ID Class Order Superfamily Length Start End Strand View
Thla_scaffold10_LTR-Cassandra_1 RetrotransposonsLTRLTR-Cassandra2834504445326+
Thla_scaffold10_LTR-Cassandra_2 RetrotransposonsLTRLTR-Cassandra2905057550864+
Thla_scaffold10_LTR-Cassandra_3 RetrotransposonsLTRLTR-Cassandra995086550963+
Thla_scaffold10_LTR-Cassandra_4 RetrotransposonsLTRLTR-Cassandra2935097751269+
Thla_scaffold10_LTR-Cassandra_5 RetrotransposonsLTRLTR-Cassandra2905394854237+
Thla_scaffold10_LTR-Cassandra_6 RetrotransposonsLTRLTR-Cassandra995423854336+
Thla_scaffold10_LTR-Cassandra_7 RetrotransposonsLTRLTR-Cassandra3655435054714+
Thla_scaffold10_LTR-Cassandra_8 RetrotransposonsLTRLTR-Cassandra2908106781356+
Thla_scaffold10_LTR-Cassandra_9 RetrotransposonsLTRLTR-Cassandra978135981455+
Thla_scaffold10_LTR-Cassandra_10 RetrotransposonsLTRLTR-Cassandra3008146981768+
Thla_scaffold10_LTR-Cassandra_11 RetrotransposonsLTRLTR-Cassandra2888445784744+
Thla_scaffold10_LTR-Cassandra_12 RetrotransposonsLTRLTR-Cassandra978474784843+
Thla_scaffold10_LTR-Cassandra_13 RetrotransposonsLTRLTR-Cassandra3018485785157+
Thla_scaffold10_LTR-Cassandra_14 RetrotransposonsLTRLTR-Cassandra2638811588377+
Thla_scaffold10_LTR-Cassandra_15 RetrotransposonsLTRLTR-Cassandra978838088476+
Thla_scaffold10_LTR-Cassandra_16 RetrotransposonsLTRLTR-Cassandra3028849088791+
Thla_scaffold10_LTR-Cassandra_17 RetrotransposonsLTRLTR-Cassandra31419122371912550+
Thla_scaffold10_LTR-Cassandra_18 RetrotransposonsLTRLTR-Cassandra32219126981913019+
Thla_scaffold10_LTR-Cassandra_19 RetrotransposonsLTRLTR-Cassandra33221851402185471+
Thla_scaffold10_LTR-Cassandra_20 RetrotransposonsLTRLTR-Cassandra33321856142185946+

< 1 2 3 4 5 > Total 42


Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

283

Start:

45044  

End:

45326

Strand:

+

>Thla_scaffold10_LTR-Cassandra_1

ACCTATATCACCGAAGTGTATTTATCTTTTTAGTTACTTATCCGGAGAAAACTTAAAAGTTAAACGTGTTTGAGTTGAAGTTGCATTAAGATGGGTGACCTATCGGGAAGTGTTTCGGGTATCGTGTGAGTGAAGACAAACACAAGAAAAGATTGCATCATAATTGCAGAATCAATATTTCATGAAAATTGAACCTCTTGGCTAACGCACTTGGACAGATATGGAGCTCATGGGCCGAGAGAGGACGTAAGGGCACACTCCTAGAGTCGGTCCAGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

290

Start:

50575  

End:

50864

Strand:

+

>Thla_scaffold10_LTR-Cassandra_2

ACCTATATCACCAAAGTGTATTTATCTTTTTGGTTACTTGTCCAGAGAAAACTTTAAAGTTAAATGTGTTTGAGTTGAAGTTGCATTAAGATGGGTGACCTATCGGGAAGTGTTTTGGGTATCGTGTGAGTGAAGACAAAACACATGAAAAGATCGCGTCATAATTGTAGAATCAATATTTCATAACTTTCGAACCTTCTGGCTAACGCACCCGCTGTTGGACAGATATGTAGCCCATGGGCCGAGAGAGGACGTAAGGGCACACTCATAAAGTCGGTCCAGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

99

Start:

50865  

End:

50963

Strand:

+

>Thla_scaffold10_LTR-Cassandra_3

AGTGATATAAGAGTCAAACCAAGACGATAGTGTGGAGCCACAAAGGCTCACACCACCGGGAATGACGGCTCTGGTGCGCAGCGAGGACGTTACACTCTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

293

Start:

50977  

End:

51269

Strand:

+

>Thla_scaffold10_LTR-Cassandra_4

TGTAACATTCCGATTTAAGAAATATGAATATATATGTAGAAAGACTTAAAATAATTGATTTGGACACCTATGTTACAAAAGTGTACTTGTCTTTTTAGTCATTTGTCATGAACGTATTCCAAAATTAAACGTGTTTGAACTGAAATAGCTTTAGAATGGATGATTTACTGGGAAGAGATTTCCATTATAGTGTAAATAAGAACAAAACACAGGAAAATCGCGTTGTGATTACAAAATCAGTATTTCATGACTTTTAAATCTCTTGTCTAATACATCGACCATCAAACAGGAGT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

290

Start:

53948  

End:

54237

Strand:

+

>Thla_scaffold10_LTR-Cassandra_5

ATCTATGTCACCAAAGTGTATTTATCTTTTTGGTTACTTGTCCAGAGAAAACTTTAAAGTTAAACGTGTTTGAGTTGAAGTTGCATTAAGATGGGTGACCTATCTGGAAGTGTTTTGGATATTGTGTGAGTGAAGACAAAATACAGGAAAAGACCGCGTTATAATTGTAGAATCAATATTTCATTACTTTCGAACCTCCTAGCTAATGCACCCGCTATTAGACAGATATGGAGCCCATGGGCCGAGAGAGGACGTAAGGGCACACTCATACAGTCGGTCCAGGCGCTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

99

Start:

54238  

End:

54336

Strand:

+

>Thla_scaffold10_LTR-Cassandra_6

AGTGATATGAGAGTCAAACCAAGATGATAGTGTGGAGCCACAAAGGCTCACACCATCGGGAATGACGGCTTTGGTGCGCAGCGAGGACGTTGCACTCTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

54350  

End:

54714

Strand:

+

>Thla_scaffold10_LTR-Cassandra_7

TGTAACATTCTGATTTCAGAAATATGAATATATATGTGGAGAGACTTAAAATCATTGATTTGGATACATATGTTACCAAAGTGTACTTGTCTTTTTAGTCATTTGTCATGAACGTATTCCAAAATTAAACGTGTTTGAACTGAAATAGATTTAGAATGGATGATTTACCGGGAACTGATTTCCATTATAGTGTAAATAAGAACAAAACACAGGAAAATCGTGTTGTGATTACAAAATCAGTATTTCATGACTTTCAAATCTCTTGTCTAACACATTGACCATCAAACAGGAGTAGAGTCCACTACTAACTCATCAACCGTCATACATGAAAGAAGCCCATTGATAGAGTCGGCTGAAGCATTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

290

Start:

81067  

End:

81356

Strand:

+

>Thla_scaffold10_LTR-Cassandra_8

ATCTATGTCACCAAAGTGTATTTATCTTTTTGGTTACTTGTCCAGAGAAAACTTTAAAGTTAAATGTGTTTGAGTTGAAGTTGCATTAAGATGAGTGACCTATCTGGAAGTATTTTGGGTATTGTGTGAGTGAAGACAAAATACAGGAAAAGATCGCGTCATAATTGTAGAATCAGTATTTCATGATTTTTGAACCTCCTGGCTAATGCACCCGCTCTTGGACAGATATGGAGCCCATGGGCCGAGAGAGGACGTAAGGGCACACTCATACAGTCGGTCCAGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

81359  

End:

81455

Strand:

+

>Thla_scaffold10_LTR-Cassandra_9

TGATATAAGAGTCAAACCAAGACGATAGTGTGGAGCCACAAAGGCTCACACCATCGGGAATGACGGCTTTGGTGTGCAGCGAGGACGTTGCACTCTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

81469  

End:

81768

Strand:

+

>Thla_scaffold10_LTR-Cassandra_10

TGTAACATTCCGATTTCAGAAAAATGAATACATATGTGGAGAGACTTAAATCATTGATTTGGGTACCTATGTTACCAAAGTGTACTTGTCTTTTTAGTCATTTATCATGAACGTATTCCAAAATTAAACGTGTTTGAACTAAAACAGCTTTAGAATGGATGATTTACTGGGAAAGGATTTCCATTATAGTGTAAATAAGAACAAAACACAGGAAAATCGCGTAGTGATTACAAAATCAGTATTTCATGAATTTCAAATCTCTTGTCTATAACATCGACCATCAAACAGGAGTAGAGTCCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

288

Start:

84457  

End:

84744

Strand:

+

>Thla_scaffold10_LTR-Cassandra_11

ATCTATGTCACCAAAGTGTATTTATCTTTTTGGTTACTTGTCCAGAGAAAACTTTAAGTTAAATGTGTTTGAGTTGAAGTTGCATTAAGATGAGTGACCTATCTAGAAGTGTTTTGGGTATTGTGTGAGTGAAGACAAAATACAGGAAAAGATCGCGTCATAATTGTAGAATCAATATTTCATGACTTTCGAACCTCCTGGCTAATGCACCCGCTCTTGGACAGATATGGAGCCCATGGGCCGGAGAGGACATAAGGGCACACTCATACAGTCGGTTCAGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

84747  

End:

84843

Strand:

+

>Thla_scaffold10_LTR-Cassandra_12

TGATATAAGAGTCAAACCAAGACGATAGTGTGGAGCCACAAAGGCTCACACCATCGGGAATGACGGCTTTGGTGTGCAGCGAGGACGTTGCACTCTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

301

Start:

84857  

End:

85157

Strand:

+

>Thla_scaffold10_LTR-Cassandra_13

TGTAACATTTCGATTTCAGAAATATGAATACATATGTGGAGAGATTTAAAATCATTGATTTGGATACCTATGTTACCAAAATGTACTTGTCTTTTTAGTTATTTATCATGAACGTATTCCAAAATTAAACGTGTTTGAACTGAAATAGCTTTAGAATGGATGATTTACTGGGAAAGGATTTCCATTGTAGTGTAAATAAGAACAAAACACAAGAAAATCGCGTTGTGATTACAAAATGAGTATATCATGACTTTCAAATCTCTTGTCTAACACATCGACCATCAAACAGGAGTAGAGTCCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

263

Start:

88115  

End:

88377

Strand:

+

>Thla_scaffold10_LTR-Cassandra_14

ATCTATGTCACTAAAGTGTATTTATCTTTTTGGTTACTTGTCCACAGAAAACTTTAAAGTTAAATGTGTTTAAGTTGAAGTTGCATTAAGATGGGTACCTATAAGTGTTTTGGGTATCGTGTGAGTGAAGACAAAACACAGAAAAAGATTGCGTCATAATTTCTGAATCAATATTTCATGATTTTTGAACCTGGACAGATATGGAGCTCATGTGTCGAGAGAGGACGTAAGGGCACACTCATAAAGTTGGTCCAGACGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

88380  

End:

88476

Strand:

+

>Thla_scaffold10_LTR-Cassandra_15

TGATATCAGAGCCAAACCAAGACGATAGTGTGGAGCCACAAAGGCTCACACCATCGGGAATGACAGCCCTGGTGCGCAGCAATGACGTTGGGCTCTG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

302

Start:

88490  

End:

88791

Strand:

+

>Thla_scaffold10_LTR-Cassandra_16

TGTAACATTCCGATTTCAGAAATATTTATATATATGTAAAGAGATTTAAAATCATTGATTTGGATACCTATGTTACCAATGTGTACTTGTCTTTTTGGTCATTTGTCATGAACGTATTCCAAAATTAAACGTGTTTGAACTGGAATAGCATTAGAATGGATGATTTACTGGGAAGGGATTTCCATTATAGTGTGAATAAGATCAAAACACAGGAAAAATTGCGTTGTAATTACAAAATCAGTATTTCATGACTTTCAAATCTCTTGTCTTACACATCGACCATCAAACAGGAGTAGAGTCCA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

314

Start:

1912237  

End:

1912550

Strand:

+

>Thla_scaffold10_LTR-Cassandra_17

AAGTTTAAATATATTGATTTGGTTATTTAAGTTATTAAAATGTATTTATTTTTTCGGTTACTAGTTCTAAAAGAATTATACAGTTAAACATATTTGAACTGGAGCATGACTAAGATAAGTAATTTTTTGGGAAGTTGTTTCTAAAATTATATGAGTAAGGACATACAAGGAAAGATCGTGTGGTGATTACATGGTCGGTATGCATGACTTTCAAGCCTCCCAACTAACGCACTGACCATCAGACATGAATAAAACTCATGGGCCTAAGGGAGGACATGGATGTGCTTACCGATAGGGGCGGTCAGGGCGTTATA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

322

Start:

1912698  

End:

1913019

Strand:

+

>Thla_scaffold10_LTR-Cassandra_18

CATTTGAATAAATTTAAATGAATTTATTTGGCTACCTATATCACCAAAGTACACTTATCTTTTCGATCTCTAGTCCCGAAAAAACTTTATAGTTTAGCGTGCTTGAGCTGGAACAGGATTATGATGAGTGACCTTTCAGAAAGTGATTTTTAAAATCATATGAGTGAGGACAAAACACAGGGAAAATGGCGTAGTAATTGCAGAGTCAATATTTCATGATTTTCGAATTTTTCGATTAATGCACCGAACATTGAATATAAATAGGGCTCACAAGCTTAAGAGAAGATGTGAATGTGCTTACCGATAGGGGCGGTAGGGGCGT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

2185140  

End:

2185471

Strand:

+

>Thla_scaffold10_LTR-Cassandra_19

TAGTCCATTTGAATAAGTTTAAATGGATTGATTTGGCTATCTATGTCATCAAAGTGCATTTATCTTTTCAGTCACAAGTCCCGAGAGAACTCTACAGTTAAGGGTGCTTATTCTGGAGTAGGACTAGGATGGGTGACCTTTCGGGAAGTGATTCCCGAAACCGTGTGAGTGAAGCCAAAACACGGGAAAAGATCATGTGGTGATTGCAAGGTCAGTAAATAAGTCGGTTGGGCTTTGGAAAAAATAACGCACTGACCGTCGGACAGGGCGGGGCCCACGAGCCCGACAAAGGGATGGGTGACTCGCCGAAATGGGCAGTCGGGAGCATTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold10_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

2185614  

End:

2185946

Strand:

+

>Thla_scaffold10_LTR-Cassandra_20

TGGCCTATTTGAATAAGTTTAAATTGATTGATTTGGCAACCTATGTCATCAAAGTACACTTATCTTTTCGGTCACAAGTCCTGAGAGAACTCCACAGTTAAGGGTGTTTGTCCTGGAGTAGGACTAGGATGGGTGACCTTTCAGGAAGTGATTCTCAAAACTGTGTAAGTGAGGTCAAAACACGGAGAAAGATCATGTGGTGATTGCAGGATCAGTAAATAAGTCGATTGGGCTCTGGGAAAAATAACGCATTGACCGTCGGACAAGAGCGGGGCCCACAAATCCAACAGAGGGATAAGTGACTTGCCGAAATGGGCGGTCGAAGATGTTACA