ID Class Order Superfamily Length Start End Strand View
scaffold_9_LTR-Cassandra_701 RetrotransposonsLTRLTR-Cassandra35910106921011050+
scaffold_9_LTR-Cassandra_702 RetrotransposonsLTRLTR-Cassandra35011958821196231-
scaffold_9_LTR-Cassandra_703 RetrotransposonsLTRLTR-Cassandra35713111611311517+
scaffold_9_LTR-Cassandra_704 RetrotransposonsLTRLTR-Cassandra11013115201311629+
scaffold_9_LTR-Cassandra_705 RetrotransposonsLTRLTR-Cassandra35613116301311985+
scaffold_97_LTR-Cassandra_706 RetrotransposonsLTRLTR-Cassandra8442654348+
scaffold_97_LTR-Cassandra_707 RetrotransposonsLTRLTR-Cassandra14749025048+

< 32 33 34 35 36 > Total 36


Arabidopsis lyrata (v2.1)

ID:

scaffold_9_LTR-Cassandra_701

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

1010692  

End:

1011050

Strand:

+

>scaffold_9_LTR-Cassandra_701

TGTAACACCTCGGTTTCAAAAATATGGTAGGGCATGCAAAAAGGTTTAAAAGGATTGATTTGGCCACCTATGTCACTAAAGTGCACTTATCTTTTCGGTCAACTATCCTGAGAGAATTTCACAGATAAGGGTGCTTGAGGTGGAGCAATTTCAGGATGAGTGACCTTCCGGCAAGTGATTGTTAGAACTGTGTGAGTGGGGACAAAACACAGGGAAAGATCATGTGGTAATTTGTATGGTCGGTAAACAAGTCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_LTR-Cassandra_702

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

1195882  

End:

1196231

Strand:

-

>scaffold_9_LTR-Cassandra_702

TATAACACCTCGACCGCCCCTACCAGTGAGCATCCACGTCCTTTATCGGGTCCGTGAGCCCCCGACAGTCGGTCCGCTACGTCCGAGAGGTTTTAAAGACTTGTTTACCGATCCTACAAATCACCACCTGATCTTTCCCTGTGTTTTGTCCTCACTGATACAGTTCCGATAATTATTTTCCGGAAGGTCACCCATCCTGAAACTTTTCTAGCTTAAGCACCCTTAACCCTGGAGCTCTCTCAGGACAGTTGATCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_LTR-Cassandra_703

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

1311161  

End:

1311517

Strand:

+

>scaffold_9_LTR-Cassandra_703

TGTAACACGCCGGTTTCAGAAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCATTTATCTGTTCGGTCAAACATCGTGAGAGAACTCCACAGTGAAGCGTGCCTGGGCTGGAGTAGTTTTAGGATGGGTGACCTTTCGGGAAGTGATTGTTGGAACTGTGTGAGTGAGAACAAAACACAAAAAAATATCATGTGGTGATTTGTAGGGTCAGTAAACAAGTCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_LTR-Cassandra_704

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

1311520  

End:

1311629

Strand:

+

>scaffold_9_LTR-Cassandra_704

TGGTATCAAAGATGAACCCAGACGAGTGTGGAGTCAAGATGGCTCACACCGTAGGGGGTGACGGTCTTGGTGCGCAACAAAGACGTTGTAATCTGTTAGTGGGGGTGAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_9_LTR-Cassandra_705

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

1311630  

End:

1311985

Strand:

+

>scaffold_9_LTR-Cassandra_705

TGTAACACCCCGGTTTGAGGAATATGGTTGTGCATGCGGAGATATTTAAAAGAATTGATTTGACCACCTATGTCACCAAAGTGCACTTATCTTTTTGGTCAAACATTTCGAGAGAACTCCACTGTTAAGCGTGCTTGGGCTGGAGTAATTTTAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAATGAAGACAAAATATAGGAAAAGATCATGTGGTGATTTGTAGGGTCAGTAAACAAGTCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_97_LTR-Cassandra_706

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

84

Start:

4265  

End:

4348

Strand:

+

>scaffold_97_LTR-Cassandra_706

TGTAACACCCCGGTTTCAGAAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTAGGTCACCTATGTCACCAAAGTGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_97_LTR-Cassandra_707

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

147

Start:

4902  

End:

5048

Strand:

+

>scaffold_97_LTR-Cassandra_707

CAATTATCTTTTCGGTCAAACGTCCTGAGAGAACTTCACAGTTAAGCGTGCTTGGGCTGGAGCAATTTCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTATGGCAAAACACAGGGAAAGATCATGTGGTGAT