1359107	1359281	+
scaffold0025_LTR-Copia_99	Retrotransposons	LTR	LTR-Copia	233	1360034	1360266	+
scaffold0025_LTR-Copia_100	Retrotransposons	LTR	LTR-Copia	507	1360769	1361275	+

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

313

Start:

1068127

End:

1068439

Strand:

+

>scaffold0025_LTR-Copia_81

TGTTATAAAACATGTGTGGATTGCCATTAACCAAGACAAGAAGAGAAGAAGGCCCAACGGCCATGACCAGGCCCGACCGCGGCCGTGTCCAAGAGGAGAGAGAGAGAGCCGACTTCAGGAAAGAGAGAGGCGGCCACAAGCTTAGGAGAAAAGGAAAACCTATTTCCTTTTCCATATAGATGTTATCTTTCCTTTTATGTATTTAGTAGATTTCCTATTTCATGTAGGATTAGGATAAGTACTCTTTCCATTTATCTCTATCTTGTAATCCTTATATAAGGAACCCCCTTTATGATTAATAATACACACACAA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

543

Start:

1070179

End:

1070721

Strand:

+

>scaffold0025_LTR-Copia_82

CACGATGATCGATTGTTTTCATAGATGCGTAAGGACTTGTTTGTGGCCGAGCTTGTTAATATCATGCGGCTACATGACAACATTGTGAACCTAAATATTAAATGACAATGTGACTTAGATATCGAAAAGGGACTTGGTGATACAATCACCAAGGACAACAATGAGAATGAATTGGTACAATATTCCATCATCTCATTGAAGGTCTAAAAGATCAGTACATCATTATGGAAAATCCACTAGACTTTGGGTATGCTTCACAGCATAGAAATTACCACCATAAAACGGTGTTGCTTCCAAAGGCTAGAAATGACTAGAAGAATCTAAGATTCTTGGATTACAAAGTCATGGATGAGTACAACTCAGTCTTGTTTAAGACAGTCTCGGTGCTGAGACTTTGTGGTGAAATAGTAACCAAGAAAGAGTTACTAGAGAAGACCTATTCCACATTCCATGTGTTAATGTCATACTGCAACAACAGTATAGAATAAAAGGCTTCACCACTTATACTGACCTAATCGCATGACTGCTTCTGGCAGAGACCAA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

227

Start:

1071100

End:

1071326

Strand:

+

>scaffold0025_LTR-Copia_83

CTATACCAATGACCCCTACTGATTTAAAACTATGCTACAAAGATCAGTATGATAAGAGGCAAGAGAGGTGGTGACTATAAAGACATAGCCCACGAAATTATACACTATATGGCAAGATAGGATTAGCCATCCTAAAGTTAAACTTGATGCAAAGAAATTGAAAAGGCACAAAGTTATCCCGTAAAGATCTCACGTTGTGAAACATGTACACATAGGGAAACTTATTA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

730

Start:

1071678

End:

1072407

Strand:

+

>scaffold0025_LTR-Copia_84

GTTCGGCCATTACCTATAAAAGATTCGGCCATTACCTATATGCTTGGGGACATAATGAATTTACATGTATAGAATGATAAATAAGATCATATGCATCAGGCCATATAAGTGAGCATAGATATTCCCATCTAAAGAATGAATACGGGTCATTAAAACCAGACATACCATCTTAAGAGACTTGAAATAAACCACCACATACATATATGTGCCGTCTAAGATGGAACCTCAGAAGAGGATTGGGAATATATGTTGGATAGGAGTATTACTTTCTCCCACGAATTCAAAGAAAGCTTGAGCCAAAACATGGGTGATTAAAATAGTGGCCAGGTACGGATTGCATGATCAAATGAATCCGACTATCCAAACATTAAAGGAGAAAGATTATAAGCTGGATAAAGAAAGAGTAAAGGAATGATAAGAATGGTTTTAACCATCATTGTCTTGGCAAGATCCTCGGACCAGAGAATATGATATAAGACGTCCAAAGAAAGATGATATAAAGACAGCTAATTGATAAGCTAATCGAGATGCCAGACACTGACCCGAAAAGAATGAATATGTCATAACCAGCTTAGCACCAAATGAAACGTCCTAGAAGAGACATAATCAAGTTGCTATAGAGTCTATACAAGATAGACTAAGTGTTCCATAAGAGAAAGGAAACTCGGATAGAAAGAAAAGGTGCATAGAATGATAAGATCCGAAGTTATAAGAGAAACCATACAGACAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

184

Start:

1072875

End:

1073058

Strand:

+

>scaffold0025_LTR-Copia_85

CATAGCTTGCACAAGGTACTCACAAAGATCAAAGGAACAGATTATAAGGAGATGAACTCCTATGTGGTGATTGCTGCTACAGATTTTCGATATTAAACCAAGTCTGGTCATAAGAAAGAAATAGATACAATACTGATGTAGTAAGCAGCATATGGATCACTGGATAAGATAAATAAAATGAAAG

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

172

Start:

1074127

End:

1074298

Strand:

+

>scaffold0025_LTR-Copia_86

GATGCGTAGTATGTAGAACCTACACCGAGGTTCACATCAGGGGGAGTAGTGCGTGTTGTACTCTTTTTCCTTCATCATGGTTTTGTCCCACTGGGTTTTCCTGATAAGGTTTTAATGAGGCAACATTAAAGCGTACTACAAATCCTGTATGGTTATGGCATCCAAGGGGGAG

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

310

Start:

1074299

End:

1074608

Strand:

+

>scaffold0025_LTR-Copia_87

TGTTATAAAACATGTGTGGATTGCCATTAACCAAGACAAGAAGAGAAGAAGGCCCAACGGCCATGACCAGGCCCGACCGCGGCCGTGTCCAAGAGGAGAGAGAGAGAGCCGACTTCAGGAAGAGAGAGGCGGCCACAAGCTTAGGAGAAAAGGAAACCCTTTCCTTTTCCATATAGATGTTATCTTTCCTTTATGTATTTAGTAGATTTCCTATTTCATGTAGGATTAGGATAAGTACTCTTTCCATTTATCTCTATCTTGTAATCCTTATATAAGGAACCCCCTTTGTTGATTAATAATACACACACGA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

108

Start:

1166162

End:

1166269

Strand:

+

>scaffold0025_LTR-Copia_88

TGTTATAAAACATGTGTGGATTGCCATTAACCAAGACAAGAAGAGAAGGCCCATCAGGCCACGACCAGGCCCAGCCATGGCCACGTCCAAGAGAGAGAGAGTCGGTCA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

175

Start:

1166306

End:

1166480

Strand:

+

>scaffold0025_LTR-Copia_89

CAAGGAGGAGAGAGAGTCGGCCAAAGCATTGGCCAACTTAGGATATAGATAGTTTCCTTTTCCATGTATTAGTAGATTTCCTATTTCATGTAGGATTAGGATAAGTACTCTTTCCATTTATCTCTATCTTGTAATCCTTATATAAGGAACCCCCTTTGTTCATTAATAATATACA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

545

Start:

1168235

End:

1168779

Strand:

+

>scaffold0025_LTR-Copia_90

CACGATGATCGATTGTTTTCATAGATGCGTAAGGACTTGTTTGTGGCCGAGCTTGTTAAATATCATGCGGCTACATGACAACATTGTGAACCTAAATATTAAATGACAATGTGACTTAGATATCGAAAAGGGACTTGGTGATACAATCACCAAGGACAACAATGAGAATGAATTGGTACAATATTCCATCATCTCATTGAAGGTCTAAAAGATCAGTACATCATTATGGAAAATCCACTAGACTTTGGGTATGCTTCACAGCATAGAAATTACCACCATAAAACGGTGTTGCTTCCAAAGGCTAGAAATGACTAGAAGAATCTAAGATTCTTGGATTACAAAGTCATGGATGAGTACAACTCAGTCTTGTTTAAGACAGTCTCGGTGCTGAGACTTTGTGGTGAAATAGTAACCAAGAAAGAGTTACTAGAGAAGTCCTATTCCACATTCCATGTGTCGAAAGTCATACTGTAACAACAGTATAGAATAAAAGGCTTCGCCACTTATACTAACCTGATCGCATGACTGCTTCTAGCAGAGACCAA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

228

Start:

1169162

End:

1169389

Strand:

+

>scaffold0025_LTR-Copia_91

CTATACCAATGATCCCTACTGATTTAAAACTATGCTACAAAGATCAGTATGATAAGAGGCAAGAGAGGTGGTGACTATAAAGACATAGCCCACGAAATTATACACTATATGGCAAGATAGGATTAGCCTTCCTAAAGTTTAAACTTGATGCAAAGAAATTGAAAAGGCACAAAGTTATCCCGTAAAGATCTCACGTTGTGAAACATGTACACATAGGGAAACTTATTA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

717

Start:

1169743

End:

1170459

Strand:

+

>scaffold0025_LTR-Copia_92

GGCCATTACCTATAAGAGGTTCGGCCATTACCTATATGCTTGGGGACATTATGAATATACATGTACAGAATGATAATATGTATCAGGCCATATAAGTGAGCATAGATATTCCCATCTAAAGAATGAATACGGGTCATTAAAACCAGACATACCATCTTAAGAGATTTTGAAATAAACCACCACATACATATGTGTGCCGTCTAAGATGGAACCTCAGAAGAGGATTGGGAATATATGTTGGATAGGAGTAATACTTTCTCCCACGAATTCAAAGAAAGCTTGAGCTAAAACATGGGTGATTAAAATAGTGGCCAGGTACGGATTGCATGATCAAAAGAATCCGACTATCCAAACATTAAAGGAGAAAGATTATAAGCTGGATAAAGAAAGAGTAAAGGAATGATAAGAATGGTTTTAACCATCATTGTCTTGGCAAGATCCTCGGACTAGAAAATATGATATAAGACGTCCAAAGTAAGATAATATAAAGATAGCCAATTGAGAAGCTAATCAAGATGCCAGACACTGACCCGAAAAGAATGATTAAGTCATAACCAGCTTAGCACCAAATGAAACGTCCTAGAAGAGACATAATCAAGTTGCTATAAGAGTCTATACAAGATAGACCAAGTGTTCCATAAGATAAAGGAAACTCGGATAGAAAGGAAAGGTGCATAGACAGATCCGAGTTCATGATAAGAGAAACCATACAGACAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

167

Start:

1170932

End:

1171098

Strand:

+

>scaffold0025_LTR-Copia_93

CATAGCTTGCACAAGGTACTCACAAAGATCAAAGGAACAGATTATAAGGAGATGAACTCCTATGTGGTGATTGCTGCTACAGATTTTCGATATTAAACCAAGTCTGGTCATAAGAAAGAAATAGATACAATACTGATGTAGTAAGCAGCATATGGATCACTGGATAA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

171

Start:

1172143

End:

1172313

Strand:

+

>scaffold0025_LTR-Copia_94

GATGCGTAGTATGTAGAACCTACACCGAGGTTCACATCAGGGGGAGTAGTGCGTGTTGTACTCTTTTTCCTTCATCATGGTTTTGTCCCACTGGGTTTTCCTGATAAGGTTTTAATGAGGCAACATGAAGCGTACTACAAATCCTGTATGGTTATGGCATCCAAGGGGGAG

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

108

Start:

1172314

End:

1172421

Strand:

+

>scaffold0025_LTR-Copia_95

TGTTATAAAACATGTGTGGATTGCCATTAACCAAGACAAGAAGAGAAGGCCCATCAGGCCACGACCAGGCCCAGCCATGGCCACGTCCAAGAGAGAGAGAGTCGGTCA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

175

Start:

1172458

End:

1172632

Strand:

+

>scaffold0025_LTR-Copia_96

CAAGGAGGAGAGAGAGTCGGCCAAAGCATTGGCCAACTTAGGATATAGATAGTTTCCTTTTCCATGTATTAGTAGATTTCCTATTTCATGTAGGATTAGGATAAGTACTCTTTCCATTTATCTCTATCTTGTAATCCTTATATAAGGAACCCCCTTTGTTCATTAATAATATACA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

108

Start:

1358963

End:

1359070

Strand:

+

>scaffold0025_LTR-Copia_97

TGTTATAAAACATGTGTGGATTGCCATTAACCAAGACAAGAAGAGAAGGCCCATCAGGCCACGACCAGGCCCAGCCATGGCCACGTCCAAGAGAGAGAGAGTCGGTCA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

175

Start:

1359107

End:

1359281

Strand:

+

>scaffold0025_LTR-Copia_98

CAAGGAGGAGAGAGAGTCGGCCAAAGCATTGGCCAACTTAGGATATAGATAGTTTCCTTTTCCATGTATTAGTAGATTTCCTATTTCATGTAGGATTAGGATAAGTACTCTTTCCATTTATCTCTATCTTGTAATCCTTATATAAGGAACCCCCTTTGTTCATTAATAATACACA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

233

Start:

1360034

End:

1360266

Strand:

+

>scaffold0025_LTR-Copia_99

ACTAGATTGAAATCGATTCCAACTAGAACATGTTTGATTGTTTTATTGTTTCTGATTTAAATCTGGAATCAAAACCCTAAACCTTAAAAGCTAGAATCTGACTTTAAAAGTGATCTTGCTTGATTGATCGAGGTTTAGGATTGATAGATTGATTGATAGATCTAATCTCTAAATTCGAAATCCTTAAAGGCCTTGAAACCCTTAATCGGTTACTTGAAAGTTTTAAAACCCTA

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_LTR-Copia_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

507

Start:

1360769

End:

1361275

Strand:

+

>scaffold0025_LTR-Copia_100

CACCATGATCGATTATTTTCATAGATGCGTAAGAACTTGTTTGTGGCCGAGCTTGCTATATCATGCGGCTGCATGACCACATTATGAACCTAAATTTTAAATAACAATGTGACTCAGATATCGAAAAGGGACTTGGTGATATAATCACCAAGGACAACAATGAGAATGAATTGGTACATGATTCCATCATCTCATTGAAGGTCTAAAAGATCAGTACATCATTATGGAAAATCCACTAGACTTTGGGTATGCTTCACAGCATAGAAATTACCACCATAAAACGGTGTTGCTTCCAAAGGCTAGAAATGACTAGAAGAATCTAAGATTCTTGGATTACAAAGTCATGGATGAGTACAACTCAGTCTTGTTTAAGACAGTCTCAATGCTGAGACTTTGTGGTGAAGTAGTAACCAAGAAAGAGTTACTAGAGAAGACCTATTCCACATTCCATGTGTTGAATGTCATACTACAACAGTATAAAAGGCTTCGCCACTTATACTGATCTAA