ID Class Order Superfamily Length Start End Strand View
scaffold_3_rRNA_41 RetrotransposonsRet_otherrRNA15312442447424426004+
scaffold_3_rRNA_42 RetrotransposonsRet_otherrRNA33772442661224429988+
scaffold_3_rRNA_43 RetrotransposonsRet_otherrRNA19062443410124436006+
scaffold_3_rRNA_44 RetrotransposonsRet_otherrRNA27882443661524439402+
scaffold_4_rRNA_45 RetrotransposonsRet_otherrRNA15471281674+
scaffold_4_rRNA_46 RetrotransposonsRet_otherrRNA155145796129+
scaffold_5_rRNA_47 RetrotransposonsRet_otherrRNA831198957011989652+
scaffold_5_rRNA_48 RetrotransposonsRet_otherrRNA1371519176015191896-
scaffold_6_rRNA_49 RetrotransposonsRet_otherrRNA1472356986123570007-
scaffold_6_rRNA_50 RetrotransposonsRet_otherrRNA922471034124710432+
scaffold_7_rRNA_51 RetrotransposonsRet_otherrRNA4391530504815305486+
scaffold_7_rRNA_52 RetrotransposonsRet_otherrRNA1052033591620336020-
scaffold_7_rRNA_53 RetrotransposonsRet_otherrRNA3282422720824227535+
scaffold_8_rRNA_54 RetrotransposonsRet_otherrRNA18111191701119350+
scaffold_8_rRNA_55 RetrotransposonsRet_otherrRNA19724031032403299+
scaffold_8_rRNA_56 RetrotransposonsRet_otherrRNA13464768796477012-
scaffold_8_rRNA_57 RetrotransposonsRet_otherrRNA1371509441415094550+
scaffold_9_rRNA_58 RetrotransposonsRet_otherrRNA38816260231626410+
scaffold_9_rRNA_59 RetrotransposonsRet_otherrRNA16216265521626713+
scaffold_9_rRNA_60 RetrotransposonsRet_otherrRNA17216526361652807-

< 1 2 3 4 > Total 4


Arabidopsis lyrata (v2.1)

ID:

scaffold_3_rRNA_41

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1531

Start:

24424474  

End:

24426004

Strand:

+

>scaffold_3_rRNA_41

GGCCCTGTCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTATGAGTCTGGTAATTGGAATGAGTACAATCTAAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_rRNA_42

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

3377

Start:

24426612  

End:

24429988

Strand:

+

>scaffold_3_rRNA_42

GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCTAAGTTCCCTGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_rRNA_43

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1906

Start:

24434101  

End:

24436006

Strand:

+

>scaffold_3_rRNA_43

AAAAGATGACAGTCAAAACCTCGTCCTTTCTCTCTTTCCTTTGCGTTTGCGAGAATGTGGCGGGGAATTGCTGTGATCGATGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACGAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTAACTACTACTCGGATAACCGTAGTAATTCTAGAGCTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_rRNA_44

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

2788

Start:

24436615  

End:

24439402

Strand:

+

>scaffold_3_rRNA_44

GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCTAAGTTCCCTGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_rRNA_45

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1547

Start:

128  

End:

1674

Strand:

+

>scaffold_4_rRNA_45

GTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCTGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCTCGGGAGCTTTCCCCGGGCGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_rRNA_46

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1551

Start:

4579  

End:

6129

Strand:

+

>scaffold_4_rRNA_46

GTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTCGGCGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCTGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCTCGGGAGCTTTCCCCGGGCGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_rRNA_47

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

83

Start:

11989570  

End:

11989652

Strand:

+

>scaffold_5_rRNA_47

ATGACGGTCTTGACCTCGTCCAATTCTTTCTTTCCTTAGCGTTTGAGAGAATGTGGCGGGGAATAGCCGTGATCAATGAATGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_rRNA_48

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

137

Start:

15191760  

End:

15191896

Strand:

-

>scaffold_5_rRNA_48

GAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_6_rRNA_49

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

147

Start:

23569861  

End:

23570007

Strand:

-

>scaffold_6_rRNA_49

GAGACCGTTTATTAGTTCTCTTTCTTCTAAATGATAAGGTTCTGCATGCGACGAATCACCTATATCATATCGATCTAAATACTTTACCAAATGGTTTAGTTGCGGACGGTCGATATACAAATGACAGAGATGAATTAACGCAATTTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_6_rRNA_50

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

92

Start:

24710341  

End:

24710432

Strand:

+

>scaffold_6_rRNA_50

TTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_rRNA_51

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

439

Start:

15305048  

End:

15305486

Strand:

+

>scaffold_7_rRNA_51

AAAAGATGACAGTCAAAACCTCGTCCTTTCTCTCTTTCCTTTGCGTTTGCGAGAATGTGGCGGGGAATTGCTGTGATCGATGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACGAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTAACTACTACTCGGATAACCGTAGTAATTCTAGAGCTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_rRNA_52

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

105

Start:

20335916  

End:

20336020

Strand:

-

>scaffold_7_rRNA_52

TTAAGAAAGAGCTCTCAGTCTGCCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTGAAATTAAGCCGCATGCTCCAGTGGGGCCTTCCCTTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_7_rRNA_53

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

328

Start:

24227208  

End:

24227535

Strand:

+

>scaffold_7_rRNA_53

GGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCAAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_rRNA_54

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

181

Start:

1119170  

End:

1119350

Strand:

+

>scaffold_8_rRNA_54

CTCTGAAAATGGATGGTGCTGAAGCAAGCGACCTATACCTAGCCTTCGGAGCAAGAGCCAGGCCTATAATTGTAGGAGGGCGCGACGGTTGCCGCAAAACCTAAGGCACGAGCCCGGGTGGAGCGGCCGTCGGTGCATATCTTGGTAGTAGATAGTAGTAGCAAATATTAAAACTAGAGCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_rRNA_55

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

197

Start:

2403103  

End:

2403299

Strand:

+

>scaffold_8_rRNA_55

GTATCGTTGGCTAAGTCCTTTCCATGGTCGTGGTGTCGTGGAAATTGCCTTGAAATTATAGTTATCATGCAAGTAGTAGATAAACATTTTTAAGGCGACTTAAATATATATATGAAAGGAGGTGCAATATGTGGCAAAATGGCTTTGGGCCACAATTGAATCCATTGAGATTTAGTCTTGTTTTCGTTAAGACCCAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_rRNA_56

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

134

Start:

6476879  

End:

6477012

Strand:

-

>scaffold_8_rRNA_56

CCGGAGGTAGGGGGCCGCCGTAATCCGCGTCGGTCCACGCCCCAAATCGATTGGCGGACCGGATTGCTCCGTTCCGCATCCGACCGGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_8_rRNA_57

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

137

Start:

15094414  

End:

15094550

Strand:

+

>scaffold_8_rRNA_57

CTGATGATTCATGATAACTCGACGGATCGCATGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_rRNA_58

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

388

Start:

1626023  

End:

1626410

Strand:

+

>scaffold_9_rRNA_58

GAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATAAAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCCGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTATGCTCTGACCCGAGTAGCATGGGGCAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_rRNA_59

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

162

Start:

1626552  

End:

1626713

Strand:

+

>scaffold_9_rRNA_59

TGCTTATGGACCCGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_rRNA_60

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

172

Start:

1652636  

End:

1652807

Strand:

-

>scaffold_9_rRNA_60

CTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTT