ID Class Order Superfamily Length Start End Strand View
Super_scaffold_95_2172966_2327731_LTR-Copia_48301 RetrotransposonsLTRLTR-Copia1345549355626+
Super_scaffold_95_2172966_2327731_LTR-Copia_48302 RetrotransposonsLTRLTR-Copia866287462959+
Super_scaffold_95_2172966_2327731_LTR-Copia_48303 RetrotransposonsLTRLTR-Copia1796333563513+
Super_scaffold_95_2172966_2327731_LTR-Copia_48304 RetrotransposonsLTRLTR-Copia24377802080456+
Super_scaffold_95_2172966_2327731_LTR-Copia_48305 RetrotransposonsLTRLTR-Copia1938061380805+
Super_scaffold_95_2172966_2327731_LTR-Copia_48306 RetrotransposonsLTRLTR-Copia16548080182454+
Super_scaffold_95_2172966_2327731_LTR-Copia_48307 RetrotransposonsLTRLTR-Copia1108290183010+
Super_scaffold_95_2172966_2327731_LTR-Copia_48308 RetrotransposonsLTRLTR-Copia1078103304104381+
Super_scaffold_95_2172966_2327731_LTR-Copia_48309 RetrotransposonsLTRLTR-Copia405106085106489+
Super_scaffold_95_2172966_2327731_LTR-Copia_48310 RetrotransposonsLTRLTR-Copia288115192115479+
Super_scaffold_98_188734_270863_LTR-Copia_48311 RetrotransposonsLTRLTR-Copia89346395531-
Super_scaffold_98_188734_270863_LTR-Copia_48312 RetrotransposonsLTRLTR-Copia7373385234588-
Super_scaffold_98_188734_270863_LTR-Copia_48313 RetrotransposonsLTRLTR-Copia853456934653-
Super_scaffold_98_188734_270863_LTR-Copia_48314 RetrotransposonsLTRLTR-Copia4333478235214-
Super_scaffold_98_188734_270863_LTR-Copia_48315 RetrotransposonsLTRLTR-Copia2323528635517-
Super_scaffold_98_188734_270863_LTR-Copia_48316 RetrotransposonsLTRLTR-Copia2573582236078-
Super_scaffold_98_188734_270863_LTR-Copia_48317 RetrotransposonsLTRLTR-Copia12463662537870-
Super_scaffold_98_188734_270863_LTR-Copia_48318 RetrotransposonsLTRLTR-Copia16234762049242+
Super_scaffold_98_188734_270863_LTR-Copia_48319 RetrotransposonsLTRLTR-Copia2026777167972+
Super_scaffold_99_627909_653288_LTR-Copia_48320 RetrotransposonsLTRLTR-Copia5999871585-

< 2412 2413 2414 2415 2416 > Total 2416


Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48301

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

134

Start:

55493  

End:

55626

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48301

TAATACATATCAAAATATACTTGTAAAAAACCTTAAAAACTAAGCCCCGCGTATTCCCCGATTACTCTCCGATTTTTCGGTAACTCTCTAGGCGTAGATCAGCCGCCCGACTAGCGCCTAGCGTAGTTTCTAAC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48302

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

86

Start:

62874  

End:

62959

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48302

TTTGGTTCGGTTTGGATCGGCTTCGGTTCGGTTGGTTCGATTCGACTCGGTTCGGTTTTTTTACCCACCCCTAGACTCCCATATGA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48303

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

179

Start:

63335  

End:

63513

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48303

TTCTTAGCGTAAGAAAACAGCTATTATATGTTTTTGTTAGCATTATTGAAACCGCTATGTCTGTCCGAGTTATAATAGGTCCCCCTATATGATAGCAGTTTTTAAAACGCTATTATATCTGGGACATATGATAGCATTGTTTTTAACTTGCTATGGTTAGTCAAGCCCTTATGACGGCT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48304

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2437

Start:

78020  

End:

80456

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48304

CATGGCTGATTTAACAAGCTCTTCGGCTGATCAAAGAAAGGATGAAGCGGTGTCACGCTCACCTTACTGGTTGTATGGCTCCGACAATCCAGGAGTCATGATTTCCTCTGTTCAGTTGAATGGAGAAAATTATAATGAATGGTCTTCAGAGATGATCAACGCTCTGCAAGCTAAACGAAAATTGGGTTTCATTAAAGGAACTCTGAAGAAGCCGGGTGAGGACAGTCCCGATCTGGACAACTGGTTGACAGTTAATTCTATGATACTGGGCTGGATTCGAGCATCTATCGAACTAAAGGTGCGCTCGACTGTGACATACATTACGGAAGCGTACCAATTGAAGGAAGATCTGAAACAGAGGTTTTCCGTGGGGAACACGGTTCGTGTTCATCAGACTAAAGCCCAGCTTGCTTCGTATTGACAAGATGGACTTTGGCAAACTTTCAACATTGTGGGAAGAGTTGCAAGTGTATCAGCCAATACAGGCTTGTACATGTAGAGCAGCTGCAGCTATAGCTAAAGAGAGCGAGCATGAAAAGATTCATCAGTTTGTGATGGGTTTGGAGGATTCACGATTTGGAAATATATCTACCAACGGGATTGGTCTGGATCCTTTACCTTCGCTTGGAGAAATATACAATAAGATGGTGCGGGAAGAACAGAGGTTGACATCCACTCGCGGTCGTGATCAGCAGCAAGAGGCAGTTGGTTTCGTGGCAAGCCAGAGTTCAGCTTCTTCTTCTTCAAAATGAGACACTCCAAACGACTCAGTATCCAACAAAGACGACAACTCAATCTTGCGATCTCGTATGATCTGCGCTCATTGTGGTCGGAGAGGTCACGAAAAGCGTGACTGTTGGCAGCTGGTTGGCTTTCTAGATTGGTTCACTGATCGAAGCAATGGTCGTGGACAAGGTGCTAGTATCAGGGGAAGAGGCCGAGGGATGAACAATCGTGGACGTGGACGGGTTAACGTTGCTCAGGCTACAAGTTCCAACTCGTCGTTTCCAGAGCTCTCTTCTGATCAATGGAGAATCCTCAGTCAGATGATACAAGAGAAAGCTGCTGGTAATTTGGCCTCTGATAGGCTGTCTGGTAAGAAAACTTTGGGTGATGTAATTCTTGATACGGGCGCGTCGCACCATATGACAGGAAATCATGATTTGTTGATTAATGTTGAGACGATTTCGCTGTGTTCTATTTTCTTTGCCGATGGTAACAGAACGTTTGCAATAAAGATGGGAACTTTTCTGTTGTCGGATACGATAAAACTGCAGAAAGTCCTATTTGTTCCTGACCTGAACTGCACTTTGATATCAGTTGCAAAAATTTTAAAACAAGTCAATTGTTTTATGACTTTTACTGATACAATATGTGTTTTGCAGGATCGTTTTTCGAGAACTCTGATTGGAGCCAGTGAAGAACAAGATGGTGTGTATTACTTTACGGATTTGGCTTCAGCAAAGAGTCATCGGGCAGTCGGCGGTTCTGATCATGTCATGTGGCATCAATGTTTGGGTCATCCGTCTTTTTCGGTGTTTTCAGATTTATCTTTTTATTCTAAACCTGCTAGCTCGAGTCCATGTGACACTTGTTTTCGAGCGAAGCAAACACGAAATTTTTTTTATGAAAGTATGAATAAAACAACAGAGTGTTTTTCTCTTATTCATGTTGATGTCTGGGGTCCCTACAGAGTTCCCTCTTCTTGCGGAGCAGTCTATTTTCTGACTATAGTCGACGACTACTCTAGGGCTGTATGGACGTTTCTTCTTCTCGAAAAATAAAAAGTTCAACTAGTCTTAAAGAACTTTCTGGCTTACACAGAGAAACAGTTTAACAAATCTGTAAGAATGGTACGTAGCGACAATGGGACAGAGTTTATGGTTCTCTTATCATATTTTAAAAAGTTGGGAATCGTTCATCAAACGTCATGTGTTAACACTCCACAACAAAATGGACGTGTGGAGAGGAAGCACATGCACATTTTAAATGTTGCACGAGCCATCTTGTTTCAAGCAAATCTTCCAGTTAAGTTTTGGGGAGAAGCAATACTTACAGCTGCGTATCTAATCAATAGAACCCCTTCTTCAGTACTCAATGGTCGATCACCGTATGAGGTGCTTCATGGTGCTAAACCGGACTACAAATCCCTGCGAGTGTTCGGATCAGCTTGTTATGTTCACAAAGCCTCTCGAGACAAGGACAAATTTGGTCCTCGTAGTCGCTTGTGTGTGTTCGTCGGATACCCTTTTGGCAAGAAAGGTTGGAAAGTCTTTGACATTGATAGGAATCAGTTCTTTGTGTCCAGAGATGTAGTCTTCCGTGAAGACTTGTTTCCTTATGCAGACCCGCAACCTGCTCCTCCAGTCAGTCCTCCCGTTGCGTCATCAGCGACGAAGACTGGATTCTCCCATTGTCAGGCGAAAGGGGGAGCAAT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48305

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

193

Start:

80613  

End:

80805

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48305

ACTCCGGTGATCACAACATCACAGTCTGACTTGCTCCTACCGAAGAAGCAGCAGTACCTACAACATTGGGCAGGGGTCAACGGGAGAAAACTAAGCCTGTAATGCTCCGTGATAATTTGCTCTACAATGCAACGGCTGATTCCGATAGTAATACACATTATTTTGTTTCCACCTCTCCCACATTATAGTCTTC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48306

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1654

Start:

80801  

End:

82454

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48306

TCTTCGTCTTCGGTCTCAGGTAAATCCTTGTATCCTCTGTCTGATTACATAACTGACGAGCAGTTTTCTACTACACATCGAGCTTTTTTGACAGCCATCACAAACTCGGTTGAACCAAAGAATTTAAAAGACGCCATGAAACTCGATGTATGGAAGAATGCAGTTGGCAAAGAAGTAGTGGCTCTCGAAGACATCAATACTTGGGACATCACTGATTTACCACCGCGGAAAGAAGCAATTGGCTGTCTTTGGATCTTCAAAATCAAATATAATGCAGACGGTACAATAGAGAGATATAAAGCGCATTTGGTTGTCAACAGTAACAGTCAAATTGAGGGTGAAGACTACAATAAAACCTTTGCTCCAGTGGTTAAGATGACAACAGTTCGAGCTTTGTCACGTCTCGTTGCAGCCAAACAGTGGGAAGTGTATCAGATGGATGTCCAGAACGCATTCCTTCATGGTGATCTTGAAGAAGAGGTTTACATGAAATTACCTCCAGGTTTCCGACATTCTCATCCAAACAAAGTGTGCAAACTGAAAAAGTCTTTGTACGGCTTGAAACAGGCTCCTAGATGCTGGTTCAAGAAGCTGTCTGATGCCTTAATTCGTTTTGGTTTTGTTCAATCTTATGAGGACTACTCCCTCTTCTCTTATGAACGCAATGGTATTGAGCTTCGGGTCCTTGTCTACGTGGACGATTTGTTCATCTGTTGTAACAATTCACATATGGTCCGAAGATTCAAAGAGTATTTAAGCAAGTGTTTTGCAATGAAAGACTTGGGCAAGCTAAAATATTTTCTCGGCATTGAAGTCAGCCGAGGTCTTGAGGGTATTTTTCTTTCACAGCGTAAGTACACGCTCGACATTATCGCAGATACTGGCAATATTGGCTCCAAACCAGCATTGACACCTTTGGAGCAGAACCATCACCTCGCCGAGTCAACCGCACCTCTCCTCACCGAACCGAAGAAGTATCGTCGTCTGTTGGGACATCTGATTTATCTTCTAAATACTCGTCCTGAGTTATGCTATTCAGTTCATCTCCTCTCTCAATTCATGCAGGCGCCTACAGAAGAAAACTGGTCTGCAGCACTTAGAGTTGTTCGTTACTTAAAGGGATCACCCGGCCAAGGCATTCTTCTCATATCAAACAACGACCTCATGCTCACTGAATACTGCGACGCAGACTGGAGTGGTTGTCCCGTGTCTCGACGATCCTTAAGTGCATGTGTGGTTATGCTTGGCGGGTCTCCAATTGCTTGGAAGACAAAGAAACAGGATACTGTTGCAATGTCCTCAGCAGAGGCTGAATACCGATCAATGGCGGTTGCTCTAAAAGAAACAAAGTGGATACGTCGTCTACTCAAAGAGCTTGATGCAGAACAACTCGAGCCTACACGTTTCTTTTGTGACAGTAAGGCAGCGATACATTTTGCCGCAAACCCAGTTTTTCATGAGCGCACAAAGCATTTGGAACGTGATTGTCACTCAGTTCGTGACGCTGTCAAAGCGGGTCTTATCACTACCCAACACATTACTTCTGAGTCTCAAGTTGCAGACATTTTGACGAAAGCCTTAGAACGAGTGCCGTTTCAAACCATCATGTCCAAGTTGGGTGTTGTTAATCCACACACTCCAACTTGAGAGGGAG

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48307

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

110

Start:

82901  

End:

83010

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48307

CTAATTAACTGCTATTAATGTATACCGAAATCGAAAAAAATTATCTTTAATAGCTGTTTAGAAAACAAAGCTATCACAACGTGCTATCAATAACATTTTACTTGTAGTGT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48308

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1078

Start:

103304  

End:

104381

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48308

GTTATCAGCACGAGTTGTTCTCTAAAAACCCTAGCTAAAAATCGACCACCTCTAAACTCTATTCAAGCCGCCAACTACTTTCTCATAAACCCTAATCCTAATTTCCTTTTCTGGTTCGATATCATCCCATAAACCTCAGATCGATCGACGTACCACCACACGCATTGATCGATGTTGGTTCAACCGACATAGATCAACATCCATCCGAGCAGTTTCAATCCGACCAAGGAGCTTCCGTTCTTGCGGCCAGTACCAGCTCGTGATCTCCTTCTCTTTGGTGGTTCGGTTTTCAACCCTTCAAATCTAAAGGGAATTAAAATTCTAAACCTTAAAACCCATAAAACGAATTGGTTGTTTTGATAAAGTTTAAACCCAAAAATTTGAAATCTCTAATGTTGAAAGCCCTAAGATAATAGATCCCAAAACCCTTCTTGAGTAAATCGGAGCTCTCAAGTCCGATAGAGATTGTCTTAAACAATTAAACTCAAAACCCTAAAAAGTTTTGAATCTCAAAATCCTATGATCATCCTAAATCTTATGATCATATTGTGTCTCTTAAACCCCTTTGATCTTAATGATCAAATTGAAAACCCTAGAAATCGATCCCCCCCTTTTTTCCTAGTCGATTTCATAAACCCTAAAAATTAAATCGAATTTATTTAAATTGATTGACTGCTTGCTTGATTTTAATTGAGGTTAAAATTTTGGGCTTCTTTGTCTTGAATATCGATCGACATGCCATTGCACGTGTCGATCGATGATGTTTCGTGTCGATTGATTATTAATTATAAAATCCTGATAATGATTGTTTGATTATTTAAATCCGAATTTTGAATCACCTAGAAACAATTTGGTAGGATCTCATCCGAATTTGTTGTTTGAATTAACTAAAAATTGTTTGAGGTTTCTTGTTTCATAAATTGCTTAGAAACTGTGATTGCTAAGGAGTTTTAAAATCCGGTTGCATTAAAATCATATAGAATCCGATTGTCCATATCAGTAGCCGTGTGGCTTATATTGCATTCATGTTTGATCAATAGGTCGATCGATCGACCTGCCATTGCACGTATCGATCGAT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48309

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

405

Start:

106085  

End:

106489

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48309

GTATGATTGAGGCCAATGCCACATTTAACAAAACAGCCATCAAAAATTTCACTTTATGGCATGACCGGCTGGGTCATCCCGGGTCAACTATGATGCGTAAATTGATTGATAATACCAGCGGCCATTCACTTAAAGAAAAACGAGTTATCCCTACACACTTAATGTGTACTGCTTGTTCACAAGGGAAACTCATAGTAAAGCCATCACCTATCAAGGTGACCAAGGAAACTATTAGTTTTCTGGAAAGAATACAAGGAGACATTTGTGGACCAATACACCTACATTGTGGAACATTCAGATATTTTATGGTCCTTATTGATGCATCGACCAGATGGTCGTATGTCTGTCTCCTATCGACCCGCAACTTGGCATTTCCAAGATTGCTAGCTCAGATAATAAGATTAC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_95_2172966_2327731_LTR-Copia_48310

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

288

Start:

115192  

End:

115479

Strand:

+

>Super_scaffold_95_2172966_2327731_LTR-Copia_48310

GTTGAGATAAGCTTGAAATAGCTTGAGATGCAAGCTACCTAATACTAATGTGTTGAGTTTATCTACAAGGATTAGGAAATATCTAATTGTGTTATTCCTAATGAGCTTAGGATAATTAAAGTGTTATATAAGGAGATGCAAAGTGTGTTGCATAACTTATGAGTTTAAGATTGAGAGCTTGAGGTTTTGAGATAGTTTCCTCAAGAGTTTAATAAGAAGAGAAGTTCTTATTTGTGTGTTCTAATAATCGAGTTTGTGTTCGTGACTCTTGAGACTGATAATCAATAT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48311

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

893

Start:

4639  

End:

5531

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48311

GTTTTAGATTGAAAAACATATGTTTAAGTACTCTTTGGAAGCCATTAGTGGCAGACTATCTTTTACCTTTGAGAAAACCACCAAAAACCATTTGGAGAGTTCATCTCTTGGATTTATTTGATCATTGTTCTTATTATCTTGTTGATTTCTAATCTATTTTCTGTATATCTCTACATGATTAATCTGAAATCCAATATGGGTTTAAGAGGAATCATGGAGATTAGTGAGTAATCCTCTTTGAATTCATGGGTTAGGGAGATTAAGGGTGATTAGGCTAGATTTAGGATGTTTAGGTGTAGATCATTCTTATTCCTTGCTAGTAGAGTATTCATAATGCATCTTCTGAGTTGGCCTCTCAAAAGTTGATCTTTAGGCATTTTCCACCCACAAGGTGTTTGATGAAATGCCTGAGACAACTCTCCTAAGCTTTTAACATACTTTACCAAAGACATTTGTTGTTAAAGGTGTTAAGATAGCCAATAGACTTGTAGTATGATTGCTTTCATGTTATTCAGCCAAAGACATTTGATGTTTGAAATGTGTTAGCAAATGAACATTCATCTAGACATAAGTTTGTTTAACATTGTTCTAAGCTAAGGTGATAGTTGATTATCATTTGCCATCTTTAGTTTGAAACTTGATCATCCAAGGTCTAATTCCTATACCCATGAGTTCTCTTTTATCATAACCAAAGAAAATCTCTTCATTTATTGTTTTATTGTTCTGTTATTGTATTCTCTCATTAGTAATAGTTTTAAACCATCCAAATTATCGGTTGCACTTAGATTAAGTAGGTACTTGCATTTTTGGTGCTTTGAATCCCTCAGAACTGGTTCGACATTCACTCAATACTACAACATTTGTCTTAGGAGCCTTAAAAACTCCTAACATCA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48312

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

737

Start:

33852  

End:

34588

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48312

ACCGGCCAACAATCAAACAAGAACATGACTGACCTTCCAACCCAACACCCTGATATGGAGCGCTACGTGACAGGTTAAGGAAAATCCGGCCAATGTCACAAAATTTACTCTGCAACGTAAGCTAGTTCATCCACCAACTCGTCCCGCTAGATCAAGGCATAAGGCCTTGCAACCCATACCAAGATTTAACAGTTTCCGTTAGATCGAGGCCTAAAGTTTTTCAATCCGTACCAAGACCTAACGTTGTGTTAGACCGGACTAGTCAATTATCAAAGTACTCATGATGCGCATATATAAAAATTACTTTATTAATATAAAGAAATATTCTAATATTGAATAACTCAAGACTGGGCCCGGCCTAATGCCAAATCGAGTCAACACAATAATAATCAAAATACCATTTACAAAAGGCATGAAAATCTACACCGGCGGTCCTAACGTCCAGCACCAAACTATCCGATCATCTTTACTAAAGCAACCTACAAAAAGGACAACGGAGTTGGATGAGTAACTTAATGTCACTCAGTGAGATGGCGGCCTCTACCCGCAACCTAGTAACTAGCCCATAAAACCCAAAATAACAATTAATCTACCCCTAGCAGGAAATCAAAGTTAATGCTAAAAAATTAATCACAATTCACTATCAAATCAAACTGTTACTAAGTTAGACCCGGCATACTGCCATGATCTTACTTCAAGTAACGGGAACCTGCATGAAAACAAGTCAACAACCAATC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48313

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

85

Start:

34569  

End:

34653

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48313

AAACAAGTCAACAACCAATCGACAATTACCAAAGAGACACCAAGCCTAATCCGGTACCTACCCGAAATTAGATATCAATGTTAGA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48314

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

433

Start:

34782  

End:

35214

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48314

ACTCTAACACAACACAACACTCTAACCCGGAAAATGGTGACTTTTTGTTAATCCTCACCATCCTCGGCAATATCCTATCTCCTTATCACAAAGACTAGAAGAAGGAATTTAAACCGAACGTGGCCCAAAGTACGGTCGGATCACCGCGCGACTGCCCCAGTACAGTCGGGCCACTGTCAGTTGTTACAGACGATTGTGGCCAACAGTACAGTCGGGTCACCGCGAGACAGCCCACAATACGTTCGGGTCACTGCCGGTCACTACTTCGTCATGTAACCACTCAGCCATAGGCCATTACCCCGTCTCTATGAGTGTTCTCAATCCAGCGAATAAAGGGTTTCCTTAAACCCGTTGGGTACGAGGTCGAGAAAACACTAATTCACCCCTAACATGCCTACCAAGGTGAATTACACACAAGCTATATGGCATACAC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48315

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

232

Start:

35286  

End:

35517

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48315

ACTAAACAAGAATATCAACACTAATCAAATAAACTAATTAGTCACTCCATTACCAAGAGCTGACTAACCTCAATCAACAAGATTAATTAAACGAGGAAGCATTTAATCAAACAAGCAATCAACTCAACAAACCGTTACCCAGATAGTTTAGCCTCCTGCTACGAAACTATCTTTAAAGATAACGGGAACCTACACTCAACCATATCAACACACAAGAATAAAAAACATGATG

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48316

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

257

Start:

35822  

End:

36078

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48316

TAAACTGGTATGGACAAACTCAACTCGAACAGAGCCTTCTTTAGCTTCTGGACAGTTCTTCTGACTTTCTGGTAGAGTATCGAACCGTGACCTAGACTGTAATGAACCCATGGAACTGAAATGATCTTGGACAGCACCTCCACTTGATCATCAAAGAATATGACTGGATTGGTTTGAGCAGAGCTTCCGTGTAACAGTCGCAGAAAATCTTCGATTGGACAGAACTCAACCTCTCGGTGAAATATCGGTCTTCAGAA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48317

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1246

Start:

36625  

End:

37870

Strand:

-

>Super_scaffold_98_188734_270863_LTR-Copia_48317

TTTGGTGTGTTCTGGATGAATGAAAACTGAAGAGAGGGCTGGCTATTTATAGAAGTCATTGGCCATTGAGGAGAGGCCACACGAGCGACTGTGTGTCAGCCTGCATGCTTCCGGTTGCATGCGCGGCGACACCACTCACATCCACATGGCTTGCTGCATGGCTGGGGTGCATGCGTTGCGACACACTGCCCTCTGCATGTCAGCTTGCATGCGCCGATTGCAGGTACTGAGACACCTCATGCTACGGCATGTCAAGCTGCATGTCCTGGTCGCATGCATTGCGATACCTCGTGCCTCCATGGACGACCAGATATCCAGCATGTCTTGATCGCATGCAAGGCGACACCACAACATCCACATGTCGATCAGCATGCTTCGGTCGCAGGTGGAGTTGCACCTCGTGCTTCTGTGTGTCACTCCGCATGCTGCGATCATTTTTACTTCAACACCTTGTGTTTCCCTTACCACATACTATGCCAGGCAGTTGCCACCACGTCCTTATCTCTTAGATCAAGCCACCTCGAGCTATTCGGTCCTTTTGTCTGATTTTGACCCTTCCGATGATTTTTTGACTGTGATCACTCCCCAATAATTTTCCATTCCCGTTCTGATGCACTGAATATTTTTAATGAACTCCAAATGAGTTCTGATCTTGAAGGAAAATATTTTCCGAGCCTCCGGCTTCCTCGAAAAATTCTATAATACCGAAATCAGGGTTTTTGTTCAGTTTCGGGTTTTCCCGCCGTGCTTACTTCCCGTCGTGCTTACTTCCCGTCCTGCTTAATTCCCGTCCTTCTTCCAATTTATTATGTCTTCAAAATAATATTTTACTGATACGAAGTTTTGCAGAAAAATTTGTGCTTAAGAAATGTCGTGCTTCTAAAACGTCGAGCTTCTAAAACGTTGTGCTTCCAAAAATGTTATGCTTCCAAAACATCCTTCTGATCAATCTAACACGTTGTCTTACCATGGTCGAGCAGCTTATTTGACTCATGGTTCAGTCACGATCAATTCTTCGACCACCTTGTTCTTCAAAATTTCTCGATAAATCCTTATCGCCCGCGATTCGGCCACCAAGTTGATGCTCGACCAATCTTCTATTTTCTTGAAATCATGTCAAGTTTTTTGTGATGGAAACTTAACATTACTCAAGATGTTTCGATCCCCAAAAGCTCAGCTCCAAAATCTGACTTTGTCGATCTCAACAGTTTTACCCCTTCAAGAGGGTTCCTACAGTGCCCGTCCT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48318

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1623

Start:

47620  

End:

49242

Strand:

+

>Super_scaffold_98_188734_270863_LTR-Copia_48318

AATGCCTAACTTATATGATCAAAATGCACAAGATATGAATGCTAAAAACATGTAAATATGCAAGATATCAACTCCCCCACACTAGTCCTTTACTTGTCCTCAAGTAACTTTTCAAAACACAAGGAGGAGAGATTAGAGATGGGAGCAAAGCCAAAAGAAACACTCATAAGCACTCAACTGACATCCTAAAGAAACATAGCAAATAGCAAGAGCAAAACTCTCTTATTATGCTCTAGCTTCACAAGGCCTATCAATTACTCTTATGCCTCTACACAAGATGCAATGCTCTATCAACCACAGTTCTCTTAACCAAATCTCACATTGATTCACACACACACACTAGGTGAAGTCTCACAAATGGGCACATGATCTCAATCATTTGGCTAGGTGATCAAATGGTCTAATATGGATGAAAATGAGGGTTTCAATGCATCATTTCAAGGTGGCAAACACTCAAGAATCAAAGAGCTTGATCATTATGCAAAATTTATCTAAGACTAGGAGCAATTCATGTATACATGGATCCATCCTCATCATTCTACCCCATTCCTAAGAGATTATAAGTTCTACACCCTTTTTATTCATCCCATAACCCAAAATGAAAAATACTCACATCACTCACCCAATGAACAATTTTCTTTCTTCAAAATTCAACCACTAAGGACCCTTTTATTCACAATTCACAATTCACACTTCTAAGCTCTAACACTTTTTGTTTTCCCTTCCCCACTATCTTATTGAATCTTTCTTTTTCTTTTATTTTGTTTTATTCCCTAGGGATTTTCTTTCACAATACACTCTTTTTCTCATCAATCTCAACTTTATCACTTCCCAAACCCAAGATATAAACCTTTAAGGAACAAAGACTCACTCACCATCTTAGAAGTTAGCTCAAATGAGGACCCTATGCTAGCAAGAGATGAGAACAAATCCATGTCGCTCTCAATACTCTCAAGATTTCGCACATGACAAACTATCAAAAGAGGCCTCACTCGTGCAAATCAATGTAGGCTTTAAAGAATGGATAGGGTTCAAGGGTATGGAAGTGCCATTTGGGTTAACAAAGAGTACAATGGAGAAAGATAACCCAAATGTGTATGAGATCATGATCAAGTATGACAAATGCCATATGCAAGAGAAATTAAGATTCATTCAAGTTAAGTTCAGGATGGAGCTGGTTTCAGAACAATGCCAATATCAAGCAAGCAAGCAAGTTTCAAGAAGAGTTTTCAAGGCTCAAAGCATGCAAGCCTTTCAAAAGATGCTTAAGCTACTTGATATGTTTAACTATGGTGCCAAATTCAGTGTAAACAAGTATTCTTTACTAGGCAATGCTCCATGTGCAAGTGAATGCAACCTATATGCTCTAGACTCAGTCTTAAAGATGCAAGTGATGCAACTACATGATTCAAAAATTTTAATTATTATTTTTTTTTGGTTTTTCTATGCATATATGAATGTACAATGCAATGCATGAGACTCACAATCACAAAGCAAACATGATCAAATACCTAGTACCTCCCCCACACTTAAATCACACAGTCTCTTTGTGAGTAAGAGAGAAGGAGATACCCCAACAAGACAAAAGCAAATGTATATACAAGAAGGGTTGGAGTGATACCT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_98_188734_270863_LTR-Copia_48319

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

202

Start:

67771  

End:

67972

Strand:

+

>Super_scaffold_98_188734_270863_LTR-Copia_48319

CGGAAAATGACACGGAGGTTCGAACGAGAGTGCATCGGTTTGTTTCGTATAAGACCGAGGTTCGGTTCTGTGCTCGGTCGCTACGTAGCGACCGAGCTTGCCTCGAGCTCGGTCGCTACGTAGCGACCGAGCAGGTGACGTGCTCGGTCGCACGTAGCGACCAAGCAGGTGACCTGGCTCGGTCTCTATGTAGCGACCGAGC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_99_627909_653288_LTR-Copia_48320

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

599

Start:

987  

End:

1585

Strand:

-

>Super_scaffold_99_627909_653288_LTR-Copia_48320

TGGTTAATTTGGGTTTGGTACCCGAATGGGTGTGAACTATATACTTGGATAATGATTGAATCGCGTACGAGGTCACTTTCTTTTTCGACCCTATTCCAAGCCTTTAGGTTACACGAAATCCCTTTGTAGGATAAGACAATCAAATTCTCATTCTTGTTCTAAGCTAAGATATAAGAATAACAAATAGAGCTTTAATGCTTATATGTGTCTCTTCAAAGATCTTTGGTGATCTTTAAACAAATGAATCACTTTCTCTTTCTAACTATTAGTTTCTGATTTTCTCTTGTTCAAGTTGTACAAGTTATCAAGTTCTTGAAGTTATGATTTCCTAATGCCCACAACTCCTTTATATAGAGTACTAAATATTGCAATGGTTAGTACCAACAGTTATAATGGTTGGTACCAATAGTTGCATTGGTTAATCAAAAGTCACAATAGTTCATTATCAAAGGCTTTAATCATCTAAAGTTGCAATAGTTTATCATCAAAGATTGCAATGGTTTATTACTAATAGTCACAAACACAAACAGTTACAATCATTCAATTAAACAATTACAATGTTTCACTTAAATGGTTGCAATGATACACTTAAATATCCA