ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Copia_21 RetrotransposonsLTRLTR-Copia11715678581567974+
scaffold_1_LTR-Copia_22 RetrotransposonsLTRLTR-Copia44115682761568716+
scaffold_1_LTR-Copia_23 RetrotransposonsLTRLTR-Copia31815688171569134+
scaffold_1_LTR-Copia_24 RetrotransposonsLTRLTR-Copia335915691161572474+
scaffold_1_LTR-Copia_25 RetrotransposonsLTRLTR-Copia41015727111573120+
scaffold_1_LTR-Copia_26 RetrotransposonsLTRLTR-Copia16315731801573342+
scaffold_1_LTR-Copia_27 RetrotransposonsLTRLTR-Copia27817233721723649+
scaffold_1_LTR-Copia_28 RetrotransposonsLTRLTR-Copia17119153931915563-
scaffold_1_LTR-Copia_29 RetrotransposonsLTRLTR-Copia467119155351920205-
scaffold_1_LTR-Copia_30 RetrotransposonsLTRLTR-Copia15919202061920364-
scaffold_1_LTR-Copia_31 RetrotransposonsLTRLTR-Copia24522505252250769-
scaffold_1_LTR-Copia_32 RetrotransposonsLTRLTR-Copia9023972902397379-
scaffold_1_LTR-Copia_33 RetrotransposonsLTRLTR-Copia59023996562400245-
scaffold_1_LTR-Copia_34 RetrotransposonsLTRLTR-Copia9224947452494836+
scaffold_1_LTR-Copia_35 RetrotransposonsLTRLTR-Copia30225268162527117+
scaffold_1_LTR-Copia_36 RetrotransposonsLTRLTR-Copia424725271282531374+
scaffold_1_LTR-Copia_37 RetrotransposonsLTRLTR-Copia30725313792531685+
scaffold_1_LTR-Copia_38 RetrotransposonsLTRLTR-Copia30825696172569924+
scaffold_1_LTR-Copia_39 RetrotransposonsLTRLTR-Copia78328001102800892-
scaffold_1_LTR-Copia_40 RetrotransposonsLTRLTR-Copia12528011932801317-

< 2 3 4 5 6 > Total 565


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

117

Start:

1567858  

End:

1567974

Strand:

+

>scaffold_1_LTR-Copia_21

TTGATAACCGAGGTCTTTAGCTCCCGGTTCTAATCCATACAACCCCAAAAGGTGAAAGGTAAAAACCAAAACCCTAAAAGCTAAAGAACCGATCATGAATTTGAACCTAACAAACGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

441

Start:

1568276  

End:

1568716

Strand:

+

>scaffold_1_LTR-Copia_22

CCTAATCCTAAAACCCTAAATAAAATAGGAAACCCTAGATAATAGGAAATCTTTAAAACCCTAAATCATAGGAATAATAAGAAACCCTAATCAAATTAGGAAATATTTAGAAATAGGAAAATTAATCCTAAAGTAAAGAGGAAAGTAAATCCTAAAAGGAAAAGGAAAAGTTAATCCTAATTAAAAGAGGAAATCTAATCCTAAGCAAAAGAGGAAAGTCAAATCCCTAAGTAAATCGATTCATGGTTCGGTCTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

318

Start:

1568817  

End:

1569134

Strand:

+

>scaffold_1_LTR-Copia_23

TGAGCAAAATAATGACTTACTGATAAAAAACAGTGAGTTACGACCTCATAGATTAACCCCATTACCTAATGCCAATAAGGCCGCAGAGGATAAGAAAGAATCCAAAGAATCTAACCACGTCTAAAGTGATAGACCACACGGCCGTGACCGTGGTGGATGGAAAGGACGTGGTTGTGGCCACTATAACTCATCCGGCCGTGGGAACCACTATAACCGTGGATGTAGACCCAATTCCGGCCGTGGTCGAGGGCGAGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

3359

Start:

1569116  

End:

1572474

Strand:

+

>scaffold_1_LTR-Copia_24

GCCATAGATGTGGTATTGAAAGGACGTGGTTGTGGCCACTATAACTCATCCGGCCGTGGGAACCACTTTAACCGTGGATGTAGACCCAATTCCGGCCGTGGTCGAGGGCGAGGACGATGTGGTATTCCCAAACCACAACACTCGACCAAATGAGTATGCCATAGATATGGAATGGGAAACCATTGGGCTAAGATATGTAGGATTTCCAAACATCGTTGTGACCTCTATCAAGAGAGTGTAAAAGGGAAGAATCCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

410

Start:

1572711  

End:

1573120

Strand:

+

>scaffold_1_LTR-Copia_25

GACCATCATATGAGGAGACAACACAGCCTGTATCGCTCAGCTCAAGGACGGCTACATCAAGGGAGATTGGACGAAGCACATTCTAACAAAGTTCTTCTTCATGCATGACTTGCAAAGGGATGGAGAAGTTCGAGTGGTACAAGTTCGGTCCAGCGACAACTCAGCCGATCTCTTTACCAAGGCATTACCAACATCGACATTGAGGAGGCTCACGCATCAAATTGGAATGTGGAGACTTAAGGACTTGCAGGGATG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

163

Start:

1573180  

End:

1573342

Strand:

+

>scaffold_1_LTR-Copia_26

GGCCCATGTCCATGTTCTTGAAGATTCTCCTTATGACGGCCTATATTGTACTTAGTGGGCTTTTGGGCTTTAGGGTTTACTAGCCCAATGGGGATTTGTCTCCCCTTGTCATGTATATATATGTATCGAAACCTCATTCATTAATCAATAGAACAACACAGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

278

Start:

1723372  

End:

1723649

Strand:

+

>scaffold_1_LTR-Copia_27

TGTGAGCAATAAACATGTAAAAGGCTCAACAACAGAAAGCCCATCACAGTGCAGTCAACAGATGAAGACAAAAGAGGATTCTTCTTCATCTGAGAAACAGAGCAACGAAGGTTCAAGGAAGGTGACTGCTGGTGACTCATCATAGCCAGCTGCATTAGCCGTTTAAGGATAAGATTAGCATCTAGATCCTTCTTCCTTCCTGTATATAACTCTAGTGTAAAACCCTAATATAGATTAGCGAGAATACAAACATTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

171

Start:

1915393  

End:

1915563

Strand:

-

>scaffold_1_LTR-Copia_28

TGCCAAAGGGATAAGAGAATAAAGAGAAAGTTGTTTCTATTGACATTAAGAAGAGAGTATATATACATCTTACACATGAAACCCTAAACATACTTAGGGAAATTAACATAATAGCCTAAGTATAATATATTTACATTATAGGTCCCTAATACTCCCCCTCAAGTTGGAGCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4671

Start:

1915535  

End:

1920205

Strand:

-

>scaffold_1_LTR-Copia_29

TCCCTAATACTCCCCCTCAAGTTGGAGCATGAAGATTATACATGCCCAACTTGCGCCGTAGATAAACAAATTGTTGAGAACCCAAAGCCTTAGTAAAGATATCCGCTGGTTGCTCTGTAGTGTTAAGATGTGCAGTAACCAGTGAGCCATTCTGAATTTCATCCCGAATGAAGTGACAATCCCTCTCAATATGCTTTGTCCGCTCATGAAAAACTGGATTAGCAGCAATATGTAAGGCTGCCTTATTGTCACAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

159

Start:

1920206  

End:

1920364

Strand:

-

>scaffold_1_LTR-Copia_30

TGCCAAAGGGATAAGAGAATAAAGAGAAAGTTGTTTCTATTGACATTAAGAAGAGAGTATATATACATCTTACACATGAAACCCTAAACATACTTAGGGAAATTAACATAATAGCCTAAGTATAATATATTTACATTATAGGTCCCTAATATCTTTCTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

245

Start:

2250525  

End:

2250769

Strand:

-

>scaffold_1_LTR-Copia_31

TGCTTCACAGTGATCTTTCAAAAGTTTACTCTTATCACCAACTAGGTAAGCCAAATAACTGAATAAGGTCTTGTACCAATTGTAGAGTATATGATACTTGCCTACACTCGGGTAAAGACTGTCTCATGTAATCATCTTGTTATGCTAGTTTCTTCTTTAATTGTAGCTTCTCCAATCTAAAATGAACTCCTAAGAGTGATAAGACTAATTTTGCTTCATCCATGATCTAATCCTAAACATCTTTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

2397290  

End:

2397379

Strand:

-

>scaffold_1_LTR-Copia_32

GATAAATAGTATCGGCAATCTCAGATGAATAGTGTCGTCAAACAGTTGATGAACAGTATCATGTGTACAGTACCCGGTAATGAACAGTGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

590

Start:

2399656  

End:

2400245

Strand:

-

>scaffold_1_LTR-Copia_33

TGTAAATGCAAGAGCTACTAAGTTTTGAATTAGTTCACGATGTAACTCTGAATTTCTCAAAAACTCTTTCGATTAATAGAAAATATGTTTACAAGGTTTCTCCTTTAACACTATTTTCTATTCTCACTAAGTCTTGTTCTTTAATCACAGACCGATTAAGAACAATAACTCTCCTTAAAACCCTTAGCTCTCTTTAAGCCTCTAGTTCTCTATTTCTCTCAAACTAAGACTTAATAGCTAGGAATTCTCTCTAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

92

Start:

2494745  

End:

2494836

Strand:

+

>scaffold_1_LTR-Copia_34

CATCATCTTCTTCATCATTATCTTCATCATCATCTTCGTCACTATCTTCTTCATCTTCTTCTCCGTCCTCGTCATCTTCATCGATTTGATCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

302

Start:

2526816  

End:

2527117

Strand:

+

>scaffold_1_LTR-Copia_35

CAAACTTGATAAACCTTAAGAAGACTTAAGGCCCAAGATTAAACTAAATAAGTCGGTTTAGTTAATAGATTTGGGATAAGATTTAGCTAGGTTAGGAGTTATCAAATCCTAGTGTGTTTAGGACTTTTGGTTTTGTATAAATAGAGGTACCTAGTTTGTGGTAACCCTATGAGTTGTTTTGAGATTAAGAGAGATTGTGTAAACCTTTGTTTTGAGTAAGTTTCAAAGGTAATAAGAAGAGTTGTTCTTATAAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4247

Start:

2527128  

End:

2531374

Strand:

+

>scaffold_1_LTR-Copia_36

GAGCCATACTCTTGGATTGAGTAACCTAGGATCTAAAAGAAAGCTTTACACGCTACGAACAGAGTTCGTTAAAGGTGAAGCATGGCTGATATAATCCCGGTTCCAGCTAGGAACAAGGAGACTAGTTCTTCTATACAGTGCCCGATGCTTAGCACATCAAACTACACTGCATGGAACATGCGAATGAGAGGAGTACTTAGGGTTCATAAAGTTTGGGATACAATAGAACCAGGAAACGACGATGTAGAAAAGAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

307

Start:

2531379  

End:

2531685

Strand:

+

>scaffold_1_LTR-Copia_37

CAAACTTGATAAACCTTAAGAAGACTTAAGGCCCAAGATTAAACTAAATAAGTCGGTTTAGTTAATAGATTTGGGATAAGATTTAGCTAGGTTAGGAGTTATCAAATCCTAGTGTGTTTAGGACTTTTGGTTTTGTATAAATAGAGGTACCTAGTTTGTGGTAACCCTATGAGTTGTTTTGAGATTAAGAGAGATTGTGTAAACCTTTGTTTTGAGTAAGTTTCAAAGGTAATAAGAAGAGTTATTCTTATAAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

308

Start:

2569617  

End:

2569924

Strand:

+

>scaffold_1_LTR-Copia_38

TGTTGGTTTAAGCTTGAAAGAGGCTTAAACCGGAGGTTACTTAAACTGCAAGATGTCGGTTTATTGAAGAGATAAAGACTAATTCTTTAGGAGTTATCTAGAGAATATTATGTAATCCTAATTGAGTTATGATTAGGTTTAGAGGTTGTGGCTATATAAGCATATATCGAGTTGTGATATAGCTTATGAGATTGAGATAGAGAGTTTTATGTGTTTAAGGTTTTTGAGAAAGAGAGTTTGTTTGAGAGTTTGAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

783

Start:

2800110  

End:

2800892

Strand:

-

>scaffold_1_LTR-Copia_39

TGTAAGTGCGGATGAGGTAAGATAAATTGTAGAAAGTAAACGAGACAAGAAATTTGTTAACGAGGTTCGGTTTTTCCTACTCCCCGGGACCAAGTCCAGATTTCGATTTCACTAAAACAAGAAAGCAAATTACAACCAATTCGCAAACGCGTAAAACAAGCCCAACCCTCTTGATTTACCGCTCCCTTCTATAACGTGAAACCTTAAGGATAATTTCTACCCTTAACTAAACTCCCCTTGAGTCTAGATTTAATC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Copia_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

125

Start:

2801193  

End:

2801317

Strand:

-

>scaffold_1_LTR-Copia_40

TTCTTACAATGTTTTTGAACTCAACAACTCTAACTCTAATTTGAACTCATATCAATACACCATCACCATTATTCTCCCATGTTTGAGTCAAAATACGGTTAAATACTAGTTTTAAGTTTTTCTCC