TBGR-Browse-Aal-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr2_rRNA_21	Retrotransposons	Ret_other	rRNA	442	2353341	2353782	-
Aa.chr2_rRNA_22	Retrotransposons	Ret_other	rRNA	289	2353793	2354081	-
Aa.chr2_rRNA_23	Retrotransposons	Ret_other	rRNA	313	2354164	2354476	-
Aa.chr2_rRNA_24	Retrotransposons	Ret_other	rRNA	515	2354487	2355001	-
Aa.chr2_rRNA_25	Retrotransposons	Ret_other	rRNA	436	2421988	2422423	+
Aa.chr2_rRNA_26	Retrotransposons	Ret_other	rRNA	315	2688136	2688450	+
Aa.chr2_rRNA_27	Retrotransposons	Ret_other	rRNA	236	6350993	6351228	-
Aa.chr2_rRNA_28	Retrotransposons	Ret_other	rRNA	103	16718258	16718360	+
Aa.chr2_rRNA_29	Retrotransposons	Ret_other	rRNA	130	19746549	19746678	+
Aa.chr3_rRNA_30	Retrotransposons	Ret_other	rRNA	83	22703792	22703874	-
Aa.chr5_rRNA_31	Retrotransposons	Ret_other	rRNA	225	2785242	2785466	-
Aa.chr5_rRNA_32	Retrotransposons	Ret_other	rRNA	104	5726497	5726600	+
Aa.chr5_rRNA_33	Retrotransposons	Ret_other	rRNA	82	5728041	5728122	+
Aa.chr6_rRNA_34	Retrotransposons	Ret_other	rRNA	685	7654882	7655566	-
Aa.chr6_rRNA_35	Retrotransposons	Ret_other	rRNA	109	32294042	32294150	+
Aa.chr6_rRNA_36	Retrotransposons	Ret_other	rRNA	102	33050411	33050512	+
Aa.chr7_rRNA_37	Retrotransposons	Ret_other	rRNA	712	9371169	9371880	+
Aa.chr7_rRNA_38	Retrotransposons	Ret_other	rRNA	215	9525165	9525379	-
Aa.chr7_rRNA_39	Retrotransposons	Ret_other	rRNA	368	15887557	15887924	+
Aa.chr8_rRNA_40	Retrotransposons	Ret_other	rRNA	100	24517209	24517308	-

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_21

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

442

Start:

2353341

End:

2353782

Strand:

-

>Aa.chr2_rRNA_21

ATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTAT

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_22

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

289

Start:

2353793

End:

2354081

Strand:

-

>Aa.chr2_rRNA_22

TGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCTGAAGATCAAGGTCGGTCGGCGGTGCACCCGTGAGGGATCTCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGCTTCCGGTTCGTTTTTC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_23

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

313

Start:

2354164

End:

2354476

Strand:

-

>Aa.chr2_rRNA_23

TCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCTGAAGATCAAGGTCGGTCGGCGGTGCACCCGTGAGGGATCTCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAACCCACAGGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTGAAGGCGCGTGCTGCAGACCACGATTAAGGCAGCGACGTCTCCGCGACCTAACAAAAGACCGGGCTTTGGCCACCACCTTAATC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_24

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

515

Start:

2354487

End:

2355001

Strand:

-

>Aa.chr2_rRNA_24

TTCTCTGAAGATCAAGGTCGGTCGGCGGTGCACCCGTGAGGGATCTCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTCATCCGTGTTTCAAGACGGGTCGAATGGGGAACCCACAGGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTGAAGGCGCGTGCTGCAGACCACGATTAAGGCAGCGACGTCTCCGCGACCTAACAAAAGACCGGGCTTTGGCCACCACCTTAATCCGCGTCGGTCCACGTCCCGAATCGATCGGCGGACCGGATTGCTCCGTTCCGCATCCGACCGGAACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_25

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

436

Start:

2421988

End:

2422423

Strand:

+

>Aa.chr2_rRNA_25

GGGTTTAGACTGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGAAAGTAATTCAACCTAGTATGAGAGGAACTGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCAGTCAGAATCCGGGGTAGAAGCGACGCATGTGCCCGCCGCCCGATTGCCGACCCGCAGTAGGAGCTTTGGCTCCCAAAGGCACGTGTCGTAGGCTAAGTCCGTTCAGCGGAAGCGCCGTTCTTACTGCCTTGAATTATAATTACCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATATGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTATCG

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_26

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

315

Start:

2688136

End:

2688450

Strand:

+

>Aa.chr2_rRNA_26

GGCGCGAAGCTACCGTGCGCTGGATTATGATTGAACGCCTCTAAGTCAGAATCCATAATCCGGGCTAGAAGCGACGCATGTGCCTGCCGCCCGATTGCCGACCCGTAGTAGGAGCTTTGGCTCTCACAGGCATGTGTCGTAGGCTAAGCCCGTTCGGTGGAAGCGCCGTTCTGACGGCCTTGAATTATAATTACCACCGTGTGGCGGATAGAATCCTTTGCAGATGACTTAAATACGCAACAAGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCAACTGAAATTCAGCCCTTTGTCGCTAAGATTCGA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_27

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

236

Start:

6350993

End:

6351228

Strand:

-

>Aa.chr2_rRNA_27

TCGAATCTTAGCGACAAAGGGCTGAATCTCAGTTGATCGTGGCAGCAAGACCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGTCGGCTGCAAATGATTCTACCCGCCGCTCGGTGGTAATTATAATTCAAGGCAGTCAGAACGGCGCTTCCGCCGAACGGACTTAACCTACGACACGTGCCTTTGGGAGCCAAAGCTCCTACTGCAGGTCAGCAATCGGGCTGCGGGCAC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_28

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

103

Start:

16718258

End:

16718360

Strand:

+

>Aa.chr2_rRNA_28

TTATACCCAAGGAAAGCAGCAAATGCACAATTACCCAATTTTGACACAAGACATTAGTAATAATAAATAAATAAACTGGAATCTTCGAGTGTGGTAATTGAAA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_29

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

130

Start:

19746549

End:

19746678

Strand:

+

>Aa.chr2_rRNA_29

GTAATCTTTGAAATTTCATCGTGATGGGAATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCTTAATAAGCGCGAGCCATCAACTCGCGTTGACTACGTCTCTGTCCTTTGTACACACCGCCCGT

Arabis alpina (v4.0)

ID:

Aa.chr3_rRNA_30

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

83

Start:

22703792

End:

22703874

Strand:

-

>Aa.chr3_rRNA_30

CATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGG

Arabis alpina (v4.0)

ID:

Aa.chr5_rRNA_31

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

225

Start:

2785242

End:

2785466

Strand:

-

>Aa.chr5_rRNA_31

GGCATCGTAGACTTGTTATTGCATCAAAATTTATTGGTCTAAACGACCATTGTCCTTTCGAGAACCAACCGTGAAGGGATGTCTCCACATAGATAGTTAGCACTTAGCAAAGGTCTCTTTCATTAATAGAACCGTTAACGTTGAACCGACTAAAAACGACCATACACTATTATCCATTGAATTAAGAACAAACTTTCAGTCTGTCAATTCTTTCTAGTTTGTATC

Arabis alpina (v4.0)

ID:

Aa.chr5_rRNA_32

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

104

Start:

5726497

End:

5726600

Strand:

+

>Aa.chr5_rRNA_32

GCTAAGTTCTTTCAGCAGAAGCGCCGTTTTGACTGCTTTGAATTATAATTACCACCGAGCGGCGGGCATAATCTTTTGTAGATGACTTAAATATGTGTTGGGGT

Arabis alpina (v4.0)

ID:

Aa.chr5_rRNA_33

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

82

Start:

5728041

End:

5728122

Strand:

+

>Aa.chr5_rRNA_33

TATGCGATGAGGTATTGTAAGTGGAAGAGTGGCCTTACTGCCACGATCCACTGAGATTCAGCCCTTTATCGCTAAGATTCAA

Arabis alpina (v4.0)

ID:

Aa.chr6_rRNA_34

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

685

Start:

7654882

End:

7655566

Strand:

-

>Aa.chr6_rRNA_34

CACACATTTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCTAATGGGAAACCCACAAGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTGAAGGCGCGTGCTACAGACCATGATAAAGGCAGACGTCTCCGCGACCTAACAAAAGACCGGACTTTAGCCACAACCTTAATCCACGTCGGTCCACTTCTCGAATCGATCGGCGGACCGGATTGCTCGGTTCCGCATCTGACCGGGAACGCATCGCCGGCCCCCATCCGCATCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTGCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCATATTTAACCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGAAACTTGGGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCAAAGATGTCCGATATTCAAGTTGGGCTCTTCCCGGTTAGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTCTCCTCCGCTTATTGATATGTTGAAACTCAGCGGGTGATCCCGCCTGACCTGGGGTCAC

Arabis alpina (v4.0)

ID:

Aa.chr6_rRNA_35

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

109

Start:

32294042

End:

32294150

Strand:

+

>Aa.chr6_rRNA_35

TGAAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTAGATGGCAAGTCCGCGGTAATTCCAGCTCCAATAGTAAGTTGTTACAGTTAAAAAGCTCGTAGTTGAAC

Arabis alpina (v4.0)

ID:

Aa.chr6_rRNA_36

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

102

Start:

33050411

End:

33050512

Strand:

+

>Aa.chr6_rRNA_36

GAACAGCACTTGCACATGAGTTAAAGGATCTTAAGAGTCTGAAAAAATGTCTCTGATCGCTTATGCGCGAATTTCAGAAAAAAATTTAGTTAAAATTTTGGA

Arabis alpina (v4.0)

ID:

Aa.chr7_rRNA_37

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

712

Start:

9371169

End:

9371880

Strand:

+

>Aa.chr7_rRNA_37

GATTCCATGATAACTCGACGGATCGCATGGCCTTTGTACTGGTGACGCATCATTCAAATTTATGTCTTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAATGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAAGAGCGCAAATTACCCAATCTTGACACGGGGAGGTAGTGACAATAAATAACAATACTGGACTCTTTCGAGTCAGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTATGGTGCCAGCAGTCGCGGTAATTCCAACTCCAATAGCGTATATTTAAATTGTTGTAGTGAAAAAGCTCGTAGTTGAACCTTTGGATGGGTCGGCCGGTCTGCCTCGCGGTGTGAACCGGTCGGCTTGCCCCTTCGGTCTGCGATACGCTCCTGGCCTTAACTTGCCGGATCGTGCCTTTGGCGCTGTTACCATGAAGAAATTAAAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATCAGATTTCGATCCTATTGTGTTGGCCTTCGTGATCGGAGTAATGATTAACATGGATAGTCAGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGATTTATAAAAGACGAACAACTGCGAAAGCATTTCCCAAGG

Arabis alpina (v4.0)

ID:

Aa.chr7_rRNA_38

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

215

Start:

9525165

End:

9525379

Strand:

-

>Aa.chr7_rRNA_38

CTTTCACCCTCTTCGGCGCCCCTTTCTAGGGAACTTGGGCCCGGTCCGTCGCTCAGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACATCTGATTTTCAAGTTGGGCTCTTCCTAGTTCGCCGCTACTAACTGAATCCTTGTTAGTTTCTTCTCCTCCTCTTATTGATATGCTTAAACTCAGCGGGTGATTCCGCCTGACCTGGGGGCGC

Arabis alpina (v4.0)

ID:

Aa.chr7_rRNA_39

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

368

Start:

15887557

End:

15887924

Strand:

+

>Aa.chr7_rRNA_39

AAGGAAGGCAGAAATCTCGTGTGGAACAAAAGGATAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGTGTGGCCAATAAATCCTTTAGACCTTCGAATTTTGATGTTAGAGGTGTTAGAAAAGTTACCACAGGGATAACTGGCTTGTGGTAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGGTGGGTTTAGACTGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATCGCGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACC

Arabis alpina (v4.0)

ID:

Aa.chr8_rRNA_40

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

100

Start:

24517209

End:

24517308

Strand:

-

>Aa.chr8_rRNA_40

CCAGAGCACGCGTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTAGGGATTTGTTGCACGTATTAGCTATATAATTACTACGGTTATCCGAGTA