ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Caulimovirus_1 RetrotransposonsLTRLTR-Caulimovirus188322089292210811-
ChrB01_LTR-Caulimovirus_2 RetrotransposonsLTRLTR-Caulimovirus41830763803076797+
ChrB01_LTR-Caulimovirus_3 RetrotransposonsLTRLTR-Caulimovirus33530768143077148+
ChrB01_LTR-Caulimovirus_4 RetrotransposonsLTRLTR-Caulimovirus35230780173078368+
ChrB01_LTR-Caulimovirus_5 RetrotransposonsLTRLTR-Caulimovirus156230783733079934+
ChrB01_LTR-Caulimovirus_6 RetrotransposonsLTRLTR-Caulimovirus9330913693091461+
ChrB01_LTR-Caulimovirus_7 RetrotransposonsLTRLTR-Caulimovirus11030914773091586+
ChrB01_LTR-Caulimovirus_8 RetrotransposonsLTRLTR-Caulimovirus199930915723093570-
ChrB01_LTR-Caulimovirus_9 RetrotransposonsLTRLTR-Caulimovirus141330936703095082-
ChrB01_LTR-Caulimovirus_10 RetrotransposonsLTRLTR-Caulimovirus56630950903095655-
ChrB01_LTR-Caulimovirus_11 RetrotransposonsLTRLTR-Caulimovirus35230956603096011-
ChrB01_LTR-Caulimovirus_12 RetrotransposonsLTRLTR-Caulimovirus75358983055899057-
ChrB01_LTR-Caulimovirus_13 RetrotransposonsLTRLTR-Caulimovirus62760080896008715+
ChrB01_LTR-Caulimovirus_14 RetrotransposonsLTRLTR-Caulimovirus35860089226009279+
ChrB01_LTR-Caulimovirus_15 RetrotransposonsLTRLTR-Caulimovirus10560095036009607-
ChrB01_LTR-Caulimovirus_16 RetrotransposonsLTRLTR-Caulimovirus35460097336010086-
ChrB01_LTR-Caulimovirus_17 RetrotransposonsLTRLTR-Caulimovirus375260103006014051-
ChrB01_LTR-Caulimovirus_18 RetrotransposonsLTRLTR-Caulimovirus185860141806016037-
ChrB01_LTR-Caulimovirus_19 RetrotransposonsLTRLTR-Caulimovirus40260160426016443-
ChrB01_LTR-Caulimovirus_20 RetrotransposonsLTRLTR-Caulimovirus43374570687457500+

< 1 2 3 4 5 > Total 43


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1883

Start:

2208929  

End:

2210811

Strand:

-

>ChrB01_LTR-Caulimovirus_1

ATTTATTTTACATAATTAAACATACTTATTTTAGTCACCGCTTAGTTAGTGGTCGATCTCGAATTCAATGATGTATTTGTCGCAGCATCCGTAATGATCGTCTGGACATTCATACTCTTCTTCTGGTTCTTCGTGAGTTTGCGGACATTTTTCCTACTTCATCTATATTCATTGAGTCATCAGAAAGTTGTGCATCTTGGAAGTATTCTGGTGGGCATTCTTGAGATTGTTGCTCCGGCTTCGTCGTCTTCGAGATTTCTGGAATATCTATTGGTTTTTCCCATTTTTCTATGAAGAACTGAAGATCTTCGTGGAGGCTCATTTGGTAGTCGATCGGATAGTAAGTCCAATTTGGGGTGAAAGGTACAGGGAGGTTTGTTTGGCGCTATTGAGACGAAATGCATGGGTCTGGAAGTCTTCGTACGCTTTGTTGTCGTTGATGTTGAAGTCTGGTCTGACTTTTTGTGGATAGTCATTGTGATGAATGAGGGTTGGTAGAGCATGGATCTTGTTGGTCTTGTTGTTTACTTGAACATAGCGATGGAAGAAGTATATCGCGTGGGGATTAAAGAAAGGGTTGAGACCTCCTTGACCTCTTAACTTCTTGAAAGATAATCATGTTGCTTTTGCTGACCTTCGTAGTTTTCCGCTCCAAATGGAAAGTGGAGCGAACTAAGACAAGAACGTCGAGAGTCTGTTCTTGTGTCCTGGCTGGGAGTCGGTGAACTGAGAGTTGACGTATTGGTATAACCATTGGATGTCAAAGGTTATGCCTATAGTGTAGATAGAACAGAGATACCAGGCGAGCGCTTTCGATCCTGTAGAGATGAGCGAACGGGCAATCGGGGTGAATTCTCGTCAGATAGATGATGAGATTCCAGACTCCGTATTTTGACAGGATGATGGACTGATAGTAGATAATTTTATCGCGGAGGCATTCATGTAGAGCATTTCGGTCGATAAGTTTGTGAGCGTCGTCGAGCATGTTGGATGCGAAATCATAGTAACTTTTTGCTGAAGAGCTTTCCATCATTTGTATGTCTTTTATTGAGTTTCTACTGAGCATATCAGCAAGTGTGTTCTTCGAGCCCTTTAAATAGACAGATTCGAAATCGTACTTCGAGAACCATTCGCTCCACCGTAATAATTGCTGATGTGAGATCATCTTTTGCTTGAATTGTAACATCTTTGGGAAATATGAAATATCCATTTCAATTCAAAATTTATGTTCTATCAGATGAAACTTAAACTTCTCAATAGCTTTCTTGACCGCTAGTATTTCTTTGAACGTGGAGTGATAATGTATTTCGAAATCTTTAAAGCGTCCATTTTTGTATCCACATATTTGACGTTTCCCATTTATTTCTTCAAATAAAATGGCTCCCTAATATTTGTCATTTGCGTCAGTCTGCAAAATGCGTGTGTCTGTGGAAGAAATCTTTAAAGGCAGTAGCTTCTGCACCTCTATTTTTAGGCTTCCGACAGCTTCTGTTTACCGGTTTGTCCATTGCGGTGGATTTTTTGTCAATATCTTCTGTAACGGTTTTGTCAGTCGTGAAAGTTGCGATATAAAATCGTTAACATAATTGATTACACTAAGGAATTGCTGCATTTGTCGTTTTGTGAGATTTTCGTCAGGAAAATCGAGAAGTGTTGTAGTAAGATGGATTTGTGGCGAAAAATTTCCGTTTGTAATTTGCATTCCAAAGAAATCGATGTTGGGCTGGACTATAACCATTTTTTGGGGCGAGAACATAATTCCATACTGATTGATAATACTTTTAAACTGTTGAAGAAATTTAATGTGTTCCTTCTCATTTGATGAGAATAGAAGGATATCGTCGATATATATCAAAGTCGTATGGAATAGAGACTTGAATATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

418

Start:

3076380  

End:

3076797

Strand:

+

>ChrB01_LTR-Caulimovirus_2

TTCCTAACAGTGGTTGAGGTCGATCTAAAGGCCGTGGGGGTGCCTATATCGCTCCCTTTACCTGGAAATCTCCGATCTCGTCTGTCAACACGACTTTGTCAACACGACTAAATCGATTCATGACAGCTTATCTCGTATCAGAGCCTTCATCTTGCGTCATGACTGATAGAATCGTTGTTTATGATTGATTATTTTAAAATTACGGAAAACAGTTCTCTCAAATGTCTAGCTCTCAAATCTCATCTATTGATTCCCAATTTGCAATCTCCACCCTTCCAAAAGCAAAAGCCGCTCTTCCTCTTCCACTATAAATTCCCTTTATGAAATAGAGTATGTTCCTGATCAGTTACAAACTACCCTTCCTTTGGTAAATCCATATGAATATTTTGCAAAAAGCCTAGCGCCTTCTGTTAAAAGT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

335

Start:

3076814  

End:

3077148

Strand:

+

>ChrB01_LTR-Caulimovirus_3

CCATCTTCAAACCGGAAGGTTATGGAATATGTCAATCTAGCAAGTTCTCATCTTGCCAAGTACCAACCACCGAAGAAGAACAATTTATATCTTTAAACATTCCGACACCTACCAAGATTATGGCAGCAGCAAGGCTACACTCATCTTCACTTTGGTGTGGTAGAATTGGTCGGCCTTTGCGAGAAAGGTCTACCAGTCATAGCTCGAATAGCTTTAATCGTCAATTAAAGTCATACCAACAGTGCATTGGAACAGTTCGGACAACACTAAATACATGAGTATTATAACACTATTTCCAAACTTTAATGTTTAGTTACAAGATCCAAATCTTATGA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

352

Start:

3078017  

End:

3078368

Strand:

+

>ChrB01_LTR-Caulimovirus_4

GACTTTGTCAACACGACTAAATCGATTCATGACAGCTTATCTCGTATCAGAGCCTTCATCTTGCGTCATGACTGATAGAATCGTTGTTTATGATTGATTATTTTAAGAATTCTGGAAAACAGTTCTCTCAAATGTCTAGCTCTCAAATCTCATCTATTGATTCCCAATTTGCAATCTCCACCCTTCCAAAAAGCAAAAGCCGCTCTTCCTCTTCCACTATAAATTCCCTTTATGAAATAGAGTATGTTCCGGGCGATCAGTTACCCGAAACTACCCTTCCTTTGGTAAATCCATATGAATATTTTGCAAAAAAGCCTAGCGCCTTCTCTGTTAAAGGCGTTCGTAAACTCAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1562

Start:

3078373  

End:

3079934

Strand:

+

>ChrB01_LTR-Caulimovirus_5

CCATCTTCAAACCGGAAGGTTATGGAATATGTCAATCTAGCAAGTTCTCATCTTGCCAAGTACCAGCCACCGAAGAAGAACAATTTATATCTTTAAACATTCCGGAACACCTACCAAGATTATGGCAGCAGCAAGGCTACACTCATCTTCACTTTGGTGTGGTAAGAATTGGTCTGGCCTTACACGCCAGAAAAGGTCTACCAGTCATAGCTCGAATAGCTTTAATCGACTCTCGGTTAAAGTCATACCAACAGGCGTGCATTGGAACAGTTCAGACAACACTAAATACATGAACTGTATTCGTAACACTATTTCCAAACTTTAATGTTTAGTTACAAGATCCAAATCTTATGAAGACGCTCAAGGTCCAACTACAATTAATCGGAGCACCCATGCAAGAAAAAAGTATCGCAGCTACCTTACATCATCAGATCGTCTACCGAATCCAAAATCACGCTCTCGATCTAGTTCTACCCTCATCCGATGAAGCCTTGTACCTCGAAGTCACGTCAGCATCACATGCACCAAATTCAATAAAAATTCCGCGCCAAATATCACGTGAAGAACTGATACGTCGTCTACCAGAATCTTGGATAACAAGCTATGAAAAGCTTCATCAAGCCACTCAATCGCCCATTCAATCCTCAGAAGTCAGCTTTCATTCACGCAAAGATGGAACTACTACGATCAAGTTTGAAAAACCGAGATCGTCGTACTTCAGAAAATAATTATTCACTCAATTTGCAATCCAAGTTGATGAACGAGACTTCTACGGCCCAGCAAAGAAACAAGATCCCCAAACCTTGTTAGTTCGGCAAAAATGGAGAAATAATCTATCCTTTTATAGATGAAGATGGGCATTGCCGTTTTGACGTCTGCAATTGCACCGCTTGCTCATACGCTTTCTAGAGCTACGAATCCGATGACGAAAAACGAAGTCGAAGACGAAAGAAAAAGGACCATCTCTACAAAAGGTATCTTGAAGGAGATCCTTCAGTTGGTCCACTTGGAGATGACAAGTATGACTTTATTGTCGAGTACTCGGACAAGAGGAATGAACCATCGCATGAAGTACTGATGATCAACCCAAGTAATTTCCCTCCACAAGAAGAGTTCATCAAAGACGACATTGCTCACATCCCTAAGATTCTCTCAGCAGCAGTAGGCTCTTCTGGCCCAATCCAGCTCAGCCAAGCAGAAAAGGTCCTCAACTGGAAAACTGAAAATTCACTTGCTCAAAATCATCTGTTATCAACAATAAATCAAAAGGTTGATCAACTGACGGAATGGGTCAATGAAAGACAACATATCCTTCAGAACTCAATAACAGAAATACATGGGCGACTCAATAATCTTCACCAAGAAATGATGACGATGGCAAAACACATGATGGTGGACACAACTCAGTTTCGAAACAAAGAAGTAGAGACAGCCAGCCTGAAGAGTCAATTAAGAGATCTTCAGCGAAGCCTAGAAAGTATGATTCATAATCAGCGACAAAAGGACTCATACTTCAATCCCTTTGGAAGTACATCATCAGAAGTACCAATGTACCAAGGATC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

93

Start:

3091369  

End:

3091461

Strand:

+

>ChrB01_LTR-Caulimovirus_6

ATCTTATTCTCCTGAATTTCTTTCTGGCTACCAAACCGAGAAGACAAGATCACCATTACCTGGTTTTCTATCCTCTGATGAAGTCTTTACATC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

110

Start:

3091477  

End:

3091586

Strand:

+

>ChrB01_LTR-Caulimovirus_7

CTCCAAGACCTCAACTTTCCCCTAACAAACAAAAAGGCGCTTCTCCAACATCTTCAAGGAGCAACGATATTTTCAAAGTTTGACCTTAAATCTGGATTTTGGCAACTTGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1999

Start:

3091572  

End:

3093570

Strand:

-

>ChrB01_LTR-Caulimovirus_8

ATTTTGGCAACTTGGAGATGTTGGAGAAGCGCCTTTTTGTTTGGTAGGAGAAATTTGAAGTCTTGGAGAAATTGGTTTAGTGGCTTGTAGTCAATGACTAGCCAGAGTTTCCTCTTGCTTGTTCTGCACGATTGTTGACGTATAATGATTTGCATACCCACGGAGAAGTTGTGTTAGAGACTACTCCTTCTTCTACTAACTGATCGCACTAGTCATTTGCTTGTTTTAAAAGAGTCAGTGGCATTCCTGTGTGGCTTGCTTTTGTTGGCATAGTGAGAACGTTTTGTTTGAACGGTAGTGAAACAAAGAACTGGGAGTTTAGCCACAACGGTTTGTCGCACTTCTGAAGGAAATCTTTGTGGGATTCCGCACAGGATGTTCTCGTCAATTCTTCTTTAATTTTTGTACACTCTTGAGAGGCCAATTCTTCAATCGCAAAAAGTCGTGGGACTGCTGTGAAATCTTTGTAGAAATTCTTCCACCGTACGCCTCGAGGTTCGATTGAGATATCGAAGGATTTCTTCAGAGCATAATACGAGTCCCATCCCAATATTACGTTTTTGCCTGGCGCCGTTGATCCAAGAACTTTAGTCGTAATTCAGCATCCGGGGAAGAGCTCAATTGTTATTGGTTTTGATTTGAGCTTGATGGTTAATGATCCGGAATTCGCGACACGGAATTCTTGTTGGTGAGGTAACCACACAGAAGATGAGAGAATCTTAAGATTTATTATCGTTGTGTGGGCTCCAGTGTCTATGAATGCGATGGCATGGACTGGGTCTTCTTTACAAGCTGGATCAAAGATTGTCACCGGTAAATGCGGGGGTTGTATTTCGTCTTGTTTCGGTATTTCGGTGATTTTGAAACAGCAGTCTTCATCTTCATCTAGAGATGATTCATAAGAGTCATCATAATCTGAGTATCCACAAATGTCTTCGTTGTCATCACTATCGTAAGATAGAACTGACTCCAAGTCATGGTTGTCAAGGTCAATGTCTGGTGCAATCTTGGATATCGAGTTGATTAGATATTGCTTCTTTTTCTTCGATTTGTTAGGACAATTTTTGTGTCCTTCTTTTCGACATAGAAAACACCTGGTTGACTTCTTGAAGCTTCTTTTCTTTCGAAAAAAACTTTTGCGTCTAAAGTTAGGAGAATGTCTGGAAAAACGCTTTTTGAACTTCTTGCGCTTACCATAAGAATCGCAAGAAAAGGGTTTCTTGGATTTTGAACACTTGATTGATAGGTCTGGCCTGGCACATATTTTTGATAATTGTTTTGAACGATCCATGGACTCCATCCAGAACTCCTTTTGCTTGCAAAGTTTATCGAGCGTTCCGAAGACATATTGCTGGATTTGACCAATGGAGATTTCTTCGATCGTTTGGCCTTGATCTCTGATCTATAATTTTGTTTGCTGACTAAGATAATCATCAATAGAGGAGAGATAGACATGCTTCAAGCTTGCGTTGTTGAGGCTGTTAAGAGCATAGTATCTTCTTGTCTGCCTTTCAAAGTGTTTTGCAAGGTCTTTCTTCTTTAATGAACAACATTTAGCTGAGAAGAAATCTTCTTGTATTTGCTCCTTTTGATGTGTAGGTGTACCGATGAATTCTCTGTGGATTTCTTCTAGAAACAATGGAATTGTTGTTTGATAAACTTGTTGCTGTCTGTATTCTTCGAGGGAGTTCCACCATTCTTTAAGTGAGCCGGATAGTCTCGCCGTGAATTGTTAAATTACTAGATGCAGGGGAGACGTAATCGCTTCTGAATTCATCAATGCATGGAATTCATCCAATCGATCATTTCATTTGTCGAAGGGAATGTCGTCGAACGTAAATACCATGACTTTTGAAGAAAAACGTTTATTAGGAATTTCTTCTCTCGGAGCTGCATAATTCATTTCTTCATCGCTTGAGTATATTTTGTTAATACTTGGCTCTTTCTTAGGAGTACTTGATCCTTCACCAATTGCGAACTGCTTAGATAGAGACTCTTC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1413

Start:

3093670  

End:

3095082

Strand:

-

>ChrB01_LTR-Caulimovirus_9

TTTTCCAAGATCATTGAGCAGACTAGTCATCGAGAATTTGATAATTCCAATGCCCTTTCCTTTATTGTCAACTGAATCATGACTGGACGATGACGTAAGAGTTGGTCTTTTTGGTGGGTTGATCTGAAATTCAGATCCCTTTTTTCGTCTTGATTTTGATCTAGCTTGTTTTGGCTTTTCATCGAAGATTGAAGTCGAGCCGTATCTTGATGTAAAGACTTCATCAGAGGATAGAAAACCAGGTAATGGTGATCTGATCTTCTGGGTTTGGTAGCCAGAAAGAAATCCAGGAGAATAGGATCCTTGGTACATTGGTACTTCTGATGATGTACTTCCAAAGGGATTGAAGTATGAGTCCTTTTGTCGCTGATTATGAATTATACTTTCTAGGCTTCGCTGAACTCTTAAGTGACTCTTCAGGCTGGCTGTCTCTACTTCTTTGTTTCGAAACTGAGTTGTGTCCACCATCATGTGTTTTGCCATCGTCATCATTTCTTGGTGAAGATTATTGAGTCGCCCATGTATTTATGTTATGGAGTTCTGAAGGCTATGTTGTCTTTTATTGACTCCTTTCGCCGGTTGATCAACCTTTTGATTTATTGTTGATAACTGATGATTTTGAGCAAGGGAATTTTCAGTTTGCCAGTTGAGGATATTTTCTGCTTGGCTGAGCTGGATTGGGTCAGAAGAGCCTACTGCTGCAGAGAGAATCTTAGGGATGTGAGCAATGTCGTCTTTGATGAAATCTTCTTGTGGAAGGAAATTACTTGGGCTGATCATCAATACTTCATGTGATGGTTCATTCCTCTTGTCAGAGTACTCGACAATAAAGTCATACTTGTCATCTCCAAGTGGACCAATGAAGGATCTCCTTCAAGATACCTTTGTAGAGGGTCCTTTTCTTTCGCCTTCGACTTCGCTCGCCATCGGATTCGAGCTCCGAAAGCGCCCGAGCAAGCGGTGCAATTGCAAACGTCAAAACGGCAATGCCCATCTTCATCTATAAAAGGATAGATTATTTCTCAATTTTTGCCGAACTGACAAGGTTTGGGGATATCTTGTTTCTTTGCTGGGCCGTAGAAGTCTCGTTCATCAACTTGGATTGCAAATTGAGTGAACAATTGTTTTCTGAAAGACGACGATCTTGGTTTTTCAAACTTGATCTCGGTAGCTCCATCTTTGAGTGAATGAAAGCTGACTTCCAAGGATTGAATTGGCGATTGAGTGGCTTGATGAAGCTTTTCATAGCTTGTTATCTAAGATTCTGGTAGACGACGTATCAGTTCTTCACGTGATATTTGGTGCGGAATTTGTATTGAATTTGGTGCCTGTGATGCTGACGTGACCTCGAGGTACAAGGCTTCATCGGATGAGGGTAGAACTAGATCGAGCGTGATTTTGGATTCGGTAGAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

566

Start:

3095090  

End:

3095655

Strand:

-

>ChrB01_LTR-Caulimovirus_10

TTCTTCACGGATATTTGGTGCGGAATTTGTATTGAATTTGGTGCCTGTGATGCTGACGTGACCTCGAGGTACAAGGCTTCATCGGATGAGGGTAGAACTAGATCGAGAGCGTGATTTTGGATTCGGTAGACGATCTGATGATGTAAGGTAGCTGCGATACTTTTTTCTTGCATGGGTGCTCCGATTAATTGTAGTTGGACCTTGAGCGTCTTCAGAAGATTTGGATCTTGTAACGAAACATTAAAGTTTGGAAACAATGTTACGAATATTGTTCCTGCATTTAGTGTTGTTTGAACTGTTCCGATGCACGCCTGTTGGTATGACTTTAACCGAGAGTCGATTAAAGCTATTCGAGCTATGACTGGTAGACCTTTTCTGGCGTGTAAGGTCAGACCAATTCTTACCACACCAAAGTGAAGATGAGTGTAGCTTTGCTGCTGCCATAATCTTGGTAGGTGTTCCGGAATGTTTAAAGATATAAATTGTTCTTCTTCGGTGGCTGGTACTTGGCAAGATGAGAACTTGCTGGATTGGACATATTCCATAACCTTCCGGTTTGAAGATGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

352

Start:

3095660  

End:

3096011

Strand:

-

>ChrB01_LTR-Caulimovirus_11

ATGAGTTCACGAACACCTTTAACAGAGAAGGCGCTAGGCTTTTTTGCAAAATATTCATATGGATTTACCAAAGGAAGGGTAGTTTCGGGTAACTCATCGCCCGAAACATACTCTATTTCATAAAGGGAATTTATAATGGAAGAGGAAGAGCGGTTTTTACTTTTTGGAAGGGTGGAGATTGCAAATTGGGAATCAATAGATGAGATTTGAGAGCTAGGCATTTGAGAGAATTGTTTTCCAAAATTCTTAAAATAATCAATCATAAACAACAATTCTATCCATCATGACGCAAGATGAAGGCTCTGATACCAGATAAGCTATCATGAATCGATTTAGTCGTGTTGACAAAGTC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

753

Start:

5898305  

End:

5899057

Strand:

-

>ChrB01_LTR-Caulimovirus_12

TTTTCCAAGAGTTTCGAGCAGGTTTGACATTGAAAATTTGATAATTCCAATGTGTTTTCCGTTATTTTTATTCTCTTCAACAGATTCGTGACTAGATGATGACATTAGAGCTGGAGCCTGTCTTTTAGTCTGGTTGGTCTGGAATTCTGATTCCTTCTGTCGCCTTGGCTTTGTTCGGGTCGGTTTTTCTCTTTTGTAGCCAGCTGAAGTTGAACCATAGCGAGATGTAAAGACTTCATCAGAGGATAGAAAACCAGTTAGTGGGGATCTCGTCTTTGGAGTTTGGTAGCTCAAGAGAAATCCAGGAGACTAGGATCTCTGATACATCGGCATTCCTGATGCACTTCTAAGAAGATTAAAGTATGAATCAGATTGTCGCTGGTTATGAACCATACTTTCAAGGCTTCTTTCGAGATATTTTAACTGTTTTTTTAGGCTAGCGGTCTCTGCTTCTTTGTTGCGGAATTGGGTAGTTCCTACCATCATGTGTGTGCCATTGACGTCATTTGTTGATGGAGGTTGCTGAGTCGATTATGTATTTCTGTTATCGAACTTTGAAGGCTTTGTAATCTCTCATTTTATCTTTCCGCCAGTCGATCGACGTCAATTTTGAGCGAGAGAATTCTCTGTCTGTCATTTGAGGACCTTCTCTGGTTGACTTAGTTGGTCGGGGTCGGAAGAATTGACAGCTTTAGAGAGAAATTTTGGGATATGAATGATGTCTTCCTTGATGAAATCTTCTTGTGGAGGGAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

627

Start:

6008089  

End:

6008715

Strand:

+

>ChrB01_LTR-Caulimovirus_13

TTTTCGCTACCAGTCCATCATTCTATCCAAACATGGAATCCACAACCACTACATCCAACCTATGGGAGTCCATCCAGACTATCCATTAACCTCTACCAGTCGAGACAGCCAACATGCTGAAGAAGTTCTCTGTTTCCTGCAGTACCTGCGCCGACTGCTACATAGAGTATTACCTTTGATATTTCATGGTTATACCAATACATCAATGAGCAGTTCACCAACCGCAGCTAGGACACAAAGAATGCCTATCAGCGTTCTTAACCTGGTTAGCACCACTCACCACTTGGAATGGTAGCTTCGCCAAGTCAGCCAGCGGCAGGCTTGTCCTTGAAGTTGAAGACTTCGAGGAGGTCCCAACCCGTTCTTCAATCCACACACCACATACTTCTTTCCGCCATCTGTTCGGGTAGCGACAAAGCAGAAGGTCCATACCAACTCTCATACATCACAAAGACTACCAGCGGGAGTCGGCCAGACTTCAATCTGAATGACATCGAGCTATCGAAGAATTCCAGATCCATGCATTCCGTCTCCAGCGGTGCCACCCAGATGTTCCCAATCCGTTTGTTCCTAATTGGATATACTATCAATCGATTATCAAATGGAGCTTCGATGAAGATCTTCAGT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

358

Start:

6008922  

End:

6009279

Strand:

+

>ChrB01_LTR-Caulimovirus_14

GTACGAATGCCCGGATGATCATTATGGATGCTGCGAGAAACACATTATCGAGTTGAGATAGACCACTGAATAAGCAGCGTACTAAGTATGTTTAATAATGTAAAATAAGTGTGTTTTATAAAATAAAGAATAATGATGTAAGCATTACGTAAGCGATGATGTAATCGCATAAGTAAGCATGATGTAAGCGATGATGTAATCGCTATAATGGCTGAGGTAAGCGCTTATGTCAGCGACTTATCCTCCCATAAATATGTGTGTACCCCATTGTGAAATATCATCAAATAATTTCCTAAAACCTCTCTCTAAGTTTCTCTCTATGTTTCTCTAAAGTTCTCTAGTTTTCCAGATCTTATCT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

105

Start:

6009503  

End:

6009607

Strand:

-

>ChrB01_LTR-Caulimovirus_15

GATCGTGTTGACAGAGTCTTATTGACGATCGAAGGGTTCGGCGATTTTCCAGGTAAAGGGAGCAATATTGGCACCTCTACGGCCTGGCTCAACCACTGTTAGGAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

354

Start:

6009733  

End:

6010086

Strand:

-

>ChrB01_LTR-Caulimovirus_16

AGATAAGATCTGGAAAACTAGAGAACTTTAGAGAAACATGAGAGAAACTTTAGAGAGGTTTTAGGAAATTATTTGATGATATTTCACAATGGGGTACACACATATTTATAGGGGAGGATAAGTCGCTGACATAAGCGCTTACCTCAGCCATTATAGCGATTACATCATCGCTTACATCATGCTTACTTATGCGATTACATCATCGCTTACGTAATGCTTACATCATTATTCTTTATTTTATAAAACACACTTATTTTACATTATTAAACATACTTAGTACGCTGCTTATTCAGTGGTCTATCTCGAACTCGATAATGTGTTTCTCGCAGCATCCATAATGATCATCCGGCATTC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3752

Start:

6010300  

End:

6014051

Strand:

-

>ChrB01_LTR-Caulimovirus_17

ACTGAAGATCTTCATCGAGCTCCATTTGATAATCGATTGGATAGTATATCCAATTAGGAACAAACGGATTGGGAACATCTCGGTGGCACCGCTGGAGACGGAATGCATGGATCTGGAATTCTTCGTGATAGCTTCGATGTCATTCGATTGAAGTCTGGCCGACTCCTCGCTGGTAGTCTTTGTGATGTATGAGAGTTGGTAGGGTATGGACCTTTCCTGCTTTGTCGCTACCTGAACAGGCGATGGAAGTATGTGGTGTGTGGATTGAAGAACGGTTGGGACCTCCTTGAGTCTTCAACTTCTTGAAGGACAAGCCCGCCGCTTGGCTGACTTGGCGTAGTTTACCATTCCAAGTGGTGAGTGGTGCGAACCAGGTTAAGAACGCTGATATGCATTCTTTGTGTCCTAGCTACCGGTTGGTGAACTGCTCATTGATGTATTGGTATAACCATGAAATATCAAAGGTAATACCTATAGTGTAGCTTATGCAGAGGTACCGTGAGGAAACAGAGAACTTCTTCGCATGTTGGCTGTCTCGATTCTGTAGAGGTGTGCGAATGGATAGTCTGGATGGACTCCCATAGGTTGGATGTAGTGGTTGTGGATTCCATGTTTGGATAGAATGATGGACTGGTAGCTAAACATCTTGTTACGAGATGTTCATGCGATGTCGTTTGTTGATGAGCTCTTGGGTATCTTCGGCATGTTGGTTGAGAAGTTATAGTAACTCTTTTCAGATGAGCCTTCCATCATATGTATTTCTTTTGTTGGGTTTCTGCTGAGCATGTCTGCGAGTGTTCTTGGATCCCTTTAAATGACGGACTCGAAATCGTGCCGAAAACCACTCGCTCCATCTTAACAATTGCTGATGTGGGACCATCTTTTGCTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTCGATCGCGAAATTTATGTCCTATCGGATGGAACTCGAACTTCTCGATTGCTTTCTTTACCGCCAATATCTCTTTGAGCGTGGAGTGATAATGCATTTCGAATCTTTAAAGCGACCATACGTATCCGCAGATTTGACGTTTTCATTTATTTCTTCAAATAAAATAGCTCCCAATATTTGTCACTCGCGTGGGTTTAGGTATGTGCACGTGGAAGGAATCTTTAAAGGTGGTAGCTTCGAACCTCTAGTTTTAGGCTTTTGACCGCCTCGGTTTGTCGGTTTGCCCACTGTGGTGGATTCTTTGTCAGCATTTTACGTAGCGGTCTCGTCGGTAGCGAAAGGTCGCGGGATAAAGTCACTCACATAATTGATTACACCAAGGAATTGCTGAATTTGTCGCTTTGTGAGATTTTCGTCTGGGAAATCAAGGAGCGTCGTGGCAAGATGGGCCTGTGGTGAGAAGTTGCCTTCTTTAATTTGCATTCCAAGAAAATCGATGTTGGGCTGGGCTATGACCATCTTACGGGCCGAGAGCATAACTCCGAATTTCTTCACAATACTCTGGAATTGTTGAAGGAGTTGAACGTGATCCTTTTCATTTGACGAAAATAACAGGATATCGTCGATATATATCAAGGCTGTGTGAAGTAGAGGTTTGAATATACGAAGCATCGCTTGTTGAAACAGAGATGGTGCGGTTTTGAGACCGAACGGTAAGACATTCCACTGAAGGTGACGGTTTGGGAGACAGAAAGCAGTCTTGTACCTTTCGTCAGGGTGAACACCAAGTTGCCAAAATCCGGATTTAAGATCGAATTTTGAGAATATAGTTGCTCCTTGCAAATGTTGGAGGAGTGCTTTTTTATTCGGCAACGGGAACTTGATGTCTTGTAGGTATTGGTTGAGTGGCTTGTAGTCAATGACTAGCCTGAGTTTTCCTCTTGCTTGTTCTGCACGGTTGTTGACGTAGAATGCTTTGCACACCCATGGGGAATTTGTTGCTGAGACTATTCCTTGGGTTACCAACTGGTCGCATTCATCGTTTGCTTGCTCTAGTAGAGTTGGTGGCATTCCAGCATGACTTGCTTTAGTTGGTGTAGTGAGAACATTCTCCTTGAATGGCAATGAAACGAAGAATTCGGAATTTAGCCATAGGGGGTTGCTACATTTCTGGAGGAAATCTGTGTGTGATTCTGCACACGATGTTGTAGTCATCTCTTCTTTGATCTTCGCGAATTCTTGAGAAATCTTCTCTTCTACTGCGAAGAGACGTGGGATTGTTGTGTAAGCTTTGAAAGAGCCTTTCCATCTTAATCCTCGTAACTCAATTGAAATGTCATAAGCCCTTTTGAAGGCGTGATATGAATCCCATCCCAGAATTAAATCTTTTCCTGGTGCTGTAGAACCAAGTACTTGAGTAGTGATGCAACATCCTGGGAAAATCTCGATCGTTATCGGTTTAGACTTGAGCTTGATGGTTAAAGATCCAGAGTTTGCAACACGGAACTCCTGTTGATGAGGTAGCCACATAGACGGAGGTAAGATTTTTGGATTTAGTATAGTGGAATGAGCTCCTGTGTCTATGAATGCAATGACATGAACCGGATCTTCTTCACCAGATGGATCGAGGATGGTTACTGGCAGATGTGGGATCTGTATCTCGTCTTGTTTTGGCATTTTTGTAATTTTGAAGCAACAGTCTTCTTCTTCATCTTGAGATGACTCGGATGAATCGTTATAATCTGAGTAGCCACATATAGCGTCGTTGTCGCCGCTGTCATAGGATAAAACAGACTCTAAGTCATGGCCTTGAGATCTAAGTCGGTCGCGATCTCGAGATTGAATTGATCAGATATTGCTTCTTTTTGCGGACTTGTTTGGACAATTCTTAGCGTAATGCCCTTCTCTTCTGCATAGAAAGCATTTCGTTGACTTCTTGAAACTCCTTTTCTTAGGAAAAATCCTTTACGTCTGAATTTGGAGGAATGCTTAGAGAAACGCCTCTTGAATTTTAAATAAACTTCTCATGATTGTCGCAAGAACACGATTTCTTGGACTTTGAACACTTGATTGATAGATCTGGTCTTGCACATATCTTCGTTAATTGTTTCGATCTATCCATGAATTCCATCCAGAACTCCTTTTGTTTGCAGAGCTTATCGAGCGTTCTGAAAACGTACTGTTGGATCTGACCAATGGAAATTTCTTCAATGGTTTGACCTTGATCTCTGATGTACAGCTTAGTCTGCTGACTCAGATAGTCATCGATGGAAGAGAGATAGACGTGCTTGAGGCTTGCATTGTTGAGGCGTTGAGGCGTAATATCTTAGTGTCTGTCTTTCAAAATGTTTAGCGAGATCCTTCTTTTGTAGAGAACAACATTTTGCAGAGAAGAACTCTTCTTGTATCTGTTCTTTTTGGTGCGTGGGAGTACCGATAAATTCTCTGTGAATTTCTCCGAGAAGCAACGGTATTGTTGTTTGATAGACTTGATGTTGTCTATATTCTCCGAGTGAGTTCCACCATTCTTTGAGTGCACCAGATAGTCTTGCAGTGAATTGCTGAATTACCAAATGCAGTGGGGATGTGATGGCTTCAGAACTCATCCATGCATGGAATTCATCTAGACGATCATTCCATTTGTTGAAAGGAATGTCATCAAATGTGAAGACCATAACCTTCGAAGAAAAATGCCTATTGGGCATTTCTTGTTGAGCAGGCTCAAAATTCATTTCGTCACCGCTTGAGTTGATTTCATTGATGCTTGGTTCTTGTTTAGGAGCGCTGGAAGTTTCACCAATTGCAAATTGCTTTGGTAGTGATTCGTC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1858

Start:

6014180  

End:

6016037

Strand:

-

>ChrB01_LTR-Caulimovirus_18

CAAGGGTGTTGAGGAGACTTGTCATCGAGAATTCGATAATTCCGATATCGTGTCCTTTCTTCTTTTCGTCGACTGATTCGTGACTAGAAGACGACGTGAGAGCTGGGGCTTGTTTCTTGAATGGGCTGTCTTGAAATTCCGAGTCTTTTTGACGTCGGGATTTTGATCGGACTTGTTTTGTCTTTGGATATGCAGCTGAAGTTGAGCCATAACGAGATGTAAAGATTTCATCAGAGGACAGAAAACCCGGTAGTGGAGTTCTTGATTTTGGGGTTTGATATCCTGATAGAAATCCAGGAGAGTAGGATCCTTGATACGTCGGTATTGAGGCACTTTCAAGAGGATTGAAATATGTATCTGATCGTCGCTGATTGCGAACCATGCTCTCGAGGCTACTTTGGAGATCTTTCAGCTGATTTTTTAGGCTGGCCGTCTCTGCTTCTTTGCTGCGGAATTGATTAGTATCTACCATCATGTGTTTCGCCATAGACATCATTTCTTGATGGAGATTGTTAAGCCGACCATGTATTTCTGTGATGGCTCCTTGGAGACTTTGGAACCTCTTATTATAGCTATTTGCTAGTTGATCAACCTTATTATTGATTGTTGATAATAGCCTATTTTGGGCGAGGGAGTTCTCGGTTTGCCAATTGAGTACTTTTTCTGCTTGACTCATCTCGTCAGGACCCGAAGGATTGATGGCTTGTGAGAGAATCTTTGGACAATGAGCGACGTTTTCCTTGACGAAGTCTTCTTGAGGAGGAAAGTCGTTGGGATTCATCATCATGATTTGTTGTTTAGTTTCTTCCTTTTGGCTAGAGTATTCGACTATGAAGTCGTACTTGCCATCCCCAAGTGGACCAACAGTAGGATCTCCTTCTAGGTACCTTTTGTAGAGAGGGTCCTTTTTCTTTTGTCTTCGCCTTCGTTTTTCATCATCAGATTCATCGTAAGCTTCTGAACAGGCGGTGCAGTTGCAGATGTCAAAGCGGCAATGTCCGTCTTCATCAATAAAAGGATAGATTATTCTCCCATCTTTGTCAAATTGAAAAGGTTTCGGGATGTCTTGTTTTTGTGCTGGGCCGTGGAAGTCTTCTTCATCGACTTGGATGGTGAATTGTGTGAACAATTGTTTTCTGAAAGAAGACGATCTTGGCTTTTCAAATTTGATCTCCGTCGTTCCATCCTTTCGAGAGTTAAAGCTGACTTCTGAGGATTGTATAGGAGATTGGGTAGCTTGATGAAGCTTCTCATAACTCGTCACCCATGATTCTGGCAATCGTATGAGTAGTTCTTCGCGAGAGATCTGCCGAGGGATTTGTATTGAGCTAGGCGCTTGAGATGCAGATGAGACTTCGAGGTATAGTGCTTCATCTGATGAGGGTAAAACAAGATCAAGAGCGTGATCTTGAATCCTGTAAACGATTTGGTGATGTAGCGTGGCTACTACACTCTTCTCTTGCATAGGTGCTCCGATTAGTTGAAGCTGAACCTTGAGCGTCTTCAACAGATTTGGATCTTGCAATGAGACATTAAAGTTTGGAAACAGTGTAACGAATACTGTTCCTGCATTTAATGTTGTCTGAACTGTTCCGATGCAAGCCTGCTGGTATGACTTTAATCGGGAGTCGATCAACGCAATTCGGGCTATGACAGGTAGACCTTTTCTAGCATGTAAGGTCAAGCCAATTCTTACTACACCAAAATGAAGGTGAGTATAGCCTTGCTGCTGCCACAATCTGGGTAAGTTCTCCGGGATGTTCAAAGAAATGAACTGCTCTTCTTCGGTGGCTGGAACTTGACAGGATGAGAATTTGCTGGATTGGACATATTCCATCACCTTTCGGCTGGAAGATGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

402

Start:

6016042  

End:

6016443

Strand:

-

>ChrB01_LTR-Caulimovirus_19

ATGAGCTCGCGAACTCCTTTGACGGAGAAGGCGCTGGGTTTTTTTGCGAAGTATTCATATGGGTTTAGTAGGGGAAGGGTAGTTTCGGGTAATTGGTCGCCCGGAACATATTCGATTTCATATAGGGAATTTATATTAGAGGATGATGAACGGCTTTTATTTTTGGGTAAAGTTGAAATAGCAAAAGGAGAATCAATTGAAGTAGGATTTGAGGTAGACATCATAAGGAAATTGTTTTCCAGATTTCTTAAATCAATCAGTGATAAACAATGATTCTATCAACCCTTTTCGCAAGACTATAGGCTCTGATACCATTATACTATGCACAGATACGGAGATGTCGATCGTGTTGATAGAGTCTTATTGACGATCGAAGGGTTCGGCGATTTTCCAGGTAAAGGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Caulimovirus_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

433

Start:

7457068  

End:

7457500

Strand:

+

>ChrB01_LTR-Caulimovirus_20

AATTATGTATAATAAGTGTGTTTAAAATAATGATGTAAACGCTGTAAATTTATGTAAGCATGATATAAGCGATGATGTAATCTCTGAAGTAAACATTTATGTCAGTGTACGTATCCTCACCTATAAATATGTGTGTATCCCCCTATTTGTGAAATAACATCTCATAATTTAATTATAAAAACTCTCTCTAAATTTCTTTCTCTAAAATGTTTTTCTAAGATCATTAGTTTTCAAGACCTTATGACATCTTTGTAAGTGTTGATTTATATCTTCCATTTGTAAGTCGCGATTTCTGCCTGTTGCTTAGATATATATATAAGCGGTTTTATCAACACGAATTTGTCCAAACGACTTTCGTGGGGTATATTTCCTAACAGTGGTTGAGCAAATCAACGGCTAGAGTAGTGCCTATATCGCTCCTTATATATGGAAT