ID Class Order Superfamily Length Start End Strand View
Thla_scaffold10_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro153135174135326+
Thla_scaffold103_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro865763857723-
Thla_scaffold111_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro95796407796501-
Thla_scaffold13_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro14715741291574275-
Thla_scaffold14_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro27622828802283155-
Thla_scaffold14_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro10923974362397544+
Thla_scaffold15_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro228388082388309+
Thla_scaffold172_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro251190502190752+
Thla_scaffold28_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro82961007961088+
Thla_scaffold31_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro18627826392782824-
Thla_scaffold5_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro26730749623075228-
Thla_scaffold534_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro1095827758385-
Thla_scaffold57_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro95497410497504-
Thla_scaffold7_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro269709030709298+
Thla_scaffold7_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro14419446701944813+
Thla_scaffold82_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro147506105506251+
Thla_scaffold9_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro20634157733415978-
Thla_scaffold93_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro8819765981976685+

< 1 > Total 1


Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

153

Start:

135174  

End:

135326

Strand:

+

>Thla_scaffold10_LTR-Ngaro_1

CAACTCAATAATACACAGCAACAGAGCCAAGAACTGACAACTCAGCAGCAAATTCAGTTCCAGCAACAACAACAGGAATGGTTCCAACAGAAACAACAACAATGGCAACAGCAACAGCAACATTATCTTTACTATCTTCAGCAACAGCAGTTA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold103_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

86

Start:

57638  

End:

57723

Strand:

-

>Thla_scaffold103_LTR-Ngaro_2

GAGCGCACTGGCGTTTTTTCTTTTTTTTTTTCTTTTTTTTTTATGAGTGAATACACACGAACATGAATTAGTAAAAATAAAAAATT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold111_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

95

Start:

796407  

End:

796501

Strand:

-

>Thla_scaffold111_LTR-Ngaro_3

TGTTGTGGCTGCCAGTTGTTGTTAAAACGCTTGTAGTTGTTGTTGTTATTATGGTTGCGACTGTTGTTATAATTATTGTTGTGTTGACAATGTTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold13_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

147

Start:

1574129  

End:

1574275

Strand:

-

>Thla_scaffold13_LTR-Ngaro_4

CTGTTGTTGCTGTTGCTGCTGCTGTTGCTGTTGTTGTTGTTGGTGCTGCTGTTGCTGAAGTAACAATAGATTCTGTTTGTATTGTAGACTCAGGGCGTCTTCGTAACTAAGCGTTGCTCCAGCAGGAGCTGCCTGTTGTTGTTGTTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

276

Start:

2282880  

End:

2283155

Strand:

-

>Thla_scaffold14_LTR-Ngaro_5

TGTTGTTATCATTCCCATTGTTGTTGTCATTGTTATTCCCATTGTTGCTATTACCATTGTTGCCATTGTTGTTGTTATTCCCATTGTTTTTATTATCATTGCTTCCATTATTGTTGTTATTACCATTGCTTCCACCATTGTTGTTATTACCATTGCTTCCATCATTGTTGTTATCACCATTGTTGTTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTATTGTTTCCTTGTTGCGGCGATGGTGGAGATTGAGAGTCTGGAGAAGGCGGTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

2397436  

End:

2397544

Strand:

+

>Thla_scaffold14_LTR-Ngaro_6

AACAGATACAGCAACGTCAATTATTAATGCAACAGCAACACCAACGTCAAAAATTGCTACAGCAACAGCAACGTCAAATACTGCAAATGCAACAGCAACAACAGTAACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold15_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

228

Start:

388082  

End:

388309

Strand:

+

>Thla_scaffold15_LTR-Ngaro_7

CTTCGGTACACCGACGAATCAAGACCATCTATTCCTCCAGCAACAGCAACAGCAACAACAGCAGACACAGTTTCATCATCAACAACAGACGCAATTCCAGCCACAGCAGCAACAACAACAACAACAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGCAATTCATTCAGCAACAGCAGTTCCACCAACAGCAGCAACAGCGTCTGTTACATTCTCCTCC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold172_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

251

Start:

190502  

End:

190752

Strand:

+

>Thla_scaffold172_LTR-Ngaro_8

CAGCAACAGCAACAGCAACAACAGCTGCAACAACAGCACCAACAACAACAGCAGCAACATCAGCAGCAGCAACAACAACAGATCCAGCAGCAGCAACAGCAACATCACCACCAACAGCAACAGCTGCCACAACTCCAGCAACAGCAGCATCAAATGTCACAGCTCCAACATCAGCAGCAACAGCAGCAGCAACAAAAGCAGCATCAGTTGTCACAGCTTCAACACCATCATCAGCAGCAACAGCAGCAGCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold28_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

82

Start:

961007  

End:

961088

Strand:

+

>Thla_scaffold28_LTR-Ngaro_9

ATATATATACTAATATACATAAATACACACACACACATATATATATACTATATAATAGTGGTAGTAACATGTCCTTCTCCAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold31_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

186

Start:

2782639  

End:

2782824

Strand:

-

>Thla_scaffold31_LTR-Ngaro_10

TGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTGGTTGTTGAGGCAGCTCATGTTGCTGTAACTGCTGCTGCTGAGACTGAGCTAACTGTTGAGGTGGCTGAGACATAGGCTGCTGTAACTGTTGCTGATGGTGCAACTGTTGCTGCTGCTGATGCTGCAGCTGTTGTTGTTGAGGTTGTTGTTGT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold5_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

267

Start:

3074962  

End:

3075228

Strand:

-

>Thla_scaffold5_LTR-Ngaro_11

GCTGTGGTGTTGACTGCTGTTGGTGTTGAGGCGCTGGCTGCTGCTGTTGCTGTTGCTGTTGAGAAGGTGGCTGGTTTTGATGTTGCTGCTGCTGTTGTTGCTGCTGCTGCTGTTGTTGTTGTTGCTGATGATGATGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGTGCACGTTGCAACAAGAGTTGTTGCATTTGTATTTGCTGTTGTTGTTGTTGCTGCTGCTGCTGTGAAACCTGTGGGTGTTGAGATTGCTGCAATTGCTGTT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold534_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

58277  

End:

58385

Strand:

-

>Thla_scaffold534_LTR-Ngaro_12

GTGGATGCAGTGGTCTGACGTCTAGATGGTCCAGCAGCAGCAGCAGTAGAAGCGCCAGCAGTAGCAGCAGTAGAAGCGCCAGCAGTAGCAGCTCTAGCTGGATGCAGAG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold57_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

95

Start:

497410  

End:

497504

Strand:

-

>Thla_scaffold57_LTR-Ngaro_13

AGCAGTAGAAGTAGTAGTCTGGCGTCGAGATGGTCCAGCATCAGCAGCAGTAGCAGTAGAAGCAGAAATGCCAGCAGTAGCAGCTCTAGCAGGGC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold7_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

269

Start:

709030  

End:

709298

Strand:

+

>Thla_scaffold7_LTR-Ngaro_14

CAACAACAGCAGCTTCAGCAATTGTTGCACTCCTCTTTGAACCATCAGCATCAGCAATCGCAGTCTCATCAACAACAACAACAACAACAACAATCGCTGCAGCAACAACATCAACAACCGCTACAGCAACAGACTCAGCAGCTACAACAGCAGCAGCAGCAGCTAAGAACGCAGTCATTGCAATCTCATTCGCATCCACAGACACAGCCACAACCACAACAGTTACAACCGCATAAGTTGCAGCAATTTCAGCTTCCGCAGAACCAACT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold7_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

144

Start:

1944670  

End:

1944813

Strand:

+

>Thla_scaffold7_LTR-Ngaro_15

CAGCAGCAGCAACAACAACAACAACAACAACTCCTCTATCAACACCAATTACAACAGCAACAGCAACAGCGACAACAACAACAACAGATGCTTCTATTGCAGCAGCTACAGAAACAGCAGCACCAACAACAACAACAAGCTGCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold82_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

147

Start:

506105  

End:

506251

Strand:

+

>Thla_scaffold82_LTR-Ngaro_16

ACAACAGTTCCAGCAGCTTCAGATTCATTCACAGAAACAGCAGCAGCAGCAACAACAACAACAACAACAGCAGTTTCAGTTTCAACAACAACAACAGCAGCTGCAACAGCTTCTACAGCATCGCCTTCAACAGCAGGAACAACAAAA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold9_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

206

Start:

3415773  

End:

3415978

Strand:

-

>Thla_scaffold9_LTR-Ngaro_17

TAATATATATGTACACACACGCACGCGTACACACACACGCACGTACGCACGCACACACGCACACACGCACACATGCACACACACGCACGCATGCACGCACACACACGCACACACGCACACACGCACACACGCACACACGCACACACGCACATACGCACACACGCACACACGCACACACGCACACACGCGCGCACACACACACACAC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold93_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

88

Start:

1976598  

End:

1976685

Strand:

+

>Thla_scaffold93_LTR-Ngaro_18

AGCTGCTACTGCTGGCGTTTCTGCTCCTACTACTGCTACTGCTGCTGATGCTGGACCATCTCGACGCCAGACTACTACTTCCACTGCT