Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1883Start:
2208929End:
2210811Strand:
->ChrB01_LTR-Caulimovirus_1
ATTTATTTTACATAATTAAACATACTTATTTTAGTCACCGCTTAGTTAGTGGTCGATCTCGAATTCAATGATGTATTTGTCGCAGCATCCGTAATGATCGTCTGGACATTCATACTCTTCTTCTGGTTCTTCGTGAGTTTGCGGACATTTTTCCTACTTCATCTATATTCATTGAGTCATCAGAAAGTTGTGCATCTTGGAAGTATTCTGGTGGGCATTCTTGAGATTGTTGCTCCGGCTTCGTCGTCTTCGAGATTTCTGGAATATCTATTGGTTTTTCCCATTTTTCTATGAAGAACTGAAGATCTTCGTGGAGGCTCATTTGGTAGTCGATCGGATAGTAAGTCCAATTTGGGGTGAAAGGTACAGGGAGGTTTGTTTGGCGCTATTGAGACGAAATGCATGGGTCTGGAAGTCTTCGTACGCTTTGTTGTCGTTGATGTTGAAGTCTGGTCTGACTTTTTGTGGATAGTCATTGTGATGAATGAGGGTTGGTAGAGCATGGATCTTGTTGGTCTTGTTGTTTACTTGAACATAGCGATGGAAGAAGTATATCGCGTGGGGATTAAAGAAAGGGTTGAGACCTCCTTGACCTCTTAACTTCTTGAAAGATAATCATGTTGCTTTTGCTGACCTTCGTAGTTTTCCGCTCCAAATGGAAAGTGGAGCGAACTAAGACAAGAACGTCGAGAGTCTGTTCTTGTGTCCTGGCTGGGAGTCGGTGAACTGAGAGTTGACGTATTGGTATAACCATTGGATGTCAAAGGTTATGCCTATAGTGTAGATAGAACAGAGATACCAGGCGAGCGCTTTCGATCCTGTAGAGATGAGCGAACGGGCAATCGGGGTGAATTCTCGTCAGATAGATGATGAGATTCCAGACTCCGTATTTTGACAGGATGATGGACTGATAGTAGATAATTTTATCGCGGAGGCATTCATGTAGAGCATTTCGGTCGATAAGTTTGTGAGCGTCGTCGAGCATGTTGGATGCGAAATCATAGTAACTTTTTGCTGAAGAGCTTTCCATCATTTGTATGTCTTTTATTGAGTTTCTACTGAGCATATCAGCAAGTGTGTTCTTCGAGCCCTTTAAATAGACAGATTCGAAATCGTACTTCGAGAACCATTCGCTCCACCGTAATAATTGCTGATGTGAGATCATCTTTTGCTTGAATTGTAACATCTTTGGGAAATATGAAATATCCATTTCAATTCAAAATTTATGTTCTATCAGATGAAACTTAAACTTCTCAATAGCTTTCTTGACCGCTAGTATTTCTTTGAACGTGGAGTGATAATGTATTTCGAAATCTTTAAAGCGTCCATTTTTGTATCCACATATTTGACGTTTCCCATTTATTTCTTCAAATAAAATGGCTCCCTAATATTTGTCATTTGCGTCAGTCTGCAAAATGCGTGTGTCTGTGGAAGAAATCTTTAAAGGCAGTAGCTTCTGCACCTCTATTTTTAGGCTTCCGACAGCTTCTGTTTACCGGTTTGTCCATTGCGGTGGATTTTTTGTCAATATCTTCTGTAACGGTTTTGTCAGTCGTGAAAGTTGCGATATAAAATCGTTAACATAATTGATTACACTAAGGAATTGCTGCATTTGTCGTTTTGTGAGATTTTCGTCAGGAAAATCGAGAAGTGTTGTAGTAAGATGGATTTGTGGCGAAAAATTTCCGTTTGTAATTTGCATTCCAAAGAAATCGATGTTGGGCTGGACTATAACCATTTTTTGGGGCGAGAACATAATTCCATACTGATTGATAATACTTTTAAACTGTTGAAGAAATTTAATGTGTTCCTTCTCATTTGATGAGAATAGAAGGATATCGTCGATATATATCAAAGTCGTATGGAATAGAGACTTGAATATA
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
418Start:
3076380End:
3076797Strand:
+>ChrB01_LTR-Caulimovirus_2
TTCCTAACAGTGGTTGAGGTCGATCTAAAGGCCGTGGGGGTGCCTATATCGCTCCCTTTACCTGGAAATCTCCGATCTCGTCTGTCAACACGACTTTGTCAACACGACTAAATCGATTCATGACAGCTTATCTCGTATCAGAGCCTTCATCTTGCGTCATGACTGATAGAATCGTTGTTTATGATTGATTATTTTAAAATTACGGAAAACAGTTCTCTCAAATGTCTAGCTCTCAAATCTCATCTATTGATTCCCAATTTGCAATCTCCACCCTTCCAAAAGCAAAAGCCGCTCTTCCTCTTCCACTATAAATTCCCTTTATGAAATAGAGTATGTTCCTGATCAGTTACAAACTACCCTTCCTTTGGTAAATCCATATGAATATTTTGCAAAAAGCCTAGCGCCTTCTGTTAAAAGT
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
335Start:
3076814End:
3077148Strand:
+>ChrB01_LTR-Caulimovirus_3
CCATCTTCAAACCGGAAGGTTATGGAATATGTCAATCTAGCAAGTTCTCATCTTGCCAAGTACCAACCACCGAAGAAGAACAATTTATATCTTTAAACATTCCGACACCTACCAAGATTATGGCAGCAGCAAGGCTACACTCATCTTCACTTTGGTGTGGTAGAATTGGTCGGCCTTTGCGAGAAAGGTCTACCAGTCATAGCTCGAATAGCTTTAATCGTCAATTAAAGTCATACCAACAGTGCATTGGAACAGTTCGGACAACACTAAATACATGAGTATTATAACACTATTTCCAAACTTTAATGTTTAGTTACAAGATCCAAATCTTATGA
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
352Start:
3078017End:
3078368Strand:
+>ChrB01_LTR-Caulimovirus_4
GACTTTGTCAACACGACTAAATCGATTCATGACAGCTTATCTCGTATCAGAGCCTTCATCTTGCGTCATGACTGATAGAATCGTTGTTTATGATTGATTATTTTAAGAATTCTGGAAAACAGTTCTCTCAAATGTCTAGCTCTCAAATCTCATCTATTGATTCCCAATTTGCAATCTCCACCCTTCCAAAAAGCAAAAGCCGCTCTTCCTCTTCCACTATAAATTCCCTTTATGAAATAGAGTATGTTCCGGGCGATCAGTTACCCGAAACTACCCTTCCTTTGGTAAATCCATATGAATATTTTGCAAAAAAGCCTAGCGCCTTCTCTGTTAAAGGCGTTCGTAAACTCAT
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1562Start:
3078373End:
3079934Strand:
+>ChrB01_LTR-Caulimovirus_5
CCATCTTCAAACCGGAAGGTTATGGAATATGTCAATCTAGCAAGTTCTCATCTTGCCAAGTACCAGCCACCGAAGAAGAACAATTTATATCTTTAAACATTCCGGAACACCTACCAAGATTATGGCAGCAGCAAGGCTACACTCATCTTCACTTTGGTGTGGTAAGAATTGGTCTGGCCTTACACGCCAGAAAAGGTCTACCAGTCATAGCTCGAATAGCTTTAATCGACTCTCGGTTAAAGTCATACCAACAGGCGTGCATTGGAACAGTTCAGACAACACTAAATACATGAACTGTATTCGTAACACTATTTCCAAACTTTAATGTTTAGTTACAAGATCCAAATCTTATGAAGACGCTCAAGGTCCAACTACAATTAATCGGAGCACCCATGCAAGAAAAAAGTATCGCAGCTACCTTACATCATCAGATCGTCTACCGAATCCAAAATCACGCTCTCGATCTAGTTCTACCCTCATCCGATGAAGCCTTGTACCTCGAAGTCACGTCAGCATCACATGCACCAAATTCAATAAAAATTCCGCGCCAAATATCACGTGAAGAACTGATACGTCGTCTACCAGAATCTTGGATAACAAGCTATGAAAAGCTTCATCAAGCCACTCAATCGCCCATTCAATCCTCAGAAGTCAGCTTTCATTCACGCAAAGATGGAACTACTACGATCAAGTTTGAAAAACCGAGATCGTCGTACTTCAGAAAATAATTATTCACTCAATTTGCAATCCAAGTTGATGAACGAGACTTCTACGGCCCAGCAAAGAAACAAGATCCCCAAACCTTGTTAGTTCGGCAAAAATGGAGAAATAATCTATCCTTTTATAGATGAAGATGGGCATTGCCGTTTTGACGTCTGCAATTGCACCGCTTGCTCATACGCTTTCTAGAGCTACGAATCCGATGACGAAAAACGAAGTCGAAGACGAAAGAAAAAGGACCATCTCTACAAAAGGTATCTTGAAGGAGATCCTTCAGTTGGTCCACTTGGAGATGACAAGTATGACTTTATTGTCGAGTACTCGGACAAGAGGAATGAACCATCGCATGAAGTACTGATGATCAACCCAAGTAATTTCCCTCCACAAGAAGAGTTCATCAAAGACGACATTGCTCACATCCCTAAGATTCTCTCAGCAGCAGTAGGCTCTTCTGGCCCAATCCAGCTCAGCCAAGCAGAAAAGGTCCTCAACTGGAAAACTGAAAATTCACTTGCTCAAAATCATCTGTTATCAACAATAAATCAAAAGGTTGATCAACTGACGGAATGGGTCAATGAAAGACAACATATCCTTCAGAACTCAATAACAGAAATACATGGGCGACTCAATAATCTTCACCAAGAAATGATGACGATGGCAAAACACATGATGGTGGACACAACTCAGTTTCGAAACAAAGAAGTAGAGACAGCCAGCCTGAAGAGTCAATTAAGAGATCTTCAGCGAAGCCTAGAAAGTATGATTCATAATCAGCGACAAAAGGACTCATACTTCAATCCCTTTGGAAGTACATCATCAGAAGTACCAATGTACCAAGGATC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
93Start:
3091369End:
3091461Strand:
+>ChrB01_LTR-Caulimovirus_6
ATCTTATTCTCCTGAATTTCTTTCTGGCTACCAAACCGAGAAGACAAGATCACCATTACCTGGTTTTCTATCCTCTGATGAAGTCTTTACATC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
110Start:
3091477End:
3091586Strand:
+>ChrB01_LTR-Caulimovirus_7
CTCCAAGACCTCAACTTTCCCCTAACAAACAAAAAGGCGCTTCTCCAACATCTTCAAGGAGCAACGATATTTTCAAAGTTTGACCTTAAATCTGGATTTTGGCAACTTGG
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1999Start:
3091572End:
3093570Strand:
->ChrB01_LTR-Caulimovirus_8
ATTTTGGCAACTTGGAGATGTTGGAGAAGCGCCTTTTTGTTTGGTAGGAGAAATTTGAAGTCTTGGAGAAATTGGTTTAGTGGCTTGTAGTCAATGACTAGCCAGAGTTTCCTCTTGCTTGTTCTGCACGATTGTTGACGTATAATGATTTGCATACCCACGGAGAAGTTGTGTTAGAGACTACTCCTTCTTCTACTAACTGATCGCACTAGTCATTTGCTTGTTTTAAAAGAGTCAGTGGCATTCCTGTGTGGCTTGCTTTTGTTGGCATAGTGAGAACGTTTTGTTTGAACGGTAGTGAAACAAAGAACTGGGAGTTTAGCCACAACGGTTTGTCGCACTTCTGAAGGAAATCTTTGTGGGATTCCGCACAGGATGTTCTCGTCAATTCTTCTTTAATTTTTGTACACTCTTGAGAGGCCAATTCTTCAATCGCAAAAAGTCGTGGGACTGCTGTGAAATCTTTGTAGAAATTCTTCCACCGTACGCCTCGAGGTTCGATTGAGATATCGAAGGATTTCTTCAGAGCATAATACGAGTCCCATCCCAATATTACGTTTTTGCCTGGCGCCGTTGATCCAAGAACTTTAGTCGTAATTCAGCATCCGGGGAAGAGCTCAATTGTTATTGGTTTTGATTTGAGCTTGATGGTTAATGATCCGGAATTCGCGACACGGAATTCTTGTTGGTGAGGTAACCACACAGAAGATGAGAGAATCTTAAGATTTATTATCGTTGTGTGGGCTCCAGTGTCTATGAATGCGATGGCATGGACTGGGTCTTCTTTACAAGCTGGATCAAAGATTGTCACCGGTAAATGCGGGGGTTGTATTTCGTCTTGTTTCGGTATTTCGGTGATTTTGAAACAGCAGTCTTCATCTTCATCTAGAGATGATTCATAAGAGTCATCATAATCTGAGTATCCACAAATGTCTTCGTTGTCATCACTATCGTAAGATAGAACTGACTCCAAGTCATGGTTGTCAAGGTCAATGTCTGGTGCAATCTTGGATATCGAGTTGATTAGATATTGCTTCTTTTTCTTCGATTTGTTAGGACAATTTTTGTGTCCTTCTTTTCGACATAGAAAACACCTGGTTGACTTCTTGAAGCTTCTTTTCTTTCGAAAAAAACTTTTGCGTCTAAAGTTAGGAGAATGTCTGGAAAAACGCTTTTTGAACTTCTTGCGCTTACCATAAGAATCGCAAGAAAAGGGTTTCTTGGATTTTGAACACTTGATTGATAGGTCTGGCCTGGCACATATTTTTGATAATTGTTTTGAACGATCCATGGACTCCATCCAGAACTCCTTTTGCTTGCAAAGTTTATCGAGCGTTCCGAAGACATATTGCTGGATTTGACCAATGGAGATTTCTTCGATCGTTTGGCCTTGATCTCTGATCTATAATTTTGTTTGCTGACTAAGATAATCATCAATAGAGGAGAGATAGACATGCTTCAAGCTTGCGTTGTTGAGGCTGTTAAGAGCATAGTATCTTCTTGTCTGCCTTTCAAAGTGTTTTGCAAGGTCTTTCTTCTTTAATGAACAACATTTAGCTGAGAAGAAATCTTCTTGTATTTGCTCCTTTTGATGTGTAGGTGTACCGATGAATTCTCTGTGGATTTCTTCTAGAAACAATGGAATTGTTGTTTGATAAACTTGTTGCTGTCTGTATTCTTCGAGGGAGTTCCACCATTCTTTAAGTGAGCCGGATAGTCTCGCCGTGAATTGTTAAATTACTAGATGCAGGGGAGACGTAATCGCTTCTGAATTCATCAATGCATGGAATTCATCCAATCGATCATTTCATTTGTCGAAGGGAATGTCGTCGAACGTAAATACCATGACTTTTGAAGAAAAACGTTTATTAGGAATTTCTTCTCTCGGAGCTGCATAATTCATTTCTTCATCGCTTGAGTATATTTTGTTAATACTTGGCTCTTTCTTAGGAGTACTTGATCCTTCACCAATTGCGAACTGCTTAGATAGAGACTCTTC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1413Start:
3093670End:
3095082Strand:
->ChrB01_LTR-Caulimovirus_9
TTTTCCAAGATCATTGAGCAGACTAGTCATCGAGAATTTGATAATTCCAATGCCCTTTCCTTTATTGTCAACTGAATCATGACTGGACGATGACGTAAGAGTTGGTCTTTTTGGTGGGTTGATCTGAAATTCAGATCCCTTTTTTCGTCTTGATTTTGATCTAGCTTGTTTTGGCTTTTCATCGAAGATTGAAGTCGAGCCGTATCTTGATGTAAAGACTTCATCAGAGGATAGAAAACCAGGTAATGGTGATCTGATCTTCTGGGTTTGGTAGCCAGAAAGAAATCCAGGAGAATAGGATCCTTGGTACATTGGTACTTCTGATGATGTACTTCCAAAGGGATTGAAGTATGAGTCCTTTTGTCGCTGATTATGAATTATACTTTCTAGGCTTCGCTGAACTCTTAAGTGACTCTTCAGGCTGGCTGTCTCTACTTCTTTGTTTCGAAACTGAGTTGTGTCCACCATCATGTGTTTTGCCATCGTCATCATTTCTTGGTGAAGATTATTGAGTCGCCCATGTATTTATGTTATGGAGTTCTGAAGGCTATGTTGTCTTTTATTGACTCCTTTCGCCGGTTGATCAACCTTTTGATTTATTGTTGATAACTGATGATTTTGAGCAAGGGAATTTTCAGTTTGCCAGTTGAGGATATTTTCTGCTTGGCTGAGCTGGATTGGGTCAGAAGAGCCTACTGCTGCAGAGAGAATCTTAGGGATGTGAGCAATGTCGTCTTTGATGAAATCTTCTTGTGGAAGGAAATTACTTGGGCTGATCATCAATACTTCATGTGATGGTTCATTCCTCTTGTCAGAGTACTCGACAATAAAGTCATACTTGTCATCTCCAAGTGGACCAATGAAGGATCTCCTTCAAGATACCTTTGTAGAGGGTCCTTTTCTTTCGCCTTCGACTTCGCTCGCCATCGGATTCGAGCTCCGAAAGCGCCCGAGCAAGCGGTGCAATTGCAAACGTCAAAACGGCAATGCCCATCTTCATCTATAAAAGGATAGATTATTTCTCAATTTTTGCCGAACTGACAAGGTTTGGGGATATCTTGTTTCTTTGCTGGGCCGTAGAAGTCTCGTTCATCAACTTGGATTGCAAATTGAGTGAACAATTGTTTTCTGAAAGACGACGATCTTGGTTTTTCAAACTTGATCTCGGTAGCTCCATCTTTGAGTGAATGAAAGCTGACTTCCAAGGATTGAATTGGCGATTGAGTGGCTTGATGAAGCTTTTCATAGCTTGTTATCTAAGATTCTGGTAGACGACGTATCAGTTCTTCACGTGATATTTGGTGCGGAATTTGTATTGAATTTGGTGCCTGTGATGCTGACGTGACCTCGAGGTACAAGGCTTCATCGGATGAGGGTAGAACTAGATCGAGCGTGATTTTGGATTCGGTAGAC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
566Start:
3095090End:
3095655Strand:
->ChrB01_LTR-Caulimovirus_10
TTCTTCACGGATATTTGGTGCGGAATTTGTATTGAATTTGGTGCCTGTGATGCTGACGTGACCTCGAGGTACAAGGCTTCATCGGATGAGGGTAGAACTAGATCGAGAGCGTGATTTTGGATTCGGTAGACGATCTGATGATGTAAGGTAGCTGCGATACTTTTTTCTTGCATGGGTGCTCCGATTAATTGTAGTTGGACCTTGAGCGTCTTCAGAAGATTTGGATCTTGTAACGAAACATTAAAGTTTGGAAACAATGTTACGAATATTGTTCCTGCATTTAGTGTTGTTTGAACTGTTCCGATGCACGCCTGTTGGTATGACTTTAACCGAGAGTCGATTAAAGCTATTCGAGCTATGACTGGTAGACCTTTTCTGGCGTGTAAGGTCAGACCAATTCTTACCACACCAAAGTGAAGATGAGTGTAGCTTTGCTGCTGCCATAATCTTGGTAGGTGTTCCGGAATGTTTAAAGATATAAATTGTTCTTCTTCGGTGGCTGGTACTTGGCAAGATGAGAACTTGCTGGATTGGACATATTCCATAACCTTCCGGTTTGAAGATGG
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
352Start:
3095660End:
3096011Strand:
->ChrB01_LTR-Caulimovirus_11
ATGAGTTCACGAACACCTTTAACAGAGAAGGCGCTAGGCTTTTTTGCAAAATATTCATATGGATTTACCAAAGGAAGGGTAGTTTCGGGTAACTCATCGCCCGAAACATACTCTATTTCATAAAGGGAATTTATAATGGAAGAGGAAGAGCGGTTTTTACTTTTTGGAAGGGTGGAGATTGCAAATTGGGAATCAATAGATGAGATTTGAGAGCTAGGCATTTGAGAGAATTGTTTTCCAAAATTCTTAAAATAATCAATCATAAACAACAATTCTATCCATCATGACGCAAGATGAAGGCTCTGATACCAGATAAGCTATCATGAATCGATTTAGTCGTGTTGACAAAGTC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
753Start:
5898305End:
5899057Strand:
->ChrB01_LTR-Caulimovirus_12
TTTTCCAAGAGTTTCGAGCAGGTTTGACATTGAAAATTTGATAATTCCAATGTGTTTTCCGTTATTTTTATTCTCTTCAACAGATTCGTGACTAGATGATGACATTAGAGCTGGAGCCTGTCTTTTAGTCTGGTTGGTCTGGAATTCTGATTCCTTCTGTCGCCTTGGCTTTGTTCGGGTCGGTTTTTCTCTTTTGTAGCCAGCTGAAGTTGAACCATAGCGAGATGTAAAGACTTCATCAGAGGATAGAAAACCAGTTAGTGGGGATCTCGTCTTTGGAGTTTGGTAGCTCAAGAGAAATCCAGGAGACTAGGATCTCTGATACATCGGCATTCCTGATGCACTTCTAAGAAGATTAAAGTATGAATCAGATTGTCGCTGGTTATGAACCATACTTTCAAGGCTTCTTTCGAGATATTTTAACTGTTTTTTTAGGCTAGCGGTCTCTGCTTCTTTGTTGCGGAATTGGGTAGTTCCTACCATCATGTGTGTGCCATTGACGTCATTTGTTGATGGAGGTTGCTGAGTCGATTATGTATTTCTGTTATCGAACTTTGAAGGCTTTGTAATCTCTCATTTTATCTTTCCGCCAGTCGATCGACGTCAATTTTGAGCGAGAGAATTCTCTGTCTGTCATTTGAGGACCTTCTCTGGTTGACTTAGTTGGTCGGGGTCGGAAGAATTGACAGCTTTAGAGAGAAATTTTGGGATATGAATGATGTCTTCCTTGATGAAATCTTCTTGTGGAGGGAA
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
627Start:
6008089End:
6008715Strand:
+>ChrB01_LTR-Caulimovirus_13
TTTTCGCTACCAGTCCATCATTCTATCCAAACATGGAATCCACAACCACTACATCCAACCTATGGGAGTCCATCCAGACTATCCATTAACCTCTACCAGTCGAGACAGCCAACATGCTGAAGAAGTTCTCTGTTTCCTGCAGTACCTGCGCCGACTGCTACATAGAGTATTACCTTTGATATTTCATGGTTATACCAATACATCAATGAGCAGTTCACCAACCGCAGCTAGGACACAAAGAATGCCTATCAGCGTTCTTAACCTGGTTAGCACCACTCACCACTTGGAATGGTAGCTTCGCCAAGTCAGCCAGCGGCAGGCTTGTCCTTGAAGTTGAAGACTTCGAGGAGGTCCCAACCCGTTCTTCAATCCACACACCACATACTTCTTTCCGCCATCTGTTCGGGTAGCGACAAAGCAGAAGGTCCATACCAACTCTCATACATCACAAAGACTACCAGCGGGAGTCGGCCAGACTTCAATCTGAATGACATCGAGCTATCGAAGAATTCCAGATCCATGCATTCCGTCTCCAGCGGTGCCACCCAGATGTTCCCAATCCGTTTGTTCCTAATTGGATATACTATCAATCGATTATCAAATGGAGCTTCGATGAAGATCTTCAGT
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
358Start:
6008922End:
6009279Strand:
+>ChrB01_LTR-Caulimovirus_14
GTACGAATGCCCGGATGATCATTATGGATGCTGCGAGAAACACATTATCGAGTTGAGATAGACCACTGAATAAGCAGCGTACTAAGTATGTTTAATAATGTAAAATAAGTGTGTTTTATAAAATAAAGAATAATGATGTAAGCATTACGTAAGCGATGATGTAATCGCATAAGTAAGCATGATGTAAGCGATGATGTAATCGCTATAATGGCTGAGGTAAGCGCTTATGTCAGCGACTTATCCTCCCATAAATATGTGTGTACCCCATTGTGAAATATCATCAAATAATTTCCTAAAACCTCTCTCTAAGTTTCTCTCTATGTTTCTCTAAAGTTCTCTAGTTTTCCAGATCTTATCT
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
105Start:
6009503End:
6009607Strand:
->ChrB01_LTR-Caulimovirus_15
GATCGTGTTGACAGAGTCTTATTGACGATCGAAGGGTTCGGCGATTTTCCAGGTAAAGGGAGCAATATTGGCACCTCTACGGCCTGGCTCAACCACTGTTAGGAA
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
354Start:
6009733End:
6010086Strand:
->ChrB01_LTR-Caulimovirus_16
AGATAAGATCTGGAAAACTAGAGAACTTTAGAGAAACATGAGAGAAACTTTAGAGAGGTTTTAGGAAATTATTTGATGATATTTCACAATGGGGTACACACATATTTATAGGGGAGGATAAGTCGCTGACATAAGCGCTTACCTCAGCCATTATAGCGATTACATCATCGCTTACATCATGCTTACTTATGCGATTACATCATCGCTTACGTAATGCTTACATCATTATTCTTTATTTTATAAAACACACTTATTTTACATTATTAAACATACTTAGTACGCTGCTTATTCAGTGGTCTATCTCGAACTCGATAATGTGTTTCTCGCAGCATCCATAATGATCATCCGGCATTC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
3752Start:
6010300End:
6014051Strand:
->ChrB01_LTR-Caulimovirus_17
ACTGAAGATCTTCATCGAGCTCCATTTGATAATCGATTGGATAGTATATCCAATTAGGAACAAACGGATTGGGAACATCTCGGTGGCACCGCTGGAGACGGAATGCATGGATCTGGAATTCTTCGTGATAGCTTCGATGTCATTCGATTGAAGTCTGGCCGACTCCTCGCTGGTAGTCTTTGTGATGTATGAGAGTTGGTAGGGTATGGACCTTTCCTGCTTTGTCGCTACCTGAACAGGCGATGGAAGTATGTGGTGTGTGGATTGAAGAACGGTTGGGACCTCCTTGAGTCTTCAACTTCTTGAAGGACAAGCCCGCCGCTTGGCTGACTTGGCGTAGTTTACCATTCCAAGTGGTGAGTGGTGCGAACCAGGTTAAGAACGCTGATATGCATTCTTTGTGTCCTAGCTACCGGTTGGTGAACTGCTCATTGATGTATTGGTATAACCATGAAATATCAAAGGTAATACCTATAGTGTAGCTTATGCAGAGGTACCGTGAGGAAACAGAGAACTTCTTCGCATGTTGGCTGTCTCGATTCTGTAGAGGTGTGCGAATGGATAGTCTGGATGGACTCCCATAGGTTGGATGTAGTGGTTGTGGATTCCATGTTTGGATAGAATGATGGACTGGTAGCTAAACATCTTGTTACGAGATGTTCATGCGATGTCGTTTGTTGATGAGCTCTTGGGTATCTTCGGCATGTTGGTTGAGAAGTTATAGTAACTCTTTTCAGATGAGCCTTCCATCATATGTATTTCTTTTGTTGGGTTTCTGCTGAGCATGTCTGCGAGTGTTCTTGGATCCCTTTAAATGACGGACTCGAAATCGTGCCGAAAACCACTCGCTCCATCTTAACAATTGCTGATGTGGGACCATCTTTTGCTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTCGATCGCGAAATTTATGTCCTATCGGATGGAACTCGAACTTCTCGATTGCTTTCTTTACCGCCAATATCTCTTTGAGCGTGGAGTGATAATGCATTTCGAATCTTTAAAGCGACCATACGTATCCGCAGATTTGACGTTTTCATTTATTTCTTCAAATAAAATAGCTCCCAATATTTGTCACTCGCGTGGGTTTAGGTATGTGCACGTGGAAGGAATCTTTAAAGGTGGTAGCTTCGAACCTCTAGTTTTAGGCTTTTGACCGCCTCGGTTTGTCGGTTTGCCCACTGTGGTGGATTCTTTGTCAGCATTTTACGTAGCGGTCTCGTCGGTAGCGAAAGGTCGCGGGATAAAGTCACTCACATAATTGATTACACCAAGGAATTGCTGAATTTGTCGCTTTGTGAGATTTTCGTCTGGGAAATCAAGGAGCGTCGTGGCAAGATGGGCCTGTGGTGAGAAGTTGCCTTCTTTAATTTGCATTCCAAGAAAATCGATGTTGGGCTGGGCTATGACCATCTTACGGGCCGAGAGCATAACTCCGAATTTCTTCACAATACTCTGGAATTGTTGAAGGAGTTGAACGTGATCCTTTTCATTTGACGAAAATAACAGGATATCGTCGATATATATCAAGGCTGTGTGAAGTAGAGGTTTGAATATACGAAGCATCGCTTGTTGAAACAGAGATGGTGCGGTTTTGAGACCGAACGGTAAGACATTCCACTGAAGGTGACGGTTTGGGAGACAGAAAGCAGTCTTGTACCTTTCGTCAGGGTGAACACCAAGTTGCCAAAATCCGGATTTAAGATCGAATTTTGAGAATATAGTTGCTCCTTGCAAATGTTGGAGGAGTGCTTTTTTATTCGGCAACGGGAACTTGATGTCTTGTAGGTATTGGTTGAGTGGCTTGTAGTCAATGACTAGCCTGAGTTTTCCTCTTGCTTGTTCTGCACGGTTGTTGACGTAGAATGCTTTGCACACCCATGGGGAATTTGTTGCTGAGACTATTCCTTGGGTTACCAACTGGTCGCATTCATCGTTTGCTTGCTCTAGTAGAGTTGGTGGCATTCCAGCATGACTTGCTTTAGTTGGTGTAGTGAGAACATTCTCCTTGAATGGCAATGAAACGAAGAATTCGGAATTTAGCCATAGGGGGTTGCTACATTTCTGGAGGAAATCTGTGTGTGATTCTGCACACGATGTTGTAGTCATCTCTTCTTTGATCTTCGCGAATTCTTGAGAAATCTTCTCTTCTACTGCGAAGAGACGTGGGATTGTTGTGTAAGCTTTGAAAGAGCCTTTCCATCTTAATCCTCGTAACTCAATTGAAATGTCATAAGCCCTTTTGAAGGCGTGATATGAATCCCATCCCAGAATTAAATCTTTTCCTGGTGCTGTAGAACCAAGTACTTGAGTAGTGATGCAACATCCTGGGAAAATCTCGATCGTTATCGGTTTAGACTTGAGCTTGATGGTTAAAGATCCAGAGTTTGCAACACGGAACTCCTGTTGATGAGGTAGCCACATAGACGGAGGTAAGATTTTTGGATTTAGTATAGTGGAATGAGCTCCTGTGTCTATGAATGCAATGACATGAACCGGATCTTCTTCACCAGATGGATCGAGGATGGTTACTGGCAGATGTGGGATCTGTATCTCGTCTTGTTTTGGCATTTTTGTAATTTTGAAGCAACAGTCTTCTTCTTCATCTTGAGATGACTCGGATGAATCGTTATAATCTGAGTAGCCACATATAGCGTCGTTGTCGCCGCTGTCATAGGATAAAACAGACTCTAAGTCATGGCCTTGAGATCTAAGTCGGTCGCGATCTCGAGATTGAATTGATCAGATATTGCTTCTTTTTGCGGACTTGTTTGGACAATTCTTAGCGTAATGCCCTTCTCTTCTGCATAGAAAGCATTTCGTTGACTTCTTGAAACTCCTTTTCTTAGGAAAAATCCTTTACGTCTGAATTTGGAGGAATGCTTAGAGAAACGCCTCTTGAATTTTAAATAAACTTCTCATGATTGTCGCAAGAACACGATTTCTTGGACTTTGAACACTTGATTGATAGATCTGGTCTTGCACATATCTTCGTTAATTGTTTCGATCTATCCATGAATTCCATCCAGAACTCCTTTTGTTTGCAGAGCTTATCGAGCGTTCTGAAAACGTACTGTTGGATCTGACCAATGGAAATTTCTTCAATGGTTTGACCTTGATCTCTGATGTACAGCTTAGTCTGCTGACTCAGATAGTCATCGATGGAAGAGAGATAGACGTGCTTGAGGCTTGCATTGTTGAGGCGTTGAGGCGTAATATCTTAGTGTCTGTCTTTCAAAATGTTTAGCGAGATCCTTCTTTTGTAGAGAACAACATTTTGCAGAGAAGAACTCTTCTTGTATCTGTTCTTTTTGGTGCGTGGGAGTACCGATAAATTCTCTGTGAATTTCTCCGAGAAGCAACGGTATTGTTGTTTGATAGACTTGATGTTGTCTATATTCTCCGAGTGAGTTCCACCATTCTTTGAGTGCACCAGATAGTCTTGCAGTGAATTGCTGAATTACCAAATGCAGTGGGGATGTGATGGCTTCAGAACTCATCCATGCATGGAATTCATCTAGACGATCATTCCATTTGTTGAAAGGAATGTCATCAAATGTGAAGACCATAACCTTCGAAGAAAAATGCCTATTGGGCATTTCTTGTTGAGCAGGCTCAAAATTCATTTCGTCACCGCTTGAGTTGATTTCATTGATGCTTGGTTCTTGTTTAGGAGCGCTGGAAGTTTCACCAATTGCAAATTGCTTTGGTAGTGATTCGTC
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1858Start:
6014180End:
6016037Strand:
->ChrB01_LTR-Caulimovirus_18
CAAGGGTGTTGAGGAGACTTGTCATCGAGAATTCGATAATTCCGATATCGTGTCCTTTCTTCTTTTCGTCGACTGATTCGTGACTAGAAGACGACGTGAGAGCTGGGGCTTGTTTCTTGAATGGGCTGTCTTGAAATTCCGAGTCTTTTTGACGTCGGGATTTTGATCGGACTTGTTTTGTCTTTGGATATGCAGCTGAAGTTGAGCCATAACGAGATGTAAAGATTTCATCAGAGGACAGAAAACCCGGTAGTGGAGTTCTTGATTTTGGGGTTTGATATCCTGATAGAAATCCAGGAGAGTAGGATCCTTGATACGTCGGTATTGAGGCACTTTCAAGAGGATTGAAATATGTATCTGATCGTCGCTGATTGCGAACCATGCTCTCGAGGCTACTTTGGAGATCTTTCAGCTGATTTTTTAGGCTGGCCGTCTCTGCTTCTTTGCTGCGGAATTGATTAGTATCTACCATCATGTGTTTCGCCATAGACATCATTTCTTGATGGAGATTGTTAAGCCGACCATGTATTTCTGTGATGGCTCCTTGGAGACTTTGGAACCTCTTATTATAGCTATTTGCTAGTTGATCAACCTTATTATTGATTGTTGATAATAGCCTATTTTGGGCGAGGGAGTTCTCGGTTTGCCAATTGAGTACTTTTTCTGCTTGACTCATCTCGTCAGGACCCGAAGGATTGATGGCTTGTGAGAGAATCTTTGGACAATGAGCGACGTTTTCCTTGACGAAGTCTTCTTGAGGAGGAAAGTCGTTGGGATTCATCATCATGATTTGTTGTTTAGTTTCTTCCTTTTGGCTAGAGTATTCGACTATGAAGTCGTACTTGCCATCCCCAAGTGGACCAACAGTAGGATCTCCTTCTAGGTACCTTTTGTAGAGAGGGTCCTTTTTCTTTTGTCTTCGCCTTCGTTTTTCATCATCAGATTCATCGTAAGCTTCTGAACAGGCGGTGCAGTTGCAGATGTCAAAGCGGCAATGTCCGTCTTCATCAATAAAAGGATAGATTATTCTCCCATCTTTGTCAAATTGAAAAGGTTTCGGGATGTCTTGTTTTTGTGCTGGGCCGTGGAAGTCTTCTTCATCGACTTGGATGGTGAATTGTGTGAACAATTGTTTTCTGAAAGAAGACGATCTTGGCTTTTCAAATTTGATCTCCGTCGTTCCATCCTTTCGAGAGTTAAAGCTGACTTCTGAGGATTGTATAGGAGATTGGGTAGCTTGATGAAGCTTCTCATAACTCGTCACCCATGATTCTGGCAATCGTATGAGTAGTTCTTCGCGAGAGATCTGCCGAGGGATTTGTATTGAGCTAGGCGCTTGAGATGCAGATGAGACTTCGAGGTATAGTGCTTCATCTGATGAGGGTAAAACAAGATCAAGAGCGTGATCTTGAATCCTGTAAACGATTTGGTGATGTAGCGTGGCTACTACACTCTTCTCTTGCATAGGTGCTCCGATTAGTTGAAGCTGAACCTTGAGCGTCTTCAACAGATTTGGATCTTGCAATGAGACATTAAAGTTTGGAAACAGTGTAACGAATACTGTTCCTGCATTTAATGTTGTCTGAACTGTTCCGATGCAAGCCTGCTGGTATGACTTTAATCGGGAGTCGATCAACGCAATTCGGGCTATGACAGGTAGACCTTTTCTAGCATGTAAGGTCAAGCCAATTCTTACTACACCAAAATGAAGGTGAGTATAGCCTTGCTGCTGCCACAATCTGGGTAAGTTCTCCGGGATGTTCAAAGAAATGAACTGCTCTTCTTCGGTGGCTGGAACTTGACAGGATGAGAATTTGCTGGATTGGACATATTCCATCACCTTTCGGCTGGAAGATGG
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
402Start:
6016042End:
6016443Strand:
->ChrB01_LTR-Caulimovirus_19
ATGAGCTCGCGAACTCCTTTGACGGAGAAGGCGCTGGGTTTTTTTGCGAAGTATTCATATGGGTTTAGTAGGGGAAGGGTAGTTTCGGGTAATTGGTCGCCCGGAACATATTCGATTTCATATAGGGAATTTATATTAGAGGATGATGAACGGCTTTTATTTTTGGGTAAAGTTGAAATAGCAAAAGGAGAATCAATTGAAGTAGGATTTGAGGTAGACATCATAAGGAAATTGTTTTCCAGATTTCTTAAATCAATCAGTGATAAACAATGATTCTATCAACCCTTTTCGCAAGACTATAGGCTCTGATACCATTATACTATGCACAGATACGGAGATGTCGATCGTGTTGATAGAGTCTTATTGACGATCGAAGGGTTCGGCGATTTTCCAGGTAAAGGG
Brassica carinata (v1.0)
ID:
ChrB01_LTR-Caulimovirus_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
433Start:
7457068End:
7457500Strand:
+>ChrB01_LTR-Caulimovirus_20
AATTATGTATAATAAGTGTGTTTAAAATAATGATGTAAACGCTGTAAATTTATGTAAGCATGATATAAGCGATGATGTAATCTCTGAAGTAAACATTTATGTCAGTGTACGTATCCTCACCTATAAATATGTGTGTATCCCCCTATTTGTGAAATAACATCTCATAATTTAATTATAAAAACTCTCTCTAAATTTCTTTCTCTAAAATGTTTTTCTAAGATCATTAGTTTTCAAGACCTTATGACATCTTTGTAAGTGTTGATTTATATCTTCCATTTGTAAGTCGCGATTTCTGCCTGTTGCTTAGATATATATATAAGCGGTTTTATCAACACGAATTTGTCCAAACGACTTTCGTGGGGTATATTTCCTAACAGTGGTTGAGCAAATCAACGGCTAGAGTAGTGCCTATATCGCTCCTTATATATGGAAT