ID Class Order Superfamily Length Start End Strand View
Thla_scaffold105_LTR-Caulimovirus_1 RetrotransposonsLTRLTR-Caulimovirus611783363783973-
Thla_scaffold11_LTR-Caulimovirus_2 RetrotransposonsLTRLTR-Caulimovirus391733434863347402-
Thla_scaffold11_LTR-Caulimovirus_3 RetrotransposonsLTRLTR-Caulimovirus181233475063349317-
Thla_scaffold11_LTR-Caulimovirus_4 RetrotransposonsLTRLTR-Caulimovirus43633493203349755-
Thla_scaffold121_LTR-Caulimovirus_5 RetrotransposonsLTRLTR-Caulimovirus475606493606967+
Thla_scaffold121_LTR-Caulimovirus_6 RetrotransposonsLTRLTR-Caulimovirus995606978607972+
Thla_scaffold121_LTR-Caulimovirus_7 RetrotransposonsLTRLTR-Caulimovirus2460608569611028+
Thla_scaffold124_LTR-Caulimovirus_8 RetrotransposonsLTRLTR-Caulimovirus7151006810782-
Thla_scaffold132_LTR-Caulimovirus_9 RetrotransposonsLTRLTR-Caulimovirus2867709514712380-
Thla_scaffold132_LTR-Caulimovirus_10 RetrotransposonsLTRLTR-Caulimovirus1368718907720274-
Thla_scaffold133_LTR-Caulimovirus_11 RetrotransposonsLTRLTR-Caulimovirus690375257375946-
Thla_scaffold133_LTR-Caulimovirus_12 RetrotransposonsLTRLTR-Caulimovirus782376026376807-
Thla_scaffold133_LTR-Caulimovirus_13 RetrotransposonsLTRLTR-Caulimovirus490377546378035-
Thla_scaffold133_LTR-Caulimovirus_14 RetrotransposonsLTRLTR-Caulimovirus570378102378671-
Thla_scaffold137_LTR-Caulimovirus_15 RetrotransposonsLTRLTR-Caulimovirus381221218221598-
Thla_scaffold137_LTR-Caulimovirus_16 RetrotransposonsLTRLTR-Caulimovirus356227547227902-
Thla_scaffold14_LTR-Caulimovirus_17 RetrotransposonsLTRLTR-Caulimovirus97211315551132526+
Thla_scaffold14_LTR-Caulimovirus_18 RetrotransposonsLTRLTR-Caulimovirus139511326011133995+
Thla_scaffold14_LTR-Caulimovirus_19 RetrotransposonsLTRLTR-Caulimovirus80311340621134864+
Thla_scaffold14_LTR-Caulimovirus_20 RetrotransposonsLTRLTR-Caulimovirus23511349691135203+

< 1 2 3 4 5 > Total 12


Thlaspi arvense (v1.1)

ID:

Thla_scaffold105_LTR-Caulimovirus_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

611

Start:

783363  

End:

783973

Strand:

-

>Thla_scaffold105_LTR-Caulimovirus_1

TTTTTCTTTATCGGATGATGATTCGGATGAAACTTCAGAATCTGAGTATCCGCATATAGCATCATTGTCGTCACTATCGTATGATAGAACGGATTCGAGGTTATGATTGTCGAGATCGATATCAGGGGCAATACTGGATATAGAGTTAATAAGATACTCCTTCTTCTTCTTTGACTTATTTGGACAATTTTTTGTGAAATATCCTTCCTTACGGCATAGAAAGCATCTCGTCGTCTTTTCGAAGCTTCGTTTCTTTCTGAAGAAACACTTACGTCTGAACTTGTTAAAGCGTCCTCGGAATGGCTTTCTAAATTTTCAAGATTTACCTCGAGTGTCGCATGAACAAGTCTTCTTGGATTTGGAACACTTGATTGAGAGGTCTGGCCTCGCACATATCTTAGACAGTTGCTTTGATTTGTCCATGAATTCCATCCAGAATTCCTTCTGCTTGCAGAGCTTATCGAGTGTCCGGAAGACATATTGTTGGATTTGACCAATAGATATTTCTTCGATTGTCTGTCTTTGGTCCCTGATGTACAACATGGTTTGTTGACTCAGGTAGTCGTCGATGGAGGAAAGGTAGACTTGCTTCAATCTTGGGTTATTGAGAC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Caulimovirus_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3917

Start:

3343486  

End:

3347402

Strand:

-

>Thla_scaffold11_LTR-Caulimovirus_2

GGAGTTGTGCATCTTGGAAATATTCCGGCGGGTATTGTTGAGACACTTGTTGAGACATTTCTTCTTGTTTTACCATCTCCGAGCTGATCTGTCTTTTGACCTTTCGTAGCATCTGTCATGTTTTCGTGTTTCAATATGAAATATTGTAAATCTTTGTCGAGGCTCATCTGGTAGTCAGCAGAGTAGTAGATCCAGCTTGGGATGAATGTAATGGGGAAAGTCTGTCTGGCATTGTTGAGGCGAAATGCGTGCGTTTGAAAGTCTTCATACGGTTTGTCGTCATGTATATTGAAGTCTGGGCGGATAGCTCTTTTGTAGTCATTGTGGTGGATGAGTGTGGGTAGAGCATGAAGTTTGCCGGATTTGATGTTGATTTGAACAGGTCGGTGGAAGAAGTATATAGAGTGAGGGTTGAAGAACAGATTGAGGCTTCTTTGACCTCGTAATTTCTTGAATGGTAAGCTTGTTGCTTTTGCTGATCTTCTTAGTTTTCCGTTCCAGATGTTGAAAGATGCAAACCATGTTAGGAAAGTTGAGAAACATTCCTTCTGACCTTGATGGGCATTGATGTACTGATATAACCACTCGATGTCGAACGTGATGCCTATGGTGTAGACCGAGCATAGATACCATAGGAAGCATAGAACTTCTTCAGGCATATTTGAATTTTCGATCCAGTAGAGGTGAGCGAACGGATAGTCTGGGTGAATTCTCATTGGTGCGATGTAGTGACAGTTGATACCGTATTTTGAGAGGATGATCGACTGGTAGTGGAAGATTTTATGCTGAAGATGTTTGTGCAGAGAGTTTCTTTGGATTAGCTGATGGGCGTCTTCGGGCATGTTGGCTTCAAAGTCAAGTAACGCTTTGTCGAAGTGGATGAGCTTGCCATGAGGTGAATTTCTTTTGGTGGGTTTCGGCTGAGCATGTCTGCAAGAGTATTTTTCTTGCCCTTTAAATAAAAGGATTTGAAGTCGTACTTTGAAAACCATTCGCTCTATCGTAATAGCTGCTGGTGTGGGCCTATTTTTTGCTTGAATTGTAGCATCTTTGGGAAAGAGGACATATCCATTTCGATGCAAAATTTATGTCCAATCAGATGGAACTCGAACTTCTCGATAGCTTTTTTTGACCGCTAAGATTTCTTTGAATGTGGAGTGATAATGCAGCTCTGCGTCTTTAAAGCGTCCGCTTTTATATCTGCAGATTTGACGTTTCCCATTTGTCTCTTCGAACAATATGGCTCCCTAATATTTGTCACTCGCATCAGTCTGTAGAATGCGTTTCCCCGAGGAGGGAATCTTCAGATGTGGTAGCTTCTGTATCTCTAACTTTAGCCTTTTGACTGCTTCTGTTTGTCATTTTGCCCATTGAGGTGGATTCTTAGTCAGCATTTTTTGGAGTGTTCTTGTCAACTGCGAAAGTTACGGGATAAAATCACTTACATAATTGATTATCCCAAGGAATTGCTGAACTTGTCGCCTTGTAAGATTTTCGTGTGGAAAATCAAGAAACGCTGTAGCTTGATGGGACTGAGGCGTTATCTGTCTGTTGTTAATCTTAATTCCAAGAAAGTCGATGTTGGGCTGGGCTATAATCATCTTTCGGGCCAAGAGCATAATTCCGAATTCCTTGACAATGCTTTGAAACTTCCTGAGAGTCTGAATGTGCTATGTTGTACTTGACGAAAATAAGAGAATGTCGTCGATGTAAATTAGCGCTGTGTCGATTAGTGGCTTGAATATCCTTAGCATCGCCTGCTGGAATAGTGAGGGTGCTGTCTTTAATCCAAAAGGCAAAACACGCCACTGAAGATGGCGATTTGGAAGACAAAATGCTGTCTTGTACCTTTCTTCTGGGTGAACTCCAAGTTGCCAGAACCCTGATTTGAGGTCGAACTTTGAAAATACTGTTGCTCCTTGTAGATGCTGCAGAAGGGCCCTTTTGTTTGGCAGAGGGAACTTGATATCTTGAAGATATTGGATCAAGGGCTTGTAATCGATAACTAACCTGAGCTTTCCTCTTGCTTGTTCTGCTCTGTTATTAACATAAAATGCTTTGCATGCCCATAGTGAATTTGTTTCTGAGACGATTCCTTGATTGACCAGTTGGTTACATTCTTTGTTCGCCTGTTGCAATAAGGTAGGTGGCATTCCTGCATGACTTGCTTTTGTCGGAGTGGTGTGAACATCTTCCTTGAAAGGTAGTGACACAAAGAACTCTGAATTTAGCCATAGTGGATTGTTACACTTCTGAAGGAAATCCGTATGGGAATCTGAACAGCAGATTATCGTGATTTCTTCTTTGATCTTGTTGAACTCAGGAGGCGCTCCTTCTTCAAGTGAAAATATGCGAGGTATTTTTGTGAAGGCTTTGTAGAAAGACTTCCATTTCATTCCTCAGTTCGAGTGAGATATCAAACTTCTTCTTTAACGCATAGTATGTATCCCATCCCATGATTAAATCTTTTCCTGGCGCAGAAGACCCTAAAACTTCTGTTGTAACTTGACATCCTGGGAAGATTTCTATGGTTATTGCTTTGGATTTGAGCTTGACGGATAGCGAGCCAGCGTTTGCGACCTGGAACTCTTGTTGGTGTGGCAGCCACATTGAAGACAGAAGAACTTTGAGATTCATTATAGATGAATGAGTGCCCGTATCTATGAATGCGATAGCATGAACTGGTTCTTTTTTTCTTCGTGGATCAAAGATCGTGACCGGCAAGTATGGCGGTTGAACTTCATCCTAACGTGGAATTTCAGTGATTTTAAAGCAACAATCTTCCTTTTCTTCATCGGATGATGATTCGGATGAAACCTCAGAATCTGAGTATCCGCAGATAGCATCATTGTCGTCATTATCGTATGATAGAACGGATTCGAGGTCATGATTATCGAGGTCGATATCTGGGGTTAATAAGATACTGCTTCTTCTTCTTTGACTTATTTGGACAATTTTTTGCGAAATGTCCTTCTTTACGGCATAAAAAGCATCTCGTCATCTTTTCGAAGCTTCGTTTCTTTCTGAAGAAATGCTTACGCCTGAACTTGTTAAAGCGTCCTCGGAATAGCTTTCTAAATTTCCGAGATTTGCCTCGAGTGTCGCATGAATAAGTCTTCTTGGATTTGGAACACTTGATTGAGAGGTCTGGCCTGGCACATATCTTGGACAGTTGCTTTGATTTGTCCATGAATTCCATCCAGAATTCCTTCTGCTTGCAAAGCTTATCGAGTGTCCGGAAGACATATTGTTGGATTTGACCAATAAATATTTCTTTGATTGTCTGTCTTTGGTCCCTGATGTACAACATGGTTTGTTGACTCAGGTAGTCATCAATGGAGGAAAGATAGACTTGCTTCAAGCTTGGGTTATTAAGACCATTAAGCGCATAATACCTCCGTGTTTGACGTTCAAAATGTTTAGCCAAATCCTTCTTCTTGAGCGAGCAGCACTTTGCTGAAAAGAATTCTTCTTGTAGTTGCTCCTTTAGGTGAGTAGGTGTACCGATGAATTCTCTGTGAATCTCTCCGAGGAGCAAAGGGATAGTCGTTTGATAGACTTGCTGCTGTCGGTACTCACCGAGCGAGTTCCACCATTCTTTGAGGGCTCCTGATAGTCGTGTCATGAATAGCTGAATGACTAGCTCCAGGGGTGATGTAATGGCTTCCGAAGTCATCCATGCATGAAATTCGTCGAGTCGGTCATTCCATTTTTCAAAAGGAATGTCATTGAACGTGAAGATCATGACTTTAGAAGTGAACTGCTTAGGTGGAGGTTCTTGATTTTGGGGGCGTGTGTAACTCATTTCTTCATCGCTTAAAAACACCTCATTTATGTTTGGTTTTCTTTTGGGGGCAGTTGATCCTTCTCCGATGGCAAATTGCTTCGGGAGAGATTCTTTGTCTGAATTATCGTCG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Caulimovirus_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1812

Start:

3347506  

End:

3349317

Strand:

-

>Thla_scaffold11_LTR-Caulimovirus_3

TATCAAGCAGATTGGACATCGAGAATTCGATTATCCCAATATCTTTTTCTTTCTGCTTCGAATCTTCAATGGATTCATGGCTTGAAGAAGAGGTTAGAGTCGATTTCTTACTTGGATTGACTAGGAATTCTGATTCCTTTTGTCTTCTTGGTTTCGCCCGATTGTCTTTGTTTTGAAATTGCTAGCCGATGGCGTGCCATATCGAGATGTGAAAGCCTCGTCTGATGAAAGGAAACCTGGAAGAGATGTCTTCATCTTAGGTTCTTGATAACCCAAAAGAAATCCTGGAGAGTCTGATCCCTGATATGTAGGAAATCATGATGGCATACTTCCGAGAGGATTAAAGTATGCGTCAGATTGATTATGGTTGTGAATCATGCTTTTTAGGCTGGCTGTCTCAGCTTCTCTGCTTCTGAAGTGAGATGTATTGAACATCATGTGTTATGCCATAGTTTTCATCTCTTGATGAAGATTGTTGAGTCGGCCGTGGATCTCCATTATTGAGTTTTGTAGGCTACTCAATCTTTTGTTGTAGCCATCAGTGAGTTGATCAACCTTGTGATTTATTGTTATCAGAAGTTGATTTTGGGCGAGGGCATTTTCTGTTTGCCAATTAAGGACCTTCTCTCCTTGGCTCAACTGGTCAGGTCCGGTGGAGTTGACGGCTCTTGTAAGGATCTTCGGACTATGAGTGATACCGTCATTGGTGAAATCTTCAGGTGGAGGGAAAATGTTTGCTTGCATCATTAAGATTTGGGGTTCTTCCCTTTTCTCCGAGTATTGGACAATGAAATCGTACTTATCGTCGCCTAGTGGTCCGACAGTGGGATCACCCTCAAGATACCTCTTGTAAAGAGGATCTTTCTTTTTCCTTTGTCTTTGGCGGATTTCCTCATCGGATTCGTAAAAATCTTATGTGCAAGCTGTGCAGGAACATACATCAAAGTATTGATGTCCGTTCTCATCCTTGAAGGGGTAGACTACCGATCCGTCTTGACCGAAAGAAAGAGGTTGTAGAGCTCCAGCTTTGAATGGTTCATGGAATTCATGTTCATCAATTTGTATGGCAAATTAAGTGAATAGTTATTTCCGAAACGATGAAGATCTTGGTTTTTCGAACTTTATTTCTCTTGTCTCGTCGTTTCGTGAGTGGAAACTGACTTCTGATGTTTGAACCGGAGTCTGGGATGCTTTATGGAGCTTCTCATAACTCGTGACCCATGATTCTGGTAGTCAACGAAGTAATTCGTCAAGGGAGATCTGCCGAGGGATCTGAATTGAGTTTGGTGCATGTGATGCCGAGGTGACTTCGAGATACAAGGCTGCATCAGAGGATGGTAGTGCAAGATCAAGCGCATGATCTTGAATTCGGTAGACGATCTGATGGTGTAGGGTTGCTATGACGCTCTTTTCTTGCATTGGTGCTCCCACCAATTGCAACTGGACCTTCAGTGTTTGTAGCAGATTTGGATCTTTCAGTGAAACGTTAAAGTTTGGGAATAGTGTGACAAACACTGTTCCTGCGTTTAACGTTGTCTGAACCGTTCTGATGCAGGCTTGTTGATAGGACTTTAGTCTCGAGTCGACTAAAGCTATGCGAGCGACTACTGGTAGACCTTTTCGAGCATGAAGGGTCAGACCGATTCGTACTACTCCAAAGTGAAGATGAGTATATCCATGTTGTTGCCATAGCCTTGGTAGATTTTCGGGGATGTTGAGTGAAATGAATTGCTCTTCTTCAGTGGCTGGGACTTGGCAAGATGAGAATTTGCTTGACTGGACGTACTCCATTACTCTTCTATTTGAAGATGG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Caulimovirus_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

436

Start:

3349320  

End:

3349755

Strand:

-

>Thla_scaffold11_LTR-Caulimovirus_4

TAATAAGCTCGCAGACACCTTTGACCGAAAAAGCGCTAGGTTTTTTAGCAATGTATTCATATGGGTTTACAAGTGGAAGAGTAGTTTCGAGTAGTTGATCACCCGAAACATATTCGATTTCTTAGAGGGAATTTATATTGGAAGAAGATGAACGGCTTCTGTTTTTAGGTAGAGTAGAAATTGAGAATGGATTGACAAAGGATTTGATGTGGACATTGTGAGAGGGTGTTTTCCAGAACATTCAAAACAAACAATCATAAACGATGATTCTTTCTATCAATTCGAAAACACTTAGGCTCTGATACCATTTCTAGCATGAACCTTTGGCATCGTATTGACTACAGTCATGTTGACAAACAGGGGCGATATTTTCCAGATAAAGAGAGTTCTACTGGACACTTCTAACCTCTTACTTGCTCAACCACTGTTAGGAATT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold121_LTR-Caulimovirus_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

475

Start:

606493  

End:

606967

Strand:

+

>Thla_scaffold121_LTR-Caulimovirus_5

GTGGTTTATCAATACGAATCTTGTCAACACGACATTCATAGGGAGATAAACAGTAGTTGAGCAATCAGAGGCCAGTAGTTGCCCAATACATCTCCCTTACTTGGAAATTATCGCCTTCGTCTATCAACACGACTCTAGTCAACAAGATATCTCATAGGTTCATAATGGATCTGGTATCAGAGCCCGGTTCTTTCGAAATGATCGAAAGAATCATTGTTTATGATTGATATTTTTGAATGTTCTGGAAACACTTTCTCACCATGTCTACTTCAAATCCTTTATCCATTGATTCTCCATTTTTAATTTCTACTTTACCAAAAAACAAAAGTCGTTTGTCTTCATCCAGCATAAATTCCCTATATGAAATCAAGTATGTTTCAAGAGGTCAATTGCCTGAAACTACTCTTCCACTGGTGAATCCATACGAATACTTTGCTAAAAAGCCTAACGCCTTTTCAGTCAGAGGTGTTCGTGA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold121_LTR-Caulimovirus_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

995

Start:

606978  

End:

607972

Strand:

+

>Thla_scaffold121_LTR-Caulimovirus_6

CCACCTTAAAACAGAAGAGTCATGGAGCATGTCCAATCCAGTAAATTTTCATCATGTCAAGTTCCAGCCACTGAAGAGGAACAATTTATTTCGCTCAACATTCCAGAAAACCTACCAAGGTTGTGGCAGCAGCAAGGATACACTCATCTGCATTTTGGGATGGTACAAATTGGTCTGACCTTCCAAGCTCGAAAAGGTGTACCAGTGGTAGCTCGCATAGCTTTAGTCGACTCAAGACTAAAGGTATACCAAAAAGATTGCATTGGGACTGTTCAACAACATTAAACGCAGGAACAATATTTATAACACTGTTTCCAAACTTTAATGTTTCTCTAAAGGATCACAATCTATTACAAACACTCAAGGTCCAATTGCAACTAGTCGGAGCACCTATGCAAGAAAAAGCATAGTAGCTACCATACACCATCAGATCGTCTATCGAATCCAAAATCATGCTCTTGATCTTGTACTACCATCATCTAATGAAGCATTATATCTCGAAGTCACATCAGCATCGCAAGCACCCAACTCTATTCAAATTCCTCGAAAAATCTCTTACGAAGAATTACTGCATCGACTACCAGAATCATGGGTCACGAGCTATGAAAAGCTACATCAAGCAAACCAGACGCCGGTCCAGACATCTGAAGTCAGCTTCCATTCTAGAAATAATAGAACAACCATCAAGTTCAAAAAACAAAGAACATCATTGTTTCGGAAGCAACCGTTCACTCAATTTCCTATATAAGTTGATGAACACGATTTCCATGGTCCATTAAAGGAACAAGTTCCAAAACCAATATATTTTTGTTAGGATGGAACAGCCGTATACCCTTTCATGGATGAGAATGGACATCAATACTTTGATGTATGTTCTTGCATTGCTTGAACAGAAGAAGTCTACGAATCTGACGAAGAAATCCACCAAAGACGAAGAAAAAAGGAAAGATCCTCTTTACACGAAATATCTCGAAGGTGATCCCACTGTTGGACCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold121_LTR-Caulimovirus_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2460

Start:

608569  

End:

611028

Strand:

+

>Thla_scaffold121_LTR-Caulimovirus_7

GATATTGCATCAGGCCATTACGTGATGGTAGATACAATTTTATAGTCCAATACTCGGAAAAAGGTAGAACCTAAAATCATGATGATGCAAACAAAAGATTTCCTTCCAACTGAAGATTTCACCAAAGACGATATCGCTCATAGTCCAAAGATCCTCAAAAGAGCCATCAACTCTTTCCGACCTGACCAGCTAAGCCAAGGATAAAGGATCCTCAGTTGGCAAACAGAAAAATGCCCTAGTCTAAAATTAACTTTTAACAACAATAAACCACAAAGTTGATCAGCTTGTTTATTTCTATAACAAAAGATTGAGCAGCCTACAAAGCTCAATAATGGAGATCCATGGCCGACTTAGTAATCTTCATCAAGAAATGACAGCTATGGCACAACACATGATGGTTAATATGTCCAATTTCCGAAACAAAGAAGCTGAGACAGCTAGCCTCAAAAATCAGCTAAAAGATCTCCAGATAAGCTTAGAAAGCATGATTCATAATCAGAATCAAGCAGATACATACTTTAATCTTCTTGGAAGTATGCTATCAGAAAGACCTATGTATCAAGGGTCCTAATTCCCAGGATTTCTCTCTGGTTATCAAGAGCATTAACGAATCCCTCTCTCCCAGGATTCTTATCATCCGACGAAGCTTTCACATCTCGTTATGGCACAAGTTCAGTTAGTAATTTTAAAACGAAGACAACTCGGGCAAAACCAAGAAGACAGAAGGACTCAGAATACCTGGTCAATCCAACCAAAAGACCAACTCTTACCTCCTCCTCAAGCCATGAATCTATTGAAGATACAAAGAAAAAAGAAAGAGATATCGGGATAATTGAATTTTTGGTGTCCAGTCTGCTCGATACTCTCAGCAAAACTTCTAGTGGAATGGCAACTAAAGAACAGGCCCAAGCACCTCAAGTTAGTTCGTCACAGCCAATCGCGATGATCAATCATTTCTCTGATACAAGCTGCAATAGCTACAATGATAATGATGATAGTTCAGACGAGGAGTCTCTCCCAACGCAATTTGTTAGATGAGAAGGATCAGTTACTCCAAAAAGAGAACCAAATATAGATGAGATCTATTCAAGTGGTTAGGAGATGGATTACACACGCCCCATATATCAAGAAATGTCATCAAAGCAGTTTGCTTCAAAAGTCATGATATTCGCATTCTATGACATTTCCTTTGAAAAATGGAATGAATGACTTGGCGAAATTCACGAATGGATAAATTCAGAAGCCACAACATCACCATTAGAGCTTGTTATTCAGCTATTTACGGCATGACTATCTGGAGCACTTAATGAATGGTGGAATTCACTTGGTGAATATCGACAAAAACAAGTCTATCAAACAACAATTCTGTTGCTTCTAGGAGAAATTCACAGAGAATTCATCGCTACACCTACTCATCTAAAAGAACAACTGCAAGAAGAATTCTGCACAGCAAAATGTTGTTCGTTAAAGAAAAAGAATTGGGCAAAACACTTTAAACGACAAACGCGAAGATATTATGCACTCAACGGCCTCAATGACCCAAGCTTGAAGAAAGTTTAACTTTCCTCCATAGATGACTATCTGAGTCAATAAACTAAGCTGTATATCAGAGACCAAGGAAAGCAATTGAAGATATCTCTATTGGCCAAATTAAACATTACATCTTCAGAACACTTGACAAGCTTTGCAAGCAAAAGGAGTTTTGGATGGAATTCATGGACAAATCAAAGCATATCCAAGATATGTGCTAGACCAGATCAATCAATCAAGTGTTCAAAATCTAAGACGGCTTCTTCATGTGATCCTCGAATCAAACCTCAAGGTTTAGAAGATCATTTCAAAGGTGCTTCAACAAAATCAGATGCAAACGATTCTTCAGAAGAAAACAGAGCTTTGAGAAAACAACAAGAAGTTTTCTATGCCATAAGGAAGAACATTTCGCATAAAATTATCCAAACATATTGAAGTAAAGGAAGCAATATCTCATAAACTCGATATCAGTATAGCACCAGATATCGATCTCGACAACCATGATCTTGAGACCGTTCTATCGTATGATACTGACGACAAGGATGCTATCTGCGGCTACTCAAATTCTGATAATTCATCTGAATCATCATATAGAGAAGATGAAGAAGAATGTTGCTTCCAAATCACTCAAATGCCACGACAGGATAAGATACAAACACCACACTTGCAGTCACAATCTTTGACCCAACACGAAGAGAAAACCCAGTTCATGCCATTGCGTTTATAGACACGGGTGCTCATTCATCGATAATGAATCCCAAAGTTCTTCTGTCATCTATGTGGCTGCCACAACCAACAAGAGTTTCGAGTCGCAAACACCGGCTCACTATCAGTTAAGCTTAGGTCAAAACCGATAACTATAGAACTCTTTCCAGGATGTCAAATTAAAACTGAAGTTCTTGGTTCATTTGCACATGGAAAATATTTAAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold124_LTR-Caulimovirus_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

715

Start:

10068  

End:

10782

Strand:

-

>Thla_scaffold124_LTR-Caulimovirus_8

ATATGCATGCCAAGGAAGTCAATTTCTGTTTCTCCAACGACCATCATCTTTTCAGAGGGCATGATGCCATACTGCTGCACAATACCGTGAAACGTTGCTAATAGCTGGGTGTGAGAGTCTATGTCTGGAGAGAATAGTAGAATATCATCTAATGTACACCAGCATATTAGAGAGGATTGGCTCAAATATCTTGATCATGGCTTTTTGAAATAAGGAGGGGGCTATCTTCAAGCCGAAAGGCATAACCTTCCATTGATAATGACGATCTGGTATGCAGAAACCTATCTTAGGTCTGTCTTCTTCTAGTTTGATCCCCAATTGCAAGAATCCCGCCTTTAAGTCATACTTCGAGAAGGCTTTTTCTTGTGGAAGTGTTTGGTAGAGGGAACTTGTCATCAGCAAGAAACTGATTGTGTGGCTGGTAATTGATGACTAATCTTAATTTTCCTCGAACTTGCTTTGCCCGTTTATTGACATAAAATGCTTTACATACCCATGATGATATGGTTTTCTTAATGAGATCTTCCTTTTAGAGTTGATTTATTTCTTCAAGAGCAATGTTGTAGTGGTCTGCATTCATTCCTAGATGGCTCGCTTTGGTTGGATTGATATTTTCATTTTTCTTGAAGGGTAATGATATGAAGAAATCTGGATTTTTCCATAATGGTGAAGAGCATTTTGTGAAGAATTCTGAGTGAAAGGTGGCACAAGATGC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold132_LTR-Caulimovirus_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2867

Start:

709514  

End:

712380

Strand:

-

>Thla_scaffold132_LTR-Caulimovirus_9

GAGTCGTGTTGACAAATGAGGGCAGTAGTTTCCAAGTAAAAGGAGTTCTACTGGGCACTTCAGCCTCTTACTTGCTCAGCCACTGTTAGGAATTTACCCTTCTCTGAAAGTCGTGTTGACTAAAATGGTATTGATTAACCAGAAAGCTCAAGCATCTTTCTGGAGCAGACCGGCATCTTTCTGATGATAGAATGTAACCAAGGCTTATGAAGATGTTAGGAAGTCTGGAAAACTTAAAGATTTTAGGACTCATTAAGAGAGAGAAACTAGAGAGATGTTTTTATTAAAGTTCTGAGATGATTTGTTTCAAGGGGGTACACACATATTTATAGCGAGGAAGAGTGCACGCTGACATAAGCGCTTACCTCATCCTACATTATTGATGTGCTGACATAAGCGCTTACATCACTACTTATTTATTTTAAACACACTTATAATCCTACATAATTATACATAATAAAGTATATAGAGATACTTCTTTTAGTGATCCATCTCGAACTTGATGATATGTTTGTCGCAACAACTGTAGTGATCTCCTGGACATTCATATTCTTCTTCTTGTTCTTCAAAGTTTTCTTCGGGCTCCATGTTAAAGTCGATATTGAACATTTTTCTGATTTTGTTAATATTCATGGAATCGTCAGGGAGTTGTGCATCTTGGAAATATTCTGGCGTGCACTGTTGAGACATCTCTTCTTGTTTTACTATCTCTGGAGAGATCTGCTTTGTGATCTTCTTATTATCCGTCATGCTTTCGTGTTTCATCATGAAGTATTGTAAATCTTCATCGAGGCTCATCTGGTAGTCAGCAGAATATCAGATCCAGCTTTGGTTAAACGGAATAGGGAATGTCTGCTTGGCATTGTTGAGGCGAACTGCATACGTTTGAAAGTCTTCATAAGGCTTGTTGTCATGGATATTGAAGTCTGGGCGGATTGCTCTTCGGTAGTCGTTGTGGTGAATGAGTTTGGGTAGTGCATGAAGTTTGTTGGACTTGATGTTGATTTGAACAGGTCGGTGGAAGAAGTATATAGTGTGAGGATTAAAGAACATATTAAGGCTTCTTTGACCTCTTAATTACTCGAATGGTAAGCTTGTTGAAGGATGCAAACTATGTTAGAAAAGTCAAGAGAAAATCCTTCTGATCTTGCAGGGCATTGATGTATTGATATAGCCATCCTATGTCGAATGTGATCCCAATGGTGTAGACCGAGCATAGATATAGGAAGCACATAACTTCTTCAGGCAAGTTCTAATTTTTGATCTGGTAGAGGTGAGCGAACGCATAGTCCGGGTGAATCCCCATTGGTGGGATGTAGTGACAATTGATACTGTGCTTTGAGAGGATGATTGACTGATTGTGGAAGATCTTATGCTGAAGATGTTCGTGTAGAGAGTTTCTTTTGATTAACTGATGGGCGTCTTCGGGCATGTTGGCTTCGAAGTCATAATAACGCTTTGTCGAAGTAGATGAGCTCGCCATTAGATGAATCTCCTTTGGTGGGTTTCGGCTTAGCATGTCTGCAAGAGTATTTTTCTTGCCCTTTAAATAGAAGGATTCGAAGTCGTATTTTGAAAACCATTCACTCCATCGTAATAGATGCTGGTGTGGGACCATTTTTTGCTTGAATTGTAACATATTCGGGAAAAAAAGACATATCCATTTCGATGCAAAATTTATGTCCAATCAGATGGAACTCGAACTTCTCGATAGCCTTCTTGACCGCTAAGATCTCTTTGAATGTGGAGTGATAATGCATCTCTGCATCTTTGAAGCGTCCGTTTTTATATCCACAGATTTGACGTTTCCCAAATGTTTCTTCGAACAGTATAGCTCCCCAATATTTATCACTCGCATCAGACTGCAGAATGCGTGTTCCCGAAGAGAGAATCTTTAGAGGTGGTAGCTTATGTATCTTTACTTTTAGCCTTTTGACTGCTTCTGTTTGTCGTTTTGCCCATTGAGGTGGATTCTTTGTCAGCATCTTTTGAAGTGGTCGTGTCAACTGTGAAAGTTGTGGGATAAAGTCGCTCACATAATTGATTACCCTAGGGAATTGTTGGACTTGTCGCTTTGTGAGATTTTCGTCTGGAAAATCAAGAAGAGCTGTAGCTAGATGAGACTGAGGCGTGATCTGTCCATTGTTAATCTTCAATCCAACATCTAGCTACAGCTCTTCGTCTAGAAAATCAAGAAGTGCTGTAGCTAGATGTTGGACTGGGCTATAATCATCTTTTGGGCCGAGAGCATAATTCCGAATTTCTTGACAATGCTTTGAATCTGAGAGTCTGAATATGCTCTGTTGTGCTTGACGAAAATAAGAGAATGTCGATGTAAATTATAGCTGTGTCGATTAGTGGCTTGAATATTTTTAACATCGCCTGCTGGAATAATGAGGGTGCTGTCTTTAATCCATAAGGCAGAACACTCCACTGAAGATGGCGATTTGGCAGACATAATGCTGTCTTGTACCTTTCTTCTGGATGAACTCCAAGTTGCTAAAACCCTGATTTGAGGTCGAACTTTGAAAATATTGTTGCTCCTTGTAGATGCTGTAGAAGTGCCTTCTTGTTCGGCAGAGGGAACTTGATATCTTGAAGATACTGGTTCAAGGGCTTGTAATCGATAACTAGCCTGAGCTTTCCTCTTGCTTGTTATGCTCTGTTGTTAACATAAAATGCTTTGCACGCCCACAGTGAATTTGTTGCTGAGACGGTTCCTTGGTTGACCTGTTGGTCAGATTTTTCGTTCGCCTGTTGCAAAAAGGTAGGTTGCATTCCTGCATGACTCGCCTTTGTCAGAGTGTTGTGAGCATCTTCTTTGAAAGGTAATGACACAAAGAACTCTGAGCTTAGCCACAGTGGAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold132_LTR-Caulimovirus_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1368

Start:

718907  

End:

720274

Strand:

-

>Thla_scaffold132_LTR-Caulimovirus_10

ACTTGCCCTTTTTAGCTTGACATCCTGGGAAGATTTCTATGGTTTTTGGTTTGGACTTGAGCCTAATTGATAGCGAGCCAGCGTTTGCGACTCAGAACTCTTGTTGGTGAGGCAGCCACATAGAAGACAGAAGAACTTTGAGATTCATTATAGATGAATGAGCGTCCGTGTCTATAAATGTGATAGCAAGAACTGGTTCTTCTTTTCTTTGTGGGTCAAAGATCATGACAGACAAGTGCGGCAGTTAAACTTCATCCTATTGTTGCATTTCAGTGATTTTAAAGCAACAATCTTCTTTATCTTCTTCGGATGATGATTCAGATGAAACCTCGCAATCTGAATATCCGCAGATAGCATCATTGTCGTCACTATCGTATGATAGAACAGACTCTAGGTCATGATTGTTGAGGTTGATATCTGGTGCTACACTGAATATCGAAGTAATGAGATACTGCTTCTTCTTCTTTGACTTGTTTGGACAGTTTTTTTGCGAAATGTCCTTCTTTACGGCATAGATAGCATCTCGTTGTCTTCTTGAAGCTTTGTTTCTTTCAAAAGAACGCTTACGCCAGAACTTGTTAAAGCGTCCTTGGAACGGTTTTCTAAATCTTCGAGAGTTGCCTCGAGGTTTGCATGAACAAGACTTCTTGGATTTAGAACACTTGATTGAGAGGTCTGGTCTGGCACATATTTTGGACAGTTGCTTCGATTTTTCCATGAATTCCATCCAGAATTCCTTTTGCTTGCAAAGCTTGTCGAGTGTTCGGAAGACGTATTGCTGAATTTGACCAATAGATATTTCTTCGATTGTCTGTCTTTGGTCTCTAATATACAGCTTGGTTTGTTGACTCTGGAGGATAAGTAGTCTTGCTTCAAGCTTGGGTTACTGAGACCATTGAGTGCTTAATATCTTCGTGTTTGGCGTTCAAAGTGTTTAGCCAAATCCATCTTCCTGAGCAAACAACACTTTGCTGAATAAAACTTTTCTTGTAGTTGTTCCTTTAGATGAATAGGTGTACCAATGAATTCTCTGTGAATTTCTCCCAAAAGTAAGGGAATGGTCATTTGATAGACTTGCTCCTGTCGGTATTCACCGAGTGAATTCCACCATGCTTTGAGAGCTCCGGATAGTCGTGCCGTAAACAGCTGAATGACAAGCTCTAGTGGTGATGTAATGGTTTCAAAAGTCATCCAAGCATGAAATTCGTCGAGTCGATCATTCCATTTTTCAAAGGGAATGTCATCGAATGTGAATATCATGACTTTTTTAGTGAACTGTTTTGGTGGTAGTTCTTGATTTCTGGGGCGCGTGTAACTCATCTCCTCATCACTCGAAAAGACTTCATTTATATTTGGTTCTCTTTTTGG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold133_LTR-Caulimovirus_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

690

Start:

375257  

End:

375946

Strand:

-

>Thla_scaffold133_LTR-Caulimovirus_11

TGGCTGATTCTTGACATAGTTTGCTGCGGACATTGGCCTTTTTTGGTTCACTCATTTTGGAAATCTTGAAATTTTTCCTGTAATGTTAGAAAATCGGGTAAACAATTATTTTTACCTTTTATATATTATATATCAAAATCAAAGACAGATAAAATAGTTTGCCATCTTGCAAAAATTTGTTTAGAAACTAGATTTTTAATATTTTTTTGTAAAATCTCATTTGCAGATTTGCAATCAACACGTAATAAAAAAATTTTTCTTTATTAAATCATCTTGAAATTTAGAAATACAGTTTACGATAGATAAAACTTCTTTTTTAACTATAGAATAATTCCTTTGGGGCCCAAGCCAAACTCCAGGATGAAAACGAACTATTGACTCATGGGTTGACTCTGGCATTTTTTTGTTTAAGGATTCCCCTGCATCAGTTTCCACTATAATAAATGCACTTGGATGTGAAATGACTAAGCATGGTAAGGTTGTGACTTTCTTCTTAATATCTTGGACTATACTAGTATGCAAACTAGACCATAGGACTGAATTCCTCTGCAATATCTGAAACAATGGTTGAATGAGTTTTCATATATTGGGTAAAAAATCTGATATATAGTTTAAACATGCTAGAAATCATTGTAGTTGAGTTTTTTATTTTATTTCATCAGGGAATTTATTTGTAAATTTTATAGACCT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold133_LTR-Caulimovirus_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

782

Start:

376026  

End:

376807

Strand:

-

>Thla_scaffold133_LTR-Caulimovirus_12

AATATTATTGTTTCACCTTTAATATCTTGCAGTAAACATATCGGATTAAATTCAGATGTAGATTGCTTGAAATAAATTCGGTATATCAATAAATAGCTATGTCTCTCTTGTTGAAATTTAATTTATGGTAAATGTACATTTAATACTAATGTATTAAATATAGTAGGATCATATAAACTTACTTGGAAGTTGGGAGCACAAATAAAATGTACAGCTTTGTTGCATAAATTTGATTGTATAGCCCCTAATAAGGAGTCTTCAAATTTTAATAGAGTTTTATCTCTTAATAACATAAGTATAGGAGAATCAATCCCAGTTCTAGATAGTGGTTTTATTGCTATTTGTATTAATCCAAAATGAATATAATTAAATTCTGTTTACCTATAGCTTTCTAAGGCCATAGAAGAAAGCAATTTAATATCTTCAAATTCATTTTGTAATGATATAGTCTGTTCATGTTTTTTAATTGAATATGCTGTTTTAAAATCAAAAGTTCATATTTGATAAATATTTTCTGGTTTAATATGAGGTAATTCATCATGAGATCTTTCTTTATTAAAAGTGATAATTTTTGACATTATCTCTCTTTAATTAATTGTTTTTTGAGATGCAGAAGAAGATGAATGTATAGACTTAAGCAACTTTCTAACAGAAGATGTCATGCTTTAAACTTTATATAGACTCGAGACAACATACAAACTACCCCGGACTTATCAAAGACGGACGTTTATGTGGCTTGCCAACGGTCTCACAGCCACTAGGACTTACTGCCTGGAACACCT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold133_LTR-Caulimovirus_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

490

Start:

377546  

End:

378035

Strand:

-

>Thla_scaffold133_LTR-Caulimovirus_13

GAAGAGCGGTCTAAATTGTATTTTTCCCACCATTTGAATCAGTATTCCTGGACCAAAGAGTATGGCATGTCAGGTAGAAAAGGTATGAGGTTAAAGTGCCATGATAGGATCCAAGGTACCCCATGTCAATGTGGAAGGAGATTTTTTGTAAAGGGCCTATGAGTTCATGTTTTTCGTGTTTAGTATAGTAGGGTATGGATACTTTGAGTATTTGTGGAGGGTAAATTTGCTCACATGGTCCAAACCAGTGCCACCATTCATAGAACCATCCGAGTATTGATTTAGGACAGTGAAAGTCAAAAGAGATAAACCAAGAATAGTCATAGGTAAGTAGGTAAAGGGTATGAAGGAAGGTTTTTTGGTAATCTACGTAAGTAAACCCTGAAATATGGTACCCAAGAATAGAAAAGTATTTTCTGGTATGGAAGTTAAAGAGTCCAAGGTCTTGAGAATTACATATCCTGAGGATTTTACATGTGGAATAGGATAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold133_LTR-Caulimovirus_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

570

Start:

378102  

End:

378671

Strand:

-

>Thla_scaffold133_LTR-Caulimovirus_14

TTTTCCCTGTAAATACTCTCTTGTTAGAAAGTCGGGTAAACAATTATTTTTACCTTATATATATATATATTGTATATCAAAATCAAAGACAGATAAAATAGCTTGCCATCTTGCAAAAATTTGTTTAGAAACTAGATTTTTTACATCTTTTTGTAAAATCTCTTTTGGAGATTTGCAATCAACACGTAATAAAAACTTTTTGTTTATTAAATCATCTTGAAATTTAGAAATACAGTTTACGATAGATAAAACTTCTTTTTTAAATGTAGAATAATTCTTTTGGGGCCCAAGCCAAACTCTAGAATGAAAACGAGCTATTGACTCATGGGTTGACTCTGGCATTTTTTGTTTAAGGATTCCCCTGTAACCTATTTCGGATGCATCAATTTCTACTATTATAAATGCACTTGGATGTGGAATGACTAAGCATGGTAAGGTTATGACTTTCTTCTTAATATCTTGGATTATACTAGTATGCAAACTAGACCATGGGACTGGATTCTTCTGCAATCTCTGAAACAATGGTTGAATGAGCTTTCATATATTGGGTAAAAAATCTGAGATATAGTT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold137_LTR-Caulimovirus_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

381

Start:

221218  

End:

221598

Strand:

-

>Thla_scaffold137_LTR-Caulimovirus_15

TTTTAAAATTTTATTATACCTTGTGATATGTACTGATTTAGAAATTGGATTTTAGTTCGGAATAAAGATATGTTTGTTTTCGACATAATAAACTTACTTTTTTTTGTAATATAATAAAATATTTTAAGATGTTTAAAATATTCGTCTAAAGAATTTTAAAATATTAATATATTATAAATATAGACGATACAAAATTTTGAATATTTAGAAAAATACCATTAATGATTTTCTATAATTGACTAGGTGCATTTTTTAATCCAAAAACTATTACATTCGGTTACTATTGATCAAAAGGGACTGTAAATGCTGTTTTGTATTAATCATTTTTTGAAATTTGAATTTGCCAAAATCCTGATTTTATGTCAAACTTTTAAAAATACT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold137_LTR-Caulimovirus_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

356

Start:

227547  

End:

227902

Strand:

-

>Thla_scaffold137_LTR-Caulimovirus_16

TGTATTATGCCATCAACTTTTATATATTATAGATGATGTTTGCCGAATAAGTTTTTGGAAATAAATTCTGTTTATTGGGTATTGAATATCTAATCCATTTTAAGGTAACACTTAGAGATTTGTAAATAATTACTAATCATGTACTGCGTATTTTAATTTCAATTTTTTATTAACGTAAAAAGTGGTGCAAATTCGAGATAATCTTGATTTGAAATTAAACATTTGACTAGAAAATCTGAAATCTATTTTCTACAATAGATTTTTAATTCAAAATTTATTTGTATTGAACGTTCCTTGTAAACATTTATTTTTCATTGAAAATTTTCTTTCATATGGCAAATCAACAATATGCTGTT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Caulimovirus_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

972

Start:

1131555  

End:

1132526

Strand:

+

>Thla_scaffold14_LTR-Caulimovirus_17

AGGTGTTCCAGGCAGTAAGTCCTAGTGGCAGTGAGACCGTTGGCAAGCCACATAAACGTCCGTCCTTGATAAGTCCGGGTTAGTTTGCATGTTGTCTCGAGTCTAAGTAAATTTTAAAGCATGGCATCTTCTGTGAGAAAGTGGCTTAAGTCTAAACATGCATCTTCTTCTGCATCTCAAAAAACAATTAATTCAAGAGAAATAATATCAAAAATTACCTCTTTTAATAAAGAAATATCTCATGATCAATTACCTCATGTTAATCCAGAAAATATATATCAAATAGGAGCTTTTGATTTTAAAACAGCATATTCAATTAAAGAACATGAACAAACTATATCATTACAAAATGAATTTGAAGAGATTAAATTACTTTCTTCTATGGCCTTAGAAAGTTATAGGCAAAAGAAATTTAATTATATTCATTTTGGATTAATACAAATAGCAATAAAACCACTATCTAGAACTGGGATTGATTCTCCTATACTTATGCTATTATGAGATAAAACTCTATTAAAATTTGAAGACTCCTTATTAGGAGCTGTACAATCAAATTTATGTAATAGAGCTGTATATTTTAATTGTGCTCCAAACTTTCAAGTAAGTTTATATAATCCTACTATATTTAATACATTAGTATTAAATGTACACTTACCAGAAATTAAATTTCAACAAGAGAGACATGGCTATTTATTACTATACCGAATTTATTTCAAGCAATCTACATCTGAATTTAATCCAAGATGTTTATTACAAGATAATAAAGGTGAAACAACAATATTAGCAGTACATAGTAAAGATACTCCAACATCTACTTATACTCCTAAGCAACTAAAATGGACAGAAATAACAATTCCTGTCCCATGGAAGATTGATATTACTCAACCACCAAGAAACTTTGAACAAAAAATTATTACTAGTATAACTGAACAAACTGATGGAAAAATACTATTAAAATTTAGATCTTTTAGA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Caulimovirus_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1395

Start:

1132601  

End:

1133995

Strand:

+

>Thla_scaffold14_LTR-Caulimovirus_18

AAATCAAAAAAAAGACCTATTAATTTTCAAGCACCTATTGCAGAACCAATTCAGGGTTCTGAAATAGGATCTAGTTTTCCTACTTCTCCAACACCCTCTGATTTCAAATCTATAAATGTTATCTCAAATAAATTTGAAATAAATAAACAATACCTTAGAGAAGAATTTTTATCTAATCAGAATACAAATAAAAGACAATGGTATTTTAAAACATTTACCAAAGAAACAACTATTGAGTATCAGGAAATATGGTATGATCATATGAAATTTATGGAAACTAATATTTCATTTTTCACATGGTTTGAAACATATTCTTTAGAAAATGAAATTTACTACCCTTATAAAAGTGAATCAATTAACACTAGCTCAACTTTGTATAATACTTGGGAAATGACTAATGGGGAAAAACTTAAATCAGTTCATCCACCTTTAAAGGATTTAAATCTTCATACACCCCAAAGACAAGTAGTAGCTACACCATTTAGAACTGGAGCAAATAGAGATGATAGAGACACAATAAGTATGGCCGATATTAAAATAGTTTATGAATAAAATAATTACCATAGTCAAATACTTCACACCATTTCAAGACAAATAGACCATATAGATAACAAATTAGAAAATGATGAAAATAAATTAATCATGGGTTACCAACCATTTTTATATCCATTTAACTCTATATCACCACCTCTATTCAAACCTTTAACAAAACCAGTGCAACTTCCAAAAAATGAAATTTTAAAATCTATTTCAAGTAGACTAGATCGACTAGATAAAAATAAAGGAATTAATAACATTGATGAAAATAGTCAAACTGATACTGAAGAAGAAGTAGAAATTAATCGTATAAGAAGAAAATTTCAACCATCCACAAAACCATATTACCCTAGACATTCTCCACCTGACCTTTTATTTGAAGAACATCATAAATTCCCTACTGCAAATTTTTATACTGGAGAAGGTATATATGAATGAAATATAGACGGTAGATCAGAATATGAAATGATGAATTTATTTCAAGAAATGGGAATTGCTGGTTTGGCATATAAAGCTAAAGGATTATCAGACAAACAAGCATGTGTCCTTTTAGTTTCGGGATTTAATGGAGCATTAAAATATTGGTGGGATAATTCTTTAGATACTATAGCTCAAGATAATATAATAAATCATACTGAAACTAGAAGAGTAGAAGGTGACGATGGATTATATGAAGAAGAACAAATTCAAAATGCTATTGAAGTACTACTACATACTATGACTATGCACTTTGTAGGAAATCCCTCAGAAGAATTAACTAGTAAAAAACTTGTCCTAACCAACCTTAGATGTCCAACTTTAGGAGACTTTAAGTGGTATAAAAATATTTTTATAACTAATATATTTCAAAGAAATGAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Caulimovirus_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

803

Start:

1134062  

End:

1134864

Strand:

+

>Thla_scaffold14_LTR-Caulimovirus_19

GAAGAAGAACAAATTCAAAATGCTATTGAAGTACTACTACATACTATGACTATGCACTTTGTAGGAAATCCCTCAGAAGAATTAACTAGTAAAAAACTTGTCCTAACCAACCTTAGATGTCCAACTTTAGGAGACTTTAAGTGGTATAAAAATATTTTTATAACTAATATATTTCAAAGAAATGATTGTAATCAACCTTTCTGAAAAGAAAGGTTTATAGCAGGATTACCTTTTTTCTTTACAGAAAGATTAATAAGTAAATTAAAAGATTTTTCAGGAGGACAACCAATACCATGGGATTCAATAACCTATGGTCAATTGTTTGCATTCGTTAAAAAAGAAAGATTACAAATTTGTCAAGAACATAAAGATAAACAACAAACCAATAAATTTAAATTCGGGGAAACTATGAGTTCATTCTGTGAACAATATGGTTACCACCGTCTTACCCCACCATCTAGAGAAAGACGCAAAATTTATAAACAAAGTAGATTTTCACATCCACGTCCATATAGTAAAAACAAAAACTTTTCTAAAAAAATTTCGAACCCTTATTATACAACAAGCAGAATACCAAAAGATTCAACTAAGAAGGAAAAAATTATATGCTGGAAATGTAAAATATCAGGACATAAATCAACCGAATGTAAAATAAAAAAGAAAATTAATGAAATTTTCCACGATAACCAAGACATTAAAGAAAAATTAGAAAAACTACTTCTTTCAGAAACAGAAGATTCAGAAAAATTTAGTAATGAACCATCCTTAGATATTATAGAAGATCAAAGCGAATCATCATCTGA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold14_LTR-Caulimovirus_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

235

Start:

1134969  

End:

1135203

Strand:

+

>Thla_scaffold14_LTR-Caulimovirus_20

AAATTAAAAAATAATATTTATTAAAATTGAAGGATATAGTACACAAAGAAAATAAGCTATATACTCTAGAACCATTTAGCCTTAATAAAATACTTGAAAAATACCCTTCTCCAACATTATTTAAACAAGTAACTACTGGAGAACTACAAGGAGAAGTTAAAAATTTAAAAACTCAAGTAAAAGAACTACAACATATAGTTCATCAACAACAATTAGAACAACTGCAGATAAATAC