ID Class Order Superfamily Length Start End Strand View
A01_LTR-Gypsy_81 RetrotransposonsLTRLTR-Gypsy1821643033916430520+
A01_LTR-Gypsy_82 RetrotransposonsLTRLTR-Gypsy1381643131516431452+
A01_LTR-Gypsy_83 RetrotransposonsLTRLTR-Gypsy7001717926917179968+
A01_LTR-Gypsy_84 RetrotransposonsLTRLTR-Gypsy1481718064917180796+
A01_LTR-Gypsy_85 RetrotransposonsLTRLTR-Gypsy1291752819717528325-
A01_LTR-Gypsy_86 RetrotransposonsLTRLTR-Gypsy1061752830217528407-
A01_LTR-Gypsy_87 RetrotransposonsLTRLTR-Gypsy2841759880817599091-
A01_LTR-Gypsy_88 RetrotransposonsLTRLTR-Gypsy1291759958717599715-
A01_LTR-Gypsy_89 RetrotransposonsLTRLTR-Gypsy2431760246117602703-
A01_LTR-Gypsy_90 RetrotransposonsLTRLTR-Gypsy6561760387517604530-
A01_LTR-Gypsy_91 RetrotransposonsLTRLTR-Gypsy9701783488117835850+
A01_LTR-Gypsy_92 RetrotransposonsLTRLTR-Gypsy1291793626617936394-
A01_LTR-Gypsy_93 RetrotransposonsLTRLTR-Gypsy1151797461317974727-
A01_LTR-Gypsy_94 RetrotransposonsLTRLTR-Gypsy2541797497017975223-
A01_LTR-Gypsy_95 RetrotransposonsLTRLTR-Gypsy871803314818033234-
A01_LTR-Gypsy_96 RetrotransposonsLTRLTR-Gypsy1491803331818033466-
A01_LTR-Gypsy_97 RetrotransposonsLTRLTR-Gypsy2601806536918065628-
A01_LTR-Gypsy_98 RetrotransposonsLTRLTR-Gypsy1091809315918093267-
A01_LTR-Gypsy_99 RetrotransposonsLTRLTR-Gypsy892003917420039262+
A01_LTR-Gypsy_100 RetrotransposonsLTRLTR-Gypsy992004123420041332+

< 5 6 7 8 9 > Total 2534


Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

182

Start:

16430339  

End:

16430520

Strand:

+

>A01_LTR-Gypsy_81

TGTTGGTGCTGCCTGATTTCTCCAAACCTTTTACAGTTGAAACTGATGCGTCAGGAATGGGAATTGGAGCAGTGCTGTCTCAAGGCGACAAACCGATAGCTTTCATAAGCAAGGCGTTTTCTAGCAGAGGGAGAGTGAAGTCTGTCTATGAAAGAGAGTTGCTGGCTATCGTGTTTGCAGTA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

138

Start:

16431315  

End:

16431452

Strand:

+

>A01_LTR-Gypsy_82

TCATGGTTTCCCGGAAACGATGGTATCTGATCGAGACAAGGTCTTTTCGAGCCACTTCAGGTCTGCATTGTTCAAGAGTCAGGGCACGGCTCTTCACAAGAGTACCGCTTACCACCCTCAGTCCGATGGTCAGATAGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

700

Start:

17179269  

End:

17179968

Strand:

+

>A01_LTR-Gypsy_83

TGGACGAGCTCGGCGGTTCACGTGTGTACTCAAAGATTGATCTGAGAGCAGGCTATCATCAAGTCAGAATGGAGGAGAGTGACATTCATAAAACGGCTTTCAGAACACACAGTGGTCATTTTGAGTATTTGGTAATGCCCTTTGGCTTAACCAATCCACCAGCAACGTTTCAAGGCTTAATGAATCATGTTTTCAGTGAGTTCCTCAGAAAATTTGTGCTGATCTTCTTCGATGACATATTGATCTATAGCTCATCTAAGGAAGAACATGAATTACATTTGGAGGAAGTTTTTAAACTGATGAGAGCTAACAAGTTATATGCTAAAAGGAGTAAATGTGAGTTTGCTACGGATCGTGTAGAATACCTTGGCCATTTCATTCAGGCAAGCGGAGTCTCTATTGATCCACACAAGGTTAAGGCAGTGGAGGAGTGGCCTCAACCGAAATCAGTGAAAATTCTTAGAGGGTTTTTGGGTTTAGCGGGGTACTACAGACGCTTTATGAAGGATTTTGGTATCATTGCTCGACCCTTGACTGCACTAATGAAGAAAGATGGATATGAATGGAATGGGGAAGCACAAGTAGCATTTGAAGAACTGAAGAAAACGCTATGTAATGCTCCTGTTCTAGCTTTACCTCAGTTTGATAAGCCTTTTGTAGTTGAGATAGATGCTTGTGGCAACGGTATTGGTGCAGTACT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

148

Start:

17180649  

End:

17180796

Strand:

+

>A01_LTR-Gypsy_84

CATCACCGGGTCTCTTACAACCATTGCCTATTCCAGAGGCTGTGTGGGTGGATATATCAATGGATTTCATCGATGGTTTACCGGTTTCTTATGGGAAGTCGGTCATCTTTGTCGTCGTTGATAGATTGAGCAAAGCAGCTCACTTCAT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

129

Start:

17528197  

End:

17528325

Strand:

-

>A01_LTR-Gypsy_85

TGTAGGCAAACTCGGCTAGAGGTAGATACTTCTCCCAACTACCTTCCCAATCTAAAACACAAGCTCTAAGCATATCCTCCAAAGTCTGAATTGTCCTCTCTGACTGACCATCTGTCTGCGGGTGATACG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

106

Start:

17528302  

End:

17528407

Strand:

-

>A01_LTR-Gypsy_86

GACCATCTGTCTGCGGGTGATACGCCGTACTCATATGAACCTTTGTCCCAAGCGCCTTCTGGAAGGCTCTCCAAAACTCAGACGTGAACTTTGTATCCCGATCCGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

284

Start:

17598808  

End:

17599091

Strand:

-

>A01_LTR-Gypsy_87

TCAAACTCTTGGAGTAGTAGAATCCAGCGTATGAGTCGAGGTTTAGCATCTTTATTTTGCATTAAATATTTGATGGCAGCGTGATCAGTGTGAACTATCACTCGTGAGCCAATCAAGTATTGACGGAATTTTTCAAAAGCGTAAACTACAGCTAATAGTTCCTTTTCTGTTGTTGTGTAATTCCGTTGCACTTCATCAAGCGTGCGGCTGGCGTAGTAAATGGCATGTAGCTTTTTGTCTTTCCTTTGGCCTAAAACTGCTCCAATTGTGAAATCGCTCGCATC

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

129

Start:

17599587  

End:

17599715

Strand:

-

>A01_LTR-Gypsy_88

ACGTTGGAAAGTAGCGGGGGCGTTACATAGACAAAATGGCATTCTGCGATATGCGAAAGTTCCATAGGGGCATGTAAACGTTGTCTTTTCTTGATCATCCGGGTGTATAGGAATTTGGAAAAATCTGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

243

Start:

17602461  

End:

17602703

Strand:

-

>A01_LTR-Gypsy_89

TGTAAGCAAATTCCACCAGAGGTAGATGTTTCTCCCAGGAATCACCCCAGTCTAAAACACATGCTCGCAACATATCTTCTAACGTCTGGATCGTACGTTCCGACTGTCCATCAGTCTGTGGGTGATAGGCGGTACTCATGTTCACTCTTGTTCCTAAAGCTTTTTGGAAAGCTTTCCAGAAATAAGATGTAAACCTTGAATCCCTATCCGACACTATACTTCCCAGCACACCATGTAGTCGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

656

Start:

17603875  

End:

17604530

Strand:

-

>A01_LTR-Gypsy_90

GCCAGCCCTAGGAAGCTTCTGACTTCCGTGGCACTGCATGGTCGAGGCCAATCCTTGATTGCCCTGATCTTCTCTGGATCCACCGAGACGCCCAGGCCGGACACAATATGGTCGAGAAACCCAATGCTCTTCTGCTGAAAACTGCATTTACTGAGTTTAGCTTAGAGCTTGTGTTCCTGTAATCGTTCCAGCACGGCTCTCAAGTGTTTCCGATGAGATTCCTCATCCTTGGAGTAAATTAGGATATCATCAATAAAGATGATCACTGATTCATCCAGGAAGTCTCAGAACACGCTGTTCATCATTTTCATGAATGCAGCAGGCACATTGGTCAGACCGAATGGCATAACCACAAACTCGTAGTGGCCATACCTGGTCCTAAATGCTTTCTTTCTAATATCATTTGGCTCTATACGGATCTGATGATATCCCGAGGCCAAATCAATCTTAGAAAACCACTTGGCACCTTTGAGTTGATCCAACAACTCGTCTATTCTGGGTAACGGGTACTCGTTCTTCACAGTAACCCTGTTCAACCCTCGATAGTCAATACACAGACGCATGCTACCATCCTTCTTTTTCACAAAGAGGACTGGTGCACCCCAAGGGGAGCTACTTGGTCGTATGAACCCCTTGTCTAGCAATTCTTCTTATTG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

970

Start:

17834881  

End:

17835850

Strand:

+

>A01_LTR-Gypsy_91

TGTTGGAGTCAGGGATCATTAGACCAAGTATCAGTCCTTTCTCAAGTCCTGTGTTATTAGTAAAGAAGAAAGATGGTGGTGTACGCTTTTGTGTGGATTACAGAGCACTCAACAGAGCAACAGTTCCGGATAAATACCCTATTCCAGTGATTGATCAACTTCTTGATGAACTACATGGTGCTAAGGTGTTTTCAAAATTGGATTTAAGGTCCGGTTATCATCAGATTCGTATGAGGGAAGAGGATATTAACAAGACTGCTTTTAGGACTGTGGAGGGTCACTATGAGTTCTTAGTCATGCCATTTGGCCTGACTAATGCCCCTGCCACATTCCAAGCACTCATGAACAAGATTTTCAAACCTTTTCTACGATATTTTGTATTGGTATTCTTTGATGATATCTTGGTGTATAGCAAATCAGTGAGTGAACACGTTCAACATTTGGAGAAAGTTCTGCAAGTTCTTAGAGAGCAGAGGCTATTTGCAAATCGAAATAAGTGCTCATTTGGTGTCTCTCAAGTTGAGTATCTGGGGCAAATTATTTCTCAAGCAGGTGTTGGTACCGATAGTCAGAAGACTGAAGCAATGCGTAACTGGCCTACTCCAAAATCAGTGAAGCATCTACGGGGATTTCTGGGGCTAACGGGTTATTACCGTAAATTTGTGAAGGATTATGGTATCATTGCTCGTTCCTTGACAGCCTTATTAAAGCGTGACATGTTCTTGTGGTCAGATGAAGCACAGAATTCATTTGAGAGGATAAAAACAGCAATGACTGAAGCGCCTGTTTTAGCCTTACCAGATTTTTCTAAGGTATTTGTTGTGGAGACTGATGCATCGGGGTTTGGTGTTGGAGCAGTTCTAATGCAAGAGAGGAGACCAATTGACTATTTTAGTCATGCATTAACAGAACGAGAGCAGAGTAAACCAGAGTATGAGAGAGAACTTATGGCTATAGTGATGGCTGTGAG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

129

Start:

17936266  

End:

17936394

Strand:

-

>A01_LTR-Gypsy_92

CGTTGGAAAGTGGCAGGGGCATTACAAAGACTGAATGGCATTCTGCTGTATGCGAATGTTCCGTAAGGGCATGTAAAGGTGGTATTTTCTTTATCGTCAGGATGTATATGGATTTGGAAAAATCCAGAG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

115

Start:

17974613  

End:

17974727

Strand:

-

>A01_LTR-Gypsy_93

AGTGGTCTAGCGATTTTGCTGAAATCTTCTATAAACCTCCTATAAAATCCTGCATGGCCGAGAAAACTTCTTACGTCTTTCGCGTTTGTGGGTGCAAGCAAACCGGTCATTACCT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

254

Start:

17974970  

End:

17975223

Strand:

-

>A01_LTR-Gypsy_94

CGTTGGAAAGTGGCAGGGGCATTACAAAGACCAAATGGTATTCTGCGATATGCGAATGTTTCGTAAGAGCATGTAAAGGTAGTATTTTCTTGATCGTCATGATGTATTAGGATTTGAAAAAATCCAGAGTATCCATCAAGAAAACAATAGTATTGGTGGTTTGCCAATCTTTCCAACATTTGATCAATGAAGGGTAAAGGAAAGTGATCTTTTCTGGTGGCAGCGTTTAGCTTTCTACAATCGATACACATTCG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

87

Start:

18033148  

End:

18033234

Strand:

-

>A01_LTR-Gypsy_95

CGGGAAAGATGATCTGCAACCCCGTTTTCTACTCCTTTTTAACTTTAATCTCTATGTCAAATTCTTGACGTAGAAGGATCTATCGCA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

149

Start:

18033318  

End:

18033466

Strand:

-

>A01_LTR-Gypsy_96

AGGTATTGGCGGAACTTTTCAAATACATAAACTACAGCAAGCAGTTCTTTTTCTGCTGTTGCGTAATTCCTTTGTGCCTCGTCGAGTGTTCGACTGGCGTAGTAAACTGCATGTAGCTTTTTGTCTTTCATTTGGCCAAGAACTGCTCC

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

260

Start:

18065369  

End:

18065628

Strand:

-

>A01_LTR-Gypsy_97

TTCATGCAACGTTGGAAAGTGGCGGGAGCATTACAAAGACCGAAAGGCATCCTGCGGTATGTGAATGTTCCGTAAGGGCATGTAAAAGTGGTCTTTTTTTTATCGTCAGGATGTATAGAGATTTGGAAAAATCCGGAGTAACCGTCAAGAAAACAATAATATTGCTGATTTGCCAGTCTTTCCAACATTTGATCAATGAAGGGTATAGGGAAATGATATTTCCTTGTGGCAGCGTTCAACTTCCTATAGTCGGTGCACAT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

109

Start:

18093159  

End:

18093267

Strand:

-

>A01_LTR-Gypsy_98

TGTTTAAGTCTATGTAGTCGATACGAAGACTGAAACTTCCAACTTTCTTCTTTACAAAAATAATGATGCTTCCCACGGTGAAGTACTTGGTCTGATAAAATCCATGTCT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

89

Start:

20039174  

End:

20039262

Strand:

+

>A01_LTR-Gypsy_99

TCGTCAAAAAGAAAAATGGTAAGTGGCGCGTCTGCGTCGACTTCACCGACCTGAATAAAGCCTGTCCAAAGGATAGCTACCCTCTTCCC

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Gypsy_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

99

Start:

20041234  

End:

20041332

Strand:

+

>A01_LTR-Gypsy_100

ATGCGATGGGCGATGGACATCATAGGACCGCTCCCTTGTTCCCGCCAAAGACGCTTCATCCTTGTCCTGACCGACTACTTCACTAAGTGGATAGAAGCT